Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411000 | sp|Q0WT48|DNJ21_ARATH | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411000 | A0A396JBB3 | 99.124 | 685 | 6 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa1411000 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa0002680 | Msa1411000 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
| Msa0010910 | Msa1411000 | 0.840080 | 1.078128e-57 | -8.615850e-47 |
| Msa0016540 | Msa1411000 | 0.842084 | 3.208409e-58 | -8.615850e-47 |
| Msa0036880 | Msa1411000 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
| Msa0041690 | Msa1411000 | 0.831754 | 1.395129e-55 | -8.615850e-47 |
| Msa0047640 | Msa1411000 | 0.840307 | 9.407682e-58 | -8.615850e-47 |
| Msa0054530 | Msa1411000 | 0.818688 | 1.720153e-52 | -8.615850e-47 |
| Msa0089980 | Msa1411000 | 0.836817 | 7.491062e-57 | -8.615850e-47 |
| Msa0090010 | Msa1411000 | 0.829827 | 4.139273e-55 | -8.615850e-47 |
| Msa0092940 | Msa1411000 | 0.807964 | 3.908741e-50 | -8.615850e-47 |
| Msa0106620 | Msa1411000 | 0.859127 | 5.126630e-63 | -8.615850e-47 |
| Msa0106710 | Msa1411000 | 0.837679 | 4.509330e-57 | -8.615850e-47 |
| Msa0116790 | Msa1411000 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa1356610 | Msa1411000 | 0.813992 | 1.932753e-51 | -8.615850e-47 |
| Msa1366550 | Msa1411000 | 0.836912 | 7.086569e-57 | -8.615850e-47 |
| Msa1370590 | Msa1411000 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa1373850 | Msa1411000 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
| Msa1384100 | Msa1411000 | 0.807826 | 4.181619e-50 | -8.615850e-47 |
| Msa1393820 | Msa1411000 | 0.834465 | 2.951588e-56 | -8.615850e-47 |
| Msa1409950 | Msa1411000 | 0.804812 | 1.805299e-49 | -8.615850e-47 |
| Msa1411000 | Msa1411950 | 0.823549 | 1.304857e-53 | -8.615850e-47 |
| Msa1411000 | Msa1418240 | 0.800581 | 1.347439e-48 | -8.615850e-47 |
| Msa1411000 | Msa1426910 | 0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa1411000 | Msa1434090 | 0.809178 | 2.150943e-50 | -8.615850e-47 |
| Msa1411000 | Msa1440900 | 0.820690 | 6.003915e-53 | -8.615850e-47 |
| Msa1411000 | Msa1443310 | 0.836472 | 9.172441e-57 | -8.615850e-47 |
| Msa1411000 | Msa1444120 | 0.812066 | 5.110074e-51 | -8.615850e-47 |
| Msa1411000 | Msa1446080 | 0.801008 | 1.102443e-48 | -8.615850e-47 |
| Msa1411000 | Msa1450720 | 0.820311 | 7.335741e-53 | -8.615850e-47 |
| Msa1411000 | Msa1461370 | 0.824991 | 5.979270e-54 | -8.615850e-47 |
| Msa1411000 | Msa1463030 | 0.832313 | 1.014913e-55 | -8.615850e-47 |
| Msa1411000 | Msa1464090 | 0.802535 | 5.357595e-49 | -8.615850e-47 |
| Msa0607320 | Msa1411000 | 0.805896 | 1.069637e-49 | -8.615850e-47 |
| Msa0608270 | Msa1411000 | 0.822587 | 2.187716e-53 | -8.615850e-47 |
| Msa0622120 | Msa1411000 | 0.800934 | 1.141667e-48 | -8.615850e-47 |
| Msa0624940 | Msa1411000 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0626270 | Msa1411000 | 0.859850 | 3.108734e-63 | -8.615850e-47 |
| Msa0626460 | Msa1411000 | 0.835572 | 1.552408e-56 | -8.615850e-47 |
| Msa0628420 | Msa1411000 | 0.817906 | 2.585476e-52 | -8.615850e-47 |
| Msa0640940 | Msa1411000 | 0.806896 | 6.582787e-50 | -8.615850e-47 |
| Msa0648830 | Msa1411000 | 0.824702 | 6.993255e-54 | -8.615850e-47 |
| Msa0651560 | Msa1411000 | 0.838708 | 2.449751e-57 | -8.615850e-47 |
| Msa0662890 | Msa1411000 | 0.801239 | 9.888534e-49 | -8.615850e-47 |
| Msa0664540 | Msa1411000 | 0.867423 | 1.383470e-65 | -8.615850e-47 |
| Msa0691340 | Msa1411000 | 0.808263 | 3.375314e-50 | -8.615850e-47 |
| Msa0693330 | Msa1411000 | 0.807119 | 5.905302e-50 | -8.615850e-47 |
| Msa0698100 | Msa1411000 | 0.851104 | 1.102487e-60 | -8.615850e-47 |
| Msa0702720 | Msa1411000 | 0.825496 | 4.541696e-54 | -8.615850e-47 |
| Msa0703800 | Msa1411000 | 0.805878 | 1.079302e-49 | -8.615850e-47 |
| Msa0709120 | Msa1411000 | 0.800170 | 1.634468e-48 | -8.615850e-47 |
| Msa0735550 | Msa1411000 | 0.815430 | 9.280556e-52 | -8.615850e-47 |
| Msa0743530 | Msa1411000 | 0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0756380 | Msa1411000 | 0.802967 | 4.363639e-49 | -8.615850e-47 |
| Msa0789560 | Msa1411000 | 0.857284 | 1.812607e-62 | -8.615850e-47 |
| Msa0790410 | Msa1411000 | 0.815283 | 1.000813e-51 | -8.615850e-47 |
| Msa0791090 | Msa1411000 | 0.823603 | 1.267334e-53 | -8.615850e-47 |
| Msa0796300 | Msa1411000 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa0124320 | Msa1411000 | 0.819213 | 1.307248e-52 | -8.615850e-47 |
| Msa0126790 | Msa1411000 | 0.822344 | 2.491557e-53 | -8.615850e-47 |
| Msa0130720 | Msa1411000 | 0.806848 | 6.740520e-50 | -8.615850e-47 |
| Msa0131700 | Msa1411000 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
| Msa0139670 | Msa1411000 | 0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa0140880 | Msa1411000 | 0.808637 | 2.808658e-50 | -8.615850e-47 |
| Msa0141400 | Msa1411000 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa0171870 | Msa1411000 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0188700 | Msa1411000 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0192640 | Msa1411000 | 0.803563 | 3.284547e-49 | -8.615850e-47 |
| Msa0206330 | Msa1411000 | 0.803075 | 4.144344e-49 | -8.615850e-47 |
| Msa0220730 | Msa1411000 | 0.827941 | 1.184793e-54 | -8.615850e-47 |
| Msa0223330 | Msa1411000 | 0.810206 | 1.293372e-50 | -8.615850e-47 |
| Msa0225480 | Msa1411000 | 0.800788 | 1.222850e-48 | -8.615850e-47 |
| Msa0227330 | Msa1411000 | 0.826844 | 2.170939e-54 | -8.615850e-47 |
| Msa0231190 | Msa1411000 | 0.839895 | 1.204865e-57 | -8.615850e-47 |
| Msa1234620 | Msa1411000 | 0.811126 | 8.183797e-51 | -8.615850e-47 |
| Msa1254620 | Msa1411000 | 0.829527 | 4.896223e-55 | -8.615850e-47 |
| Msa1259640 | Msa1411000 | 0.831063 | 2.064319e-55 | -8.615850e-47 |
| Msa1271130 | Msa1411000 | 0.822195 | 2.697491e-53 | -8.615850e-47 |
| Msa1283740 | Msa1411000 | 0.802613 | 5.163208e-49 | -8.615850e-47 |
| Msa1292020 | Msa1411000 | 0.814864 | 1.240098e-51 | -8.615850e-47 |
| Msa1293400 | Msa1411000 | 0.810893 | 9.191725e-51 | -8.615850e-47 |
| Msa1297530 | Msa1411000 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa1329790 | Msa1411000 | 0.835640 | 1.492091e-56 | -8.615850e-47 |
| Msa1336040 | Msa1411000 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa1340200 | Msa1411000 | 0.827227 | 1.757927e-54 | -8.615850e-47 |
| Msa1341840 | Msa1411000 | 0.802474 | 5.514211e-49 | -8.615850e-47 |
| Msa1344310 | Msa1411000 | 0.829604 | 4.690086e-55 | -8.615850e-47 |
| Msa0373880 | Msa1411000 | 0.811205 | 7.865926e-51 | -8.615850e-47 |
| Msa0376420 | Msa1411000 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0382370 | Msa1411000 | 0.813680 | 2.264629e-51 | -8.615850e-47 |
| Msa0385830 | Msa1411000 | 0.806959 | 6.383992e-50 | -8.615850e-47 |
| Msa0389410 | Msa1411000 | 0.933904 | 9.203887e-96 | -8.615850e-47 |
| Msa0390480 | Msa1411000 | 0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0395980 | Msa1411000 | 0.867989 | 9.111165e-66 | -8.615850e-47 |
| Msa0402190 | Msa1411000 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa0423030 | Msa1411000 | 0.827486 | 1.523613e-54 | -8.615850e-47 |
| Msa0432160 | Msa1411000 | 0.812173 | 4.842631e-51 | -8.615850e-47 |
| Msa0440510 | Msa1411000 | 0.859693 | 3.467346e-63 | -8.615850e-47 |
| Msa0450400 | Msa1411000 | -0.853413 | 2.429288e-61 | -8.615850e-47 |
| Msa0468250 | Msa1411000 | 0.818201 | 2.217761e-52 | -8.615850e-47 |
| Msa0476680 | Msa1411000 | 0.815962 | 7.065636e-52 | -8.615850e-47 |
| Msa0985220 | Msa1411000 | 0.835296 | 1.822737e-56 | -8.615850e-47 |
| Msa1002960 | Msa1411000 | 0.819880 | 9.205698e-53 | -8.615850e-47 |
| Msa1027360 | Msa1411000 | 0.803440 | 3.482102e-49 | -8.615850e-47 |
| Msa1031390 | Msa1411000 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa1037520 | Msa1411000 | 0.806881 | 6.631401e-50 | -8.615850e-47 |
| Msa1072600 | Msa1411000 | 0.835038 | 2.117720e-56 | -8.615850e-47 |
| Msa1088410 | Msa1411000 | 0.801255 | 9.816288e-49 | -8.615850e-47 |
| Msa1089960 | Msa1411000 | 0.841627 | 4.236745e-58 | -8.615850e-47 |
| Msa1095790 | Msa1411000 | 0.847586 | 1.053299e-59 | -8.615850e-47 |
| Msa0240650 | Msa1411000 | 0.803736 | 3.023090e-49 | -8.615850e-47 |
| Msa0241830 | Msa1411000 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0244970 | Msa1411000 | 0.872173 | 3.898312e-67 | -8.615850e-47 |
| Msa0244980 | Msa1411000 | 0.806620 | 7.528052e-50 | -8.615850e-47 |
| Msa0249310 | Msa1411000 | 0.862708 | 4.185463e-64 | -8.615850e-47 |
| Msa0279850 | Msa1411000 | 0.810914 | 9.094842e-51 | -8.615850e-47 |
| Msa0283420 | Msa1411000 | 0.812500 | 4.110105e-51 | -8.615850e-47 |
| Msa0287790 | Msa1411000 | 0.842832 | 2.031795e-58 | -8.615850e-47 |
| Msa0296790 | Msa1411000 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0302570 | Msa1411000 | 0.803400 | 3.549711e-49 | -8.615850e-47 |
| Msa0304570 | Msa1411000 | 0.809808 | 1.575541e-50 | -8.615850e-47 |
| Msa0307860 | Msa1411000 | 0.820820 | 5.605486e-53 | -8.615850e-47 |
| Msa0321690 | Msa1411000 | 0.841315 | 5.120388e-58 | -8.615850e-47 |
| Msa0322900 | Msa1411000 | 0.835122 | 2.016461e-56 | -8.615850e-47 |
| Msa0358400 | Msa1411000 | 0.820956 | 5.215771e-53 | -8.615850e-47 |
| Msa0361850 | Msa1411000 | 0.808959 | 2.396340e-50 | -8.615850e-47 |
| Msa0362890 | Msa1411000 | 0.851669 | 7.635803e-61 | -8.615850e-47 |
| Msa0363060 | Msa1411000 | 0.835802 | 1.357216e-56 | -8.615850e-47 |
| Msa1123350 | Msa1411000 | 0.806535 | 7.847971e-50 | -8.615850e-47 |
| Msa1127430 | Msa1411000 | 0.808263 | 3.375314e-50 | -8.615850e-47 |
| Msa1133590 | Msa1411000 | 0.804384 | 2.217226e-49 | -8.615850e-47 |
| Msa1161480 | Msa1411000 | 0.805466 | 1.317249e-49 | -8.615850e-47 |
| Msa1201640 | Msa1411000 | 0.824199 | 9.187824e-54 | -8.615850e-47 |
| Msa1205480 | Msa1411000 | 0.820132 | 8.061586e-53 | -8.615850e-47 |
| Msa1205590 | Msa1411000 | 0.824992 | 5.975177e-54 | -8.615850e-47 |
| Msa1208790 | Msa1411000 | 0.807998 | 3.843661e-50 | -8.615850e-47 |
| Msa1211340 | Msa1411000 | 0.836567 | 8.678281e-57 | -8.615850e-47 |
| Msa0482940 | Msa1411000 | 0.808969 | 2.384537e-50 | -8.615850e-47 |
| Msa0491000 | Msa1411000 | 0.864586 | 1.093291e-64 | -8.615850e-47 |
| Msa0513370 | Msa1411000 | 0.817519 | 3.162657e-52 | -8.615850e-47 |
| Msa0516120 | Msa1411000 | 0.804796 | 1.819020e-49 | -8.615850e-47 |
| Msa0516240 | Msa1411000 | 0.811908 | 5.533584e-51 | -8.615850e-47 |
| Msa0518030 | Msa1411000 | 0.802212 | 6.243570e-49 | -8.615850e-47 |
| Msa0519150 | Msa1411000 | 0.802367 | 5.801495e-49 | -8.615850e-47 |
| Msa0521010 | Msa1411000 | 0.816235 | 6.139050e-52 | -8.615850e-47 |
| Msa0526020 | Msa1411000 | 0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0529670 | Msa1411000 | 0.821472 | 3.965265e-53 | -8.615850e-47 |
| Msa0531250 | Msa1411000 | 0.830166 | 3.422275e-55 | -8.615850e-47 |
| Msa0534980 | Msa1411000 | 0.815002 | 1.155387e-51 | -8.615850e-47 |
| Msa0544730 | Msa1411000 | 0.834478 | 2.928036e-56 | -8.615850e-47 |
| Msa0553200 | Msa1411000 | 0.805924 | 1.055386e-49 | -8.615850e-47 |
| Msa0572750 | Msa1411000 | 0.841046 | 6.023108e-58 | -8.615850e-47 |
| Msa0586450 | Msa1411000 | 0.801671 | 8.066907e-49 | -8.615850e-47 |
| Msa0588090 | Msa1411000 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0597770 | Msa1411000 | 0.846776 | 1.756060e-59 | -8.615850e-47 |
| Msa0855870 | Msa1411000 | 0.820901 | 5.367619e-53 | -8.615850e-47 |
| Msa0870650 | Msa1411000 | 0.804011 | 2.650668e-49 | -8.615850e-47 |
| Msa0883520 | Msa1411000 | 0.807437 | 5.058086e-50 | -8.615850e-47 |
| Msa0892640 | Msa1411000 | 0.823451 | 1.375746e-53 | -8.615850e-47 |
| Msa0903780 | Msa1411000 | 0.813907 | 2.017735e-51 | -8.615850e-47 |
| Msa0933760 | Msa1411000 | 0.841847 | 3.707651e-58 | -8.615850e-47 |
| Msa0934140 | Msa1411000 | 0.815355 | 9.646769e-52 | -8.615850e-47 |
| Msa0959520 | Msa1411000 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0969330 | Msa1411000 | 0.813624 | 2.329130e-51 | -8.615850e-47 |
| Msa0971650 | Msa1411000 | 0.854844 | 9.392195e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411000 | MtrunA17_Chr2g0301881 | 99.124 | 685 | 6 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1417 |
| Msa1411000 | MtrunA17_Chr2g0312441 | 23.711 | 388 | 215 | 12 | 223 | 606 | 1869 | 2179 | 4.47e-21 | 99.0 |
| Msa1411000 | MtrunA17_Chr4g0003841 | 24.044 | 366 | 197 | 13 | 245 | 606 | 1845 | 2133 | 1.29e-17 | 87.8 |
| Msa1411000 | MtrunA17_Chr7g0242951 | 35.849 | 106 | 61 | 2 | 68 | 173 | 2 | 100 | 4.45e-14 | 75.5 |
| Msa1411000 | MtrunA17_Chr1g0206121 | 43.820 | 89 | 48 | 2 | 80 | 167 | 16 | 103 | 1.43e-13 | 72.0 |
| Msa1411000 | MtrunA17_Chr7g0269841 | 46.575 | 73 | 37 | 2 | 93 | 164 | 20 | 91 | 1.53e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411000 | AT1G79940.2 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa1411000 | AT1G79940.3 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa1411000 | AT1G79940.1 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa1411000 | AT1G79940.4 | 79.359 | 562 | 116 | 0 | 1 | 562 | 1 | 562 | 0.0 | 966 |
| Msa1411000 | AT4G21180.1 | 68.085 | 611 | 189 | 3 | 1 | 611 | 1 | 605 | 0.0 | 890 |
| Msa1411000 | AT4G21180.2 | 68.550 | 531 | 161 | 3 | 81 | 611 | 1 | 525 | 0.0 | 776 |
| Msa1411000 | AT1G20960.1 | 25.945 | 397 | 212 | 13 | 223 | 615 | 1850 | 2168 | 2.83e-23 | 106 |
| Msa1411000 | AT1G20960.2 | 25.945 | 397 | 212 | 13 | 223 | 615 | 1850 | 2168 | 2.83e-23 | 106 |
| Msa1411000 | AT3G08970.1 | 42.308 | 78 | 44 | 1 | 99 | 176 | 27 | 103 | 9.86e-13 | 71.6 |
| Msa1411000 | AT3G08970.2 | 42.308 | 78 | 44 | 1 | 99 | 176 | 27 | 103 | 9.86e-13 | 71.6 |
| Msa1411000 | AT1G61770.1 | 49.206 | 63 | 31 | 1 | 99 | 161 | 34 | 95 | 3.27e-11 | 65.5 |
Find 189 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGTCAATATGAAAAT+TGG | 0.118226 | tig0023712:+70961 | None:intergenic |
| AAGTATGGAAAATGAGTTTA+AGG | 0.167473 | tig0023712:-65599 | Msa1411000:three_prime_UTR |
| ATGCTTGGATTAATAATAAA+AGG | 0.173947 | tig0023712:-66442 | Msa1411000:CDS |
| TGGCACTAGGGCTGCTGTTT+TGG | 0.177838 | tig0023712:-66030 | Msa1411000:CDS |
| TTCACAAGGAAGAGAATTTC+TGG | 0.179925 | tig0023712:-66373 | Msa1411000:CDS |
| TTTGATCCATTTAGTATTCT+TGG | 0.208184 | tig0023712:-70419 | Msa1411000:CDS |
| GCTCAGTTGACTCGTGAATT+TGG | 0.213919 | tig0023712:-69045 | Msa1411000:CDS |
| AAGTGATTTCAGACGGATTT+TGG | 0.235201 | tig0023712:-69001 | Msa1411000:CDS |
| GTGAATGCTCTTCGATTTCT+TGG | 0.238160 | tig0023712:+70888 | None:intergenic |
| TTGGGTGATTATGATTATTC+TGG | 0.255271 | tig0023712:-70641 | Msa1411000:CDS |
| TAACAACAGACTCAGTAATA+TGG | 0.262837 | tig0023712:+67084 | None:intergenic |
| TGAGTTTAAGGATTAAATTT+TGG | 0.269827 | tig0023712:-65587 | Msa1411000:three_prime_UTR |
| GCAGAAGGTAAGAACATTTC+AGG | 0.270069 | tig0023712:-66645 | Msa1411000:intron |
| CACAACTTTGTTATCGTATA+CGG | 0.271611 | tig0023712:+70922 | None:intergenic |
| TGCTTCGGCAACTGCCTTAC+TGG | 0.280590 | tig0023712:+66211 | None:intergenic |
| TTACTTCATGAAGCCTTCTT+TGG | 0.292359 | tig0023712:-69498 | Msa1411000:CDS |
| TTGATGCATCACATAGTTTC+CGG | 0.324576 | tig0023712:+69538 | None:intergenic |
| CTGAATATTGATGGGGCATC+TGG | 0.326145 | tig0023712:-69650 | Msa1411000:CDS |
| AGCAAGAGCAGGCCAAGTTT+TGG | 0.339056 | tig0023712:-69231 | Msa1411000:CDS |
| AAATTCTCTTCCTTGTGAAA+TGG | 0.342000 | tig0023712:+66377 | None:intergenic |
| CTTGACATTGTTACTGCTTT+GGG | 0.342791 | tig0023712:-70659 | Msa1411000:CDS |
| TGCTGTAACTGCTGCTTCTA+AGG | 0.343287 | tig0023712:-66279 | Msa1411000:CDS |
| TCTAATCCAAGAATACTAAA+TGG | 0.344969 | tig0023712:+70413 | None:intergenic |
| ACTTGACATTGTTACTGCTT+TGG | 0.348421 | tig0023712:-70660 | Msa1411000:CDS |
| CTGCCTTACTGGTCTCCTTC+GGG | 0.350492 | tig0023712:+66222 | None:intergenic |
| CGTGAAAACTACGAGAAATA+TGG | 0.363001 | tig0023712:-70139 | Msa1411000:CDS |
| ACTGCCTTACTGGTCTCCTT+CGG | 0.364831 | tig0023712:+66221 | None:intergenic |
| CAATTCCTTCTGAATATTGA+TGG | 0.365311 | tig0023712:-69659 | Msa1411000:CDS |
| TTATCTGAAACATTAAAGTA+TGG | 0.366856 | tig0023712:-65614 | Msa1411000:three_prime_UTR |
| ATTGGTAATGGGCAAGTTCC+AGG | 0.367032 | tig0023712:-66162 | Msa1411000:CDS |
| CATGGGGAAGGGCCGCAATC+AGG | 0.368067 | tig0023712:+66411 | None:intergenic |
| TGCAATGACTGCTCTCGATC+AGG | 0.368636 | tig0023712:-70859 | Msa1411000:CDS |
| TTTATTGCAGGGATTTCAAA+TGG | 0.379260 | tig0023712:-69696 | Msa1411000:intron |
| TGATCTCACCCTTTGAAAGA+TGG | 0.379492 | tig0023712:+70822 | None:intergenic |
| TAAGGCAATTGCAGAATCTA+AGG | 0.382179 | tig0023712:-66261 | Msa1411000:CDS |
| AATTCTCTTCCTTGTGAAAT+GGG | 0.386027 | tig0023712:+66378 | None:intergenic |
| GTTATCGTATACGGAACTAT+AGG | 0.388065 | tig0023712:+70931 | None:intergenic |
| GTTAGCGACAATGGCGGCTT+CGG | 0.394641 | tig0023712:-71004 | Msa1411000:exon |
| GGCGAAGCAGCTGAAAGTTC+TGG | 0.395830 | tig0023712:-65846 | Msa1411000:CDS |
| TCATGATATCAGCTAAATAA+AGG | 0.399212 | tig0023712:+65650 | None:intergenic |
| AAATGGGTAGTGAGGGGCAT+GGG | 0.401841 | tig0023712:+66394 | None:intergenic |
| TGAAGCCTTCTTTGGCCCCT+AGG | 0.405088 | tig0023712:-69490 | Msa1411000:intron |
| AACAACAGACTCAGTAATAT+GGG | 0.413471 | tig0023712:+67085 | None:intergenic |
| AAACGTCTTCAACCTGGGTC+TGG | 0.414315 | tig0023712:+70317 | None:intergenic |
| AATAAGAATCAAGCTGCTAA+TGG | 0.416100 | tig0023712:-65885 | Msa1411000:CDS |
| GTCCATCTTAGTTTATCTGT+TGG | 0.416909 | tig0023712:-65703 | Msa1411000:three_prime_UTR |
| GAGCTATGAAAGTTAAGAAA+AGG | 0.417789 | tig0023712:-71767 | None:intergenic |
| GGTAGTGAGGGGCATGGGGA+AGG | 0.423708 | tig0023712:+66399 | None:intergenic |
| TCATCATCGGTCCTTCGAAC+TGG | 0.424462 | tig0023712:+69316 | None:intergenic |
| CCCTTTGAAAGATGGATTTG+CGG | 0.426443 | tig0023712:+70830 | None:intergenic |
| AACGAACCCGGGCTGGCACT+AGG | 0.426633 | tig0023712:-66043 | Msa1411000:CDS |
| CAGCAGCCCTAGTGCCAGCC+CGG | 0.428229 | tig0023712:+66036 | None:intergenic |
| AACTTAGAAGCGTCCGAAAA+CGG | 0.430251 | tig0023712:+65556 | None:intergenic |
| ATTTCAGACTCTGCTGCGCC+AGG | 0.431081 | tig0023712:+70389 | None:intergenic |
| TTTATTACCTGTCTGCCATC+AGG | 0.432063 | tig0023712:+70112 | None:intergenic |
| TGTTGGACTACATTCATACT+TGG | 0.432457 | tig0023712:-65686 | Msa1411000:three_prime_UTR |
| GGCTGATGAGGGACCTATCA+TGG | 0.435870 | tig0023712:-66009 | Msa1411000:CDS |
| GCAGCATCCTGCACTAGTTA+AGG | 0.437254 | tig0023712:-69206 | Msa1411000:intron |
| CACAAAGGCTGCTGAATACA+TGG | 0.438061 | tig0023712:-69344 | Msa1411000:CDS |
| GGATGAGGACAATGAGGATG+AGG | 0.438409 | tig0023712:-65970 | Msa1411000:CDS |
| GCAGAATCTAAGGAGGGTTC+CGG | 0.443562 | tig0023712:-66251 | Msa1411000:CDS |
| TGCTTGGATTAATAATAAAA+GGG | 0.445011 | tig0023712:-66441 | Msa1411000:CDS |
| GCTATTGTTTGTGCGACTCT+TGG | 0.446942 | tig0023712:-66109 | Msa1411000:CDS |
| TTATTGTCAATATGAAAATT+GGG | 0.448562 | tig0023712:+70962 | None:intergenic |
| TACTGAGTCTGTTGTTAAGA+AGG | 0.450238 | tig0023712:-67078 | Msa1411000:CDS |
| ATATGGGGCAGCTGCAGAAA+TGG | 0.450567 | tig0023712:+67101 | None:intergenic |
| AGCTATGAAAGTTAAGAAAA+GGG | 0.455787 | tig0023712:-71766 | None:intergenic |
| CTGAAATCACTTGCTAAAGA+TGG | 0.456602 | tig0023712:+69012 | None:intergenic |
| TTGTTTGTGCGACTCTTGGT+TGG | 0.457161 | tig0023712:-66105 | Msa1411000:CDS |
| ATTAATAATAAAAGGGGTAA+TGG | 0.462801 | tig0023712:-66434 | Msa1411000:CDS |
| TGTTTGTGCGACTCTTGGTT+GGG | 0.464424 | tig0023712:-66104 | Msa1411000:CDS |
| AGGATGCTGCTTCCAAAACT+TGG | 0.469816 | tig0023712:+69219 | None:intergenic |
| TATTTGCATTCTCTTGCCAT+TGG | 0.470723 | tig0023712:-69600 | Msa1411000:CDS |
| GGTCTCCTTCGGGCTTGCTC+CGG | 0.476446 | tig0023712:+66232 | None:intergenic |
| AATTCCTTCTGAATATTGAT+GGG | 0.478300 | tig0023712:-69658 | Msa1411000:CDS |
| AGTTATACCACGGAATGCTC+AGG | 0.478686 | tig0023712:-68022 | Msa1411000:CDS |
| TACCTTTCACAGTTGAATTG+AGG | 0.484964 | tig0023712:+71659 | None:intergenic |
| CTTCACCTTCTCCACTGCTT+CGG | 0.486591 | tig0023712:+66196 | None:intergenic |
| AGTATTCTTGGATTAGAGCC+TGG | 0.492053 | tig0023712:-70407 | Msa1411000:CDS |
| TTTAGGTTGTTGGGTACTGA+AGG | 0.493682 | tig0023712:-71026 | Msa1411000:five_prime_UTR |
| AAGGTTAGTTTCATGGATGA+AGG | 0.496224 | tig0023712:-66305 | Msa1411000:CDS |
| GCTCTTGCTTAATGTTCTTG+AGG | 0.496316 | tig0023712:+69245 | None:intergenic |
| AGTTACCCTCTGATGGGGCC+TGG | 0.496798 | tig0023712:+66144 | None:intergenic |
| CCACGGAATGCTCAGGGACA+TGG | 0.499438 | tig0023712:-68015 | Msa1411000:CDS |
| ACTCTTGGTTGGGCTGTGAC+AGG | 0.500034 | tig0023712:-66094 | Msa1411000:CDS |
| GAAGCAGTGGAGAAGGTGAA+GGG | 0.502372 | tig0023712:-66194 | Msa1411000:CDS |
| AGTTGCCGAAGCAGTGGAGA+AGG | 0.504802 | tig0023712:-66201 | Msa1411000:CDS |
| GTAGTGAGGGGCATGGGGAA+GGG | 0.505396 | tig0023712:+66400 | None:intergenic |
| CTTCATGAAGTAATAGTAAG+TGG | 0.505667 | tig0023712:+69508 | None:intergenic |
| AAATTATAGTTACCCTCTGA+TGG | 0.507044 | tig0023712:+66137 | None:intergenic |
| TCCTTGTGAAATGGGTAGTG+AGG | 0.507052 | tig0023712:+66386 | None:intergenic |
| TCGACTCCATCCTCCATGAT+AGG | 0.507260 | tig0023712:+65996 | None:intergenic |
| AGAAATGGTGCAATGCCTTC+AGG | 0.508926 | tig0023712:+67116 | None:intergenic |
| TCAATATTCAGAAGGAATTG+AGG | 0.511132 | tig0023712:+69662 | None:intergenic |
| CAATATTCAGAAGGAATTGA+GGG | 0.516320 | tig0023712:+69663 | None:intergenic |
| TAAGGCAGTTGCCGAAGCAG+TGG | 0.517068 | tig0023712:-66207 | Msa1411000:CDS |
| CCTTCATTAGCTCTTCGAGC+AGG | 0.522999 | tig0023712:+68965 | None:intergenic |
| CAGTCTCACATGTTACATCA+AGG | 0.523409 | tig0023712:+66507 | None:intergenic |
| GGATGGAGTCGAGGAGGATG+AGG | 0.525475 | tig0023712:-65985 | Msa1411000:CDS |
| CTTTGTCGAGCACATTGCTA+AGG | 0.526153 | tig0023712:-70191 | Msa1411000:CDS |
| ACGAACCCGGGCTGGCACTA+GGG | 0.527894 | tig0023712:-66042 | Msa1411000:CDS |
| TAAGATACCTTAACTAGTGC+AGG | 0.529625 | tig0023712:+69199 | None:intergenic |
| ATTTCAGGAACTTTATGAGA+TGG | 0.531199 | tig0023712:-66630 | Msa1411000:CDS |
| TGGCCATCCTGATGGCAGAC+AGG | 0.531999 | tig0023712:-70119 | Msa1411000:intron |
| ACATTGTTACCATCCATGCT+TGG | 0.533449 | tig0023712:-66457 | Msa1411000:CDS |
| GTCCAACAGATAAACTAAGA+TGG | 0.534613 | tig0023712:+65701 | None:intergenic |
| TCAAGATCATCAAAGTATAC+CGG | 0.535024 | tig0023712:-69557 | Msa1411000:CDS |
| AAGCCCGAAGGAGACCAGTA+AGG | 0.539611 | tig0023712:-66225 | Msa1411000:CDS |
| CCGCAAATCCATCTTTCAAA+GGG | 0.541187 | tig0023712:-70830 | Msa1411000:intron |
| TTATTGCAGGGATTTCAAAT+GGG | 0.542722 | tig0023712:-69695 | Msa1411000:intron |
| AATGGGTAGTGAGGGGCATG+GGG | 0.542912 | tig0023712:+66395 | None:intergenic |
| ACCGCAAATCCATCTTTCAA+AGG | 0.546433 | tig0023712:-70831 | Msa1411000:CDS |
| AGCAGCCCTAGTGCCAGCCC+GGG | 0.546721 | tig0023712:+66037 | None:intergenic |
| TGTTAAGAAGGTGGCCCGTA+AGG | 0.547535 | tig0023712:-67066 | Msa1411000:intron |
| CTTTAGCAAGTGATTTCAGA+CGG | 0.548542 | tig0023712:-69008 | Msa1411000:CDS |
| AGCTCAACCACACCGATCGC+AGG | 0.549171 | tig0023712:+67982 | None:intergenic |
| GAGCTACTTACTCAAACAGC+AGG | 0.550361 | tig0023712:-66590 | Msa1411000:CDS |
| AATATTGATGGGGCATCTGG+TGG | 0.550386 | tig0023712:-69647 | Msa1411000:CDS |
| CAAGTTCCAGGCCCCATCAG+AGG | 0.551524 | tig0023712:-66150 | Msa1411000:CDS |
| CCTTGTGAAATGGGTAGTGA+GGG | 0.552245 | tig0023712:+66387 | None:intergenic |
| AGCGACAATGGCGGCTTCGG+AGG | 0.554782 | tig0023712:-71001 | Msa1411000:exon |
| AATTATAGTTACCCTCTGAT+GGG | 0.555780 | tig0023712:+66138 | None:intergenic |
| TACCTCAATTCAACTGTGAA+AGG | 0.555853 | tig0023712:-71661 | Msa1411000:intron |
| GCTTTCTCAATGTATCATCC+AGG | 0.559702 | tig0023712:-67962 | Msa1411000:intron |
| GGAGAAGAGGGTATACAAGA+AGG | 0.560303 | tig0023712:-66482 | Msa1411000:CDS |
| GCAATGACTGCTCTCGATCA+GGG | 0.560912 | tig0023712:-70858 | Msa1411000:CDS |
| ATTATTAATCCAAGCATGGA+TGG | 0.567950 | tig0023712:+66448 | None:intergenic |
| GAGAAATATGGCCATCCTGA+TGG | 0.570373 | tig0023712:-70127 | Msa1411000:CDS |
| GAGGGACCTATCATGGAGGA+TGG | 0.572225 | tig0023712:-66002 | Msa1411000:CDS |
| CAAGAACATTAAGCAAGAGC+AGG | 0.574845 | tig0023712:-69242 | Msa1411000:CDS |
| ATATACCTAGGGGCCAAAGA+AGG | 0.576022 | tig0023712:+69485 | None:intergenic |
| ATTCTGTTTCGAACAATGTG+TGG | 0.576101 | tig0023712:-66337 | Msa1411000:CDS |
| TGTGAGACTGAAGGAGAAGA+GGG | 0.578820 | tig0023712:-66494 | Msa1411000:CDS |
| CACGGAATGCTCAGGGACAT+GGG | 0.581007 | tig0023712:-68014 | Msa1411000:CDS |
| ATTAGCTCTTCGAGCAGGCG+AGG | 0.583437 | tig0023712:+68970 | None:intergenic |
| ATGTGAGACTGAAGGAGAAG+AGG | 0.583582 | tig0023712:-66495 | Msa1411000:CDS |
| CGAAGCAGTGGAGAAGGTGA+AGG | 0.586598 | tig0023712:-66195 | Msa1411000:CDS |
| TATTATGTACAGCAAAGTCA+TGG | 0.589343 | tig0023712:-69374 | Msa1411000:intron |
| ACATGGAAATTCCAGTTCGA+AGG | 0.590375 | tig0023712:-69327 | Msa1411000:CDS |
| CGTATACGGAACTATAGGAA+TGG | 0.591388 | tig0023712:+70936 | None:intergenic |
| AAGCAGTGGAGAAGGTGAAG+GGG | 0.593292 | tig0023712:-66193 | Msa1411000:CDS |
| AAGTTCCAGGCCCCATCAGA+GGG | 0.594239 | tig0023712:-66149 | Msa1411000:CDS |
| CTCAGTGCTAGAAAGACTAC+CGG | 0.595452 | tig0023712:-67146 | Msa1411000:CDS |
| ACTTTATGAGATGGACTCAC+AGG | 0.596393 | tig0023712:-66621 | Msa1411000:CDS |
| GTACTGAAGGTTAGCGACAA+TGG | 0.599210 | tig0023712:-71013 | Msa1411000:exon |
| TGAGTCTGTTGTTAAGAAGG+TGG | 0.602960 | tig0023712:-67075 | Msa1411000:CDS |
| GCTTGGATTAATAATAAAAG+GGG | 0.607241 | tig0023712:-66440 | Msa1411000:CDS |
| AGCAGTGGAGAAGGTGAAGG+GGG | 0.609992 | tig0023712:-66192 | Msa1411000:CDS |
| GGCAATTGCAGAATCTAAGG+AGG | 0.610209 | tig0023712:-66258 | Msa1411000:CDS |
| AGTCTCACATGTTACATCAA+GGG | 0.611459 | tig0023712:+66508 | None:intergenic |
| GAAATGGGTAGTGAGGGGCA+TGG | 0.614569 | tig0023712:+66393 | None:intergenic |
| GGGTTCCGGAGCAAGCCCGA+AGG | 0.615406 | tig0023712:-66237 | Msa1411000:CDS |
| ACATGTTACATCAAGGGTCA+AGG | 0.619156 | tig0023712:+66514 | None:intergenic |
| TTACCTGTCTGCCATCAGGA+TGG | 0.619728 | tig0023712:+70116 | None:intergenic |
| ATTCCTTCTGAATATTGATG+GGG | 0.620788 | tig0023712:-69657 | Msa1411000:CDS |
| AAGGGGTAATGGCCTGATTG+CGG | 0.621780 | tig0023712:-66423 | Msa1411000:CDS |
| ATGCCCCATCAATATTCAGA+AGG | 0.625006 | tig0023712:+69654 | None:intergenic |
| CCTGCTCGAAGAGCTAATGA+AGG | 0.628255 | tig0023712:-68965 | Msa1411000:intron |
| AATGCCTTCAGGTGATCCAC+CGG | 0.631005 | tig0023712:+67127 | None:intergenic |
| GTTATACCACGGAATGCTCA+GGG | 0.631735 | tig0023712:-68021 | Msa1411000:CDS |
| CCCTCACTACCCATTTCACA+AGG | 0.633141 | tig0023712:-66387 | Msa1411000:CDS |
| CCATGTCCCTGAGCATTCCG+TGG | 0.633239 | tig0023712:+68015 | None:intergenic |
| GTTACATCAAGGGTCAAGGA+AGG | 0.635132 | tig0023712:+66518 | None:intergenic |
| ATATTGATGGGGCATCTGGT+GGG | 0.635499 | tig0023712:-69646 | Msa1411000:CDS |
| GGGTGGCTGAGACCTGCGAT+CGG | 0.642660 | tig0023712:-67994 | Msa1411000:CDS |
| CGAGGAGGATGAGGACAATG+AGG | 0.642963 | tig0023712:-65976 | Msa1411000:CDS |
| TTCATCTTCTACCAACCAAG+AGG | 0.643041 | tig0023712:+65749 | None:intergenic |
| CATAAAGTCTATGAGTAGTG+AGG | 0.643107 | tig0023712:-70611 | Msa1411000:intron |
| GCAATTGCAGAATCTAAGGA+GGG | 0.643438 | tig0023712:-66257 | Msa1411000:CDS |
| TATCATGGAGGATGGAGTCG+AGG | 0.651911 | tig0023712:-65994 | Msa1411000:CDS |
| TCAAGGAAGGCATCATATCG+AGG | 0.660722 | tig0023712:+66531 | None:intergenic |
| AGTGCTAGAAAGACTACCGG+TGG | 0.660959 | tig0023712:-67143 | Msa1411000:CDS |
| TAGACAACAGCAATGACCAA+TGG | 0.666183 | tig0023712:+69584 | None:intergenic |
| CTTCTGAAGAGGTTCATCAT+CGG | 0.667489 | tig0023712:+69303 | None:intergenic |
| GCAGTGGAGAAGGTGAAGGG+GGG | 0.669906 | tig0023712:-66191 | Msa1411000:CDS |
| CATGGAGGATGGAGTCGAGG+AGG | 0.673838 | tig0023712:-65991 | Msa1411000:CDS |
| AAAAGATGGCAGTTATACCA+CGG | 0.676825 | tig0023712:-68032 | Msa1411000:intron |
| ATTATAGTTACCCTCTGATG+GGG | 0.682503 | tig0023712:+66139 | None:intergenic |
| CTTGTGAAATGGGTAGTGAG+GGG | 0.685622 | tig0023712:+66388 | None:intergenic |
| ACAACAGACTCAGTAATATG+GGG | 0.687656 | tig0023712:+67086 | None:intergenic |
| CTGAAGGTTAGCGACAATGG+CGG | 0.691080 | tig0023712:-71010 | Msa1411000:exon |
| GATGTAACATGTGAGACTGA+AGG | 0.694718 | tig0023712:-66503 | Msa1411000:CDS |
| ACTACCGGTGGATCACCTGA+AGG | 0.695036 | tig0023712:-67131 | Msa1411000:CDS |
| GCTGAGACCTGCGATCGGTG+TGG | 0.698808 | tig0023712:-67989 | Msa1411000:CDS |
| AGTCATGGATGTCTTCACAA+AGG | 0.701337 | tig0023712:-69359 | Msa1411000:CDS |
| GTAGTCTTTCTAGCACTGAG+AGG | 0.706827 | tig0023712:+67149 | None:intergenic |
| GGAATGCTCAGGGACATGGG+TGG | 0.707591 | tig0023712:-68011 | Msa1411000:CDS |
| AGCTACTTACTCAAACAGCA+GGG | 0.713855 | tig0023712:-66589 | Msa1411000:CDS |
| TGATGAGGGACCTATCATGG+AGG | 0.828116 | tig0023712:-66006 | Msa1411000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTCTTTTTTTTCAAATT+TGG | - | tig0023712:67830-67849 | Msa1411000:intron | 10.0% |
| !!! | TATTCTTTTTTTTCAAATTT+GGG | - | tig0023712:67831-67850 | Msa1411000:intron | 10.0% |
| !! | TAAAAAAAGAATAATCTATT+TGG | + | tig0023712:68126-68145 | None:intergenic | 10.0% |
| !!! | ATAGATTATTCTTTTTTTAT+TGG | - | tig0023712:68127-68146 | Msa1411000:intron | 10.0% |
| !!! | TATTTTAAAACAACTTTAAT+AGG | - | tig0023712:70071-70090 | Msa1411000:intron | 10.0% |
| !! | TTATTGTCAATATGAAAATT+GGG | + | tig0023712:66323-66342 | None:intergenic | 15.0% |
| !! | ATTATTGTCAATATGAAAAT+TGG | + | tig0023712:66324-66343 | None:intergenic | 15.0% |
| !!! | AATTTTCATATTGACAATAA+TGG | - | tig0023712:66323-66342 | Msa1411000:CDS | 15.0% |
| !! | CTGAAATAAAGAAAAAATAT+AGG | - | tig0023712:66909-66928 | Msa1411000:intron | 15.0% |
| !!! | CTTGTATATTTTATACTAAT+TGG | + | tig0023712:67456-67475 | None:intergenic | 15.0% |
| !!! | AAACAACAATTTTCAAAATA+GGG | + | tig0023712:68431-68450 | None:intergenic | 15.0% |
| !!! | TCTTTAGTTTTACAAAATTT+TGG | + | tig0023712:68927-68946 | None:intergenic | 15.0% |
| !! | ATTTCATAGTCTATTATTAT+AGG | - | tig0023712:69719-69738 | Msa1411000:intron | 15.0% |
| !!! | GTTAGTTTAATTTTATGATA+TGG | - | tig0023712:69949-69968 | Msa1411000:intron | 15.0% |
| !!! | TTTTGTTTTTGTTTTTCAAA+AGG | - | tig0023712:71480-71499 | Msa1411000:intron | 15.0% |
| !!! | GAAAATTTTGTTAAGTTGTA+AGG | + | tig0023712:65700-65719 | None:intergenic | 20.0% |
| !!! | TGTTTAGTTTTAGTTTCAAT+TGG | - | tig0023712:65877-65896 | Msa1411000:CDS | 20.0% |
| !!! | TTTTGTAAAGAAACTTAGAT+TGG | - | tig0023712:66072-66091 | Msa1411000:CDS | 20.0% |
| !! | TTTGTAAAGAAACTTAGATT+GGG | - | tig0023712:66073-66092 | Msa1411000:CDS | 20.0% |
| !! | TTTGAACTTTATCTTAATTG+TGG | - | tig0023712:66107-66126 | Msa1411000:CDS | 20.0% |
| !! | TGATGTTTATAGATTGAATT+AGG | - | tig0023712:66186-66205 | Msa1411000:CDS | 20.0% |
| !!! | AGTTTTTTTTGTGTTGTTTT+AGG | - | tig0023712:66239-66258 | Msa1411000:CDS | 20.0% |
| !!! | ACTGTATTTTTGTTTGTATT+AGG | - | tig0023712:67209-67228 | Msa1411000:intron | 20.0% |
| !! | TAACAAGAATGAAAGATAAA+TGG | + | tig0023712:67869-67888 | None:intergenic | 20.0% |
| !!! | GAAACAACAATTTTCAAAAT+AGG | + | tig0023712:68432-68451 | None:intergenic | 20.0% |
| !! | TATGCATTGGAAAATATTTA+AGG | + | tig0023712:68494-68513 | None:intergenic | 20.0% |
| !!! | ACATGGTTTTATATTATGAA+AGG | - | tig0023712:68775-68794 | Msa1411000:intron | 20.0% |
| !! | CTAAAGAAATTAAAAGAAAC+AGG | - | tig0023712:68940-68959 | Msa1411000:intron | 20.0% |
| !!! | TCAATGTAAAGTATTACTAT+TGG | - | tig0023712:69356-69375 | Msa1411000:CDS | 20.0% |
| !!! | CAATGTAAAGTATTACTATT+GGG | - | tig0023712:69357-69376 | Msa1411000:CDS | 20.0% |
| !! | CTTTCATCACAATAAAAATA+TGG | - | tig0023712:69533-69552 | Msa1411000:CDS | 20.0% |
| !! | ATAATAGACTATGAAATGAA+TGG | + | tig0023712:69716-69735 | None:intergenic | 20.0% |
| !! | TGAATGCTATCAAAATAATT+TGG | - | tig0023712:69833-69852 | Msa1411000:intron | 20.0% |
| !! | TATTGATATGTTCTTAGTTA+AGG | - | tig0023712:69911-69930 | Msa1411000:intron | 20.0% |
| !! | AGTATGACATAAAAATCAAT+TGG | + | tig0023712:70549-70568 | None:intergenic | 20.0% |
| !!! | TTTTATTATTAATCCAAGCA+TGG | + | tig0023712:70841-70860 | None:intergenic | 20.0% |
| !! | ATGCTTGGATTAATAATAAA+AGG | - | tig0023712:70840-70859 | Msa1411000:CDS | 20.0% |
| !! | TGCTTGGATTAATAATAAAA+GGG | - | tig0023712:70841-70860 | Msa1411000:CDS | 20.0% |
| !! | ATTAATAATAAAAGGGGTAA+TGG | - | tig0023712:70848-70867 | Msa1411000:CDS | 20.0% |
| !!! | TTATCTGAAACATTAAAGTA+TGG | - | tig0023712:71668-71687 | Msa1411000:five_prime_UTR | 20.0% |
| !!! | TGAGTTTAAGGATTAAATTT+TGG | - | tig0023712:71695-71714 | Msa1411000:five_prime_UTR | 20.0% |
| !!! | TATTAGATAGTTTTAGTTGA+GGG | - | tig0023712:71752-71771 | Msa1411000:five_prime_UTR | 20.0% |
| ! | AATAGTAGAAACAAAACCTA+GGG | + | tig0023712:65787-65806 | None:intergenic | 25.0% |
| !!! | GATTTGAATTTAGTACTGAT+TGG | - | tig0023712:66739-66758 | Msa1411000:intron | 25.0% |
| ! | TTTGATCCATTTAGTATTCT+TGG | - | tig0023712:66863-66882 | Msa1411000:intron | 25.0% |
| ! | TCTAATCCAAGAATACTAAA+TGG | + | tig0023712:66872-66891 | None:intergenic | 25.0% |
| ! | AAAAACAATATCAGTTACAC+AGG | + | tig0023712:67042-67061 | None:intergenic | 25.0% |
| !!! | TTTTATTCGTTTTGTTTCAG+AGG | - | tig0023712:67058-67077 | Msa1411000:intron | 25.0% |
| ! | TGTATTAGGAAAATATACAG+TGG | - | tig0023712:67223-67242 | Msa1411000:intron | 25.0% |
| ! | GTATTAGGAAAATATACAGT+GGG | - | tig0023712:67224-67243 | Msa1411000:intron | 25.0% |
| ! | AATTCTTAACTGTGATTAAC+TGG | + | tig0023712:67355-67374 | None:intergenic | 25.0% |
| ! | AATTCCTTCTGAATATTGAT+GGG | - | tig0023712:67624-67643 | Msa1411000:intron | 25.0% |
| !! | ATACTTTTACTTTGGATTGT+TGG | - | tig0023712:67659-67678 | Msa1411000:intron | 25.0% |
| !! | AGTTAAGGTATCTTATTGTA+TGG | - | tig0023712:68091-68110 | Msa1411000:intron | 25.0% |
| ! | TAATTGTTTAAATTGGATCC+AGG | + | tig0023712:68540-68559 | None:intergenic | 25.0% |
| !! | AATTTTATGTAAACGCCTTA+AGG | - | tig0023712:68699-68718 | Msa1411000:intron | 25.0% |
| ! | TTATGAAAGGAACTAAATAG+TGG | - | tig0023712:68788-68807 | Msa1411000:intron | 25.0% |
| ! | ACGTATTTGCAAAAACATTT+GGG | + | tig0023712:68892-68911 | None:intergenic | 25.0% |
| ! | AACGTATTTGCAAAAACATT+TGG | + | tig0023712:68893-68912 | None:intergenic | 25.0% |
| !! | AATGTGCTTCATTTTAAATG+TGG | + | tig0023712:69094-69113 | None:intergenic | 25.0% |
| !! | AGAAAAACTTGATGATCATA+GGG | + | tig0023712:69121-69140 | None:intergenic | 25.0% |
| !! | AAGAAAAACTTGATGATCAT+AGG | + | tig0023712:69122-69141 | None:intergenic | 25.0% |
| ! | GAGGGAAATGAAAATATAAT+AGG | + | tig0023712:69206-69225 | None:intergenic | 25.0% |
| ! | ATATAATATACCAGAGACAA+AGG | + | tig0023712:69645-69664 | None:intergenic | 25.0% |
| ! | GAGAAAGCAATAATATTAGT+TGG | + | tig0023712:70049-70068 | None:intergenic | 25.0% |
| ! | TAAATACACAAGAAATAGCA+TGG | + | tig0023712:70295-70314 | None:intergenic | 25.0% |
| ! | CATAGAAAAATGTGCATAAA+TGG | + | tig0023712:70356-70375 | None:intergenic | 25.0% |
| !! | TACCATATATACGGATTAAA+GGG | - | tig0023712:70415-70434 | Msa1411000:CDS | 25.0% |
| !! | GCTGTTTGAAATTTAAATGT+TGG | - | tig0023712:70519-70538 | Msa1411000:intron | 25.0% |
| ! | GCTTGGATTAATAATAAAAG+GGG | - | tig0023712:70842-70861 | Msa1411000:CDS | 25.0% |
| ! | AATGGAACCACAAATAAAAA+TGG | - | tig0023712:71415-71434 | Msa1411000:intron | 25.0% |
| ! | TCATGATATCAGCTAAATAA+AGG | + | tig0023712:71635-71654 | None:intergenic | 25.0% |
| ! | AAGTATGGAAAATGAGTTTA+AGG | - | tig0023712:71683-71702 | Msa1411000:five_prime_UTR | 25.0% |
| !!! | GTATTAGATAGTTTTAGTTG+AGG | - | tig0023712:71751-71770 | Msa1411000:five_prime_UTR | 25.0% |
| GAATAGTAGAAACAAAACCT+AGG | + | tig0023712:65788-65807 | None:intergenic | 30.0% | |
| TTGTGAAATCACGCAAAAAA+GGG | + | tig0023712:65913-65932 | None:intergenic | 30.0% | |
| ATTGTGAAATCACGCAAAAA+AGG | + | tig0023712:65914-65933 | None:intergenic | 30.0% | |
| !!! | TTTGTGTTGTTTTAGGTTGT+TGG | - | tig0023712:66246-66265 | Msa1411000:CDS | 30.0% |
| !!! | TTGTGTTGTTTTAGGTTGTT+GGG | - | tig0023712:66247-66266 | Msa1411000:CDS | 30.0% |
| ! | CACAACTTTGTTATCGTATA+CGG | + | tig0023712:66363-66382 | None:intergenic | 30.0% |
| TCGAAATCTGCAAAATCAAA+AGG | + | tig0023712:66584-66603 | None:intergenic | 30.0% | |
| TTGGGTGATTATGATTATTC+TGG | - | tig0023712:66641-66660 | Msa1411000:CDS | 30.0% | |
| TAAAATCTCATTCGAACACT+CGG | + | tig0023712:66799-66818 | None:intergenic | 30.0% | |
| GTGATCTGCATAAAATTTAC+AGG | + | tig0023712:66839-66858 | None:intergenic | 30.0% | |
| CTGAAATGCATAGAAAGTTA+GGG | + | tig0023712:67527-67546 | None:intergenic | 30.0% | |
| ACTGAAATGCATAGAAAGTT+AGG | + | tig0023712:67528-67547 | None:intergenic | 30.0% | |
| GTTTCTGATAGTTTACATTC+TGG | - | tig0023712:67546-67565 | Msa1411000:intron | 30.0% | |
| ! | TACGTGGAATATTTTATTGC+AGG | - | tig0023712:67574-67593 | Msa1411000:intron | 30.0% |
| ! | ACGTGGAATATTTTATTGCA+GGG | - | tig0023712:67575-67594 | Msa1411000:intron | 30.0% |
| TTTATTGCAGGGATTTCAAA+TGG | - | tig0023712:67586-67605 | Msa1411000:intron | 30.0% | |
| TTATTGCAGGGATTTCAAAT+GGG | - | tig0023712:67587-67606 | Msa1411000:intron | 30.0% | |
| CAATATTCAGAAGGAATTGA+GGG | + | tig0023712:67622-67641 | None:intergenic | 30.0% | |
| TCAATATTCAGAAGGAATTG+AGG | + | tig0023712:67623-67642 | None:intergenic | 30.0% | |
| CAATTCCTTCTGAATATTGA+TGG | - | tig0023712:67623-67642 | Msa1411000:intron | 30.0% | |
| ATTCCTTCTGAATATTGATG+GGG | - | tig0023712:67625-67644 | Msa1411000:intron | 30.0% | |
| TCAAGATCATCAAAGTATAC+CGG | - | tig0023712:67725-67744 | Msa1411000:intron | 30.0% | |
| CTTCATGAAGTAATAGTAAG+TGG | + | tig0023712:67777-67796 | None:intergenic | 30.0% | |
| TTGCACAAGAAATATACCTA+GGG | + | tig0023712:67811-67830 | None:intergenic | 30.0% | |
| ATTGCACAAGAAATATACCT+AGG | + | tig0023712:67812-67831 | None:intergenic | 30.0% | |
| GAATGAAAGATAAATGGTGT+GGG | + | tig0023712:67863-67882 | None:intergenic | 30.0% | |
| AGAATGAAAGATAAATGGTG+TGG | + | tig0023712:67864-67883 | None:intergenic | 30.0% | |
| TATTATGTACAGCAAAGTCA+TGG | - | tig0023712:67908-67927 | Msa1411000:intron | 30.0% | |
| ! | AACATAAAAAGCTTCTGAAG+AGG | + | tig0023712:67993-68012 | None:intergenic | 30.0% |
| ! | TCTTCAGAAGCTTTTTATGT+TGG | - | tig0023712:67992-68011 | Msa1411000:CDS | 30.0% |
| ! | AGAAGCTTTTTATGTTGGTA+AGG | - | tig0023712:67997-68016 | Msa1411000:CDS | 30.0% |
| !!! | CCATGCTATTTTCTTTTAGA+CGG | - | tig0023712:68200-68219 | Msa1411000:intron | 30.0% |
| ! | TTATTCGAACTGCATTTTAG+AGG | - | tig0023712:68645-68664 | Msa1411000:intron | 30.0% |
| AGAGGAATTGAAATTGTGTA+TGG | - | tig0023712:68663-68682 | Msa1411000:intron | 30.0% | |
| TTTCCCTCATACAAATGTAT+TGG | - | tig0023712:68744-68763 | Msa1411000:intron | 30.0% | |
| CTTCCAATACATTTGTATGA+GGG | + | tig0023712:68750-68769 | None:intergenic | 30.0% | |
| ACTTCCAATACATTTGTATG+AGG | + | tig0023712:68751-68770 | None:intergenic | 30.0% | |
| CATACAAATGTATTGGAAGT+TGG | - | tig0023712:68751-68770 | Msa1411000:intron | 30.0% | |
| ! | AAAAACATTTGGGATTGAGT+TGG | + | tig0023712:68882-68901 | None:intergenic | 30.0% |
| ! | ATTGACTTAGATTCATTACC+TGG | + | tig0023712:69341-69360 | None:intergenic | 30.0% |
| ! | ATATGTAAAAGTGCAATTGG+AGG | + | tig0023712:69395-69414 | None:intergenic | 30.0% |
| ! | TGCATATGTAAAAGTGCAAT+TGG | + | tig0023712:69398-69417 | None:intergenic | 30.0% |
| ! | ATTGCACTTTTACATATGCA+CGG | - | tig0023712:69398-69417 | Msa1411000:intron | 30.0% |
| TCAATCAAGACCATTATTCA+AGG | - | tig0023712:69665-69684 | Msa1411000:CDS | 30.0% | |
| ATAGACTATGAAATGAATGG+AGG | + | tig0023712:69713-69732 | None:intergenic | 30.0% | |
| !! | TAAGAACCAAAAGGTACTAA+AGG | + | tig0023712:69862-69881 | None:intergenic | 30.0% |
| ! | TTCTTATTCTGATGCCTTTT+GGG | - | tig0023712:69876-69895 | Msa1411000:intron | 30.0% |
| AACAACAGACTCAGTAATAT+GGG | + | tig0023712:70200-70219 | None:intergenic | 30.0% | |
| TAACAACAGACTCAGTAATA+TGG | + | tig0023712:70201-70220 | None:intergenic | 30.0% | |
| GCATTAAAACACTGTACATA+TGG | - | tig0023712:70240-70259 | Msa1411000:intron | 30.0% | |
| TTAATCCGTATATATGGTAC+TGG | + | tig0023712:70414-70433 | None:intergenic | 30.0% | |
| ! | GTACCATATATACGGATTAA+AGG | - | tig0023712:70414-70433 | Msa1411000:CDS | 30.0% |
| ATCCCTTTAATCCGTATATA+TGG | + | tig0023712:70420-70439 | None:intergenic | 30.0% | |
| TAAAGGGATATTCTTCATGT+TGG | - | tig0023712:70431-70450 | Msa1411000:CDS | 30.0% | |
| TTATGTGAAAATGCTACAGT+TGG | - | tig0023712:70475-70494 | Msa1411000:intron | 30.0% | |
| ATTTCAGGAACTTTATGAGA+TGG | - | tig0023712:70652-70671 | Msa1411000:CDS | 30.0% | |
| ATTATTAATCCAAGCATGGA+TGG | + | tig0023712:70837-70856 | None:intergenic | 30.0% | |
| AATTCTCTTCCTTGTGAAAT+GGG | + | tig0023712:70907-70926 | None:intergenic | 30.0% | |
| AAATTCTCTTCCTTGTGAAA+TGG | + | tig0023712:70908-70927 | None:intergenic | 30.0% | |
| !!! | TTTTCAGAAGGTTAGTTTCA+TGG | - | tig0023712:70970-70989 | Msa1411000:CDS | 30.0% |
| AATTATAGTTACCCTCTGAT+GGG | + | tig0023712:71147-71166 | None:intergenic | 30.0% | |
| AAATTATAGTTACCCTCTGA+TGG | + | tig0023712:71148-71167 | None:intergenic | 30.0% | |
| !!! | AGCAGCTTGATTCTTATTTT+TGG | + | tig0023712:71395-71414 | None:intergenic | 30.0% |
| AATAAGAATCAAGCTGCTAA+TGG | - | tig0023712:71397-71416 | Msa1411000:intron | 30.0% | |
| !!! | TTGTTTTTGAGTGTGTGAAG+TGG | + | tig0023712:65565-65584 | None:intergenic | 35.0% |
| TACCTCAATTCAACTGTGAA+AGG | - | tig0023712:65621-65640 | Msa1411000:three_prime_UTR | 35.0% | |
| TACCTTTCACAGTTGAATTG+AGG | + | tig0023712:65626-65645 | None:intergenic | 35.0% | |
| TTGGGAATCGAAAATTGGAT+CGG | + | tig0023712:65733-65752 | None:intergenic | 35.0% | |
| CTATGAAATCGAAGGAGATT+GGG | + | tig0023712:65751-65770 | None:intergenic | 35.0% | |
| ACTATGAAATCGAAGGAGAT+TGG | + | tig0023712:65752-65771 | None:intergenic | 35.0% | |
| AAGGTCAACTATGAAATCGA+AGG | + | tig0023712:65759-65778 | None:intergenic | 35.0% | |
| AACAAAACCTAGGGATTGAA+AGG | + | tig0023712:65778-65797 | None:intergenic | 35.0% | |
| GTTATCGTATACGGAACTAT+AGG | + | tig0023712:66354-66373 | None:intergenic | 35.0% | |
| ACTTGACATTGTTACTGCTT+TGG | - | tig0023712:66622-66641 | Msa1411000:CDS | 35.0% | |
| CTTGACATTGTTACTGCTTT+GGG | - | tig0023712:66623-66642 | Msa1411000:CDS | 35.0% | |
| CATAAAGTCTATGAGTAGTG+AGG | - | tig0023712:66671-66690 | Msa1411000:intron | 35.0% | |
| CGTGAAAACTACGAGAAATA+TGG | - | tig0023712:67143-67162 | Msa1411000:CDS | 35.0% | |
| GAATTCAGTTAGTGACTGTT+AGG | - | tig0023712:67370-67389 | Msa1411000:intron | 35.0% | |
| CTGTTAGGAATTCAGTTAGA+AGG | - | tig0023712:67385-67404 | Msa1411000:intron | 35.0% | |
| TGGTGTATATATAGTACAGC+TGG | + | tig0023712:67420-67439 | None:intergenic | 35.0% | |
| TAGAAAGTTAGGGAAAGTGA+AGG | + | tig0023712:67517-67536 | None:intergenic | 35.0% | |
| TCTGATAGTTTACATTCTGG+TGG | - | tig0023712:67549-67568 | Msa1411000:intron | 35.0% | |
| CTGATAGTTTACATTCTGGT+GGG | - | tig0023712:67550-67569 | Msa1411000:intron | 35.0% | |
| TGATAGTTTACATTCTGGTG+GGG | - | tig0023712:67551-67570 | Msa1411000:intron | 35.0% | |
| TATTTGCATTCTCTTGCCAT+TGG | - | tig0023712:67682-67701 | Msa1411000:intron | 35.0% | |
| TTGATGCATCACATAGTTTC+CGG | + | tig0023712:67747-67766 | None:intergenic | 35.0% | |
| TTACTTCATGAAGCCTTCTT+TGG | - | tig0023712:67784-67803 | Msa1411000:intron | 35.0% | |
| TGCACAAGAAATATACCTAG+GGG | + | tig0023712:67810-67829 | None:intergenic | 35.0% | |
| TAAGATACCTTAACTAGTGC+AGG | + | tig0023712:68086-68105 | None:intergenic | 35.0% | |
| ! | AAGGTATCTTATTGTATGGC+AGG | - | tig0023712:68095-68114 | Msa1411000:intron | 35.0% |
| CCGTCTAAAAGAAAATAGCA+TGG | + | tig0023712:68203-68222 | None:intergenic | 35.0% | |
| ! | CTGAAATCACTTGCTAAAGA+TGG | + | tig0023712:68273-68292 | None:intergenic | 35.0% |
| CTTTAGCAAGTGATTTCAGA+CGG | - | tig0023712:68274-68293 | Msa1411000:intron | 35.0% | |
| !! | AAGTGATTTCAGACGGATTT+TGG | - | tig0023712:68281-68300 | Msa1411000:intron | 35.0% |
| ! | ACTATTTCTCTTCTGCTTCT+TGG | - | tig0023712:68350-68369 | Msa1411000:intron | 35.0% |
| AAAATAGGGTGCAGACTAAA+GGG | + | tig0023712:68417-68436 | None:intergenic | 35.0% | |
| TGCAGTGATTTAGTATGCAT+TGG | + | tig0023712:68507-68526 | None:intergenic | 35.0% | |
| TTTAAATTGGATCCAGGCAT+GGG | + | tig0023712:68534-68553 | None:intergenic | 35.0% | |
| ATAATCCACATGCTTCCTTA+AGG | + | tig0023712:68717-68736 | None:intergenic | 35.0% | |
| ATGTATTGGAAGTTGGAACA+TGG | - | tig0023712:68758-68777 | Msa1411000:intron | 35.0% | |
| TGTAACTATCTTTAGATGCG+TGG | - | tig0023712:68812-68831 | Msa1411000:intron | 35.0% | |
| GCAGTCTCAGTAATTCAATA+AGG | + | tig0023712:69039-69058 | None:intergenic | 35.0% | |
| TGTGGTTATCATCTTAGCTT+CGG | + | tig0023712:69076-69095 | None:intergenic | 35.0% | |
| GTCATCATTGTCTTATGTGA+TGG | - | tig0023712:69142-69161 | Msa1411000:intron | 35.0% | |
| ACTAGCGCATTAAACAATGA+GGG | + | tig0023712:69224-69243 | None:intergenic | 35.0% | |
| AAAAGATGGCAGTTATACCA+CGG | - | tig0023712:69250-69269 | Msa1411000:CDS | 35.0% | |
| TTACATATGCACGGAAATGA+AGG | - | tig0023712:69407-69426 | Msa1411000:intron | 35.0% | |
| ATCAAGACCATTATTCAAGG+AGG | - | tig0023712:69668-69687 | Msa1411000:CDS | 35.0% | |
| TCAAGACCATTATTCAAGGA+GGG | - | tig0023712:69669-69688 | Msa1411000:CDS | 35.0% | |
| TATTGACCCTCCTTGAATAA+TGG | + | tig0023712:69678-69697 | None:intergenic | 35.0% | |
| ATAGGAGAAGCTTTCATCAT+AGG | - | tig0023712:69737-69756 | Msa1411000:intron | 35.0% | |
| GAAGCTTTCATCATAGGATA+CGG | - | tig0023712:69743-69762 | Msa1411000:intron | 35.0% | |
| ! | TGGTTTCCTTTAGTACCTTT+TGG | - | tig0023712:69853-69872 | Msa1411000:intron | 35.0% |
| GCATCAGAATAAGAACCAAA+AGG | + | tig0023712:69871-69890 | None:intergenic | 35.0% | |
| ! | GTTCTTATTCTGATGCCTTT+TGG | - | tig0023712:69875-69894 | Msa1411000:intron | 35.0% |
| ! | CTAGAATGCTTTGTTGAACA+AGG | + | tig0023712:70014-70033 | None:intergenic | 35.0% |
| ACAACAGACTCAGTAATATG+GGG | + | tig0023712:70199-70218 | None:intergenic | 35.0% | |
| TACTGAGTCTGTTGTTAAGA+AGG | - | tig0023712:70204-70223 | Msa1411000:CDS | 35.0% | |
| !!! | AGTGTTTTAATGCACCTTAC+GGG | + | tig0023712:70233-70252 | None:intergenic | 35.0% |
| !!! | CAGTGTTTTAATGCACCTTA+CGG | + | tig0023712:70234-70253 | None:intergenic | 35.0% |
| TACATCGTCTAATGTTCTTG+AGG | - | tig0023712:70313-70332 | Msa1411000:intron | 35.0% | |
| ACATCGTCTAATGTTCTTGA+GGG | - | tig0023712:70314-70333 | Msa1411000:intron | 35.0% | |
| TGGATCCAGTACCATATATA+CGG | - | tig0023712:70406-70425 | Msa1411000:CDS | 35.0% | |
| !! | ATTCTTCATGTTGGTTCTAG+CGG | - | tig0023712:70440-70459 | Msa1411000:intron | 35.0% |
| CTGCATAGGAAGAAGAAAAA+TGG | + | tig0023712:70621-70640 | None:intergenic | 35.0% | |
| ! | TTTTCTTCTTCCTATGCAGA+AGG | - | tig0023712:70622-70641 | Msa1411000:CDS | 35.0% |
| AATGTTCTTACCTTCTGCAT+AGG | + | tig0023712:70635-70654 | None:intergenic | 35.0% | |
| AGTCTCACATGTTACATCAA+GGG | + | tig0023712:70777-70796 | None:intergenic | 35.0% | |
| TTCACAAGGAAGAGAATTTC+TGG | - | tig0023712:70909-70928 | Msa1411000:CDS | 35.0% | |
| !!! | GAATTTCTGGTTTTTGCTTG+CGG | - | tig0023712:70922-70941 | Msa1411000:CDS | 35.0% |
| ATTCTGTTTCGAACAATGTG+TGG | - | tig0023712:70945-70964 | Msa1411000:CDS | 35.0% | |
| !!! | CAATGTGTGGTTTTTTCAGA+AGG | - | tig0023712:70958-70977 | Msa1411000:CDS | 35.0% |
| !! | AAGGTTAGTTTCATGGATGA+AGG | - | tig0023712:70977-70996 | Msa1411000:CDS | 35.0% |
| TAAGGCAATTGCAGAATCTA+AGG | - | tig0023712:71021-71040 | Msa1411000:five_prime_UTR | 35.0% | |
| ATTATAGTTACCCTCTGATG+GGG | + | tig0023712:71146-71165 | None:intergenic | 35.0% | |
| !!! | TCAAAGTTTTGAAACGAACC+CGG | - | tig0023712:71227-71246 | Msa1411000:intron | 35.0% |
| !!! | TGCTTCGCCATTTTTATTTG+TGG | + | tig0023712:71425-71444 | None:intergenic | 35.0% |
| GGAACAAAAAGATGAGAGTA+TGG | + | tig0023712:71515-71534 | None:intergenic | 35.0% | |
| ! | TCTCATCTTTTTGTTCCTCT+TGG | - | tig0023712:71518-71537 | Msa1411000:intron | 35.0% |
| ! | ATCTTTTTGTTCCTCTTGGT+TGG | - | tig0023712:71522-71541 | Msa1411000:intron | 35.0% |
| GTCCATCTTAGTTTATCTGT+TGG | - | tig0023712:71579-71598 | Msa1411000:intron | 35.0% | |
| GTCCAACAGATAAACTAAGA+TGG | + | tig0023712:71584-71603 | None:intergenic | 35.0% | |
| TGTTGGACTACATTCATACT+TGG | - | tig0023712:71596-71615 | Msa1411000:intron | 35.0% | |
| !! | TTTGGTTCAGTTTCCGTTTT+CGG | - | tig0023712:71713-71732 | Msa1411000:five_prime_UTR | 35.0% |
| GGAGATTGGGAATCGAAAAT+TGG | + | tig0023712:65738-65757 | None:intergenic | 40.0% | |
| TAGTTGACCTTTCAATCCCT+AGG | - | tig0023712:65768-65787 | Msa1411000:three_prime_UTR | 40.0% | |
| !! | TTTAGGTTGTTGGGTACTGA+AGG | - | tig0023712:66256-66275 | Msa1411000:CDS | 40.0% |
| CGTATACGGAACTATAGGAA+TGG | + | tig0023712:66349-66368 | None:intergenic | 40.0% | |
| GTGAATGCTCTTCGATTTCT+TGG | + | tig0023712:66397-66416 | None:intergenic | 40.0% | |
| ACCGCAAATCCATCTTTCAA+AGG | - | tig0023712:66451-66470 | Msa1411000:CDS | 40.0% | |
| ! | CCCTTTGAAAGATGGATTTG+CGG | + | tig0023712:66455-66474 | None:intergenic | 40.0% |
| CCGCAAATCCATCTTTCAAA+GGG | - | tig0023712:66452-66471 | Msa1411000:CDS | 40.0% | |
| ! | TGATCTCACCCTTTGAAAGA+TGG | + | tig0023712:66463-66482 | None:intergenic | 40.0% |
| AATCCAGAAACACGCAGATA+CGG | + | tig0023712:66492-66511 | None:intergenic | 40.0% | |
| ! | AGTATTCTTGGATTAGAGCC+TGG | - | tig0023712:66875-66894 | Msa1411000:intron | 40.0% |
| ! | GGTCTGGATTTTTATCAGGA+TGG | + | tig0023712:66952-66971 | None:intergenic | 40.0% |
| ATGAGAAACGTCTTCAACCT+GGG | + | tig0023712:66973-66992 | None:intergenic | 40.0% | |
| AATGAGAAACGTCTTCAACC+TGG | + | tig0023712:66974-66993 | None:intergenic | 40.0% | |
| TTTATTACCTGTCTGCCATC+AGG | + | tig0023712:67173-67192 | None:intergenic | 40.0% | |
| CAGAATTCCGACTTAGGTAA+AGG | + | tig0023712:67292-67311 | None:intergenic | 40.0% | |
| GACTAACAGAATTCCGACTT+AGG | + | tig0023712:67298-67317 | None:intergenic | 40.0% | |
| ! | TAATTGGCACAAGAGTACAG+TGG | + | tig0023712:67440-67459 | None:intergenic | 40.0% |
| ATGCCCCATCAATATTCAGA+AGG | + | tig0023712:67631-67650 | None:intergenic | 40.0% | |
| ! | CTGGTGGGATACTTTTACTT+TGG | - | tig0023712:67651-67670 | Msa1411000:intron | 40.0% |
| TAGACAACAGCAATGACCAA+TGG | + | tig0023712:67701-67720 | None:intergenic | 40.0% | |
| AGTCATGGATGTCTTCACAA+AGG | - | tig0023712:67923-67942 | Msa1411000:intron | 40.0% | |
| ACATGGAAATTCCAGTTCGA+AGG | - | tig0023712:67955-67974 | Msa1411000:intron | 40.0% | |
| ! | CTTCTGAAGAGGTTCATCAT+CGG | + | tig0023712:67982-68001 | None:intergenic | 40.0% |
| GCTCTTGCTTAATGTTCTTG+AGG | + | tig0023712:68040-68059 | None:intergenic | 40.0% | |
| CAAGAACATTAAGCAAGAGC+AGG | - | tig0023712:68040-68059 | Msa1411000:intron | 40.0% | |
| CAAAATAGGGTGCAGACTAA+AGG | + | tig0023712:68418-68437 | None:intergenic | 40.0% | |
| GTTTAAATTGGATCCAGGCA+TGG | + | tig0023712:68535-68554 | None:intergenic | 40.0% | |
| CAGTGATAGAAAGCAGTCAA+TGG | - | tig0023712:68610-68629 | Msa1411000:intron | 40.0% | |
| TATCAACCCACACACAAGAA+TGG | + | tig0023712:68987-69006 | None:intergenic | 40.0% | |
| GACTAGCGCATTAAACAATG+AGG | + | tig0023712:69225-69244 | None:intergenic | 40.0% | |
| ! | GCGCTAGTCTCTATAAAAGA+TGG | - | tig0023712:69236-69255 | Msa1411000:CDS | 40.0% |
| GCTTTCTCAATGTATCATCC+AGG | - | tig0023712:69320-69339 | Msa1411000:CDS | 40.0% | |
| TCAACAGTTTCCTTTGTCTC+TGG | - | tig0023712:69632-69651 | Msa1411000:CDS | 40.0% | |
| GTTAAGGATGAAAAGCTGTC+TGG | - | tig0023712:69927-69946 | Msa1411000:intron | 40.0% | |
| TGATTTATGACCTCCTATGC+AGG | - | tig0023712:70105-70124 | Msa1411000:intron | 40.0% | |
| TGAGTCTGTTGTTAAGAAGG+TGG | - | tig0023712:70207-70226 | Msa1411000:CDS | 40.0% | |
| AGTAGCTAGCTAGCTACAAT+TGG | + | tig0023712:70383-70402 | None:intergenic | 40.0% | |
| ATTGTAGCTAGCTAGCTACT+CGG | - | tig0023712:70383-70402 | Msa1411000:CDS | 40.0% | |
| GCAGAAGGTAAGAACATTTC+AGG | - | tig0023712:70637-70656 | Msa1411000:CDS | 40.0% | |
| ! | ACTTTATGAGATGGACTCAC+AGG | - | tig0023712:70661-70680 | Msa1411000:CDS | 40.0% |
| AGCTACTTACTCAAACAGCA+GGG | - | tig0023712:70693-70712 | Msa1411000:intron | 40.0% | |
| ACATGTTACATCAAGGGTCA+AGG | + | tig0023712:70771-70790 | None:intergenic | 40.0% | |
| CAGTCTCACATGTTACATCA+AGG | + | tig0023712:70778-70797 | None:intergenic | 40.0% | |
| GATGTAACATGTGAGACTGA+AGG | - | tig0023712:70779-70798 | Msa1411000:intron | 40.0% | |
| ACATTGTTACCATCCATGCT+TGG | - | tig0023712:70825-70844 | Msa1411000:intron | 40.0% | |
| GCAATTGCAGAATCTAAGGA+GGG | - | tig0023712:71025-71044 | Msa1411000:five_prime_UTR | 40.0% | |
| !!! | CAAAGTTTTGAAACGAACCC+GGG | - | tig0023712:71228-71247 | Msa1411000:intron | 40.0% |
| TTCATCTTCTACCAACCAAG+AGG | + | tig0023712:71536-71555 | None:intergenic | 40.0% | |
| !! | AACTTAGAAGCGTCCGAAAA+CGG | + | tig0023712:71729-71748 | None:intergenic | 40.0% |
| GTACTGAAGGTTAGCGACAA+TGG | - | tig0023712:66269-66288 | Msa1411000:CDS | 45.0% | |
| ATCCAGAAACACGCAGATAC+GGG | + | tig0023712:66491-66510 | None:intergenic | 45.0% | |
| ! | CCTGGGTCTGGATTTTTATC+AGG | + | tig0023712:66956-66975 | None:intergenic | 45.0% |
| CCTGATAAAAATCCAGACCC+AGG | - | tig0023712:66953-66972 | Msa1411000:intron | 45.0% | |
| CTTTGTCGAGCACATTGCTA+AGG | - | tig0023712:67091-67110 | Msa1411000:CDS | 45.0% | |
| ! | TCGTAGTTTTCACGAGCTAC+TGG | + | tig0023712:67137-67156 | None:intergenic | 45.0% |
| GAGAAATATGGCCATCCTGA+TGG | - | tig0023712:67155-67174 | Msa1411000:CDS | 45.0% | |
| ACTGCCTTGTATTCGGAGTT+GGG | - | tig0023712:67249-67268 | Msa1411000:intron | 45.0% | |
| AAAGCCCAACTCCGAATACA+AGG | + | tig0023712:67256-67275 | None:intergenic | 45.0% | |
| TTGTATTCGGAGTTGGGCTT+TGG | - | tig0023712:67255-67274 | Msa1411000:intron | 45.0% | |
| CTTAGGTAAAGGACAGGACT+GGG | + | tig0023712:67281-67300 | None:intergenic | 45.0% | |
| ACTTAGGTAAAGGACAGGAC+TGG | + | tig0023712:67282-67301 | None:intergenic | 45.0% | |
| GTCCTGTCCTTTACCTAAGT+CGG | - | tig0023712:67282-67301 | Msa1411000:intron | 45.0% | |
| TTCCGACTTAGGTAAAGGAC+AGG | + | tig0023712:67287-67306 | None:intergenic | 45.0% | |
| GGAATTCTGTTAGTCACTGC+TGG | - | tig0023712:67303-67322 | Msa1411000:intron | 45.0% | |
| GGGAAAGTGAAGGAAAGAGA+GGG | + | tig0023712:67507-67526 | None:intergenic | 45.0% | |
| AGGGAAAGTGAAGGAAAGAG+AGG | + | tig0023712:67508-67527 | None:intergenic | 45.0% | |
| ! | CTGAATATTGATGGGGCATC+TGG | - | tig0023712:67632-67651 | Msa1411000:intron | 45.0% |
| ! | AATATTGATGGGGCATCTGG+TGG | - | tig0023712:67635-67654 | Msa1411000:intron | 45.0% |
| ! | ATATTGATGGGGCATCTGGT+GGG | - | tig0023712:67636-67655 | Msa1411000:intron | 45.0% |
| ATATACCTAGGGGCCAAAGA+AGG | + | tig0023712:67800-67819 | None:intergenic | 45.0% | |
| CACAAAGGCTGCTGAATACA+TGG | - | tig0023712:67938-67957 | Msa1411000:intron | 45.0% | |
| ! | AGGATGCTGCTTCCAAAACT+TGG | + | tig0023712:68066-68085 | None:intergenic | 45.0% |
| !! | GCTCAGTTGACTCGTGAATT+TGG | - | tig0023712:68237-68256 | Msa1411000:intron | 45.0% |
| AAAGCAGTCAATGGCTGAAG+TGG | - | tig0023712:68619-68638 | Msa1411000:intron | 45.0% | |
| ! | AAACGCCTTAAGGAAGCATG+TGG | - | tig0023712:68709-68728 | Msa1411000:intron | 45.0% |
| GGTAAGCCATTCTTGTGTGT+GGG | - | tig0023712:68978-68997 | Msa1411000:CDS | 45.0% | |
| AGTTATACCACGGAATGCTC+AGG | - | tig0023712:69260-69279 | Msa1411000:CDS | 45.0% | |
| GTTATACCACGGAATGCTCA+GGG | - | tig0023712:69261-69280 | Msa1411000:CDS | 45.0% | |
| ATCACCACAACCCTTAGCTA+GGG | + | tig0023712:69469-69488 | None:intergenic | 45.0% | |
| TATCACCACAACCCTTAGCT+AGG | + | tig0023712:69470-69489 | None:intergenic | 45.0% | |
| TTGTGGTGATACCCTGATCT+GGG | - | tig0023712:69479-69498 | Msa1411000:intron | 45.0% | |
| TACGTGCAGCATAACCCAAA+AGG | + | tig0023712:69893-69912 | None:intergenic | 45.0% | |
| ! | GTAGTCTTTCTAGCACTGAG+AGG | + | tig0023712:70136-70155 | None:intergenic | 45.0% |
| CTCAGTGCTAGAAAGACTAC+CGG | - | tig0023712:70136-70155 | Msa1411000:CDS | 45.0% | |
| AGAAATGGTGCAATGCCTTC+AGG | + | tig0023712:70169-70188 | None:intergenic | 45.0% | |
| ! | TGGACACAAGCATTTAGAGC+AGG | + | tig0023712:70275-70294 | None:intergenic | 45.0% |
| TCGTGAGCATGGGATCAAAT+TGG | + | tig0023712:70578-70597 | None:intergenic | 45.0% | |
| GAGCTACTTACTCAAACAGC+AGG | - | tig0023712:70692-70711 | Msa1411000:intron | 45.0% | |
| !! | TCAAGGAAGGCATCATATCG+AGG | + | tig0023712:70754-70773 | None:intergenic | 45.0% |
| GTTACATCAAGGGTCAAGGA+AGG | + | tig0023712:70767-70786 | None:intergenic | 45.0% | |
| ATGTGAGACTGAAGGAGAAG+AGG | - | tig0023712:70787-70806 | Msa1411000:intron | 45.0% | |
| TGTGAGACTGAAGGAGAAGA+GGG | - | tig0023712:70788-70807 | Msa1411000:intron | 45.0% | |
| ! | GGAGAAGAGGGTATACAAGA+AGG | - | tig0023712:70800-70819 | Msa1411000:intron | 45.0% |
| CTTGTGAAATGGGTAGTGAG+GGG | + | tig0023712:70897-70916 | None:intergenic | 45.0% | |
| CCTTGTGAAATGGGTAGTGA+GGG | + | tig0023712:70898-70917 | None:intergenic | 45.0% | |
| TCCTTGTGAAATGGGTAGTG+AGG | + | tig0023712:70899-70918 | None:intergenic | 45.0% | |
| ! | TGCTGTAACTGCTGCTTCTA+AGG | - | tig0023712:71003-71022 | Msa1411000:exon | 45.0% |
| GGCAATTGCAGAATCTAAGG+AGG | - | tig0023712:71024-71043 | Msa1411000:five_prime_UTR | 45.0% | |
| ! | GGGGGATCTAGATTGGTAAT+GGG | - | tig0023712:71109-71128 | Msa1411000:intron | 45.0% |
| !! | ATTGGTAATGGGCAAGTTCC+AGG | - | tig0023712:71120-71139 | Msa1411000:intron | 45.0% |
| GCTATTGTTTGTGCGACTCT+TGG | - | tig0023712:71173-71192 | Msa1411000:intron | 45.0% | |
| TTGTTTGTGCGACTCTTGGT+TGG | - | tig0023712:71177-71196 | Msa1411000:intron | 45.0% | |
| TGTTTGTGCGACTCTTGGTT+GGG | - | tig0023712:71178-71197 | Msa1411000:intron | 45.0% | |
| !! | TAAATTATAATTGTTTAAAT+TGG | + | tig0023712:68547-68566 | None:intergenic | 5.0% |
| CTGAAGGTTAGCGACAATGG+CGG | - | tig0023712:66272-66291 | Msa1411000:CDS | 50.0% | |
| TGCAATGACTGCTCTCGATC+AGG | - | tig0023712:66423-66442 | Msa1411000:CDS | 50.0% | |
| GCAATGACTGCTCTCGATCA+GGG | - | tig0023712:66424-66443 | Msa1411000:CDS | 50.0% | |
| TACCCGTATCTGCGTGTTTC+TGG | - | tig0023712:66486-66505 | Msa1411000:CDS | 50.0% | |
| AAACGTCTTCAACCTGGGTC+TGG | + | tig0023712:66968-66987 | None:intergenic | 50.0% | |
| TTACCTGTCTGCCATCAGGA+TGG | + | tig0023712:67169-67188 | None:intergenic | 50.0% | |
| CAACTCCGAATACAAGGCAG+TGG | + | tig0023712:67250-67269 | None:intergenic | 50.0% | |
| CACTGCCTTGTATTCGGAGT+TGG | - | tig0023712:67248-67267 | Msa1411000:intron | 50.0% | |
| TTACATTCTGGTGGGGTACG+TGG | - | tig0023712:67558-67577 | Msa1411000:intron | 50.0% | |
| TCATCATCGGTCCTTCGAAC+TGG | + | tig0023712:67969-67988 | None:intergenic | 50.0% | |
| ! | AGCAAGAGCAGGCCAAGTTT+TGG | - | tig0023712:68051-68070 | Msa1411000:intron | 50.0% |
| GCAGCATCCTGCACTAGTTA+AGG | - | tig0023712:68076-68095 | Msa1411000:intron | 50.0% | |
| ! | CCTTCATTAGCTCTTCGAGC+AGG | + | tig0023712:68320-68339 | None:intergenic | 50.0% |
| CCTGCTCGAAGAGCTAATGA+AGG | - | tig0023712:68317-68336 | Msa1411000:intron | 50.0% | |
| AACAGGCTGAACTGCACTTG+CGG | - | tig0023712:68957-68976 | Msa1411000:intron | 50.0% | |
| CGGTAAGCCATTCTTGTGTG+TGG | - | tig0023712:68977-68996 | Msa1411000:CDS | 50.0% | |
| TCACCACAACCCTTAGCTAG+GGG | + | tig0023712:69468-69487 | None:intergenic | 50.0% | |
| GTTGTGGTGATACCCTGATC+TGG | - | tig0023712:69478-69497 | Msa1411000:intron | 50.0% | |
| GTGATACCCTGATCTGGGAA+CGG | - | tig0023712:69484-69503 | Msa1411000:intron | 50.0% | |
| TTTGCACCGTTCCCAGATCA+GGG | + | tig0023712:69493-69512 | None:intergenic | 50.0% | |
| ATTTGCACCGTTCCCAGATC+AGG | + | tig0023712:69494-69513 | None:intergenic | 50.0% | |
| AGTGCTAGAAAGACTACCGG+TGG | - | tig0023712:70139-70158 | Msa1411000:CDS | 50.0% | |
| AATGCCTTCAGGTGATCCAC+CGG | + | tig0023712:70158-70177 | None:intergenic | 50.0% | |
| ATATGGGGCAGCTGCAGAAA+TGG | + | tig0023712:70184-70203 | None:intergenic | 50.0% | |
| TGTTAAGAAGGTGGCCCGTA+AGG | - | tig0023712:70216-70235 | Msa1411000:intron | 50.0% | |
| ! | AAGGGGTAATGGCCTGATTG+CGG | - | tig0023712:70859-70878 | Msa1411000:CDS | 50.0% |
| ! | AAATGGGTAGTGAGGGGCAT+GGG | + | tig0023712:70891-70910 | None:intergenic | 50.0% |
| CCCTCACTACCCATTTCACA+AGG | - | tig0023712:70895-70914 | Msa1411000:CDS | 50.0% | |
| GCAGAATCTAAGGAGGGTTC+CGG | - | tig0023712:71031-71050 | Msa1411000:five_prime_UTR | 50.0% | |
| ! | ACTGCCTTACTGGTCTCCTT+CGG | + | tig0023712:71064-71083 | None:intergenic | 50.0% |
| CTTCACCTTCTCCACTGCTT+CGG | + | tig0023712:71089-71108 | None:intergenic | 50.0% | |
| GAAGCAGTGGAGAAGGTGAA+GGG | - | tig0023712:71088-71107 | Msa1411000:intron | 50.0% | |
| AAGCAGTGGAGAAGGTGAAG+GGG | - | tig0023712:71089-71108 | Msa1411000:intron | 50.0% | |
| GGGGGGATCTAGATTGGTAA+TGG | - | tig0023712:71108-71127 | Msa1411000:intron | 50.0% | |
| !!! | GCTGCTGTTTTGGCTGATGA+GGG | - | tig0023712:71262-71281 | Msa1411000:intron | 50.0% |
| TGATGAGGGACCTATCATGG+AGG | - | tig0023712:71276-71295 | Msa1411000:intron | 50.0% | |
| TCGACTCCATCCTCCATGAT+AGG | + | tig0023712:71289-71308 | None:intergenic | 50.0% | |
| TATCATGGAGGATGGAGTCG+AGG | - | tig0023712:71288-71307 | Msa1411000:intron | 50.0% | |
| GGATGAGGACAATGAGGATG+AGG | - | tig0023712:71312-71331 | Msa1411000:intron | 50.0% | |
| GTTAGCGACAATGGCGGCTT+CGG | - | tig0023712:66278-66297 | Msa1411000:CDS | 55.0% | |
| ATTTCAGACTCTGCTGCGCC+AGG | + | tig0023712:66896-66915 | None:intergenic | 55.0% | |
| GTGGGCCACTGCCTTGTATT+CGG | - | tig0023712:67242-67261 | Msa1411000:intron | 55.0% | |
| TGAAGCCTTCTTTGGCCCCT+AGG | - | tig0023712:67792-67811 | Msa1411000:intron | 55.0% | |
| ! | ATTAGCTCTTCGAGCAGGCG+AGG | + | tig0023712:68315-68334 | None:intergenic | 55.0% |
| TCACTGCATGTACCCATGCC+TGG | - | tig0023712:68519-68538 | Msa1411000:intron | 55.0% | |
| CACGGAATGCTCAGGGACAT+GGG | - | tig0023712:69268-69287 | Msa1411000:CDS | 55.0% | |
| ATCCTTAGCCCCCCTAGCTA+AGG | - | tig0023712:69455-69474 | Msa1411000:intron | 55.0% | |
| TCCTTAGCCCCCCTAGCTAA+GGG | - | tig0023712:69456-69475 | Msa1411000:intron | 55.0% | |
| ACCACAACCCTTAGCTAGGG+GGG | + | tig0023712:69466-69485 | None:intergenic | 55.0% | |
| CACCACAACCCTTAGCTAGG+GGG | + | tig0023712:69467-69486 | None:intergenic | 55.0% | |
| AGAGGAACAGCCTGCATAGG+AGG | + | tig0023712:70118-70137 | None:intergenic | 55.0% | |
| CTGAGAGGAACAGCCTGCAT+AGG | + | tig0023712:70121-70140 | None:intergenic | 55.0% | |
| ACTACCGGTGGATCACCTGA+AGG | - | tig0023712:70151-70170 | Msa1411000:CDS | 55.0% | |
| GTAGCTAGCTAGCTACTCGG+TGG | - | tig0023712:70386-70405 | Msa1411000:CDS | 55.0% | |
| GCCATCAGTCACAACGCTGT+GGG | + | tig0023712:70501-70520 | None:intergenic | 55.0% | |
| AGCCATCAGTCACAACGCTG+TGG | + | tig0023712:70502-70521 | None:intergenic | 55.0% | |
| GATCCCATGCTCACGACTGT+CGG | - | tig0023712:70582-70601 | Msa1411000:intron | 55.0% | |
| CTTCCGACAGTCGTGAGCAT+GGG | + | tig0023712:70588-70607 | None:intergenic | 55.0% | |
| ACTTCCGACAGTCGTGAGCA+TGG | + | tig0023712:70589-70608 | None:intergenic | 55.0% | |
| TGCTCACGACTGTCGGAAGT+TGG | - | tig0023712:70589-70608 | Msa1411000:intron | 55.0% | |
| ! | AATGGGTAGTGAGGGGCATG+GGG | + | tig0023712:70890-70909 | None:intergenic | 55.0% |
| GAAATGGGTAGTGAGGGGCA+TGG | + | tig0023712:70892-70911 | None:intergenic | 55.0% | |
| AAGCCCGAAGGAGACCAGTA+AGG | - | tig0023712:71057-71076 | Msa1411000:intron | 55.0% | |
| ! | CTGCCTTACTGGTCTCCTTC+GGG | + | tig0023712:71063-71082 | None:intergenic | 55.0% |
| TGCTTCGGCAACTGCCTTAC+TGG | + | tig0023712:71074-71093 | None:intergenic | 55.0% | |
| TAAGGCAGTTGCCGAAGCAG+TGG | - | tig0023712:71075-71094 | Msa1411000:intron | 55.0% | |
| AGTTGCCGAAGCAGTGGAGA+AGG | - | tig0023712:71081-71100 | Msa1411000:intron | 55.0% | |
| CGAAGCAGTGGAGAAGGTGA+AGG | - | tig0023712:71087-71106 | Msa1411000:intron | 55.0% | |
| AGCAGTGGAGAAGGTGAAGG+GGG | - | tig0023712:71090-71109 | Msa1411000:intron | 55.0% | |
| GGTGAAGGGGGGATCTAGAT+TGG | - | tig0023712:71102-71121 | Msa1411000:intron | 55.0% | |
| AAGTTCCAGGCCCCATCAGA+GGG | - | tig0023712:71133-71152 | Msa1411000:intron | 55.0% | |
| ACTCTTGGTTGGGCTGTGAC+AGG | - | tig0023712:71188-71207 | Msa1411000:intron | 55.0% | |
| !!! | GTTTTGAAACGAACCCGGGC+TGG | - | tig0023712:71232-71251 | Msa1411000:intron | 55.0% |
| !! | TGGCACTAGGGCTGCTGTTT+TGG | - | tig0023712:71252-71271 | Msa1411000:intron | 55.0% |
| !!! | GGCTGCTGTTTTGGCTGATG+AGG | - | tig0023712:71261-71280 | Msa1411000:intron | 55.0% |
| GGCTGATGAGGGACCTATCA+TGG | - | tig0023712:71273-71292 | Msa1411000:intron | 55.0% | |
| GAGGGACCTATCATGGAGGA+TGG | - | tig0023712:71280-71299 | Msa1411000:intron | 55.0% | |
| CGAGGAGGATGAGGACAATG+AGG | - | tig0023712:71306-71325 | Msa1411000:intron | 55.0% | |
| GGCGAAGCAGCTGAAAGTTC+TGG | - | tig0023712:71436-71455 | Msa1411000:intron | 55.0% | |
| TGGCCATCCTGATGGCAGAC+AGG | - | tig0023712:67163-67182 | Msa1411000:intron | 60.0% | |
| CCATGTCCCTGAGCATTCCG+TGG | + | tig0023712:69270-69289 | None:intergenic | 60.0% | |
| CCACGGAATGCTCAGGGACA+TGG | - | tig0023712:69267-69286 | Msa1411000:CDS | 60.0% | |
| GGAATGCTCAGGGACATGGG+TGG | - | tig0023712:69271-69290 | Msa1411000:CDS | 60.0% | |
| AGCTCAACCACACCGATCGC+AGG | + | tig0023712:69303-69322 | None:intergenic | 60.0% | |
| ACCCTTAGCTAGGGGGGCTA+AGG | + | tig0023712:69460-69479 | None:intergenic | 60.0% | |
| GCCCACAGCGTTGTGACTGA+TGG | - | tig0023712:70497-70516 | Msa1411000:intron | 60.0% | |
| ! | GTAGTGAGGGGCATGGGGAA+GGG | + | tig0023712:70885-70904 | None:intergenic | 60.0% |
| GCAGTGGAGAAGGTGAAGGG+GGG | - | tig0023712:71091-71110 | Msa1411000:intron | 60.0% | |
| CAAGTTCCAGGCCCCATCAG+AGG | - | tig0023712:71132-71151 | Msa1411000:intron | 60.0% | |
| AGTTACCCTCTGATGGGGCC+TGG | + | tig0023712:71141-71160 | None:intergenic | 60.0% | |
| CATGGAGGATGGAGTCGAGG+AGG | - | tig0023712:71291-71310 | Msa1411000:intron | 60.0% | |
| GGATGGAGTCGAGGAGGATG+AGG | - | tig0023712:71297-71316 | Msa1411000:intron | 60.0% | |
| AGCGACAATGGCGGCTTCGG+AGG | - | tig0023712:66281-66300 | Msa1411000:CDS | 65.0% | |
| GGGTGGCTGAGACCTGCGAT+CGG | - | tig0023712:69288-69307 | Msa1411000:CDS | 65.0% | |
| GCTGAGACCTGCGATCGGTG+TGG | - | tig0023712:69293-69312 | Msa1411000:CDS | 65.0% | |
| GCCCCCCTAGCTAAGGGTTG+TGG | - | tig0023712:69462-69481 | Msa1411000:intron | 65.0% | |
| CATGGGGAAGGGCCGCAATC+AGG | + | tig0023712:70874-70893 | None:intergenic | 65.0% | |
| ! | GGTAGTGAGGGGCATGGGGA+AGG | + | tig0023712:70886-70905 | None:intergenic | 65.0% |
| ! | GGTCTCCTTCGGGCTTGCTC+CGG | + | tig0023712:71053-71072 | None:intergenic | 65.0% |
| !! | AACGAACCCGGGCTGGCACT+AGG | - | tig0023712:71239-71258 | Msa1411000:intron | 65.0% |
| !! | ACGAACCCGGGCTGGCACTA+GGG | - | tig0023712:71240-71259 | Msa1411000:intron | 65.0% |
| GGGTTCCGGAGCAAGCCCGA+AGG | - | tig0023712:71045-71064 | Msa1411000:five_prime_UTR | 70.0% | |
| AGCAGCCCTAGTGCCAGCCC+GGG | + | tig0023712:71248-71267 | None:intergenic | 70.0% | |
| CAGCAGCCCTAGTGCCAGCC+CGG | + | tig0023712:71249-71268 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023712 | gene | 65523 | 71781 | 65523 | ID=Msa1411000;Name=Msa1411000 |
| tig0023712 | mRNA | 65523 | 71781 | 65523 | ID=Msa1411000-mRNA-1;Parent=Msa1411000;Name=Msa1411000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=169|1|1|1|0.9|0.81|11|307|685 |
| tig0023712 | exon | 65523 | 66663 | 65523 | ID=Msa1411000-mRNA-1:exon:19848;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 67067 | 67177 | 67067 | ID=Msa1411000-mRNA-1:exon:19847;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 67963 | 68049 | 67963 | ID=Msa1411000-mRNA-1:exon:19846;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 68966 | 69085 | 68966 | ID=Msa1411000-mRNA-1:exon:19845;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 69207 | 69384 | 69207 | ID=Msa1411000-mRNA-1:exon:19844;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 69491 | 69708 | 69491 | ID=Msa1411000-mRNA-1:exon:19843;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 70120 | 70226 | 70120 | ID=Msa1411000-mRNA-1:exon:19842;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 70330 | 70450 | 70330 | ID=Msa1411000-mRNA-1:exon:19841;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 70612 | 70707 | 70612 | ID=Msa1411000-mRNA-1:exon:19840;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 70831 | 71065 | 70831 | ID=Msa1411000-mRNA-1:exon:19839;Parent=Msa1411000-mRNA-1 |
| tig0023712 | exon | 71662 | 71781 | 71662 | ID=Msa1411000-mRNA-1:exon:19838;Parent=Msa1411000-mRNA-1 |
| tig0023712 | five_prime_UTR | 71662 | 71781 | 71662 | ID=Msa1411000-mRNA-1:five_prime_utr;Parent=Msa1411000-mRNA-1 |
| tig0023712 | five_prime_UTR | 71017 | 71065 | 71017 | ID=Msa1411000-mRNA-1:five_prime_utr;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 70831 | 71016 | 70831 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 70612 | 70707 | 70612 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 70330 | 70450 | 70330 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 70120 | 70226 | 70120 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 69491 | 69708 | 69491 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 69207 | 69384 | 69207 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 68966 | 69085 | 68966 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 67963 | 68049 | 67963 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 67067 | 67177 | 67067 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | CDS | 65830 | 66663 | 65830 | ID=Msa1411000-mRNA-1:cds;Parent=Msa1411000-mRNA-1 |
| tig0023712 | three_prime_UTR | 65523 | 65829 | 65523 | ID=Msa1411000-mRNA-1:three_prime_utr;Parent=Msa1411000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
