Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037710 | AES61886.2 | 98.226 | 902 | 16 | 0 | 2 | 903 | 99 | 1000 | 0.0 | 1805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037710 | Msa0129630 | 0.813637 | 2.313957e-51 | -8.615850e-47 |
| Msa0037710 | Msa1412420 | 0.819855 | 9.325781e-53 | -8.615850e-47 |
| Msa0037710 | Msa1427870 | 0.814292 | 1.659762e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037710 | MtrunA17_Chr1g0196651 | 98.226 | 902 | 16 | 0 | 2 | 903 | 133 | 1034 | 0.0 | 1805 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037710 | AT1G04650.1 | 41.222 | 900 | 495 | 9 | 2 | 891 | 122 | 997 | 0.0 | 660 |
| Msa0037710 | AT1G04650.2 | 41.176 | 901 | 496 | 9 | 1 | 891 | 19 | 895 | 0.0 | 659 |
Find 142 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACTATCACTTCATTT+TGG | 0.164804 | 1_1:+66833580 | Msa0037710:CDS |
| CAAGCTTGAGAGAATATTTA+AGG | 0.171347 | 1_1:-66833902 | None:intergenic |
| CGACTTCCATGCTATTTAAT+TGG | 0.194433 | 1_1:-66835673 | None:intergenic |
| GTTAATGAAGATTCTCATTC+TGG | 0.243809 | 1_1:+66833753 | Msa0037710:CDS |
| TTATGTTCTGCAGCTTCTTT+TGG | 0.246930 | 1_1:+66832377 | None:intergenic |
| TCTAGTGATCATTTCATATC+TGG | 0.247729 | 1_1:+66835112 | Msa0037710:CDS |
| TCCTTCCTCATTCTTCCTTC+AGG | 0.255774 | 1_1:+66834312 | Msa0037710:CDS |
| CGATTACTCAGAAGCTTAAT+TGG | 0.262276 | 1_1:+66833943 | Msa0037710:CDS |
| TCATCCTCACTTCCTTTGTT+TGG | 0.264775 | 1_1:+66834172 | Msa0037710:CDS |
| CAGCATTGACTGAAATGTTA+TGG | 0.283833 | 1_1:-66835607 | None:intergenic |
| TTGCAACTTCCATCATTATC+TGG | 0.286370 | 1_1:+66834014 | Msa0037710:CDS |
| CAATTCCTTGTTACTAATAT+CGG | 0.290844 | 1_1:-66832448 | None:intergenic |
| CTTTCATATGATATAATTTC+AGG | 0.293788 | 1_1:+66835446 | Msa0037710:CDS |
| CATTTAGCATTAACTGCATT+TGG | 0.306514 | 1_1:+66835362 | Msa0037710:CDS |
| AATATCTGATAAACTAAAAC+TGG | 0.307618 | 1_1:+66833698 | Msa0037710:CDS |
| AAGCAGAAAATTCAATCATT+TGG | 0.307925 | 1_1:+66833051 | Msa0037710:intron |
| CGTAGCAGCTCAAGCTGTTC+AGG | 0.310698 | 1_1:-66835554 | None:intergenic |
| TGCGTTCTGAATTAATAAAC+TGG | 0.317909 | 1_1:+66833133 | Msa0037710:CDS |
| GGAGGAAACAACCTTGGATT+TGG | 0.320498 | 1_1:+66833662 | Msa0037710:CDS |
| GTTGTTTCTTTGCTTCAAAT+TGG | 0.328294 | 1_1:+66833318 | Msa0037710:CDS |
| TTTCTGTAACTGAAGCTAAA+AGG | 0.334035 | 1_1:+66833457 | Msa0037710:CDS |
| AAGCTGATGCTGAAAATCTT+AGG | 0.334216 | 1_1:-66832404 | None:intergenic |
| ATTTGGATCAGAGATATTAA+AGG | 0.341131 | 1_1:+66833068 | Msa0037710:CDS |
| AATTACTCACTTCGAGGAAT+TGG | 0.343356 | 1_1:+66835877 | Msa0037710:CDS |
| GCATGCTCCTCCGGTTTGTT+TGG | 0.344036 | 1_1:+66834575 | Msa0037710:CDS |
| CAAAGAAACAACACCTTTCC+AGG | 0.352316 | 1_1:-66833307 | None:intergenic |
| GTACAAATGCAAACCACATT+TGG | 0.371106 | 1_1:+66835217 | Msa0037710:CDS |
| TTTCTTTGCTTCAAATTGGT+GGG | 0.374180 | 1_1:+66833322 | Msa0037710:CDS |
| ATAGAAAAGCTGTCTCAAAT+TGG | 0.376969 | 1_1:+66833234 | Msa0037710:CDS |
| TACTGTTGACAAAGAAATAA+AGG | 0.379756 | 1_1:+66835061 | Msa0037710:CDS |
| GTGGTTTGCATTTGTACAAA+AGG | 0.397409 | 1_1:-66835211 | None:intergenic |
| AGCAGTGATAGCGGAGCTAT+TGG | 0.398983 | 1_1:+66833641 | Msa0037710:CDS |
| TGAAATGTGCTGCTGAGGTT+TGG | 0.402761 | 1_1:+66833412 | Msa0037710:CDS |
| TGATCTTGACAGAGCGGCAC+TGG | 0.406282 | 1_1:+66835330 | Msa0037710:CDS |
| TCATTGACGGCATGCTCCTC+CGG | 0.409903 | 1_1:+66834566 | Msa0037710:CDS |
| AGCTCAAGCTGTTCAGGACT+TGG | 0.411704 | 1_1:-66835548 | None:intergenic |
| TGTTTGGCTCTGTTCATTGA+AGG | 0.412535 | 1_1:+66834446 | Msa0037710:CDS |
| ATACTTGACATGCAGTTCAT+TGG | 0.417288 | 1_1:-66835825 | None:intergenic |
| TCAATATTCTTAGTATCTCC+TGG | 0.423343 | 1_1:+66833289 | Msa0037710:CDS |
| CTTTAATGAAGCTTCATTGA+CGG | 0.432701 | 1_1:+66834553 | Msa0037710:CDS |
| ATAGCATGGACAACATGAAT+AGG | 0.438166 | 1_1:-66833192 | None:intergenic |
| TATTAGTAACAAGGAATTGA+TGG | 0.445950 | 1_1:+66832452 | Msa0037710:CDS |
| GGAACAGAAGCTTGAGGTAG+TGG | 0.446616 | 1_1:+66833719 | Msa0037710:CDS |
| TTCTTTGCTTCAAATTGGTG+GGG | 0.449517 | 1_1:+66833323 | Msa0037710:CDS |
| CCTCGCAAATTGCTCTGAAT+AGG | 0.459283 | 1_1:-66835926 | None:intergenic |
| ATGGCCCTTGCATCAATCTC+AGG | 0.459700 | 1_1:-66835002 | None:intergenic |
| ATGTTCATTACTTAAGCTGT+TGG | 0.460578 | 1_1:+66834271 | Msa0037710:CDS |
| ACTCCTTTGCTAATTCCTGC+TGG | 0.462429 | 1_1:-66835731 | None:intergenic |
| ACTCACTTCGAGGAATTGGC+TGG | 0.466064 | 1_1:+66835881 | Msa0037710:CDS |
| TGTTCATTACTTAAGCTGTT+GGG | 0.467901 | 1_1:+66834272 | Msa0037710:CDS |
| CTTCCATCATTATCTGGCTC+TGG | 0.468283 | 1_1:+66834020 | Msa0037710:CDS |
| GAGAGATGGATGTGAGAGCA+TGG | 0.468330 | 1_1:+66835634 | Msa0037710:CDS |
| GTTTCTTTGCTTCAAATTGG+TGG | 0.468414 | 1_1:+66833321 | Msa0037710:CDS |
| CGATCAAGAGTACTAATACT+TGG | 0.468752 | 1_1:+66833855 | Msa0037710:CDS |
| TCTTTGCTTCAAATTGGTGG+GGG | 0.472659 | 1_1:+66833324 | Msa0037710:CDS |
| GCAATATGCTGAAACACAAA+TGG | 0.474449 | 1_1:+66834226 | Msa0037710:CDS |
| AACTGGAATGCCAAACAAAC+CGG | 0.477551 | 1_1:-66834585 | None:intergenic |
| TGGAGATTGTGATGCAATGC+TGG | 0.478103 | 1_1:+66834192 | Msa0037710:CDS |
| CAAATCGAATGATATTGAAC+AGG | 0.484736 | 1_1:+66835145 | Msa0037710:CDS |
| ACTATAAAACATACATCAAA+GGG | 0.486154 | 1_1:-66835956 | None:intergenic |
| TACTATAAAACATACATCAA+AGG | 0.505082 | 1_1:-66835957 | None:intergenic |
| AAATAAAGGACCATTCTCTT+CGG | 0.505358 | 1_1:+66835075 | Msa0037710:CDS |
| TATCTTTATCACTGAGCCTC+CGG | 0.505702 | 1_1:+66835187 | Msa0037710:CDS |
| CTCTTCAAGTACAGCTTGGA+GGG | 0.511034 | 1_1:+66834118 | Msa0037710:CDS |
| GAGGTGTTTATGTCAATTGT+TGG | 0.511061 | 1_1:+66834392 | Msa0037710:CDS |
| TTGCATTTGTACAAAAGGAC+CGG | 0.513377 | 1_1:-66835206 | None:intergenic |
| ATCAGACCTACACAGTGTAC+AGG | 0.514130 | 1_1:+66833541 | Msa0037710:CDS |
| CAGCTAATGTTGGACAATCA+AGG | 0.514656 | 1_1:-66833776 | None:intergenic |
| TTCGAGGAATTGGCTGGGAG+TGG | 0.516686 | 1_1:+66835887 | Msa0037710:CDS |
| CTTTGCTTCAAATTGGTGGG+GGG | 0.516713 | 1_1:+66833325 | Msa0037710:CDS |
| TGATCTCTTCAAGTACAGCT+TGG | 0.518395 | 1_1:+66834114 | Msa0037710:CDS |
| TTGATCAGGTAAAATTTCAC+TGG | 0.518498 | 1_1:-66833489 | None:intergenic |
| CATTTGGCTCAGTTCCTCAC+TGG | 0.520913 | 1_1:+66835233 | Msa0037710:CDS |
| AAAGAAGTTCTCTAGTAAGA+AGG | 0.520959 | 1_1:-66834150 | None:intergenic |
| TTTCCAGAGCCAGATAATGA+TGG | 0.524410 | 1_1:-66834023 | None:intergenic |
| AGTGAATATAGCAAATATAG+TGG | 0.524490 | 1_1:+66833359 | Msa0037710:CDS |
| GCCTTTGAAATGTGCTGCTG+AGG | 0.526380 | 1_1:+66833407 | Msa0037710:CDS |
| ACACAACTTGCTGTCAGCTA+TGG | 0.527197 | 1_1:+66835399 | Msa0037710:CDS |
| GGTGTTCTTGCTGCGAATGA+TGG | 0.535515 | 1_1:+66833255 | Msa0037710:CDS |
| TCATATGAAAGTGCTGCATC+CGG | 0.537804 | 1_1:-66835434 | None:intergenic |
| GTTTGGCTCTGTTCATTGAA+GGG | 0.538387 | 1_1:+66834447 | Msa0037710:CDS |
| AGCTGCTTGTAACTTTACAT+TGG | 0.538952 | 1_1:+66833794 | Msa0037710:CDS |
| CAAGAACCAATTAAATAGCA+TGG | 0.540142 | 1_1:+66835667 | Msa0037710:CDS |
| TCTCTTCAAGTACAGCTTGG+AGG | 0.545970 | 1_1:+66834117 | Msa0037710:CDS |
| GCTATTGGAGGAAACAACCT+TGG | 0.546923 | 1_1:+66833656 | Msa0037710:CDS |
| GTCAATGCTGAAAGGAGAGA+TGG | 0.547419 | 1_1:+66835620 | Msa0037710:CDS |
| CAAGTATTAGTACTCTTGAT+CGG | 0.548577 | 1_1:-66833854 | None:intergenic |
| TGAAGAGATCACAATCATGA+AGG | 0.554036 | 1_1:-66834102 | None:intergenic |
| TTATGTCAATTGTTGGTGAT+CGG | 0.555097 | 1_1:+66834399 | Msa0037710:CDS |
| AGATGCAATTACTCACTTCG+AGG | 0.557847 | 1_1:+66835871 | Msa0037710:CDS |
| AGCAGCACATTTCAAAGGCT+CGG | 0.559189 | 1_1:-66833403 | None:intergenic |
| AGTGATAGCGGAGCTATTGG+AGG | 0.566440 | 1_1:+66833644 | Msa0037710:CDS |
| TGATCTTGTCAATTTCCTGA+AGG | 0.568673 | 1_1:-66834327 | None:intergenic |
| GATCTTGACAGAGCGGCACT+GGG | 0.570474 | 1_1:+66835331 | Msa0037710:CDS |
| ACACACGGTCATTGATGTTG+TGG | 0.571789 | 1_1:+66833095 | Msa0037710:CDS |
| TTCAGGAACAGAGACAACTA+AGG | 0.578649 | 1_1:+66835463 | Msa0037710:CDS |
| TCCTGAAGGAAGAATGAGGA+AGG | 0.581242 | 1_1:-66834313 | None:intergenic |
| AAGTTACAAGCAGCTAATGT+TGG | 0.581575 | 1_1:-66833786 | None:intergenic |
| ATTCTTAGTATCTCCTGGAA+AGG | 0.582974 | 1_1:+66833294 | Msa0037710:CDS |
| CTTGAGCTGCTACGACGAGA+AGG | 0.597587 | 1_1:+66835563 | Msa0037710:CDS |
| AACATCAATGACCGTGTGTG+CGG | 0.598742 | 1_1:-66833091 | None:intergenic |
| CTCACTTCGAGGAATTGGCT+GGG | 0.601390 | 1_1:+66835882 | Msa0037710:CDS |
| ACTACCTGAGATTGATGCAA+GGG | 0.602615 | 1_1:+66834998 | Msa0037710:CDS |
| AGCAGGAATTAGCAAAGGAG+TGG | 0.605019 | 1_1:+66835733 | Msa0037710:CDS |
| CCTCACTGGACTTGTTCACA+TGG | 0.605363 | 1_1:+66835247 | Msa0037710:CDS |
| ACCTCAGCAGCACATTTCAA+AGG | 0.607870 | 1_1:-66833408 | None:intergenic |
| ATCTCCAAACAAAGGAAGTG+AGG | 0.608558 | 1_1:-66834176 | None:intergenic |
| TCAGACCTACACAGTGTACA+GGG | 0.610865 | 1_1:+66833542 | Msa0037710:CDS |
| GCTATGGAGATTTCTTCCAC+CGG | 0.617902 | 1_1:+66835415 | Msa0037710:CDS |
| GATATTAAAGGCCGCACACA+CGG | 0.619564 | 1_1:+66833080 | Msa0037710:CDS |
| ACATTTCAGTCAATGCTGAA+AGG | 0.623736 | 1_1:+66835612 | Msa0037710:CDS |
| AATTTCCTGAAGGAAGAATG+AGG | 0.624738 | 1_1:-66834317 | None:intergenic |
| AGATTCTATATCTGAAGCCA+AGG | 0.626301 | 1_1:+66832518 | Msa0037710:CDS |
| GACTACCTGAGATTGATGCA+AGG | 0.626991 | 1_1:+66834997 | Msa0037710:CDS |
| GATCTCCCTGTACACTGTGT+AGG | 0.630525 | 1_1:-66833547 | None:intergenic |
| CAAAGACAACACCAAATCCA+AGG | 0.631055 | 1_1:-66833673 | None:intergenic |
| GCATCACAATCTCCAAACAA+AGG | 0.634537 | 1_1:-66834184 | None:intergenic |
| GGTTTGAAGATTATTGGTGA+CGG | 0.634783 | 1_1:+66835770 | Msa0037710:CDS |
| TATGAAAGTGCTGCATCCGG+TGG | 0.636471 | 1_1:-66835431 | None:intergenic |
| ATGAGGAAGGAAAACTGAGT+CGG | 0.636841 | 1_1:-66834300 | None:intergenic |
| ATATTCTCTCAAGCTTGACG+AGG | 0.641799 | 1_1:+66833908 | Msa0037710:CDS |
| AAATGCATCAGCAGTGATAG+CGG | 0.641985 | 1_1:+66833632 | Msa0037710:CDS |
| CTTCCAGCAGGAATTAGCAA+AGG | 0.643071 | 1_1:+66835728 | Msa0037710:CDS |
| GTGAGGAACTGAGCCAAATG+TGG | 0.646782 | 1_1:-66835230 | None:intergenic |
| GTTCTTGCTGCGAATGATGG+TGG | 0.648182 | 1_1:+66833258 | Msa0037710:CDS |
| CATTTGTACAAAAGGACCGG+AGG | 0.648541 | 1_1:-66835203 | None:intergenic |
| AGGAAGGAAAACTGAGTCGG+AGG | 0.649594 | 1_1:-66834297 | None:intergenic |
| ATTCACCGATATTAGTAACA+AGG | 0.649686 | 1_1:+66832443 | Msa0037710:CDS |
| AGAAGCTTGAGGTAGTGGAA+TGG | 0.649896 | 1_1:+66833724 | Msa0037710:CDS |
| GCGTTCTGAATTAATAAACT+GGG | 0.651433 | 1_1:+66833134 | Msa0037710:CDS |
| TTCACTTGATCTTGACAGAG+CGG | 0.651465 | 1_1:+66835324 | Msa0037710:CDS |
| GGAATTGGCTGGGAGTGGTG+AGG | 0.656699 | 1_1:+66835892 | Msa0037710:CDS |
| TACACTGTGTAGGTCTGATG+AGG | 0.659409 | 1_1:-66833537 | None:intergenic |
| TTCTGAATTAATAAACTGGG+AGG | 0.670862 | 1_1:+66833137 | Msa0037710:CDS |
| AAAACTGGAACAGAAGCTTG+AGG | 0.694528 | 1_1:+66833713 | Msa0037710:CDS |
| TTGGTGACGGTCTTTCAGAG+TGG | 0.702019 | 1_1:+66835783 | Msa0037710:CDS |
| TGCAAGAGGAGAGTAAACAT+AGG | 0.703321 | 1_1:-66834068 | None:intergenic |
| CCTATTCAGAGCAATTTGCG+AGG | 0.706579 | 1_1:+66835926 | Msa0037710:CDS |
| TGGAATGCCAAACAAACCGG+AGG | 0.710686 | 1_1:-66834582 | None:intergenic |
| TGTTGTGGTAAAGCTATGCA+AGG | 0.718673 | 1_1:+66833110 | Msa0037710:CDS |
| CCATGTGAACAAGTCCAGTG+AGG | 0.723530 | 1_1:-66835247 | None:intergenic |
| AATATCGGTGAATTTCAACA+AGG | 0.727967 | 1_1:-66832433 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTATATATATAAAT+AGG | - | chr1_1:66834687-66834706 | None:intergenic | 0.0% |
| !! | ATGATAAATTTAAACATTCA+AGG | - | chr1_1:66832878-66832897 | None:intergenic | 15.0% |
| !! | TTATTGTCATTATATGATCT+AGG | + | chr1_1:66832594-66832613 | Msa0037710:intron | 20.0% |
| !! | AGTGTAAATATGAAATGAAT+GGG | - | chr1_1:66832986-66833005 | None:intergenic | 20.0% |
| !! | AATATCTGATAAACTAAAAC+TGG | + | chr1_1:66833698-66833717 | Msa0037710:CDS | 20.0% |
| !! | TATAAATAGGCATGTAATAA+TGG | - | chr1_1:66834674-66834693 | None:intergenic | 20.0% |
| !! | ATGAATCAACAGTAATTAAT+AGG | - | chr1_1:66834712-66834731 | None:intergenic | 20.0% |
| !! | AATTGAAACCAAAAACTTTA+TGG | - | chr1_1:66835024-66835043 | None:intergenic | 20.0% |
| !!! | GATATTTTCAATCTGTATTA+TGG | - | chr1_1:66835171-66835190 | None:intergenic | 20.0% |
| !! | CTTTCATATGATATAATTTC+AGG | + | chr1_1:66835446-66835465 | Msa0037710:CDS | 20.0% |
| !! | TGAACCAAACAAATAAAAAA+AGG | + | chr1_1:66835702-66835721 | Msa0037710:CDS | 20.0% |
| !!! | GTTTCCTTTTTTTATTTGTT+TGG | - | chr1_1:66835709-66835728 | None:intergenic | 20.0% |
| !! | ACTATAAAACATACATCAAA+GGG | - | chr1_1:66835959-66835978 | None:intergenic | 20.0% |
| !! | TACTATAAAACATACATCAA+AGG | - | chr1_1:66835960-66835979 | None:intergenic | 20.0% |
| !!! | ATTAAATTTTACTGAACATC+TGG | - | chr1_1:66836028-66836047 | None:intergenic | 20.0% |
| ! | CAATTCCTTGTTACTAATAT+CGG | - | chr1_1:66832451-66832470 | None:intergenic | 25.0% |
| ! | TATTAGTAACAAGGAATTGA+TGG | + | chr1_1:66832452-66832471 | Msa0037710:CDS | 25.0% |
| ! | TAGAGATGATGTAATCAAAA+AGG | - | chr1_1:66832651-66832670 | None:intergenic | 25.0% |
| ! | ATTTAAGCAGTTATCAAAGT+CGG | - | chr1_1:66832711-66832730 | None:intergenic | 25.0% |
| !! | TTGATTCTCAATTGATGTTT+TGG | - | chr1_1:66832774-66832793 | None:intergenic | 25.0% |
| ! | CAGTGTAAATATGAAATGAA+TGG | - | chr1_1:66832987-66833006 | None:intergenic | 25.0% |
| !! | AATGATTGAATTTTCTGCTT+AGG | - | chr1_1:66833051-66833070 | None:intergenic | 25.0% |
| ! | AAGCAGAAAATTCAATCATT+TGG | + | chr1_1:66833051-66833070 | Msa0037710:intron | 25.0% |
| ! | ATTTGGATCAGAGATATTAA+AGG | + | chr1_1:66833068-66833087 | Msa0037710:CDS | 25.0% |
| !!! | ATTTTGTTATGTTGATAGCA+TGG | - | chr1_1:66833209-66833228 | None:intergenic | 25.0% |
| ! | AGTGAATATAGCAAATATAG+TGG | + | chr1_1:66833359-66833378 | Msa0037710:CDS | 25.0% |
| !!! | ATATTTTAACTGCATTGATC+AGG | - | chr1_1:66833506-66833525 | None:intergenic | 25.0% |
| ! | TGCAATCAATGTAAGTAATT+TGG | + | chr1_1:66834639-66834658 | Msa0037710:intron | 25.0% |
| ! | AAAGTAAAACATATGCATGT+GGG | - | chr1_1:66834863-66834882 | None:intergenic | 25.0% |
| ! | AAAAGTAAAACATATGCATG+TGG | - | chr1_1:66834864-66834883 | None:intergenic | 25.0% |
| !! | ACATGCATATGTTTTACTTT+TGG | + | chr1_1:66834863-66834882 | Msa0037710:intron | 25.0% |
| !!! | ATATGTTTTACTTTTGGACT+TGG | + | chr1_1:66834869-66834888 | Msa0037710:intron | 25.0% |
| ! | TACTGTTGACAAAGAAATAA+AGG | + | chr1_1:66835061-66835080 | Msa0037710:CDS | 25.0% |
| ! | AAAAACGGTTTGAAGATTAT+TGG | + | chr1_1:66835764-66835783 | Msa0037710:CDS | 25.0% |
| ! | ATTTTCAGCATCAGCTTTTT+CGG | + | chr1_1:66832410-66832429 | Msa0037710:CDS | 30.0% |
| AATATCGGTGAATTTCAACA+AGG | - | chr1_1:66832436-66832455 | None:intergenic | 30.0% | |
| ATTCACCGATATTAGTAACA+AGG | + | chr1_1:66832443-66832462 | Msa0037710:CDS | 30.0% | |
| CAGGAAGAAAAATATTACCT+TGG | - | chr1_1:66832538-66832557 | None:intergenic | 30.0% | |
| AATTGTCAAGTTTCATACAC+AGG | - | chr1_1:66832557-66832576 | None:intergenic | 30.0% | |
| TGTGTATGAAACTTGACAAT+TGG | + | chr1_1:66832556-66832575 | Msa0037710:intron | 30.0% | |
| TTAAATATCAAACCTGTCTG+TGG | + | chr1_1:66832725-66832744 | Msa0037710:intron | 30.0% | |
| TCAAAGGACTGATAAATCAT+TGG | - | chr1_1:66832806-66832825 | None:intergenic | 30.0% | |
| AATGATTTATCAGTCCTTTG+AGG | + | chr1_1:66832805-66832824 | Msa0037710:intron | 30.0% | |
| TAAACATTCAAGGACTTCAT+TGG | - | chr1_1:66832868-66832887 | None:intergenic | 30.0% | |
| !!! | TTTCAGTATTTTTAGTCGTG+TGG | + | chr1_1:66832897-66832916 | Msa0037710:intron | 30.0% |
| AATGGGAGAAATTTCATCAT+TGG | - | chr1_1:66832969-66832988 | None:intergenic | 30.0% | |
| ! | TGCGTTCTGAATTAATAAAC+TGG | + | chr1_1:66833133-66833152 | Msa0037710:CDS | 30.0% |
| ! | GCGTTCTGAATTAATAAACT+GGG | + | chr1_1:66833134-66833153 | Msa0037710:CDS | 30.0% |
| TTCTGAATTAATAAACTGGG+AGG | + | chr1_1:66833137-66833156 | Msa0037710:CDS | 30.0% | |
| ATAGAAAAGCTGTCTCAAAT+TGG | + | chr1_1:66833234-66833253 | Msa0037710:CDS | 30.0% | |
| TCAATATTCTTAGTATCTCC+TGG | + | chr1_1:66833289-66833308 | Msa0037710:CDS | 30.0% | |
| !! | GTTGTTTCTTTGCTTCAAAT+TGG | + | chr1_1:66833318-66833337 | Msa0037710:CDS | 30.0% |
| TTTCTTTGCTTCAAATTGGT+GGG | + | chr1_1:66833322-66833341 | Msa0037710:CDS | 30.0% | |
| TTTCTGTAACTGAAGCTAAA+AGG | + | chr1_1:66833457-66833476 | Msa0037710:CDS | 30.0% | |
| TTGATCAGGTAAAATTTCAC+TGG | - | chr1_1:66833492-66833511 | None:intergenic | 30.0% | |
| ! | TTCTCACTATCACTTCATTT+TGG | + | chr1_1:66833580-66833599 | Msa0037710:CDS | 30.0% |
| ! | TCTCACTATCACTTCATTTT+GGG | + | chr1_1:66833581-66833600 | Msa0037710:CDS | 30.0% |
| GTTAATGAAGATTCTCATTC+TGG | + | chr1_1:66833753-66833772 | Msa0037710:CDS | 30.0% | |
| CAAGTATTAGTACTCTTGAT+CGG | - | chr1_1:66833857-66833876 | None:intergenic | 30.0% | |
| CAAGCTTGAGAGAATATTTA+AGG | - | chr1_1:66833905-66833924 | None:intergenic | 30.0% | |
| !!! | TCAGAAGCTTAATTGGTTTT+TGG | + | chr1_1:66833950-66833969 | Msa0037710:CDS | 30.0% |
| !!! | GTTTTTGGATGTTTTAGTTG+AGG | + | chr1_1:66833965-66833984 | Msa0037710:CDS | 30.0% |
| AAAGAAGTTCTCTAGTAAGA+AGG | - | chr1_1:66834153-66834172 | None:intergenic | 30.0% | |
| ATGTTCATTACTTAAGCTGT+TGG | + | chr1_1:66834271-66834290 | Msa0037710:CDS | 30.0% | |
| TGTTCATTACTTAAGCTGTT+GGG | + | chr1_1:66834272-66834291 | Msa0037710:CDS | 30.0% | |
| !! | TTATGTCAATTGTTGGTGAT+CGG | + | chr1_1:66834399-66834418 | Msa0037710:CDS | 30.0% |
| ! | CTTGTCACAAATTTTGTGTT+TGG | + | chr1_1:66834430-66834449 | Msa0037710:CDS | 30.0% |
| CTTTAATGAAGCTTCATTGA+CGG | + | chr1_1:66834553-66834572 | Msa0037710:CDS | 30.0% | |
| TATCAAAGACTCCTAAATCT+TGG | + | chr1_1:66834809-66834828 | Msa0037710:intron | 30.0% | |
| ! | GATTTTTGCTTCCAAGATTT+AGG | - | chr1_1:66834823-66834842 | None:intergenic | 30.0% |
| TGGAATCAGAATGATAATTC+TGG | - | chr1_1:66834938-66834957 | None:intergenic | 30.0% | |
| AAATGGGAACACTATTCTTA+AGG | - | chr1_1:66834962-66834981 | None:intergenic | 30.0% | |
| AAATAAAGGACCATTCTCTT+CGG | + | chr1_1:66835075-66835094 | Msa0037710:CDS | 30.0% | |
| TCTAGTGATCATTTCATATC+TGG | + | chr1_1:66835112-66835131 | Msa0037710:CDS | 30.0% | |
| CAAATCGAATGATATTGAAC+AGG | + | chr1_1:66835145-66835164 | Msa0037710:CDS | 30.0% | |
| ! | GAATTTTCAGAAAGTGATGA+TGG | + | chr1_1:66835269-66835288 | Msa0037710:CDS | 30.0% |
| CATTTAGCATTAACTGCATT+TGG | + | chr1_1:66835362-66835381 | Msa0037710:CDS | 30.0% | |
| CAAGAACCAATTAAATAGCA+TGG | + | chr1_1:66835667-66835686 | Msa0037710:CDS | 30.0% | |
| AAGCTGATGCTGAAAATCTT+AGG | - | chr1_1:66832407-66832426 | None:intergenic | 35.0% | |
| ! | AGATTCTATATCTGAAGCCA+AGG | + | chr1_1:66832518-66832537 | Msa0037710:CDS | 35.0% |
| GTATGAAACTTGACAATTGG+AGG | + | chr1_1:66832559-66832578 | Msa0037710:intron | 35.0% | |
| CACAAGTCTCAAAATATCAG+CGG | - | chr1_1:66832833-66832852 | None:intergenic | 35.0% | |
| GTTCGATGATAGTTAATGCT+AGG | + | chr1_1:66832921-66832940 | Msa0037710:intron | 35.0% | |
| ATAGCATGGACAACATGAAT+AGG | - | chr1_1:66833195-66833214 | None:intergenic | 35.0% | |
| ATTCTTAGTATCTCCTGGAA+AGG | + | chr1_1:66833294-66833313 | Msa0037710:CDS | 35.0% | |
| GTTTCTTTGCTTCAAATTGG+TGG | + | chr1_1:66833321-66833340 | Msa0037710:CDS | 35.0% | |
| TTCTTTGCTTCAAATTGGTG+GGG | + | chr1_1:66833323-66833342 | Msa0037710:CDS | 35.0% | |
| AAGTTACAAGCAGCTAATGT+TGG | - | chr1_1:66833789-66833808 | None:intergenic | 35.0% | |
| AGCTGCTTGTAACTTTACAT+TGG | + | chr1_1:66833794-66833813 | Msa0037710:CDS | 35.0% | |
| !! | CGATCAAGAGTACTAATACT+TGG | + | chr1_1:66833855-66833874 | Msa0037710:CDS | 35.0% |
| CGATTACTCAGAAGCTTAAT+TGG | + | chr1_1:66833943-66833962 | Msa0037710:CDS | 35.0% | |
| TTGCAACTTCCATCATTATC+TGG | + | chr1_1:66834014-66834033 | Msa0037710:CDS | 35.0% | |
| TGAAGAGATCACAATCATGA+AGG | - | chr1_1:66834105-66834124 | None:intergenic | 35.0% | |
| GCAATATGCTGAAACACAAA+TGG | + | chr1_1:66834226-66834245 | Msa0037710:CDS | 35.0% | |
| AATTTCCTGAAGGAAGAATG+AGG | - | chr1_1:66834320-66834339 | None:intergenic | 35.0% | |
| TGATCTTGTCAATTTCCTGA+AGG | - | chr1_1:66834330-66834349 | None:intergenic | 35.0% | |
| AACCTGTTGTGAAAAATCAG+TGG | + | chr1_1:66834364-66834383 | Msa0037710:CDS | 35.0% | |
| !!! | AACCACTGATTTTTCACAAC+AGG | - | chr1_1:66834369-66834388 | None:intergenic | 35.0% |
| TGAAAAATCAGTGGTTGAAG+AGG | + | chr1_1:66834373-66834392 | Msa0037710:CDS | 35.0% | |
| ! | GAGGTGTTTATGTCAATTGT+TGG | + | chr1_1:66834392-66834411 | Msa0037710:CDS | 35.0% |
| GAAGCAGAGAGAATAAAAAC+TGG | - | chr1_1:66834605-66834624 | None:intergenic | 35.0% | |
| GTGAAGGGATAAAAGAAATC+AGG | - | chr1_1:66834911-66834930 | None:intergenic | 35.0% | |
| !! | GATAATTCTGGTTCAGTGAA+GGG | - | chr1_1:66834926-66834945 | None:intergenic | 35.0% |
| !! | TGATAATTCTGGTTCAGTGA+AGG | - | chr1_1:66834927-66834946 | None:intergenic | 35.0% |
| CTTTCCTTGCTGCATAAAAT+GGG | - | chr1_1:66834978-66834997 | None:intergenic | 35.0% | |
| TCTTTCCTTGCTGCATAAAA+TGG | - | chr1_1:66834979-66834998 | None:intergenic | 35.0% | |
| TTGCATTTGTACAAAAGGAC+CGG | - | chr1_1:66835209-66835228 | None:intergenic | 35.0% | |
| ! | GTGGTTTGCATTTGTACAAA+AGG | - | chr1_1:66835214-66835233 | None:intergenic | 35.0% |
| GTACAAATGCAAACCACATT+TGG | + | chr1_1:66835217-66835236 | Msa0037710:CDS | 35.0% | |
| !! | CAGCATTGACTGAAATGTTA+TGG | - | chr1_1:66835610-66835629 | None:intergenic | 35.0% |
| ACATTTCAGTCAATGCTGAA+AGG | + | chr1_1:66835612-66835631 | Msa0037710:CDS | 35.0% | |
| ! | CGACTTCCATGCTATTTAAT+TGG | - | chr1_1:66835676-66835695 | None:intergenic | 35.0% |
| AAAAAAAGGAAACTTCCAGC+AGG | + | chr1_1:66835716-66835735 | Msa0037710:CDS | 35.0% | |
| GGTTTGAAGATTATTGGTGA+CGG | + | chr1_1:66835770-66835789 | Msa0037710:CDS | 35.0% | |
| ATACTTGACATGCAGTTCAT+TGG | - | chr1_1:66835828-66835847 | None:intergenic | 35.0% | |
| AATTACTCACTTCGAGGAAT+TGG | + | chr1_1:66835877-66835896 | Msa0037710:CDS | 35.0% | |
| GTCGGACACTTCAAATAATG+TGG | - | chr1_1:66832693-66832712 | None:intergenic | 40.0% | |
| AAATATCAGCGGTACCTCAA+AGG | - | chr1_1:66832822-66832841 | None:intergenic | 40.0% | |
| !!! | CGCTGATATTTTGAGACTTG+TGG | + | chr1_1:66832831-66832850 | Msa0037710:intron | 40.0% |
| !!! | TTTTGAGACTTGTGGTCTTC+CGG | + | chr1_1:66832839-66832858 | Msa0037710:intron | 40.0% |
| ! | TTTGTATGTGTCGCTAAGCA+TGG | + | chr1_1:66833013-66833032 | Msa0037710:intron | 40.0% |
| TGTTGTGGTAAAGCTATGCA+AGG | + | chr1_1:66833110-66833129 | Msa0037710:CDS | 40.0% | |
| CTTGTGATGAAAAACAGTCG+AGG | + | chr1_1:66833160-66833179 | Msa0037710:CDS | 40.0% | |
| CAAAGAAACAACACCTTTCC+AGG | - | chr1_1:66833310-66833329 | None:intergenic | 40.0% | |
| TCTTTGCTTCAAATTGGTGG+GGG | + | chr1_1:66833324-66833343 | Msa0037710:CDS | 40.0% | |
| AAATGCATCAGCAGTGATAG+CGG | + | chr1_1:66833632-66833651 | Msa0037710:CDS | 40.0% | |
| CAAAGACAACACCAAATCCA+AGG | - | chr1_1:66833676-66833695 | None:intergenic | 40.0% | |
| AAAACTGGAACAGAAGCTTG+AGG | + | chr1_1:66833713-66833732 | Msa0037710:CDS | 40.0% | |
| CAGCTAATGTTGGACAATCA+AGG | - | chr1_1:66833779-66833798 | None:intergenic | 40.0% | |
| ATATTCTCTCAAGCTTGACG+AGG | + | chr1_1:66833908-66833927 | Msa0037710:CDS | 40.0% | |
| TTTCCAGAGCCAGATAATGA+TGG | - | chr1_1:66834026-66834045 | None:intergenic | 40.0% | |
| TGCAAGAGGAGAGTAAACAT+AGG | - | chr1_1:66834071-66834090 | None:intergenic | 40.0% | |
| !!! | AGGTTTTGAATGCTTGCAAG+AGG | - | chr1_1:66834085-66834104 | None:intergenic | 40.0% |
| TGATCTCTTCAAGTACAGCT+TGG | + | chr1_1:66834114-66834133 | Msa0037710:CDS | 40.0% | |
| TCATCCTCACTTCCTTTGTT+TGG | + | chr1_1:66834172-66834191 | Msa0037710:CDS | 40.0% | |
| ATCTCCAAACAAAGGAAGTG+AGG | - | chr1_1:66834179-66834198 | None:intergenic | 40.0% | |
| GCATCACAATCTCCAAACAA+AGG | - | chr1_1:66834187-66834206 | None:intergenic | 40.0% | |
| ATGAGGAAGGAAAACTGAGT+CGG | - | chr1_1:66834303-66834322 | None:intergenic | 40.0% | |
| !! | TGTTTGGCTCTGTTCATTGA+AGG | + | chr1_1:66834446-66834465 | Msa0037710:CDS | 40.0% |
| !! | GTTTGGCTCTGTTCATTGAA+GGG | + | chr1_1:66834447-66834466 | Msa0037710:CDS | 40.0% |
| AACTGGAATGCCAAACAAAC+CGG | - | chr1_1:66834588-66834607 | None:intergenic | 40.0% | |
| GGGAACACTATTCTTAAGGT+TGG | - | chr1_1:66834958-66834977 | None:intergenic | 40.0% | |
| ! | TGTTCCCATTTTATGCAGCA+AGG | + | chr1_1:66834971-66834990 | Msa0037710:intron | 40.0% |
| ACTACCTGAGATTGATGCAA+GGG | + | chr1_1:66834998-66835017 | Msa0037710:CDS | 40.0% | |
| ! | TGCAAGGGCCATAAAGTTTT+TGG | + | chr1_1:66835013-66835032 | Msa0037710:CDS | 40.0% |
| TATCTTTATCACTGAGCCTC+CGG | + | chr1_1:66835187-66835206 | Msa0037710:CDS | 40.0% | |
| TTCACTTGATCTTGACAGAG+CGG | + | chr1_1:66835324-66835343 | Msa0037710:CDS | 40.0% | |
| !! | TCATATGAAAGTGCTGCATC+CGG | - | chr1_1:66835437-66835456 | None:intergenic | 40.0% |
| TTCAGGAACAGAGACAACTA+AGG | + | chr1_1:66835463-66835482 | Msa0037710:CDS | 40.0% | |
| GGAGTGGAATTGCTGAAAAA+CGG | + | chr1_1:66835749-66835768 | Msa0037710:CDS | 40.0% | |
| AGATGCAATTACTCACTTCG+AGG | + | chr1_1:66835871-66835890 | Msa0037710:CDS | 40.0% | |
| TCAGTCATGTATCCACAGAC+AGG | - | chr1_1:66832740-66832759 | None:intergenic | 45.0% | |
| TCTGTGGATACATGACTGAG+TGG | + | chr1_1:66832741-66832760 | Msa0037710:intron | 45.0% | |
| ! | TTTGAGACTTGTGGTCTTCC+GGG | + | chr1_1:66832840-66832859 | Msa0037710:intron | 45.0% |
| TCAAGGACTTCATTGGAACC+CGG | - | chr1_1:66832861-66832880 | None:intergenic | 45.0% | |
| GATATTAAAGGCCGCACACA+CGG | + | chr1_1:66833080-66833099 | Msa0037710:CDS | 45.0% | |
| AACATCAATGACCGTGTGTG+CGG | - | chr1_1:66833094-66833113 | None:intergenic | 45.0% | |
| ACACACGGTCATTGATGTTG+TGG | + | chr1_1:66833095-66833114 | Msa0037710:CDS | 45.0% | |
| CTTTGCTTCAAATTGGTGGG+GGG | + | chr1_1:66833325-66833344 | Msa0037710:CDS | 45.0% | |
| AGCAGCACATTTCAAAGGCT+CGG | - | chr1_1:66833406-66833425 | None:intergenic | 45.0% | |
| ACCTCAGCAGCACATTTCAA+AGG | - | chr1_1:66833411-66833430 | None:intergenic | 45.0% | |
| ! | TGAAATGTGCTGCTGAGGTT+TGG | + | chr1_1:66833412-66833431 | Msa0037710:CDS | 45.0% |
| TACACTGTGTAGGTCTGATG+AGG | - | chr1_1:66833540-66833559 | None:intergenic | 45.0% | |
| ATCAGACCTACACAGTGTAC+AGG | + | chr1_1:66833541-66833560 | Msa0037710:CDS | 45.0% | |
| TCAGACCTACACAGTGTACA+GGG | + | chr1_1:66833542-66833561 | Msa0037710:CDS | 45.0% | |
| GCTATTGGAGGAAACAACCT+TGG | + | chr1_1:66833656-66833675 | Msa0037710:CDS | 45.0% | |
| GGAGGAAACAACCTTGGATT+TGG | + | chr1_1:66833662-66833681 | Msa0037710:CDS | 45.0% | |
| !! | AGAAGCTTGAGGTAGTGGAA+TGG | + | chr1_1:66833724-66833743 | Msa0037710:CDS | 45.0% |
| ! | CTTCCATCATTATCTGGCTC+TGG | + | chr1_1:66834020-66834039 | Msa0037710:CDS | 45.0% |
| ! | CTCTGGAAAAACAGCTGAAC+TGG | + | chr1_1:66834037-66834056 | Msa0037710:CDS | 45.0% |
| GAAAAACAGCTGAACTGGTG+TGG | + | chr1_1:66834042-66834061 | Msa0037710:CDS | 45.0% | |
| TCTCTTCAAGTACAGCTTGG+AGG | + | chr1_1:66834117-66834136 | Msa0037710:CDS | 45.0% | |
| CTCTTCAAGTACAGCTTGGA+GGG | + | chr1_1:66834118-66834137 | Msa0037710:CDS | 45.0% | |
| TGGAGATTGTGATGCAATGC+TGG | + | chr1_1:66834192-66834211 | Msa0037710:CDS | 45.0% | |
| TCCTTCCTCATTCTTCCTTC+AGG | + | chr1_1:66834312-66834331 | Msa0037710:CDS | 45.0% | |
| TCCTGAAGGAAGAATGAGGA+AGG | - | chr1_1:66834316-66834335 | None:intergenic | 45.0% | |
| TGCATGTGGGAGATCAAACT+CGG | - | chr1_1:66834850-66834869 | None:intergenic | 45.0% | |
| GACTACCTGAGATTGATGCA+AGG | + | chr1_1:66834997-66835016 | Msa0037710:CDS | 45.0% | |
| ! | GACCATTCTCTTCGGCTTTT+TGG | + | chr1_1:66835083-66835102 | Msa0037710:CDS | 45.0% |
| CACCAAAAAGCCGAAGAGAA+TGG | - | chr1_1:66835088-66835107 | None:intergenic | 45.0% | |
| CATTTGTACAAAAGGACCGG+AGG | - | chr1_1:66835206-66835225 | None:intergenic | 45.0% | |
| ATGCAAAAAGTCGTGCTGCA+TGG | + | chr1_1:66835294-66835313 | Msa0037710:CDS | 45.0% | |
| TGCAAAAAGTCGTGCTGCAT+GGG | + | chr1_1:66835295-66835314 | Msa0037710:CDS | 45.0% | |
| !! | ACACAACTTGCTGTCAGCTA+TGG | + | chr1_1:66835399-66835418 | Msa0037710:CDS | 45.0% |
| GCTATGGAGATTTCTTCCAC+CGG | + | chr1_1:66835415-66835434 | Msa0037710:CDS | 45.0% | |
| GTCAATGCTGAAAGGAGAGA+TGG | + | chr1_1:66835620-66835639 | Msa0037710:CDS | 45.0% | |
| CTTCCAGCAGGAATTAGCAA+AGG | + | chr1_1:66835728-66835747 | Msa0037710:CDS | 45.0% | |
| ACTCCTTTGCTAATTCCTGC+TGG | - | chr1_1:66835734-66835753 | None:intergenic | 45.0% | |
| AGCAGGAATTAGCAAAGGAG+TGG | + | chr1_1:66835733-66835752 | Msa0037710:CDS | 45.0% | |
| ! | CCTCGCAAATTGCTCTGAAT+AGG | - | chr1_1:66835929-66835948 | None:intergenic | 45.0% |
| CCTATTCAGAGCAATTTGCG+AGG | + | chr1_1:66835926-66835945 | Msa0037710:CDS | 45.0% | |
| GTGGATACATGACTGAGTGG+AGG | + | chr1_1:66832744-66832763 | Msa0037710:intron | 50.0% | |
| GGTGTTCTTGCTGCGAATGA+TGG | + | chr1_1:66833255-66833274 | Msa0037710:CDS | 50.0% | |
| GTTCTTGCTGCGAATGATGG+TGG | + | chr1_1:66833258-66833277 | Msa0037710:CDS | 50.0% | |
| !! | GCCTTTGAAATGTGCTGCTG+AGG | + | chr1_1:66833407-66833426 | Msa0037710:CDS | 50.0% |
| GATCTCCCTGTACACTGTGT+AGG | - | chr1_1:66833550-66833569 | None:intergenic | 50.0% | |
| !! | AGCAGTGATAGCGGAGCTAT+TGG | + | chr1_1:66833641-66833660 | Msa0037710:CDS | 50.0% |
| !! | AGTGATAGCGGAGCTATTGG+AGG | + | chr1_1:66833644-66833663 | Msa0037710:CDS | 50.0% |
| GGAACAGAAGCTTGAGGTAG+TGG | + | chr1_1:66833719-66833738 | Msa0037710:CDS | 50.0% | |
| AGGAAGGAAAACTGAGTCGG+AGG | - | chr1_1:66834300-66834319 | None:intergenic | 50.0% | |
| TGGAATGCCAAACAAACCGG+AGG | - | chr1_1:66834585-66834604 | None:intergenic | 50.0% | |
| ATGGCCCTTGCATCAATCTC+AGG | - | chr1_1:66835005-66835024 | None:intergenic | 50.0% | |
| GTGAGGAACTGAGCCAAATG+TGG | - | chr1_1:66835233-66835252 | None:intergenic | 50.0% | |
| ! | CATTTGGCTCAGTTCCTCAC+TGG | + | chr1_1:66835233-66835252 | Msa0037710:CDS | 50.0% |
| CCATGTGAACAAGTCCAGTG+AGG | - | chr1_1:66835250-66835269 | None:intergenic | 50.0% | |
| ! | CCTCACTGGACTTGTTCACA+TGG | + | chr1_1:66835247-66835266 | Msa0037710:CDS | 50.0% |
| !! | TATGAAAGTGCTGCATCCGG+TGG | - | chr1_1:66835434-66835453 | None:intergenic | 50.0% |
| AGCTCAAGCTGTTCAGGACT+TGG | - | chr1_1:66835551-66835570 | None:intergenic | 50.0% | |
| GAGAGATGGATGTGAGAGCA+TGG | + | chr1_1:66835634-66835653 | Msa0037710:CDS | 50.0% | |
| !! | TTGGTGACGGTCTTTCAGAG+TGG | + | chr1_1:66835783-66835802 | Msa0037710:CDS | 50.0% |
| ACTCACTTCGAGGAATTGGC+TGG | + | chr1_1:66835881-66835900 | Msa0037710:CDS | 50.0% | |
| CTCACTTCGAGGAATTGGCT+GGG | + | chr1_1:66835882-66835901 | Msa0037710:CDS | 50.0% | |
| TCATTGACGGCATGCTCCTC+CGG | + | chr1_1:66834566-66834585 | Msa0037710:CDS | 55.0% | |
| ! | GCATGCTCCTCCGGTTTGTT+TGG | + | chr1_1:66834575-66834594 | Msa0037710:CDS | 55.0% |
| TGATCTTGACAGAGCGGCAC+TGG | + | chr1_1:66835330-66835349 | Msa0037710:CDS | 55.0% | |
| GATCTTGACAGAGCGGCACT+GGG | + | chr1_1:66835331-66835350 | Msa0037710:CDS | 55.0% | |
| CGTAGCAGCTCAAGCTGTTC+AGG | - | chr1_1:66835557-66835576 | None:intergenic | 55.0% | |
| CTTGAGCTGCTACGACGAGA+AGG | + | chr1_1:66835563-66835582 | Msa0037710:CDS | 55.0% | |
| TTCGAGGAATTGGCTGGGAG+TGG | + | chr1_1:66835887-66835906 | Msa0037710:CDS | 55.0% | |
| GGAATTGGCTGGGAGTGGTG+AGG | + | chr1_1:66835892-66835911 | Msa0037710:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 66832384 | 66836047 | 66832384 | ID=Msa0037710;Name=Msa0037710 |
| chr1_1 | mRNA | 66832384 | 66836047 | 66832384 | ID=Msa0037710-mRNA-1;Parent=Msa0037710;Name=Msa0037710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.33|1|1|1|3|95|903 |
| chr1_1 | exon | 66832384 | 66832539 | 66832384 | ID=Msa0037710-mRNA-1:exon:21620;Parent=Msa0037710-mRNA-1 |
| chr1_1 | exon | 66833057 | 66834648 | 66833057 | ID=Msa0037710-mRNA-1:exon:21621;Parent=Msa0037710-mRNA-1 |
| chr1_1 | exon | 66834989 | 66836047 | 66834989 | ID=Msa0037710-mRNA-1:exon:21622;Parent=Msa0037710-mRNA-1 |
| chr1_1 | CDS | 66832384 | 66832539 | 66832384 | ID=Msa0037710-mRNA-1:cds;Parent=Msa0037710-mRNA-1 |
| chr1_1 | CDS | 66833057 | 66834648 | 66833057 | ID=Msa0037710-mRNA-1:cds;Parent=Msa0037710-mRNA-1 |
| chr1_1 | CDS | 66834989 | 66835952 | 66834989 | ID=Msa0037710-mRNA-1:cds;Parent=Msa0037710-mRNA-1 |
| chr1_1 | three_prime_UTR | 66835953 | 66836047 | 66835953 | ID=Msa0037710-mRNA-1:three_prime_utr;Parent=Msa0037710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
