AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0038920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038920 MtrunA17_Chr1g0202741 97.721 702 16 0 1 702 1 702 0.0 1418
Msa0038920 MtrunA17_Chr1g0202731 86.648 704 92 1 1 702 4 707 0.0 1271
Msa0038920 MtrunA17_Chr8g0348531 54.825 684 302 5 23 702 36 716 0.0 729
Msa0038920 MtrunA17_Chr8g0348521 53.541 706 319 7 1 702 1 701 0.0 727
Msa0038920 MtrunA17_Chr8g0349071 57.237 304 126 3 232 533 2 303 3.15e-109 333
Msa0038920 MtrunA17_Chr4g0058571 31.983 716 431 19 1 685 13 703 1.55e-107 343
Msa0038920 MtrunA17_Chr2g0291481 31.526 701 438 14 26 701 56 739 3.72e-106 339
Msa0038920 MtrunA17_Chr8g0349081 60.656 122 47 1 581 702 1 121 2.41e-47 163
Msa0038920 MtrunA17_Chr8g0349061 37.857 140 86 1 1 140 1 139 7.00e-27 107
Msa0038920 MtrunA17_Chr4g0061441 30.435 207 124 6 262 450 473 677 5.20e-21 98.2
Msa0038920 MtrunA17_Chr8g0385411 27.586 232 129 6 257 451 508 737 4.37e-20 95.5
Msa0038920 MtrunA17_Chr8g0387591 28.440 218 117 7 260 444 552 763 9.77e-20 94.4
Msa0038920 MtrunA17_Chr2g0301511 28.761 226 125 8 260 453 541 762 7.81e-19 91.7
Msa0038920 MtrunA17_Chr3g0131361 27.679 224 120 7 267 451 522 742 2.09e-18 90.1
Msa0038920 MtrunA17_Chr1g0192121 25.328 229 134 6 258 451 500 726 4.17e-18 89.0
Msa0038920 MtrunA17_Chr3g0131401 26.126 222 123 7 267 451 541 758 7.38e-18 88.2
Msa0038920 MtrunA17_Chr7g0272591 25.806 217 127 5 267 451 524 738 2.95e-17 86.3
Msa0038920 MtrunA17_Chr3g0131381 26.872 227 128 6 260 451 527 750 1.09e-16 84.7
Msa0038920 MtrunA17_Chr7g0238371 26.840 231 120 8 267 451 469 696 3.50e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038920 AT5G23980.1 58.757 708 276 9 2 702 1 699 0.0 854
Msa0038920 AT5G23990.2 57.910 708 282 8 2 702 1 699 0.0 852
Msa0038920 AT1G01580.2 51.213 701 331 7 10 702 106 803 0.0 736
Msa0038920 AT1G01580.1 51.213 701 331 7 10 702 28 725 0.0 736
Msa0038920 AT5G23990.3 61.871 556 205 4 153 702 13 567 0.0 733
Msa0038920 AT5G23990.1 61.913 554 204 4 155 702 105 657 0.0 726
Msa0038920 AT1G01590.1 48.305 708 334 10 9 702 15 704 0.0 692
Msa0038920 AT1G23020.1 47.218 701 341 11 9 702 38 716 0.0 656
Msa0038920 AT1G23020.5 47.218 701 341 11 9 702 38 716 0.0 656
Msa0038920 AT1G23020.2 47.218 701 342 10 9 702 38 717 0.0 656
Msa0038920 AT1G23020.6 47.218 701 342 10 9 702 15 694 0.0 656
Msa0038920 AT1G23020.4 47.218 701 341 11 9 702 15 693 0.0 655
Msa0038920 AT1G23020.3 47.218 701 341 11 9 702 15 693 0.0 655
Msa0038920 AT1G23020.7 47.076 701 339 11 9 702 15 690 0.0 653
Msa0038920 AT5G50160.1 32.148 731 427 20 18 701 19 727 3.59e-114 360
Msa0038920 AT5G49740.1 31.787 733 439 18 9 701 35 746 2.31e-106 340
Msa0038920 AT5G49730.1 31.001 729 448 15 9 701 28 737 2.67e-101 327
Msa0038920 AT5G49740.3 31.195 686 421 16 9 664 35 699 6.58e-99 320
Msa0038920 AT5G49740.2 34.247 511 312 8 9 501 35 539 3.95e-91 295
Msa0038920 AT5G50160.2 32.860 563 317 16 185 701 1 548 2.00e-89 290
Msa0038920 AT5G49730.2 33.855 511 312 7 9 501 28 530 1.95e-88 287
Msa0038920 AT1G19230.1 28.571 224 125 8 260 451 536 756 7.54e-21 98.6
Msa0038920 AT1G19230.2 28.571 224 125 8 260 451 562 782 8.83e-21 98.2
Msa0038920 AT4G25090.1 31.280 211 116 8 267 451 484 691 1.00e-20 97.8
Msa0038920 AT4G25090.2 31.280 211 116 8 267 451 472 679 1.04e-20 97.8
Msa0038920 AT1G64060.1 27.650 217 120 6 260 444 558 769 3.24e-20 96.3
Msa0038920 AT1G09090.2 27.511 229 128 9 257 450 465 690 7.95e-19 91.7
Msa0038920 AT4G11230.1 26.791 321 180 13 256 535 539 845 1.51e-18 90.9
Msa0038920 AT5G47910.1 26.941 219 126 5 258 444 543 759 8.34e-18 88.6
Msa0038920 AT5G51060.1 26.606 218 124 6 267 451 531 745 1.26e-17 88.2
Msa0038920 AT5G07390.1 25.943 212 120 6 267 444 522 730 1.05e-16 85.1
Msa0038920 AT5G07390.2 25.943 212 120 6 267 444 490 698 1.28e-16 84.7
Msa0038920 AT1G09090.1 28.859 149 89 7 257 391 465 610 7.71e-12 68.9

Find 140 sgRNAs with CRISPR-Local

Find 866 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTATGCTTCCTGTTTC+TGG 0.045402 1_1:+68422998 Msa0038920:CDS
CCAAGCCATAACCAGTTATT+TGG 0.139470 1_1:-68423172 None:intergenic
GATTCTCCTATGTTATAATT+AGG 0.201329 1_1:+68423919 Msa0038920:three_prime_UTR
AGAACTTTCTTCTTCATCTT+TGG 0.207308 1_1:+68422357 Msa0038920:CDS
CAACTAGAAGACACCGTAAA+AGG 0.252647 1_1:-68422265 None:intergenic
CAAGCTACCAATGTACATTT+TGG 0.258420 1_1:+68423508 Msa0038920:CDS
CACATTCTGCACAATTTCTA+AGG 0.259434 1_1:+68422416 Msa0038920:CDS
TCACCAGGGTCATGGATTTA+TGG 0.263989 1_1:+68423442 Msa0038920:CDS
GTTCTAGCGTTGTATTTCTT+TGG 0.265827 1_1:+68423353 Msa0038920:CDS
ATTCTATCACCTCTTGTTAC+TGG 0.280615 1_1:-68414581 None:intergenic
GGTGTCTTCTAGTTGTAATT+TGG 0.286944 1_1:+68422273 Msa0038920:CDS
CTGGCTTGGGCAATTATCTA+TGG 0.296562 1_1:+68419973 Msa0038920:CDS
CAAGGGCATCACAAGGTAAA+AGG 0.320473 1_1:-68421928 None:intergenic
AAATTATTAAGTGCAACTTT+TGG 0.323174 1_1:-68424028 None:intergenic
TCTCCTATCTCAGCTGTATT+AGG 0.324457 1_1:+68423148 Msa0038920:CDS
AACGAGTAACAATTCCTAAA+AGG 0.325542 1_1:-68423231 None:intergenic
TCTCGCCTTCTTTGTGCATA+TGG 0.327570 1_1:-68413905 None:intergenic
TAGAATTTGTGCTTCTGGTT+TGG 0.336429 1_1:+68423783 Msa0038920:CDS
TAACAAGCATTCCACGAATA+AGG 0.339631 1_1:+68421723 Msa0038920:CDS
GTTGCTAGAATTTGTGCTTC+TGG 0.342401 1_1:+68423778 Msa0038920:CDS
ATACAAACAAGTAGGAGTTT+TGG 0.349336 1_1:-68422944 None:intergenic
TTCTTGGATGGCTAACAGTT+TGG 0.352809 1_1:+68413270 Msa0038920:CDS
AGGCAAAGATGTTGGAGTTA+TGG 0.357291 1_1:+68423726 Msa0038920:CDS
GTACAGTGATGCAACATTAT+AGG 0.357711 1_1:-68423847 None:intergenic
TGTTTCTGAGTATCTCTTGA+AGG 0.360719 1_1:-68423088 None:intergenic
ACATTCCCTATGATGTTCAT+TGG 0.361666 1_1:+68413550 Msa0038920:CDS
GCTGAAACAATTCCAATTGT+AGG 0.367850 1_1:-68413798 None:intergenic
CAAGCATCAAATATCATATC+TGG 0.370925 1_1:+68419954 Msa0038920:CDS
TAGGCCCAAATAACTGGTTA+TGG 0.371532 1_1:+68423167 Msa0038920:CDS
ACACAGGTGAAGTGTATAAC+TGG 0.374089 1_1:+68423278 Msa0038920:CDS
CTGTATTAGGCCCAAATAAC+TGG 0.374198 1_1:+68423161 Msa0038920:CDS
AGAAACAAATCCAAACTATA+TGG 0.376017 1_1:+68423104 Msa0038920:CDS
AGAGCTCCAATGAACATCAT+AGG 0.376728 1_1:-68413556 None:intergenic
CATTGCAGCTTGGAAACCTT+TGG 0.378460 1_1:-68422238 None:intergenic
GGCGAGATTGTAAGAATCTA+AGG 0.379884 1_1:-68421880 None:intergenic
ATTGAGCTTGATTTCTAGCT+TGG 0.383594 1_1:-68413333 None:intergenic
TTTCCTGAGACGTCCATTCC+TGG 0.389736 1_1:+68413770 Msa0038920:CDS
GGTGTCTATCAATGAGGAAT+AGG 0.392092 1_1:-68421859 None:intergenic
ATCAAATATCATATCTGGCT+TGG 0.394614 1_1:+68419959 Msa0038920:CDS
ATACTATAACCCCACAAGTT+TGG 0.395633 1_1:+68422201 Msa0038920:CDS
CATATGGAGGTGAGCAAAAC+TGG 0.398421 1_1:-68413889 None:intergenic
GTAGATGGGAAGCGAAGTTC+AGG 0.406799 1_1:+68414501 Msa0038920:intron
GAGGTTGAAATTCTTGTTGT+TGG 0.408231 1_1:-68422922 None:intergenic
TGAGTTGTTGAACCAGAAAC+AGG 0.415265 1_1:-68423010 None:intergenic
TCTTCCATTCTACGTCTTGT+TGG 0.419851 1_1:+68419917 Msa0038920:CDS
CAAGCCATAACCAGTTATTT+GGG 0.427027 1_1:-68423171 None:intergenic
TATTGTCTTACTAGGATCCT+TGG 0.429043 1_1:-68421963 None:intergenic
TTCCTGGTCATGCCTACAAT+TGG 0.433473 1_1:+68413786 Msa0038920:CDS
GTGTTTATCTCCATCTTCAT+CGG 0.438108 1_1:+68413584 Msa0038920:CDS
ACATACCTCAACCATTTGAT+TGG 0.438129 1_1:-68420044 None:intergenic
CATCTTAATGTCTCGGTTGA+AGG 0.443438 1_1:+68422382 Msa0038920:CDS
TGTTTATCTCCATCTTCATC+GGG 0.445261 1_1:+68413585 Msa0038920:CDS
CATGACCCTGGTGATCTTGT+TGG 0.446030 1_1:-68423433 None:intergenic
GAAATTCTGTTTGAGTGTAA+AGG 0.455524 1_1:+68423706 Msa0038920:intron
TTGAGCTTGATTTCTAGCTT+GGG 0.460467 1_1:-68413332 None:intergenic
TTTGGATCATCTTAATGTCT+CGG 0.460525 1_1:+68422375 Msa0038920:CDS
GCATAAGATCTAACATGGTT+AGG 0.460957 1_1:-68422985 None:intergenic
AATTGGAATTGTTTCAGCTA+TGG 0.460958 1_1:+68413803 Msa0038920:CDS
TACATCTTACGCCTTATTCG+TGG 0.460998 1_1:-68421734 None:intergenic
ATGATGTTCATTGGAGCTCT+AGG 0.465216 1_1:+68413559 Msa0038920:CDS
TTTATGAACACCAAACTTGT+GGG 0.465358 1_1:-68422211 None:intergenic
TCAAATATCATATCTGGCTT+GGG 0.467506 1_1:+68419960 Msa0038920:CDS
GGGCCTAATACAGCTGAGAT+AGG 0.482185 1_1:-68423151 None:intergenic
CCTGGTGATCTTGTTGGTGT+TGG 0.482209 1_1:-68423427 None:intergenic
TGCAATCTCTCCAGCTACAT+TGG 0.482582 1_1:-68421675 None:intergenic
CCTCACTTACTCTTGAGATC+AGG 0.482923 1_1:-68423538 None:intergenic
GTCTCGGTTGAAGGACCCTA+TGG 0.485389 1_1:+68422391 Msa0038920:CDS
TGACCAGGAATGGACGTCTC+AGG 0.492465 1_1:-68413773 None:intergenic
TTGTGCAGAATGTGGTCCAT+AGG 0.494669 1_1:-68422407 None:intergenic
GATGTTGGAGTTATGGTTTG+TGG 0.495679 1_1:+68423733 Msa0038920:CDS
AAACATGTACCACATAACTT+TGG 0.497140 1_1:-68423305 None:intergenic
TACATGTGCATGATTGCTCC+TGG 0.499735 1_1:+68421830 Msa0038920:CDS
TACAATCTCGCCAACATGCT+CGG 0.502728 1_1:+68421891 Msa0038920:CDS
GAGACCAACAAGACGTAGAA+TGG 0.503751 1_1:-68419921 None:intergenic
AACTAGAAGACACCGTAAAA+GGG 0.507134 1_1:-68422264 None:intergenic
TTGGGGCATCACCAATCAAA+TGG 0.509212 1_1:+68420033 Msa0038920:CDS
AGATATGTATCCAATGTAGC+TGG 0.511036 1_1:+68421665 Msa0038920:CDS
CCAAATAACTGGTTATGGCT+TGG 0.512969 1_1:+68423172 Msa0038920:CDS
CGCCTTCTTTGTGCATATGG+AGG 0.515718 1_1:-68413902 None:intergenic
TCACGGATTATAGATATGAA+TGG 0.518337 1_1:-68422884 None:intergenic
GAGTGTAAAGGCAAAGATGT+TGG 0.518341 1_1:+68423718 Msa0038920:CDS
ATTGTAGGCATGACCAGGAA+TGG 0.518429 1_1:-68413783 None:intergenic
TCATAGGGAATGTGAAAAGC+AGG 0.518452 1_1:-68413540 None:intergenic
ATTTATGAACACCAAACTTG+TGG 0.522214 1_1:-68422212 None:intergenic
GGCTTTGAAATATGAGATCA+CGG 0.523890 1_1:-68422901 None:intergenic
GAGCTCCAATGAACATCATA+GGG 0.528983 1_1:-68413555 None:intergenic
GGTGTTCATAAATGTTCCAA+AGG 0.529380 1_1:+68422222 Msa0038920:CDS
ACATTACCTAATTATAACAT+AGG 0.529748 1_1:-68423925 None:intergenic
AGGTCACCAATTAAAACTGA+TGG 0.530758 1_1:-68423827 None:intergenic
TTACATAGGAAACATATGTT+GGG 0.532430 1_1:+68414544 Msa0038920:CDS
GTGATGGTGAGTGGTGGAAG+TGG 0.534156 1_1:+68422854 Msa0038920:CDS
GTTACATAGGAAACATATGT+TGG 0.535893 1_1:+68414543 Msa0038920:CDS
CCAACACCAACAAGATCACC+AGG 0.536301 1_1:+68423427 Msa0038920:CDS
TGTGCAGAATGTGGTCCATA+GGG 0.536839 1_1:-68422406 None:intergenic
CACCTCCATATGCACAAAGA+AGG 0.544934 1_1:+68413900 Msa0038920:CDS
TTATTCTATGCCATCCATGT+TGG 0.547960 1_1:+68421800 Msa0038920:CDS
AGATATAGAGAATGTAGAGA+TGG 0.551790 1_1:-68421778 None:intergenic
CCTTGGAGAAGTTGAGCTCA+AGG 0.557986 1_1:-68421946 None:intergenic
CTGATAGTAACCGAGCATGT+TGG 0.558645 1_1:-68421901 None:intergenic
AAAAGGGTGCCATTGCAGCT+TGG 0.560802 1_1:-68422248 None:intergenic
CAAAGGTTTCCAAGCTGCAA+TGG 0.560929 1_1:+68422239 Msa0038920:CDS
CAACAAGATCACCAGGGTCA+TGG 0.560968 1_1:+68423434 Msa0038920:CDS
CTTAGAAATTGTGCAGAATG+TGG 0.565118 1_1:-68422415 None:intergenic
CATCACCAATCAAATGGTTG+AGG 0.565173 1_1:+68420039 Msa0038920:CDS
TCTACATACTTCAGAGAGCA+AGG 0.565212 1_1:+68413356 Msa0038920:CDS
TGATTTCCCAGGCGTTAGAG+TGG 0.569832 1_1:+68421636 Msa0038920:intron
TTCCAATTGTAGGCATGACC+AGG 0.569930 1_1:-68413788 None:intergenic
TTGTTCTTTCCAGTAACAAG+AGG 0.575453 1_1:+68414572 Msa0038920:CDS
ATGTAAGCTTCGATTTGTAA+CGG 0.578008 1_1:-68423046 None:intergenic
TGATTGTTAATCAAATCAAA+CGG 0.579471 1_1:-68424114 None:intergenic
ACTGGACTTCCAAAGTTATG+TGG 0.580573 1_1:+68423296 Msa0038920:CDS
AATATACATGCAAAACATAG+AGG 0.581947 1_1:-68423993 None:intergenic
AAACGAATCAACCTTGTGGA+AGG 0.590519 1_1:-68413628 None:intergenic
TTGGATCTTGTTGCCCACAA+AGG 0.591496 1_1:+68413289 Msa0038920:CDS
CACAAAAGTTACCTTCCACA+AGG 0.596116 1_1:+68413617 Msa0038920:CDS
ATGAGGAATAGGAAAATCCC+AGG 0.598597 1_1:-68421848 None:intergenic
AAATGATCCTTAGGAATGTG+TGG 0.600017 1_1:-68413235 None:intergenic
GTATTCAACTCCAACATGGA+TGG 0.603192 1_1:-68421810 None:intergenic
TGAAGAGCCACACATTCCTA+AGG 0.606681 1_1:+68413228 Msa0038920:CDS
CCTTGCACCAAAATGTACAT+TGG 0.609618 1_1:-68423515 None:intergenic
TATCCAATTGAAAATAACAC+AGG 0.610435 1_1:+68423262 Msa0038920:CDS
GCACTAAAGATTGATGAGGA+AGG 0.616155 1_1:-68423486 None:intergenic
TGGAATGCTTGTTATCCACA+TGG 0.616270 1_1:-68421714 None:intergenic
CCTTGAGCTCAACTTCTCCA+AGG 0.626515 1_1:+68421946 Msa0038920:CDS
GTTTAATAGCATTAGCCATG+TGG 0.627630 1_1:+68421699 Msa0038920:CDS
CAGATTGTGATGGTGAGTGG+TGG 0.628879 1_1:+68422848 Msa0038920:CDS
TTATGAACACCAAACTTGTG+GGG 0.629351 1_1:-68422210 None:intergenic
CTTGGAGAAGTTGAGCTCAA+GGG 0.630131 1_1:-68421945 None:intergenic
AGGAAGCATAAGATCTAACA+TGG 0.631448 1_1:-68422990 None:intergenic
ATCTAAGGTGTCTATCAATG+AGG 0.634860 1_1:-68421865 None:intergenic
GAGTAACAATTCCTAAAAGG+AGG 0.636071 1_1:-68423228 None:intergenic
GAGCAGATTGTGATGGTGAG+TGG 0.648818 1_1:+68422845 Msa0038920:CDS
ACATGTGCATGATTGCTCCT+GGG 0.659062 1_1:+68421831 Msa0038920:CDS
GCTTGCACTAAAGATTGATG+AGG 0.661055 1_1:-68423490 None:intergenic
TTGAGCTCAAGGGCATCACA+AGG 0.661183 1_1:-68421935 None:intergenic
GAACCATAAATCCATGACCC+TGG 0.663108 1_1:-68423445 None:intergenic
CTGAGATAGGAGAATCTGAG+AGG 0.667792 1_1:-68423138 None:intergenic
ACATGTATTCAACTCCAACA+TGG 0.684245 1_1:-68421814 None:intergenic
CAGGCATGAGCAGATTGTGA+TGG 0.694392 1_1:+68422838 Msa0038920:intron
CAACACCAACAAGATCACCA+GGG 0.799066 1_1:+68423428 Msa0038920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTTTAATAATTTT+CGG - chr1_1:68416720-68416739 None:intergenic 0.0%
!!! ATTAATTGTTAATGATTTTA+GGG + chr1_1:68413509-68413528 Msa0038920:intron 10.0%
!! AACAAATTATTCTATTAAAT+TGG + chr1_1:68414047-68414066 Msa0038920:intron 10.0%
!!! TTAAACTTTATTTTTTCATT+CGG - chr1_1:68414190-68414209 None:intergenic 10.0%
!! TGAATTGAATAATTATTAAT+CGG - chr1_1:68414255-68414274 None:intergenic 10.0%
!!! ATATTATTATTTTTTCATTC+AGG - chr1_1:68414448-68414467 None:intergenic 10.0%
!! AATAATATACCTTTATAATT+TGG + chr1_1:68414460-68414479 Msa0038920:intron 10.0%
!!! TTTTTTTTTTTTTAATGAGA+GGG - chr1_1:68414872-68414891 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTAATGAG+AGG - chr1_1:68414873-68414892 None:intergenic 10.0%
!!! TAAATTTTTAATAATTTTCG+GGG - chr1_1:68416718-68416737 None:intergenic 10.0%
!!! TTTTATATTTTGCAAAAATT+GGG - chr1_1:68417249-68417268 None:intergenic 10.0%
!!! ATTTTATATTTTGCAAAAAT+TGG - chr1_1:68417250-68417269 None:intergenic 10.0%
!!! TTGATAAGTTAAATATTTTT+CGG - chr1_1:68418066-68418085 None:intergenic 10.0%
!! ATAATAATTAATCTCTTAAT+CGG + chr1_1:68420425-68420444 Msa0038920:intron 10.0%
!!! TTTGACAATTTTATTATTTT+TGG - chr1_1:68420501-68420520 None:intergenic 10.0%
!!! ACATTAATCTTTTTTTTTTA+GGG - chr1_1:68420543-68420562 None:intergenic 10.0%
!!! TACATTAATCTTTTTTTTTT+AGG - chr1_1:68420544-68420563 None:intergenic 10.0%
!!! AAAATAACACAAATATTTTA+GGG + chr1_1:68420652-68420671 Msa0038920:intron 10.0%
!! AAAAAATGAAAATATATGTA+AGG - chr1_1:68421343-68421362 None:intergenic 10.0%
!!! TATATTTTCATTTTTTCTAA+TGG + chr1_1:68421347-68421366 Msa0038920:intron 10.0%
!!! ATTTTATTTTTTTGAAGGAA+AGG + chr1_1:68413393-68413412 Msa0038920:intron 15.0%
!!! CATTAATTGTTAATGATTTT+AGG + chr1_1:68413508-68413527 Msa0038920:intron 15.0%
!!! TTAATTGTTAATGATTTTAG+GGG + chr1_1:68413510-68413529 Msa0038920:intron 15.0%
!! TCAAAGTAGTTAATTATTAA+AGG - chr1_1:68413681-68413700 None:intergenic 15.0%
!!! TAATAGAATAATTTGTTGTT+AGG - chr1_1:68414044-68414063 None:intergenic 15.0%
!! TATTCTATTAAATTGGAATT+TGG + chr1_1:68414054-68414073 Msa0038920:intron 15.0%
!! AAAAAATAAAGTTTAACTAG+AGG + chr1_1:68414194-68414213 Msa0038920:intron 15.0%
!! AAAAATAAAGTTTAACTAGA+GGG + chr1_1:68414195-68414214 Msa0038920:intron 15.0%
!! GATTCTATTAAATTTGAATT+TGG - chr1_1:68414345-68414364 None:intergenic 15.0%
!! ATGAAAAAATAAACTTTATC+CGG - chr1_1:68414393-68414412 None:intergenic 15.0%
!!! GATAAAGTTTATTTTTTCAT+CGG + chr1_1:68414393-68414412 Msa0038920:intron 15.0%
!! TAATCAATACCAAATTATAA+AGG - chr1_1:68414472-68414491 None:intergenic 15.0%
!!! TATAATTTGGTATTGATTAT+TGG + chr1_1:68414473-68414492 Msa0038920:intron 15.0%
!!! ATTATTTTATTCTGTCATTA+TGG - chr1_1:68414641-68414660 None:intergenic 15.0%
!! AGATATATAAATTTATCCTA+AGG - chr1_1:68414675-68414694 None:intergenic 15.0%
!!! TTTTGATTTGAATTACTTAA+AGG - chr1_1:68416594-68416613 None:intergenic 15.0%
!!! TTAAAAATTTAATTTCTGTG+AGG + chr1_1:68416727-68416746 Msa0038920:intron 15.0%
!!! TGATAAGTTAAATATTTTTC+GGG - chr1_1:68418065-68418084 None:intergenic 15.0%
!!! ATTATTTTATTCTGTCATTA+TGG - chr1_1:68414641-68414660 None:intergenic 15.0%
!! AGATATATAAATTTATCCTA+AGG - chr1_1:68414675-68414694 None:intergenic 15.0%
!!! AATACAATTATTCACTTTTT+GGG - chr1_1:68420472-68420491 None:intergenic 15.0%
!!! TAATACAATTATTCACTTTT+TGG - chr1_1:68420473-68420492 None:intergenic 15.0%
!!! GAAAATAACACAAATATTTT+AGG + chr1_1:68420651-68420670 Msa0038920:intron 15.0%
!!! AAATAACACAAATATTTTAG+GGG + chr1_1:68420653-68420672 Msa0038920:intron 15.0%
!! CCATATTAATCTTAATTATT+GGG - chr1_1:68420858-68420877 None:intergenic 15.0%
!! ACATTGAAAAATTTATAGAA+AGG + chr1_1:68421131-68421150 Msa0038920:intron 15.0%
!!! TAAAACGTTCTTTTTTTTAA+TGG + chr1_1:68421393-68421412 Msa0038920:intron 15.0%
!! TAAACAAAAAATGATAACTT+TGG - chr1_1:68422161-68422180 None:intergenic 15.0%
!! GTTTATAATGTGATAAAATA+AGG + chr1_1:68422591-68422610 Msa0038920:intron 15.0%
!!! ATTTTTCTTTTGATGTTTCT+TGG + chr1_1:68413254-68413273 Msa0038920:CDS 20.0%
!!! TTTTAACGAACTTTTACTTA+TGG - chr1_1:68414308-68414327 None:intergenic 20.0%
!! AAAAGTTCGTTAAAAATGTT+TGG + chr1_1:68414313-68414332 Msa0038920:intron 20.0%
!! ACTATGTTGTATATATACTA+TGG + chr1_1:68414780-68414799 Msa0038920:intron 20.0%
!! TCAAATCAAAAAGTTATTGT+TGG + chr1_1:68416603-68416622 Msa0038920:intron 20.0%
!! TATGAATTTATTATTGCGAA+GGG - chr1_1:68416955-68416974 None:intergenic 20.0%
!! ATATGAATTTATTATTGCGA+AGG - chr1_1:68416956-68416975 None:intergenic 20.0%
!! CAAATAACAGAAGAATTAAA+AGG - chr1_1:68416987-68417006 None:intergenic 20.0%
!!! GTAGTTTTAGAATCAAAAAA+TGG - chr1_1:68417044-68417063 None:intergenic 20.0%
!! TCACTATGTAAAATATCAAA+GGG - chr1_1:68417077-68417096 None:intergenic 20.0%
!! ATCACTATGTAAAATATCAA+AGG - chr1_1:68417078-68417097 None:intergenic 20.0%
!!! ATGATTTTACAAATTTCTTG+TGG + chr1_1:68417156-68417175 Msa0038920:intron 20.0%
!!! AAATCTTTTCAATGTGATAA+TGG + chr1_1:68417266-68417285 Msa0038920:intron 20.0%
!!! GATAAGTTAAATATTTTTCG+GGG - chr1_1:68418064-68418083 None:intergenic 20.0%
!!! ATTTTGTGATTTTTAGGTAT+GGG - chr1_1:68418115-68418134 None:intergenic 20.0%
!! AAACATAAGAAAAATTCTGA+TGG + chr1_1:68418262-68418281 Msa0038920:intron 20.0%
!! ACTATGTTGTATATATACTA+TGG + chr1_1:68414780-68414799 Msa0038920:intron 20.0%
!!! CATAGGTTTTTTCATATATT+GGG + chr1_1:68420015-68420034 Msa0038920:CDS 20.0%
!!! ATAGGTTTTTTCATATATTG+GGG + chr1_1:68420016-68420035 Msa0038920:CDS 20.0%
!!! TTTTGTTTATGCATAATTTG+AGG + chr1_1:68420186-68420205 Msa0038920:intron 20.0%
!! ATGTGAAAATTTGAAAATGA+TGG - chr1_1:68420382-68420401 None:intergenic 20.0%
!! AATGTAAAAATCTCTAAACA+AGG + chr1_1:68420558-68420577 Msa0038920:intron 20.0%
!! CCCAATAATTAAGATTAATA+TGG + chr1_1:68420855-68420874 Msa0038920:intron 20.0%
!! GCCATATTAATCTTAATTAT+TGG - chr1_1:68420859-68420878 None:intergenic 20.0%
!!! TTTTCTCAAAAATTTGAAGT+TGG + chr1_1:68421057-68421076 Msa0038920:intron 20.0%
!! TAGAAGCTCTTAAAATAAAA+AGG + chr1_1:68421096-68421115 Msa0038920:intron 20.0%
!!! TCGTTTTCTTTGTTTTTTTT+TGG + chr1_1:68421295-68421314 Msa0038920:intron 20.0%
!!! TTTTCTTTGTTTTTTTTTGG+TGG + chr1_1:68421298-68421317 Msa0038920:intron 20.0%
!!! AAATTTTGTATTGTCTTACT+AGG - chr1_1:68421974-68421993 None:intergenic 20.0%
!! TAGTGTTACAATTAAAAATG+TGG + chr1_1:68422309-68422328 Msa0038920:CDS 20.0%
!! AGTGTTACAATTAAAAATGT+GGG + chr1_1:68422310-68422329 Msa0038920:CDS 20.0%
!! TCATATACTATGTATATGAA+GGG + chr1_1:68422454-68422473 Msa0038920:intron 20.0%
!!! TTTTGAAAATACAAACAAGT+AGG - chr1_1:68422955-68422974 None:intergenic 20.0%
!!! TTGTTTTAAACCATATAGTT+TGG - chr1_1:68423117-68423136 None:intergenic 20.0%
!!! TTTTATTGTTGTGTGTAAAT+TGG + chr1_1:68423591-68423610 Msa0038920:intron 20.0%
!! TTTATTGTTGTGTGTAAATT+GGG + chr1_1:68423592-68423611 Msa0038920:intron 20.0%
!! ACATTACCTAATTATAACAT+AGG - chr1_1:68423928-68423947 None:intergenic 20.0%
!!! AATTATTAAGTGCAACTTTT+GGG - chr1_1:68424030-68424049 None:intergenic 20.0%
!!! AAATTATTAAGTGCAACTTT+TGG - chr1_1:68424031-68424050 None:intergenic 20.0%
!! TGATTGTTAATCAAATCAAA+CGG - chr1_1:68424117-68424136 None:intergenic 20.0%
! TCAAAAGAAAAATGATCCTT+AGG - chr1_1:68413247-68413266 None:intergenic 25.0%
!!! ATTTTTTTGAAGGAAAGGTT+AGG + chr1_1:68413398-68413417 Msa0038920:intron 25.0%
!! TAATTATTAAAGGCTAGCTA+GGG - chr1_1:68413671-68413690 None:intergenic 25.0%
!! TTAATTATTAAAGGCTAGCT+AGG - chr1_1:68413672-68413691 None:intergenic 25.0%
!!! ATATGTTTTTGTTTCAGTAC+TGG + chr1_1:68413726-68413745 Msa0038920:intron 25.0%
!!! TATGTTTTTGTTTCAGTACT+GGG + chr1_1:68413727-68413746 Msa0038920:intron 25.0%
! AAGTGTTCATTAAGAATGTT+TGG - chr1_1:68414086-68414105 None:intergenic 25.0%
!! ACTAAAGTACTCTAATCATT+CGG - chr1_1:68414282-68414301 None:intergenic 25.0%
!!! ACTTTATTTTTTCATTCGGT+CGG - chr1_1:68414186-68414205 None:intergenic 25.0%
!! TAGAGGGTTAATCTAAAATT+CGG + chr1_1:68414211-68414230 Msa0038920:intron 25.0%
! CAAACTTTATTATAACTCTC+CGG + chr1_1:68414371-68414390 Msa0038920:intron 25.0%
!!! AAAGTTTATTTTTTCATCGG+AGG + chr1_1:68414396-68414415 Msa0038920:intron 25.0%
!!! AAGTTTATTTTTTCATCGGA+GGG + chr1_1:68414397-68414416 Msa0038920:intron 25.0%
! TTACATAGGAAACATATGTT+GGG + chr1_1:68414544-68414563 Msa0038920:CDS 25.0%
! TAAATTTATCCTAAGGCTAA+TGG - chr1_1:68414668-68414687 None:intergenic 25.0%
! TCTCAAGAATAATAGGAATA+TGG - chr1_1:68415528-68415547 None:intergenic 25.0%
! TATTCCTATTATTCTTGAGA+TGG + chr1_1:68415528-68415547 Msa0038920:intron 25.0%
!! TTTTCCATCTCAAGAATAAT+AGG - chr1_1:68415535-68415554 None:intergenic 25.0%
! AAAAAGATCAATATGGAACT+TGG + chr1_1:68415551-68415570 Msa0038920:intron 25.0%
! AAAAGATCAATATGGAACTT+GGG + chr1_1:68415552-68415571 Msa0038920:intron 25.0%
!! TCGTTTAACAGATATTTTTC+AGG + chr1_1:68415786-68415805 Msa0038920:intron 25.0%
!! ATATTTTACATAGTGATGTG+TGG + chr1_1:68417081-68417100 Msa0038920:intron 25.0%
! CAACAATATTGTACTAATCA+TGG + chr1_1:68417314-68417333 Msa0038920:intron 25.0%
!!! TGATTTTGAAGTGTTTTACA+AGG - chr1_1:68417509-68417528 None:intergenic 25.0%
! ACAGAAAGTTAATAATTTCG+AGG + chr1_1:68417711-68417730 Msa0038920:intron 25.0%
!!! CATTTTGTGATTTTTAGGTA+TGG - chr1_1:68418116-68418135 None:intergenic 25.0%
! CATACCTAAAAATCACAAAA+TGG + chr1_1:68418114-68418133 Msa0038920:intron 25.0%
! ACTTATTAGAAATAAGACGT+GGG + chr1_1:68418186-68418205 Msa0038920:intron 25.0%
! ATTATCACAATATACCAAAG+TGG - chr1_1:68419406-68419425 None:intergenic 25.0%
!!! GTGTTCTTTTTGATGATTTT+CGG + chr1_1:68419592-68419611 Msa0038920:intron 25.0%
! TAAATTTATCCTAAGGCTAA+TGG - chr1_1:68414668-68414687 None:intergenic 25.0%
! CCAATATATGAAAAAACCTA+TGG - chr1_1:68420017-68420036 None:intergenic 25.0%
!!! CCATAGGTTTTTTCATATAT+TGG + chr1_1:68420014-68420033 Msa0038920:CDS 25.0%
! ATGTGCATTTACAAAGAAAA+CGG + chr1_1:68420711-68420730 Msa0038920:intron 25.0%
! AAGAAAACGGGATTAATTAA+TGG + chr1_1:68420724-68420743 Msa0038920:intron 25.0%
!!! CACTAGTTCATAGTTTTTTT+TGG + chr1_1:68420749-68420768 Msa0038920:intron 25.0%
! TCACTAGTTCATAGTTTAAA+GGG + chr1_1:68420776-68420795 Msa0038920:intron 25.0%
!! GAATTCTTCGAAGATTATTT+TGG - chr1_1:68420821-68420840 None:intergenic 25.0%
! AAAATTATGTGAGACTTTGT+TGG - chr1_1:68420978-68420997 None:intergenic 25.0%
! GAGCTTAGAAAAAATTGAAA+AGG + chr1_1:68421153-68421172 Msa0038920:intron 25.0%
! TAGATATATACATGCATGAT+TGG - chr1_1:68421607-68421626 None:intergenic 25.0%
!!! TACAAATATTTTGATTTCCC+AGG + chr1_1:68421625-68421644 Msa0038920:intron 25.0%
! TATAGTATAAACCTGAAGTT+AGG - chr1_1:68422189-68422208 None:intergenic 25.0%
!!! CACAATTTCTAAGGTAAATT+TGG + chr1_1:68422425-68422444 Msa0038920:intron 25.0%
! CTCATATACTATGTATATGA+AGG + chr1_1:68422453-68422472 Msa0038920:intron 25.0%
! ATAAGGATAAATTACTGTTG+CGG + chr1_1:68422608-68422627 Msa0038920:intron 25.0%
!! GGATTGCAATTTAAAACTAT+TGG + chr1_1:68422629-68422648 Msa0038920:intron 25.0%
! GTCACATTGTTCATAAATTT+AGG + chr1_1:68422705-68422724 Msa0038920:intron 25.0%
! AGAAACAAATCCAAACTATA+TGG + chr1_1:68423104-68423123 Msa0038920:CDS 25.0%
! TATCCAATTGAAAATAACAC+AGG + chr1_1:68423262-68423281 Msa0038920:CDS 25.0%
! GATTCTCCTATGTTATAATT+AGG + chr1_1:68423919-68423938 Msa0038920:three_prime_UTR 25.0%
! AATATACATGCAAAACATAG+AGG - chr1_1:68423996-68424015 None:intergenic 25.0%
! TTCTTTTGATGTTTCTTGGA+TGG + chr1_1:68413258-68413277 Msa0038920:CDS 30.0%
!!! TTATTTTTTCCCGATGAAGA+TGG - chr1_1:68413597-68413616 None:intergenic 30.0%
!! ATGTTTTTGTTTCAGTACTG+GGG + chr1_1:68413728-68413747 Msa0038920:intron 30.0%
AATTGGAATTGTTTCAGCTA+TGG + chr1_1:68413803-68413822 Msa0038920:CDS 30.0%
!! TGTTTGTTGCACTTTTGATA+TGG + chr1_1:68413844-68413863 Msa0038920:CDS 30.0%
!! TGATTATTGGTCTTTGTAGA+TGG + chr1_1:68414486-68414505 Msa0038920:intron 30.0%
!! GATTATTGGTCTTTGTAGAT+GGG + chr1_1:68414487-68414506 Msa0038920:intron 30.0%
!!! TTTTTGAGACTAGGTTACAT+AGG + chr1_1:68414530-68414549 Msa0038920:CDS 30.0%
GTTACATAGGAAACATATGT+TGG + chr1_1:68414543-68414562 Msa0038920:CDS 30.0%
AGAACATTACAGTTCTTTCA+TGG + chr1_1:68414826-68414845 Msa0038920:intron 30.0%
CAAATCACGAACAGAAAATA+CGG - chr1_1:68415353-68415372 None:intergenic 30.0%
AGGAATATGGTTCCTAATAT+TGG - chr1_1:68415515-68415534 None:intergenic 30.0%
GAGATGGAAAAAGATCAATA+TGG + chr1_1:68415544-68415563 Msa0038920:intron 30.0%
ATATCAGTTGAAGAACTAGA+CGG - chr1_1:68415957-68415976 None:intergenic 30.0%
CAAAAAGTTATTGTTGGCAA+CGG + chr1_1:68416609-68416628 Msa0038920:intron 30.0%
CAGATACAGTAAAACCAAAA+GGG - chr1_1:68416791-68416810 None:intergenic 30.0%
TCAGATACAGTAAAACCAAA+AGG - chr1_1:68416792-68416811 None:intergenic 30.0%
! TACTGTATCTGATTTTCAGA+CGG + chr1_1:68416800-68416819 Msa0038920:intron 30.0%
! ATTTGTGACTCTTGTGTTTT+AGG + chr1_1:68417002-68417021 Msa0038920:intron 30.0%
GCAAAAATTGGGTTTGAATA+AGG - chr1_1:68417238-68417257 None:intergenic 30.0%
!!! TCTTTTCAATGTGATAATGG+TGG + chr1_1:68417269-68417288 Msa0038920:intron 30.0%
AGGAAGAATGTTTAACAGAT+AGG - chr1_1:68417489-68417508 None:intergenic 30.0%
!!! GTTAAATATTTTTCGGGGTT+TGG - chr1_1:68418059-68418078 None:intergenic 30.0%
ATCAAATTCAGATTGCATTG+CGG - chr1_1:68418164-68418183 None:intergenic 30.0%
CACTTATTAGAAATAAGACG+TGG + chr1_1:68418185-68418204 Msa0038920:intron 30.0%
AAATCCACATACATCGAATA+AGG - chr1_1:68418240-68418259 None:intergenic 30.0%
AAGAGATAAGTTTCTCGATA+GGG - chr1_1:68419164-68419183 None:intergenic 30.0%
TAAGAGATAAGTTTCTCGAT+AGG - chr1_1:68419165-68419184 None:intergenic 30.0%
AAATCATCAAAAAGAACACG+CGG - chr1_1:68419591-68419610 None:intergenic 30.0%
AACATTACAGTTCTTTCAAG+AGG + chr1_1:68419893-68419912 Msa0038920:intron 30.0%
CAAGCATCAAATATCATATC+TGG + chr1_1:68419954-68419973 Msa0038920:CDS 30.0%
ATCAAATATCATATCTGGCT+TGG + chr1_1:68419959-68419978 Msa0038920:CDS 30.0%
! TCAAATATCATATCTGGCTT+GGG + chr1_1:68419960-68419979 Msa0038920:CDS 30.0%
! TCTTTTTCCTCGATCTATTT+GGG - chr1_1:68420132-68420151 None:intergenic 30.0%
! TTCTTTTTCCTCGATCTATT+TGG - chr1_1:68420133-68420152 None:intergenic 30.0%
TCTCATTCATATAGCCATAT+AGG + chr1_1:68420161-68420180 Msa0038920:intron 30.0%
GCATAAACAAAAGACCTATA+TGG - chr1_1:68420178-68420197 None:intergenic 30.0%
! CATAATTTGAGGTCCTATAA+TGG + chr1_1:68420197-68420216 Msa0038920:intron 30.0%
ATATATACTGTCCCTTCATT+TGG + chr1_1:68420259-68420278 Msa0038920:intron 30.0%
TATATACTGTCCCTTCATTT+GGG + chr1_1:68420260-68420279 Msa0038920:intron 30.0%
GGAGAGAAGATAAAATTCTA+GGG - chr1_1:68420584-68420603 None:intergenic 30.0%
TGGAGAGAAGATAAAATTCT+AGG - chr1_1:68420585-68420604 None:intergenic 30.0%
TTTATCTTCTCTCCATCAAA+AGG + chr1_1:68420590-68420609 Msa0038920:intron 30.0%
TGTGCATTTACAAAGAAAAC+GGG + chr1_1:68420712-68420731 Msa0038920:intron 30.0%
CTCACTAGTTCATAGTTTAA+AGG + chr1_1:68420775-68420794 Msa0038920:intron 30.0%
AGTTCATAGTTTAAAGGGAT+TGG + chr1_1:68420781-68420800 Msa0038920:intron 30.0%
TTCGAAGAATTCATTCATGT+TGG + chr1_1:68420829-68420848 Msa0038920:intron 30.0%
TCGAAGAATTCATTCATGTT+GGG + chr1_1:68420830-68420849 Msa0038920:intron 30.0%
! TAGTTTGTAACTATGCTCTT+TGG - chr1_1:68420898-68420917 None:intergenic 30.0%
TATCATATGAGTTGTACTTC+CGG + chr1_1:68420997-68421016 Msa0038920:intron 30.0%
GAAAATATATGTAAGGTCCA+GGG - chr1_1:68421336-68421355 None:intergenic 30.0%
TGAAAATATATGTAAGGTCC+AGG - chr1_1:68421337-68421356 None:intergenic 30.0%
ATTTGATCGTGATATGTTGA+TGG + chr1_1:68421527-68421546 Msa0038920:intron 30.0%
AGATATAGAGAATGTAGAGA+TGG - chr1_1:68421781-68421800 None:intergenic 30.0%
TATGCTTCAATACAATGTGT+TGG - chr1_1:68422032-68422051 None:intergenic 30.0%
!! TGTTTACTTTTCCTAACTTC+AGG + chr1_1:68422175-68422194 Msa0038920:intron 30.0%
TTTATGAACACCAAACTTGT+GGG - chr1_1:68422214-68422233 None:intergenic 30.0%
ATTTATGAACACCAAACTTG+TGG - chr1_1:68422215-68422234 None:intergenic 30.0%
AGAACTTTCTTCTTCATCTT+TGG + chr1_1:68422357-68422376 Msa0038920:CDS 30.0%
TTTGGATCATCTTAATGTCT+CGG + chr1_1:68422375-68422394 Msa0038920:CDS 30.0%
GATTTCACAGATATGACTAT+GGG - chr1_1:68422523-68422542 None:intergenic 30.0%
AGATTTCACAGATATGACTA+TGG - chr1_1:68422524-68422543 None:intergenic 30.0%
ATAGTCATATCTGTGAAATC+TGG + chr1_1:68422523-68422542 Msa0038920:intron 30.0%
! CAATTTAAAACTATTGGAGC+AGG + chr1_1:68422635-68422654 Msa0038920:intron 30.0%
AGTAGTGAAAAGTAAAACCT+AGG + chr1_1:68422661-68422680 Msa0038920:intron 30.0%
CTCCATCTTTCTTTAGATTT+CGG + chr1_1:68422750-68422769 Msa0038920:intron 30.0%
AACCGAAATCTAAAGAAAGA+TGG - chr1_1:68422755-68422774 None:intergenic 30.0%
!! CATCATTCTATCTCTAAAAC+AGG + chr1_1:68422819-68422838 Msa0038920:intron 30.0%
! TCACGGATTATAGATATGAA+TGG - chr1_1:68422887-68422906 None:intergenic 30.0%
! ATACAAACAAGTAGGAGTTT+TGG - chr1_1:68422947-68422966 None:intergenic 30.0%
! ATGTAAGCTTCGATTTGTAA+CGG - chr1_1:68423049-68423068 None:intergenic 30.0%
AACGAGTAACAATTCCTAAA+AGG - chr1_1:68423234-68423253 None:intergenic 30.0%
!!! TCACCTGTGTTATTTTCAAT+TGG - chr1_1:68423268-68423287 None:intergenic 30.0%
AAACATGTACCACATAACTT+TGG - chr1_1:68423308-68423327 None:intergenic 30.0%
TACCATGTCTATTGTATCAA+TGG + chr1_1:68423651-68423670 Msa0038920:intron 30.0%
ACCATGTCTATTGTATCAAT+GGG + chr1_1:68423652-68423671 Msa0038920:intron 30.0%
GAAATTCTGTTTGAGTGTAA+AGG + chr1_1:68423706-68423725 Msa0038920:intron 30.0%
!! TTGAGTCCATCAGTTTTAAT+TGG + chr1_1:68423821-68423840 Msa0038920:CDS 30.0%
!! TACATTTTAGAGATGGTAGA+AGG - chr1_1:68423893-68423912 None:intergenic 30.0%
!! CAACATGTACATTTTAGAGA+TGG - chr1_1:68423900-68423919 None:intergenic 30.0%
AAATGATCCTTAGGAATGTG+TGG - chr1_1:68413238-68413257 None:intergenic 35.0%
!! GTGTTTTTGTAGACCTTTGT+GGG - chr1_1:68413305-68413324 None:intergenic 35.0%
!! TGTGTTTTTGTAGACCTTTG+TGG - chr1_1:68413306-68413325 None:intergenic 35.0%
CAAAGGTCTACAAAAACACA+TGG + chr1_1:68413306-68413325 Msa0038920:CDS 35.0%
!! TTGAGCTTGATTTCTAGCTT+GGG - chr1_1:68413335-68413354 None:intergenic 35.0%
!! ATTGAGCTTGATTTCTAGCT+TGG - chr1_1:68413336-68413355 None:intergenic 35.0%
ACATTCCCTATGATGTTCAT+TGG + chr1_1:68413550-68413569 Msa0038920:CDS 35.0%
GTGTTTATCTCCATCTTCAT+CGG + chr1_1:68413584-68413603 Msa0038920:CDS 35.0%
TGTTTATCTCCATCTTCATC+GGG + chr1_1:68413585-68413604 Msa0038920:CDS 35.0%
TTAGAAACGAATCAACCTTG+TGG - chr1_1:68413635-68413654 None:intergenic 35.0%
GCTGAAACAATTCCAATTGT+AGG - chr1_1:68413801-68413820 None:intergenic 35.0%
! GAACTCCAGACTCTAAAAAT+CGG - chr1_1:68413995-68414014 None:intergenic 35.0%
!!! TATTTTTTCATTCGGTCGGA+AGG - chr1_1:68414182-68414201 None:intergenic 35.0%
! GGGTTAATCTAAAATTCGGT+CGG + chr1_1:68414215-68414234 Msa0038920:intron 35.0%
! TAATCTAAAATTCGGTCGGA+AGG + chr1_1:68414219-68414238 Msa0038920:intron 35.0%
!!! AGGAGTGTATTTTTGAGACT+AGG + chr1_1:68414521-68414540 Msa0038920:CDS 35.0%
TTGTTCTTTCCAGTAACAAG+AGG + chr1_1:68414572-68414591 Msa0038920:CDS 35.0%
ATTCTATCACCTCTTGTTAC+TGG - chr1_1:68414584-68414603 None:intergenic 35.0%
! ATTATGGTTGTTGTTGGTAG+TGG - chr1_1:68414625-68414644 None:intergenic 35.0%
TCTGTCATTATGGTTGTTGT+TGG - chr1_1:68414631-68414650 None:intergenic 35.0%
!! ATAATCTAGCCATTAGCCTT+AGG + chr1_1:68414656-68414675 Msa0038920:intron 35.0%
ATCATGACTAGCATGATTCA+AGG + chr1_1:68414743-68414762 Msa0038920:intron 35.0%
! CGTATTTTCTGTTCGTGATT+TGG + chr1_1:68415351-68415370 Msa0038920:intron 35.0%
ATGGTTCCTAATATTGGAGA+CGG - chr1_1:68415509-68415528 None:intergenic 35.0%
ATAAATCCACTGAAGAACAG+TGG - chr1_1:68415698-68415717 None:intergenic 35.0%
! CTAGTTCTTCAACTGATATC+TGG + chr1_1:68415958-68415977 Msa0038920:intron 35.0%
CATGGTTTAAGTGAATAGGT+TGG - chr1_1:68416686-68416705 None:intergenic 35.0%
AGGACATGGTTTAAGTGAAT+AGG - chr1_1:68416690-68416709 None:intergenic 35.0%
AATAGAGACATTGTTGTCAG+TGG - chr1_1:68416760-68416779 None:intergenic 35.0%
! TCTATTACCTTTGACCCTTT+TGG + chr1_1:68416774-68416793 Msa0038920:intron 35.0%
AGTAAAACCAAAAGGGTCAA+AGG - chr1_1:68416784-68416803 None:intergenic 35.0%
! ACTGTATCTGATTTTCAGAC+GGG + chr1_1:68416801-68416820 Msa0038920:intron 35.0%
! GAATTTAAAACAGATACGCC+AGG - chr1_1:68416933-68416952 None:intergenic 35.0%
!!! TCTCCAATTTTAAGTTCTGC+TGG + chr1_1:68417107-68417126 Msa0038920:intron 35.0%
TGACCAGCAGAACTTAAAAT+TGG - chr1_1:68417113-68417132 None:intergenic 35.0%
! AGATTTTCTGCTCATAGGAA+AGG - chr1_1:68417183-68417202 None:intergenic 35.0%
! ACTTGAGATTTTCTGCTCAT+AGG - chr1_1:68417188-68417207 None:intergenic 35.0%
AGTGCGTATCATATTGTTGA+TGG - chr1_1:68417408-68417427 None:intergenic 35.0%
! TACACACACTTACGAGTTTT+TGG + chr1_1:68417566-68417585 Msa0038920:intron 35.0%
AACTTATGAATGGTAGGTGA+CGG - chr1_1:68417614-68417633 None:intergenic 35.0%
GGTTGTAACTTATGAATGGT+AGG - chr1_1:68417620-68417639 None:intergenic 35.0%
CAAAACACTTGTAACCTCTA+TGG - chr1_1:68417682-68417701 None:intergenic 35.0%
AAGTTATAAGAGTGAGGTGA+AGG - chr1_1:68417785-68417804 None:intergenic 35.0%
TCTAGGAAGTTATAAGAGTG+AGG - chr1_1:68417791-68417810 None:intergenic 35.0%
!! GATTTTGCCATTTATGCACT+AGG - chr1_1:68417832-68417851 None:intergenic 35.0%
GCAAAATCAAATATCACCAC+CGG + chr1_1:68417844-68417863 Msa0038920:intron 35.0%
!! TGAGGATTGTTGGTTTATTG+AGG - chr1_1:68417918-68417937 None:intergenic 35.0%
TAGAAATAAGACGTGGGATT+TGG + chr1_1:68418192-68418211 Msa0038920:intron 35.0%
CTAACCTTATTCGATGTATG+TGG + chr1_1:68418233-68418252 Msa0038920:intron 35.0%
TGAACATCTAGCTGATGAAT+AGG - chr1_1:68418430-68418449 None:intergenic 35.0%
GTTCAGAATGCATTTCTACA+TGG + chr1_1:68418445-68418464 Msa0038920:intron 35.0%
! CATAAAGTGATTTTCGCAAG+CGG - chr1_1:68418543-68418562 None:intergenic 35.0%
ATCACTCACTCTTCATATAC+CGG + chr1_1:68418644-68418663 Msa0038920:intron 35.0%
!! GATGGATTTTCGAAGATCAT+GGG - chr1_1:68418731-68418750 None:intergenic 35.0%
!!! TGATGGATTTTCGAAGATCA+TGG - chr1_1:68418732-68418751 None:intergenic 35.0%
TGATCTTCGAAAATCCATCA+TGG + chr1_1:68418732-68418751 Msa0038920:intron 35.0%
TCATGGCAAATTCAGATGTA+AGG - chr1_1:68418762-68418781 None:intergenic 35.0%
TACATCTGAATTTGCCATGA+AGG + chr1_1:68418762-68418781 Msa0038920:intron 35.0%
TGAATTTGCCATGAAGGATT+TGG + chr1_1:68418768-68418787 Msa0038920:intron 35.0%
GAATTTGCCATGAAGGATTT+GGG + chr1_1:68418769-68418788 Msa0038920:intron 35.0%
ATACCCAAGAAGTAACTTAG+TGG - chr1_1:68418796-68418815 None:intergenic 35.0%
TATCACTAGCATAAGTACTC+TGG - chr1_1:68418855-68418874 None:intergenic 35.0%
GGTGAAAGTAAGATATTGCA+AGG - chr1_1:68419004-68419023 None:intergenic 35.0%
TTTGAGGGAAAACATATGGT+CGG - chr1_1:68419085-68419104 None:intergenic 35.0%
AGAGATAAGTTTCTCGATAG+GGG - chr1_1:68419163-68419182 None:intergenic 35.0%
TCTCTTATACTGATGCTGAT+TGG + chr1_1:68419178-68419197 Msa0038920:intron 35.0%
! CTCTTATACTGATGCTGATT+GGG + chr1_1:68419179-68419198 Msa0038920:intron 35.0%
! TCTTATACTGATGCTGATTG+GGG + chr1_1:68419180-68419199 Msa0038920:intron 35.0%
ATGTGGTATCTGAATCTTGT+TGG + chr1_1:68419337-68419356 Msa0038920:intron 35.0%
TGGATTACCAGAAAGGTAAA+TGG - chr1_1:68419436-68419455 None:intergenic 35.0%
CATTCACTTTGTTCGAGAAA+AGG + chr1_1:68419491-68419510 Msa0038920:intron 35.0%
! ATTATGGTTGTTGTTGGTAG+TGG - chr1_1:68414625-68414644 None:intergenic 35.0%
TCTGTCATTATGGTTGTTGT+TGG - chr1_1:68414631-68414650 None:intergenic 35.0%
!! ATAATCTAGCCATTAGCCTT+AGG + chr1_1:68414656-68414675 Msa0038920:intron 35.0%
ATCATGACTAGCATGATTCA+AGG + chr1_1:68414743-68414762 Msa0038920:intron 35.0%
ACATACCTCAACCATTTGAT+TGG - chr1_1:68420047-68420066 None:intergenic 35.0%
AAATTACCCCAAATAGATCG+AGG + chr1_1:68420122-68420141 Msa0038920:intron 35.0%
! CTTTTTCCTCGATCTATTTG+GGG - chr1_1:68420131-68420150 None:intergenic 35.0%
ATCAATGTTGCCCAAATGAA+GGG - chr1_1:68420273-68420292 None:intergenic 35.0%
GGCCATAAAATCTCTTACTA+CGG + chr1_1:68420446-68420465 Msa0038920:intron 35.0%
! TGTAAAACGAGTCCTTTTGA+TGG - chr1_1:68420605-68420624 None:intergenic 35.0%
CGAAGAATTCATTCATGTTG+GGG + chr1_1:68420831-68420850 Msa0038920:intron 35.0%
ACAAACTAACACACACTAAG+TGG + chr1_1:68420910-68420929 Msa0038920:intron 35.0%
ATCATATGAGTTGTACTTCC+GGG + chr1_1:68420998-68421017 Msa0038920:intron 35.0%
TCTAATGATCTAGCATTTCG+TGG - chr1_1:68421461-68421480 None:intergenic 35.0%
AGATATGTATCCAATGTAGC+TGG + chr1_1:68421665-68421684 Msa0038920:CDS 35.0%
GTTTAATAGCATTAGCCATG+TGG + chr1_1:68421699-68421718 Msa0038920:CDS 35.0%
TAACAAGCATTCCACGAATA+AGG + chr1_1:68421723-68421742 Msa0038920:CDS 35.0%
TTATTCTATGCCATCCATGT+TGG + chr1_1:68421800-68421819 Msa0038920:CDS 35.0%
ACATGTATTCAACTCCAACA+TGG - chr1_1:68421817-68421836 None:intergenic 35.0%
! ATCTAAGGTGTCTATCAATG+AGG - chr1_1:68421868-68421887 None:intergenic 35.0%
TATTGTCTTACTAGGATCCT+TGG - chr1_1:68421966-68421985 None:intergenic 35.0%
TGAAGCATATGTCTAGTATC+CGG + chr1_1:68422043-68422062 Msa0038920:intron 35.0%
ATACTATAACCCCACAAGTT+TGG + chr1_1:68422201-68422220 Msa0038920:CDS 35.0%
TTATGAACACCAAACTTGTG+GGG - chr1_1:68422213-68422232 None:intergenic 35.0%
GGTGTTCATAAATGTTCCAA+AGG + chr1_1:68422222-68422241 Msa0038920:CDS 35.0%
AACTAGAAGACACCGTAAAA+GGG - chr1_1:68422267-68422286 None:intergenic 35.0%
! GGTGTCTTCTAGTTGTAATT+TGG + chr1_1:68422273-68422292 Msa0038920:CDS 35.0%
CAATTAAAAATGTGGGAAGC+TGG + chr1_1:68422317-68422336 Msa0038920:CDS 35.0%
CTTAGAAATTGTGCAGAATG+TGG - chr1_1:68422418-68422437 None:intergenic 35.0%
CACATTCTGCACAATTTCTA+AGG + chr1_1:68422416-68422435 Msa0038920:CDS 35.0%
ATCATGTTCCTTTGAGTACA+TGG + chr1_1:68422497-68422516 Msa0038920:intron 35.0%
! TTTAAAACTATTGGAGCAGG+CGG + chr1_1:68422638-68422657 Msa0038920:intron 35.0%
AACAATGTGACTACATTCCT+AGG - chr1_1:68422696-68422715 None:intergenic 35.0%
!! GGCTTTGAAATATGAGATCA+CGG - chr1_1:68422904-68422923 None:intergenic 35.0%
! GAGGTTGAAATTCTTGTTGT+TGG - chr1_1:68422925-68422944 None:intergenic 35.0%
GCATAAGATCTAACATGGTT+AGG - chr1_1:68422988-68423007 None:intergenic 35.0%
! AGGAAGCATAAGATCTAACA+TGG - chr1_1:68422993-68423012 None:intergenic 35.0%
! TGTTTCTGAGTATCTCTTGA+AGG - chr1_1:68423091-68423110 None:intergenic 35.0%
CAAGCCATAACCAGTTATTT+GGG - chr1_1:68423174-68423193 None:intergenic 35.0%
! ATCATGTTTCTCCTCCTTTT+AGG + chr1_1:68423217-68423236 Msa0038920:CDS 35.0%
GAGTAACAATTCCTAAAAGG+AGG - chr1_1:68423231-68423250 None:intergenic 35.0%
GTTCTAGCGTTGTATTTCTT+TGG + chr1_1:68423353-68423372 Msa0038920:CDS 35.0%
! CAAGCTACCAATGTACATTT+TGG + chr1_1:68423508-68423527 Msa0038920:CDS 35.0%
TCCCATTGATACAATAGACA+TGG - chr1_1:68423656-68423675 None:intergenic 35.0%
! ACTTCGTGTCTCAATTTTCT+TGG - chr1_1:68423760-68423779 None:intergenic 35.0%
! TAGAATTTGTGCTTCTGGTT+TGG + chr1_1:68423783-68423802 Msa0038920:CDS 35.0%
AGGTCACCAATTAAAACTGA+TGG - chr1_1:68423830-68423849 None:intergenic 35.0%
GTACAGTGATGCAACATTAT+AGG - chr1_1:68423850-68423869 None:intergenic 35.0%
TTCTTGGATGGCTAACAGTT+TGG + chr1_1:68413270-68413289 Msa0038920:CDS 40.0%
TCTACATACTTCAGAGAGCA+AGG + chr1_1:68413356-68413375 Msa0038920:CDS 40.0%
ATACTTCAGAGAGCAAGGTT+AGG + chr1_1:68413361-68413380 Msa0038920:intron 40.0%
TCATAGGGAATGTGAAAAGC+AGG - chr1_1:68413543-68413562 None:intergenic 40.0%
GAGCTCCAATGAACATCATA+GGG - chr1_1:68413558-68413577 None:intergenic 40.0%
AGAGCTCCAATGAACATCAT+AGG - chr1_1:68413559-68413578 None:intergenic 40.0%
ATGATGTTCATTGGAGCTCT+AGG + chr1_1:68413559-68413578 Msa0038920:CDS 40.0%
CACAAAAGTTACCTTCCACA+AGG + chr1_1:68413617-68413636 Msa0038920:CDS 40.0%
AAACGAATCAACCTTGTGGA+AGG - chr1_1:68413631-68413650 None:intergenic 40.0%
! TCCAGACTCTAAAAATCGGA+GGG - chr1_1:68413991-68414010 None:intergenic 40.0%
CAATTGTAGCACTAGCATAG+TGG + chr1_1:68414697-68414716 Msa0038920:intron 40.0%
AATGAGAGGGATCGAAGATT+AGG - chr1_1:68414859-68414878 None:intergenic 40.0%
ACAGAAAATACGGCGAAGTA+CGG - chr1_1:68415343-68415362 None:intergenic 40.0%
ATCAGACATGGTTGTGCAAT+GGG - chr1_1:68415383-68415402 None:intergenic 40.0%
AATCAGACATGGTTGTGCAA+TGG - chr1_1:68415384-68415403 None:intergenic 40.0%
CAGCAAATCAGTAGAAATGG+TGG - chr1_1:68415722-68415741 None:intergenic 40.0%
GGTCAGCAAATCAGTAGAAA+TGG - chr1_1:68415725-68415744 None:intergenic 40.0%
!! TGATTTGCTGACCACTATTC+TGG + chr1_1:68415732-68415751 Msa0038920:intron 40.0%
TAAACGATTCCATGCTTCCA+CGG - chr1_1:68415773-68415792 None:intergenic 40.0%
CATCTTAAGACGTTGACAGT+AGG - chr1_1:68415890-68415909 None:intergenic 40.0%
TCTGACCAGTTGAGAAATGT+CGG + chr1_1:68415913-68415932 Msa0038920:intron 40.0%
! ATGCTCACTTTAGAAGAAGC+CGG + chr1_1:68416060-68416079 Msa0038920:intron 40.0%
AATCAGTGGTACATGGATAC+TGG + chr1_1:68416519-68416538 Msa0038920:intron 40.0%
!! TAAGTGAATAGGTTGGTGAG+AGG - chr1_1:68416679-68416698 None:intergenic 40.0%
!! TAATAATTTTCGGGGCATGC+AGG - chr1_1:68416710-68416729 None:intergenic 40.0%
! CTGTATCTGATTTTCAGACG+GGG + chr1_1:68416802-68416821 Msa0038920:intron 40.0%
TGACTGGATATAGATCACCA+CGG - chr1_1:68416851-68416870 None:intergenic 40.0%
!! CTCTTGTGTTTTAGGCAAAC+AGG + chr1_1:68417010-68417029 Msa0038920:intron 40.0%
GGCAAGAGAAACGAAAAACA+AGG - chr1_1:68417340-68417359 None:intergenic 40.0%
! CATTTTGTGAGGATGTGTGA+GGG - chr1_1:68417361-68417380 None:intergenic 40.0%
CTCACACATCCTCACAAAAT+GGG + chr1_1:68417360-68417379 Msa0038920:intron 40.0%
! TTCTGCTTTCCCATTTTGTG+AGG - chr1_1:68417372-68417391 None:intergenic 40.0%
ACTCGTAAGTGTGTGTAAGT+GGG - chr1_1:68417563-68417582 None:intergenic 40.0%
AACTCGTAAGTGTGTGTAAG+TGG - chr1_1:68417564-68417583 None:intergenic 40.0%
ACTTATGAATGGTAGGTGAC+GGG - chr1_1:68417613-68417632 None:intergenic 40.0%
GCGAGGTTGTAACTTATGAA+TGG - chr1_1:68417624-68417643 None:intergenic 40.0%
TTGTAACCTCTATGGTTCAG+TGG - chr1_1:68417674-68417693 None:intergenic 40.0%
ACCCTTACCTAGTGCATAAA+TGG + chr1_1:68417822-68417841 Msa0038920:intron 40.0%
GCCATTTATGCACTAGGTAA+GGG - chr1_1:68417826-68417845 None:intergenic 40.0%
! TGCCATTTATGCACTAGGTA+AGG - chr1_1:68417827-68417846 None:intergenic 40.0%
!! TGTTGGTTTATTGAGGAGAG+TGG - chr1_1:68417911-68417930 None:intergenic 40.0%
GAGGTAGAGGAAATTGTAGT+GGG - chr1_1:68417965-68417984 None:intergenic 40.0%
TGAGGTAGAGGAAATTGTAG+TGG - chr1_1:68417966-68417985 None:intergenic 40.0%
! TGGTAATGCCTTTCATGCTA+CGG - chr1_1:68418039-68418058 None:intergenic 40.0%
TGCATTGCGGATTTCCAATT+CGG - chr1_1:68418151-68418170 None:intergenic 40.0%
TGAAGATCACGAAAACCTAG+AGG - chr1_1:68418502-68418521 None:intergenic 40.0%
CGCTTGCGAAAATCACTTTA+TGG + chr1_1:68418541-68418560 Msa0038920:intron 40.0%
AGTGCTATGCTGAAATCCAA+TGG - chr1_1:68418620-68418639 None:intergenic 40.0%
GGTCCACTAAGTTACTTCTT+GGG + chr1_1:68418790-68418809 Msa0038920:intron 40.0%
AGTGATATTATTGCTCGAGC+AGG + chr1_1:68418868-68418887 Msa0038920:intron 40.0%
GCAAGACTTCGATATAGAGT+GGG - chr1_1:68418976-68418995 None:intergenic 40.0%
TGCAAGACTTCGATATAGAG+TGG - chr1_1:68418977-68418996 None:intergenic 40.0%
ACTCTATATCGAAGTCTTGC+AGG + chr1_1:68418976-68418995 Msa0038920:intron 40.0%
AAAACATATGGTCGGTGCAA+GGG - chr1_1:68419077-68419096 None:intergenic 40.0%
TGCGTTTGAGGGAAAACATA+TGG - chr1_1:68419089-68419108 None:intergenic 40.0%
ATAACGCAGAATGCGTTTGA+GGG - chr1_1:68419100-68419119 None:intergenic 40.0%
GAGATGCAAACCATAGTGTA+GGG - chr1_1:68419133-68419152 None:intergenic 40.0%
AGAGATGCAAACCATAGTGT+AGG - chr1_1:68419134-68419153 None:intergenic 40.0%
ATAAGTTTCTCGATAGGGGA+TGG - chr1_1:68419159-68419178 None:intergenic 40.0%
AATAGCCAGATGTAGAACGA+CGG - chr1_1:68419221-68419240 None:intergenic 40.0%
TCTGGCTATTGTGTGTTTCT+TGG + chr1_1:68419231-68419250 Msa0038920:intron 40.0%
GGAAATGAAGTTCCAAGAGA+AGG - chr1_1:68419371-68419390 None:intergenic 40.0%
!! GTTAGTGCCATTTACCTTTC+TGG + chr1_1:68419426-68419445 Msa0038920:intron 40.0%
GCGCACTAAACATATTGAGA+TGG + chr1_1:68419467-68419486 Msa0038920:intron 40.0%
ATTGCTGACATCTTCACCAA+AGG + chr1_1:68419561-68419580 Msa0038920:intron 40.0%
CAATTGTAGCACTAGCATAG+TGG + chr1_1:68414697-68414716 Msa0038920:intron 40.0%
TCTTCCATTCTACGTCTTGT+TGG + chr1_1:68419917-68419936 Msa0038920:CDS 40.0%
CATCACCAATCAAATGGTTG+AGG + chr1_1:68420039-68420058 Msa0038920:CDS 40.0%
! TTTGAGGTCCTATAATGGCA+AGG + chr1_1:68420202-68420221 Msa0038920:intron 40.0%
CAGTAGATCCTTGCCATTAT+AGG - chr1_1:68420213-68420232 None:intergenic 40.0%
ATCTACTGCCTCTTTCTGAT+TGG + chr1_1:68420225-68420244 Msa0038920:intron 40.0%
GCTCAATTCCAATCAGAAAG+AGG - chr1_1:68420236-68420255 None:intergenic 40.0%
CATCAATGTTGCCCAAATGA+AGG - chr1_1:68420274-68420293 None:intergenic 40.0%
! GGCCGTAGTAAGAGATTTTA+TGG - chr1_1:68420451-68420470 None:intergenic 40.0%
! TGAGACTTTGTTGGTTGCTA+AGG - chr1_1:68420969-68420988 None:intergenic 40.0%
ATTGCCAAGAATCGAAGTGT+AGG - chr1_1:68421243-68421262 None:intergenic 40.0%
!!! TTGTTTTTTTTTGGTGGCCG+AGG + chr1_1:68421304-68421323 Msa0038920:intron 40.0%
!! TGGAATGCTTGTTATCCACA+TGG - chr1_1:68421717-68421736 None:intergenic 40.0%
! TACATCTTACGCCTTATTCG+TGG - chr1_1:68421737-68421756 None:intergenic 40.0%
GTATTCAACTCCAACATGGA+TGG - chr1_1:68421813-68421832 None:intergenic 40.0%
ATGAGGAATAGGAAAATCCC+AGG - chr1_1:68421851-68421870 None:intergenic 40.0%
GGTGTCTATCAATGAGGAAT+AGG - chr1_1:68421862-68421881 None:intergenic 40.0%
GGCGAGATTGTAAGAATCTA+AGG - chr1_1:68421883-68421902 None:intergenic 40.0%
CAACTAGAAGACACCGTAAA+AGG - chr1_1:68422268-68422287 None:intergenic 40.0%
CATCTTAATGTCTCGGTTGA+AGG + chr1_1:68422382-68422401 Msa0038920:CDS 40.0%
GACGTTCATAGTTAAACTGC+TGG + chr1_1:68422549-68422568 Msa0038920:intron 40.0%
!! CAAACAAGTAGGAGTTTTGG+AGG - chr1_1:68422944-68422963 None:intergenic 40.0%
GATCTTATGCTTCCTGTTTC+TGG + chr1_1:68422998-68423017 Msa0038920:CDS 40.0%
TGAGTTGTTGAACCAGAAAC+AGG - chr1_1:68423013-68423032 None:intergenic 40.0%
TCTCCTATCTCAGCTGTATT+AGG + chr1_1:68423148-68423167 Msa0038920:CDS 40.0%
CTGTATTAGGCCCAAATAAC+TGG + chr1_1:68423161-68423180 Msa0038920:CDS 40.0%
TAGGCCCAAATAACTGGTTA+TGG + chr1_1:68423167-68423186 Msa0038920:CDS 40.0%
CCAAGCCATAACCAGTTATT+TGG - chr1_1:68423175-68423194 None:intergenic 40.0%
CCAAATAACTGGTTATGGCT+TGG + chr1_1:68423172-68423191 Msa0038920:CDS 40.0%
ACACAGGTGAAGTGTATAAC+TGG + chr1_1:68423278-68423297 Msa0038920:CDS 40.0%
ACTGGACTTCCAAAGTTATG+TGG + chr1_1:68423296-68423315 Msa0038920:CDS 40.0%
GCACTAAAGATTGATGAGGA+AGG - chr1_1:68423489-68423508 None:intergenic 40.0%
GCTTGCACTAAAGATTGATG+AGG - chr1_1:68423493-68423512 None:intergenic 40.0%
CCTTGCACCAAAATGTACAT+TGG - chr1_1:68423518-68423537 None:intergenic 40.0%
!! CCAATGTACATTTTGGTGCA+AGG + chr1_1:68423515-68423534 Msa0038920:CDS 40.0%
GAGTGTAAAGGCAAAGATGT+TGG + chr1_1:68423718-68423737 Msa0038920:CDS 40.0%
AGGCAAAGATGTTGGAGTTA+TGG + chr1_1:68423726-68423745 Msa0038920:CDS 40.0%
GATGTTGGAGTTATGGTTTG+TGG + chr1_1:68423733-68423752 Msa0038920:CDS 40.0%
GTTGCTAGAATTTGTGCTTC+TGG + chr1_1:68423778-68423797 Msa0038920:CDS 40.0%
TGAAGAGCCACACATTCCTA+AGG + chr1_1:68413228-68413247 Msa0038920:CDS 45.0%
TTGGATCTTGTTGCCCACAA+AGG + chr1_1:68413289-68413308 Msa0038920:CDS 45.0%
ATTGTAGGCATGACCAGGAA+TGG - chr1_1:68413786-68413805 None:intergenic 45.0%
TTCCTGGTCATGCCTACAAT+TGG + chr1_1:68413786-68413805 Msa0038920:CDS 45.0%
TTCCAATTGTAGGCATGACC+AGG - chr1_1:68413791-68413810 None:intergenic 45.0%
CATATGGAGGTGAGCAAAAC+TGG - chr1_1:68413892-68413911 None:intergenic 45.0%
CACCTCCATATGCACAAAGA+AGG + chr1_1:68413900-68413919 Msa0038920:CDS 45.0%
TCTCGCCTTCTTTGTGCATA+TGG - chr1_1:68413908-68413927 None:intergenic 45.0%
!!! ACCCTCCGATTTTTAGAGTC+TGG + chr1_1:68413987-68414006 Msa0038920:intron 45.0%
! CTCCAGACTCTAAAAATCGG+AGG - chr1_1:68413992-68414011 None:intergenic 45.0%
!! ATGGTTGTTGTTGGTAGTGG+TGG - chr1_1:68414622-68414641 None:intergenic 45.0%
ATTAAGGAACAGCAGGTGTG+TGG - chr1_1:68414936-68414955 None:intergenic 45.0%
TGTGTGGAAGAAGAAACACG+CGG - chr1_1:68415009-68415028 None:intergenic 45.0%
ATTAAGGAACAGCAGGTGTG+TGG - chr1_1:68414936-68414955 None:intergenic 45.0%
ATTAAGGAACAGCAGGTGTG+TGG - chr1_1:68414936-68414955 None:intergenic 45.0%
TGTGTGGAAGAAGAAACACG+CGG - chr1_1:68415009-68415028 None:intergenic 45.0%
ATTAAGGAACAGCAGGTGTG+TGG - chr1_1:68414936-68414955 None:intergenic 45.0%
!! GGTGTCGTTATTGCTGTGTT+CGG - chr1_1:68415407-68415426 None:intergenic 45.0%
TTTCTTGGAACCGTTGAGCA+TGG - chr1_1:68415467-68415486 None:intergenic 45.0%
GGCAGGATGAAACTCTTTCT+TGG - chr1_1:68415482-68415501 None:intergenic 45.0%
CCTAATATTGGAGACGGCAA+AGG - chr1_1:68415503-68415522 None:intergenic 45.0%
CCTTTGCCGTCTCCAATATT+AGG + chr1_1:68415500-68415519 Msa0038920:intron 45.0%
AGTGGTCCATTGTTCGTACT+CGG - chr1_1:68415668-68415687 None:intergenic 45.0%
GGAATTGGGTTCCAGAATAG+TGG - chr1_1:68415746-68415765 None:intergenic 45.0%
TGACAGTAGGCAGAGACATT+GGG - chr1_1:68415877-68415896 None:intergenic 45.0%
TTGACAGTAGGCAGAGACAT+TGG - chr1_1:68415878-68415897 None:intergenic 45.0%
ACTAGACGGTGATTGTTGAC+TGG - chr1_1:68415943-68415962 None:intergenic 45.0%
AGGATTACTTTGGCGAAGCA+GGG - chr1_1:68416013-68416032 None:intergenic 45.0%
ACGCTGGAAGAGGATTACTT+TGG - chr1_1:68416023-68416042 None:intergenic 45.0%
!! GGCTTCTTCTAAAGTGAGCA+TGG - chr1_1:68416061-68416080 None:intergenic 45.0%
! CACTTTAGAAGAAGCCGGTA+TGG + chr1_1:68416065-68416084 Msa0038920:intron 45.0%
AGAAGCCGGTATGGCTAAAA+TGG + chr1_1:68416074-68416093 Msa0038920:intron 45.0%
!!! GCTTGCCATTTTAGCCATAC+CGG - chr1_1:68416082-68416101 None:intergenic 45.0%
ATGGCTAAAATGGCAAGCAC+CGG + chr1_1:68416084-68416103 Msa0038920:intron 45.0%
GAGAACGAGAACGATTGTTG+GGG - chr1_1:68416179-68416198 None:intergenic 45.0%
CGAGAACGAGAACGATTGTT+GGG - chr1_1:68416180-68416199 None:intergenic 45.0%
ACGAGAACGAGAACGATTGT+TGG - chr1_1:68416181-68416200 None:intergenic 45.0%
AACAATCGTTCTCGTTCTCG+TGG + chr1_1:68416180-68416199 Msa0038920:intron 45.0%
ATGTCAGTCGGTATCTGAGA+TGG - chr1_1:68416459-68416478 None:intergenic 45.0%
! TCAGATACCGACTGACATTG+AGG + chr1_1:68416461-68416480 Msa0038920:intron 45.0%
ATAGCTGCCTCAATGTCAGT+CGG - chr1_1:68416471-68416490 None:intergenic 45.0%
TCCTGACAATCAGTGGTACA+TGG + chr1_1:68416512-68416531 Msa0038920:intron 45.0%
! TCCATGTACCACTGATTGTC+AGG - chr1_1:68416516-68416535 None:intergenic 45.0%
GGTGGAAATTTGTGTGTGTC+CGG - chr1_1:68416658-68416677 None:intergenic 45.0%
GTAAGACCGACAAAACTGGA+GGG - chr1_1:68416879-68416898 None:intergenic 45.0%
! CCATTTTGTGAGGATGTGTG+AGG - chr1_1:68417362-68417381 None:intergenic 45.0%
CCTCACACATCCTCACAAAA+TGG + chr1_1:68417359-68417378 Msa0038920:intron 45.0%
! CTTCTGTTCCACCATCGTTT+TGG + chr1_1:68417441-68417460 Msa0038920:intron 45.0%
AGAGCATGATGCCAAAACGA+TGG - chr1_1:68417455-68417474 None:intergenic 45.0%
TTGGCATCATGCTCTCAACA+TGG + chr1_1:68417460-68417479 Msa0038920:intron 45.0%
CGATGGTACAAGAGTTGAGT+TGG - chr1_1:68417536-68417555 None:intergenic 45.0%
!! ATGGTAGGTGACGGGAATAA+CGG - chr1_1:68417605-68417624 None:intergenic 45.0%
TCTACTCCGTGTGTCTTCTT+GGG + chr1_1:68417644-68417663 Msa0038920:intron 45.0%
GGATAACCCAAGAAGACACA+CGG - chr1_1:68417653-68417672 None:intergenic 45.0%
GGTTATCCACTGAACCATAG+AGG + chr1_1:68417665-68417684 Msa0038920:intron 45.0%
GGTGAGTGTATCTTGGTGAA+GGG - chr1_1:68417764-68417783 None:intergenic 45.0%
AGGTGAGTGTATCTTGGTGA+AGG - chr1_1:68417765-68417784 None:intergenic 45.0%
AGGTGAAGGTGAGTGTATCT+TGG - chr1_1:68417771-68417790 None:intergenic 45.0%
! AAGGGTGTAGGTCATCATCT+AGG - chr1_1:68417808-68417827 None:intergenic 45.0%
! TATGCACTAGGTAAGGGTGT+AGG - chr1_1:68417820-68417839 None:intergenic 45.0%
GGTTTATTGAGGAGAGTGGT+CGG - chr1_1:68417907-68417926 None:intergenic 45.0%
!! GGTGAGTTGATTGAAGAGGT+CGG - chr1_1:68417944-68417963 None:intergenic 45.0%
!! AGTGGGTGAGTTGATTGAAG+AGG - chr1_1:68417948-68417967 None:intergenic 45.0%
TGATAGTACGTGTAGGTGGT+GGG - chr1_1:68418012-68418031 None:intergenic 45.0%
GGTAATGCCTTTCATGCTAC+GGG - chr1_1:68418038-68418057 None:intergenic 45.0%
TAGGTATGGGAGAGATCATG+TGG - chr1_1:68418102-68418121 None:intergenic 45.0%
GCATTGCGGATTTCCAATTC+GGG - chr1_1:68418150-68418169 None:intergenic 45.0%
CGAATAAGGTTAGCATCACC+AGG - chr1_1:68418226-68418245 None:intergenic 45.0%
CTGATGAATAGGCCAGGATT+TGG - chr1_1:68418419-68418438 None:intergenic 45.0%
ATCTAGCTGATGAATAGGCC+AGG - chr1_1:68418425-68418444 None:intergenic 45.0%
GCATGTAGACTGTCTCATGA+AGG - chr1_1:68418474-68418493 None:intergenic 45.0%
GTCTACATGCATCAACCTCT+AGG + chr1_1:68418484-68418503 Msa0038920:intron 45.0%
GCTATGCTGAAATCCAATGG+TGG - chr1_1:68418617-68418636 None:intergenic 45.0%
AAGACATATCAGAACCACGC+CGG - chr1_1:68418666-68418685 None:intergenic 45.0%
! TTTTCGAAGATCATGGGAGG+AGG - chr1_1:68418725-68418744 None:intergenic 45.0%
! GGATTTTCGAAGATCATGGG+AGG - chr1_1:68418728-68418747 None:intergenic 45.0%
!! AGATGTAAGGAGTGCCATGA+TGG - chr1_1:68418749-68418768 None:intergenic 45.0%
! TAGTGGACCCAAATCCTTCA+TGG - chr1_1:68418779-68418798 None:intergenic 45.0%
GGGTCCACTAAGTTACTTCT+TGG + chr1_1:68418789-68418808 Msa0038920:intron 45.0%
ATTGCCGTGACTAGACATGA+TGG + chr1_1:68418814-68418833 Msa0038920:intron 45.0%
TCCACCATCATGTCTAGTCA+CGG - chr1_1:68418821-68418840 None:intergenic 45.0%
TAGCATAAGTACTCTGGCTG+AGG - chr1_1:68418849-68418868 None:intergenic 45.0%
!! AGCTTCTGTTTGGTGTCAAC+TGG - chr1_1:68418922-68418941 None:intergenic 45.0%
! AGTGGTACTGAGCTTCTGTT+TGG - chr1_1:68418932-68418951 None:intergenic 45.0%
AGCATAAGAGATGTCAGGTC+GGG - chr1_1:68419025-68419044 None:intergenic 45.0%
CAGCATAAGAGATGTCAGGT+CGG - chr1_1:68419026-68419045 None:intergenic 45.0%
TGGACAGCATAAGAGATGTC+AGG - chr1_1:68419030-68419049 None:intergenic 45.0%
CATCTCTTATGCTGTCCAAC+AGG + chr1_1:68419032-68419051 Msa0038920:intron 45.0%
GCATATGAAGACACACCTGT+TGG - chr1_1:68419050-68419069 None:intergenic 45.0%
AAACATATGGTCGGTGCAAG+GGG - chr1_1:68419076-68419095 None:intergenic 45.0%
GAAAACATATGGTCGGTGCA+AGG - chr1_1:68419078-68419097 None:intergenic 45.0%
CATAACGCAGAATGCGTTTG+AGG - chr1_1:68419101-68419120 None:intergenic 45.0%
ACGCATTCTGCGTTATGTTC+AGG + chr1_1:68419104-68419123 Msa0038920:intron 45.0%
CGCATTCTGCGTTATGTTCA+GGG + chr1_1:68419105-68419124 Msa0038920:intron 45.0%
! TATACTGATGCTGATTGGGG+TGG + chr1_1:68419183-68419202 Msa0038920:intron 45.0%
ATAGCCAGATGTAGAACGAC+GGG - chr1_1:68419220-68419239 None:intergenic 45.0%
! TTGGTGACAACCTCATTTCC+TGG + chr1_1:68419250-68419269 Msa0038920:intron 45.0%
TCTTGGAAGACCAGGAAATG+AGG - chr1_1:68419263-68419282 None:intergenic 45.0%
TAGTGCAGAAGCTGAGTACA+GGG + chr1_1:68419305-68419324 Msa0038920:intron 45.0%
TTGGCTTCGTAACCTTCTCT+TGG + chr1_1:68419356-68419375 Msa0038920:intron 45.0%
ACTTCATTTCCCACTCTCTC+AGG + chr1_1:68419380-68419399 Msa0038920:intron 45.0%
GCTGTACTGGATTACCAGAA+AGG - chr1_1:68419443-68419462 None:intergenic 45.0%
TGGTGAAGATGTCAGCAATC+TGG - chr1_1:68419560-68419579 None:intergenic 45.0%
CATCAAAAAGAACACGCGGT+AGG - chr1_1:68419587-68419606 None:intergenic 45.0%
AGGTTTACGAACGCTTAGAC+TGG - chr1_1:68419619-68419638 None:intergenic 45.0%
!! ATGGTTGTTGTTGGTAGTGG+TGG - chr1_1:68414622-68414641 None:intergenic 45.0%
GAGACCAACAAGACGTAGAA+TGG - chr1_1:68419924-68419943 None:intergenic 45.0%
!! CTGGCTTGGGCAATTATCTA+TGG + chr1_1:68419973-68419992 Msa0038920:CDS 45.0%
! CTTTTTGCTGCACACACCAT+AGG + chr1_1:68419998-68420017 Msa0038920:CDS 45.0%
! TTGGGGCATCACCAATCAAA+TGG + chr1_1:68420033-68420052 Msa0038920:CDS 45.0%
!! TTTAAAGGGATTGGCTCGAG+TGG + chr1_1:68420790-68420809 Msa0038920:intron 45.0%
ACACACTAAGTGGAGAGAAG+AGG + chr1_1:68420920-68420939 Msa0038920:intron 45.0%
! TGGAGAGAAGAGGTATACTG+TGG + chr1_1:68420930-68420949 Msa0038920:intron 45.0%
ACTTCCGGGTCATTAGTGTT+TGG + chr1_1:68421012-68421031 Msa0038920:intron 45.0%
TCGACCAAACACTAATGACC+CGG - chr1_1:68421019-68421038 None:intergenic 45.0%
ACAGCCTACACTTCGATTCT+TGG + chr1_1:68421236-68421255 Msa0038920:intron 45.0%
GATCTAGCATTTCGTGGCTA+TGG - chr1_1:68421455-68421474 None:intergenic 45.0%
TGCAATCTCTCCAGCTACAT+TGG - chr1_1:68421678-68421697 None:intergenic 45.0%
TACATGTGCATGATTGCTCC+TGG + chr1_1:68421830-68421849 Msa0038920:CDS 45.0%
ACATGTGCATGATTGCTCCT+GGG + chr1_1:68421831-68421850 Msa0038920:CDS 45.0%
TACAATCTCGCCAACATGCT+CGG + chr1_1:68421891-68421910 Msa0038920:CDS 45.0%
CTGATAGTAACCGAGCATGT+TGG - chr1_1:68421904-68421923 None:intergenic 45.0%
!! CAAGGGCATCACAAGGTAAA+AGG - chr1_1:68421931-68421950 None:intergenic 45.0%
CTTGGAGAAGTTGAGCTCAA+GGG - chr1_1:68421948-68421967 None:intergenic 45.0%
GTTAGAGTCGTGTCAATGTC+CGG - chr1_1:68422065-68422084 None:intergenic 45.0%
CATTGCAGCTTGGAAACCTT+TGG - chr1_1:68422241-68422260 None:intergenic 45.0%
CAAAGGTTTCCAAGCTGCAA+TGG + chr1_1:68422239-68422258 Msa0038920:CDS 45.0%
TGTGCAGAATGTGGTCCATA+GGG - chr1_1:68422409-68422428 None:intergenic 45.0%
TTGTGCAGAATGTGGTCCAT+AGG - chr1_1:68422410-68422429 None:intergenic 45.0%
ACTATGGGCCATGTACTCAA+AGG - chr1_1:68422508-68422527 None:intergenic 45.0%
! ACTGCTGGTTGTCTTTATGC+TGG + chr1_1:68422564-68422583 Msa0038920:intron 45.0%
CAACACCAACAAGATCACCA+GGG + chr1_1:68423428-68423447 Msa0038920:CDS 45.0%
TCACCAGGGTCATGGATTTA+TGG + chr1_1:68423442-68423461 Msa0038920:CDS 45.0%
GAACCATAAATCCATGACCC+TGG - chr1_1:68423448-68423467 None:intergenic 45.0%
CCTCACTTACTCTTGAGATC+AGG - chr1_1:68423541-68423560 None:intergenic 45.0%
CCTGATCTCAAGAGTAAGTG+AGG + chr1_1:68423538-68423557 Msa0038920:intron 45.0%
ATCTCAAGAGTAAGTGAGGC+AGG + chr1_1:68423542-68423561 Msa0038920:intron 45.0%
TCTCAAGAGTAAGTGAGGCA+GGG + chr1_1:68423543-68423562 Msa0038920:intron 45.0%
!!! ATTTTATTTTATTTTTTTGA+AGG + chr1_1:68413388-68413407 Msa0038920:intron 5.0%
!!! TTAAATTTTTAATAATTTTC+GGG - chr1_1:68416719-68416738 None:intergenic 5.0%
TTTCCTGAGACGTCCATTCC+TGG + chr1_1:68413770-68413789 Msa0038920:CDS 50.0%
CGCCTTCTTTGTGCATATGG+AGG - chr1_1:68413905-68413924 None:intergenic 50.0%
GTAGATGGGAAGCGAAGTTC+AGG + chr1_1:68414501-68414520 Msa0038920:intron 50.0%
!! GTTGTTGTTGGTAGTGGTGG+TGG - chr1_1:68414619-68414638 None:intergenic 50.0%
!! GTACAACAGGTGCTGTTCGT+CGG - chr1_1:68415085-68415104 None:intergenic 50.0%
!! CGATGGATTGCGTGTACAAC+AGG - chr1_1:68415098-68415117 None:intergenic 50.0%
AACACACGTTCTGTTCGCGA+TGG - chr1_1:68415115-68415134 None:intergenic 50.0%
!! GTACAACAGGTGCTGTTCGT+CGG - chr1_1:68415085-68415104 None:intergenic 50.0%
!! CGATGGATTGCGTGTACAAC+AGG - chr1_1:68415098-68415117 None:intergenic 50.0%
ACGGTTACAACAGAGAGCGA+TGG - chr1_1:68415324-68415343 None:intergenic 50.0%
GCTGTGTTCGGAATCAGACA+TGG - chr1_1:68415395-68415414 None:intergenic 50.0%
ATATTGGAGACGGCAAAGGC+AGG - chr1_1:68415499-68415518 None:intergenic 50.0%
GCATCACATTGTCCCGTCTA+CGG + chr1_1:68415615-68415634 Msa0038920:intron 50.0%
!! CCATTGTTCGTACTCGGTGT+CGG - chr1_1:68415662-68415681 None:intergenic 50.0%
AAGAACAGTGGCGTCAAGAG+TGG - chr1_1:68415686-68415705 None:intergenic 50.0%
TTGACGCCACTGTTCTTCAG+TGG + chr1_1:68415689-68415708 Msa0038920:intron 50.0%
TTGCTCAAGAGTGACAGCAC+GGG - chr1_1:68415824-68415843 None:intergenic 50.0%
CTTGCTCAAGAGTGACAGCA+CGG - chr1_1:68415825-68415844 None:intergenic 50.0%
AGAGTTCTCCAACACTCGCA+TGG + chr1_1:68415843-68415862 Msa0038920:intron 50.0%
AAAGTCCTCCATGCGAGTGT+TGG - chr1_1:68415854-68415873 None:intergenic 50.0%
GAGAGCCGACATTTCTCAAC+TGG - chr1_1:68415921-68415940 None:intergenic 50.0%
ATTACTTTGGCGAAGCAGGG+TGG - chr1_1:68416010-68416029 None:intergenic 50.0%
GAGGATTACTTTGGCGAAGC+AGG - chr1_1:68416014-68416033 None:intergenic 50.0%
TCCTCTTCCAGCGTTCTATC+AGG + chr1_1:68416029-68416048 Msa0038920:intron 50.0%
TTCCAGCGTTCTATCAGGCT+CGG + chr1_1:68416034-68416053 Msa0038920:intron 50.0%
AACGAGAACGATTGTTGGGG+CGG - chr1_1:68416176-68416195 None:intergenic 50.0%
AACCGAAGTGGACCTCAATC+TGG + chr1_1:68416231-68416250 Msa0038920:intron 50.0%
CTCCAGATTGAGGTCCACTT+CGG - chr1_1:68416236-68416255 None:intergenic 50.0%
TACTGTTGTTGCTGCCAAGG+AGG - chr1_1:68416288-68416307 None:intergenic 50.0%
GGATACTGTTGTTGCTGCCA+AGG - chr1_1:68416291-68416310 None:intergenic 50.0%
AGCAACAACAGTATCCAGCC+TGG + chr1_1:68416295-68416314 Msa0038920:intron 50.0%
AGTATCCAGCCTGGCAACAA+TGG + chr1_1:68416304-68416323 Msa0038920:intron 50.0%
GTATCCAGCCTGGCAACAAT+GGG + chr1_1:68416305-68416324 Msa0038920:intron 50.0%
TATCCAGCCTGGCAACAATG+GGG + chr1_1:68416306-68416325 Msa0038920:intron 50.0%
TGAGATGTGGGGTAAGGACA+TGG - chr1_1:68416360-68416379 None:intergenic 50.0%
GTAGTAGCTGCATATGCCTG+AGG - chr1_1:68416435-68416454 None:intergenic 50.0%
TCCACACTCCTGACAATCAG+TGG + chr1_1:68416505-68416524 Msa0038920:intron 50.0%
! ACCACTGATTGTCAGGAGTG+TGG - chr1_1:68416509-68416528 None:intergenic 50.0%
TACTGGCGCAACATCTCACA+CGG + chr1_1:68416536-68416555 Msa0038920:intron 50.0%
GTTATTGTTGGCAACGGCCA+TGG + chr1_1:68416615-68416634 Msa0038920:intron 50.0%
GGCCATGGAATTCCGATTCA+CGG + chr1_1:68416630-68416649 Msa0038920:intron 50.0%
TGCCGTGAATCGGAATTCCA+TGG - chr1_1:68416635-68416654 None:intergenic 50.0%
!! GTGAATAGGTTGGTGAGAGG+TGG - chr1_1:68416676-68416695 None:intergenic 50.0%
!! ACCACTCCCTCCAGTTTTGT+CGG + chr1_1:68416870-68416889 Msa0038920:intron 50.0%
CGTAAGACCGACAAAACTGG+AGG - chr1_1:68416880-68416899 None:intergenic 50.0%
GGACGTAAGACCGACAAAAC+TGG - chr1_1:68416883-68416902 None:intergenic 50.0%
GCATGATGCCAAAACGATGG+TGG - chr1_1:68417452-68417471 None:intergenic 50.0%
GTGTGTAAGTGGGATCACGA+TGG - chr1_1:68417553-68417572 None:intergenic 50.0%
CTCTACTCCGTGTGTCTTCT+TGG + chr1_1:68417643-68417662 Msa0038920:intron 50.0%
! GTTGGTTGGTTATGTGCAGC+CGG - chr1_1:68417866-68417885 None:intergenic 50.0%
TCAATAGTGGTCGGTGGTGT+TGG - chr1_1:68417884-68417903 None:intergenic 50.0%
AGTGGTCGGTCAATAGTGGT+CGG - chr1_1:68417893-68417912 None:intergenic 50.0%
! GAGTTGATTGAAGAGGTCGG+AGG - chr1_1:68417941-68417960 None:intergenic 50.0%
GTGATAGTACGTGTAGGTGG+TGG - chr1_1:68418013-68418032 None:intergenic 50.0%
GTGGTGATAGTACGTGTAGG+TGG - chr1_1:68418016-68418035 None:intergenic 50.0%
ATCACCACCCGTAGCATGAA+AGG + chr1_1:68418028-68418047 Msa0038920:intron 50.0%
AATGCCTTTCATGCTACGGG+TGG - chr1_1:68418035-68418054 None:intergenic 50.0%
TGGCTCCTTTGAGCGCTATA+AGG + chr1_1:68418282-68418301 Msa0038920:intron 50.0%
! ACGAGCCTTATAGCGCTCAA+AGG - chr1_1:68418290-68418309 None:intergenic 50.0%
CGCTATAAGGCTCGTCTTGT+AGG + chr1_1:68418295-68418314 Msa0038920:intron 50.0%
AAGGCTCGTCTTGTAGGTGA+TGG + chr1_1:68418301-68418320 Msa0038920:intron 50.0%
TGATGAGACTTTCAGCCCAG+TGG + chr1_1:68418351-68418370 Msa0038920:intron 50.0%
TTTCAGCCCAGTGGTCAAAC+CGG + chr1_1:68418360-68418379 Msa0038920:intron 50.0%
AGAACTGTACGAATCGTCGC+CGG - chr1_1:68418382-68418401 None:intergenic 50.0%
CCAGGATTTGGACAGTGCAA+TGG - chr1_1:68418407-68418426 None:intergenic 50.0%
CCATTGCACTGTCCAAATCC+TGG + chr1_1:68418404-68418423 Msa0038920:intron 50.0%
GCAAGCGGCACACATAATCT+GGG - chr1_1:68418528-68418547 None:intergenic 50.0%
AGACAAAGTCAGCAAAGCGC+TGG - chr1_1:68418594-68418613 None:intergenic 50.0%
! GCTGACTTTGTCTCCACCAT+TGG + chr1_1:68418601-68418620 Msa0038920:intron 50.0%
TCACTCTTCATATACCGGCG+TGG + chr1_1:68418649-68418668 Msa0038920:intron 50.0%
AGTAGCAGAAGGTTTGCACG+AGG - chr1_1:68418899-68418918 None:intergenic 50.0%
GTGTCAACTGGAGTAGCAGA+AGG - chr1_1:68418910-68418929 None:intergenic 50.0%
GGGATCGTCATATGATGTGC+CGG - chr1_1:68418956-68418975 None:intergenic 50.0%
GTTCAGGGAACCCTACACTA+TGG + chr1_1:68419120-68419139 Msa0038920:intron 50.0%
ATGTAGAACGACGGGTGTCT+GGG - chr1_1:68419212-68419231 None:intergenic 50.0%
! CGAAAGTGTGGGTTGTCTCT+TGG - chr1_1:68419280-68419299 None:intergenic 50.0%
CTAGTGCAGAAGCTGAGTAC+AGG + chr1_1:68419304-68419323 Msa0038920:intron 50.0%
AGTGCAGAAGCTGAGTACAG+GGG + chr1_1:68419306-68419325 Msa0038920:intron 50.0%
!! GTACAGGGGTGTTGCTAATG+TGG + chr1_1:68419320-68419339 Msa0038920:intron 50.0%
! TTAGTGCGCTGATGCTGTAC+TGG - chr1_1:68419456-68419475 None:intergenic 50.0%
GTTCGAGAAAAGGTAGCTCG+TGG + chr1_1:68419501-68419520 Msa0038920:intron 50.0%
GGTGACGAGATGGAACATGA+AGG - chr1_1:68419539-68419558 None:intergenic 50.0%
! TCAGCAATCTGGTGACGAGA+TGG - chr1_1:68419549-68419568 None:intergenic 50.0%
!! GTTGTTGTTGGTAGTGGTGG+TGG - chr1_1:68414619-68414638 None:intergenic 50.0%
AAGGTCCAGGGTTCAAACCT+CGG - chr1_1:68421324-68421343 None:intergenic 50.0%
TGATTTCCCAGGCGTTAGAG+TGG + chr1_1:68421636-68421655 Msa0038920:intron 50.0%
!! TTGAGCTCAAGGGCATCACA+AGG - chr1_1:68421938-68421957 None:intergenic 50.0%
CCTTGGAGAAGTTGAGCTCA+AGG - chr1_1:68421949-68421968 None:intergenic 50.0%
CCTTGAGCTCAACTTCTCCA+AGG + chr1_1:68421946-68421965 Msa0038920:CDS 50.0%
!! AAAAGGGTGCCATTGCAGCT+TGG - chr1_1:68422251-68422270 None:intergenic 50.0%
! GCTGCAATGGCACCCTTTTA+CGG + chr1_1:68422252-68422271 Msa0038920:CDS 50.0%
CAGGCATGAGCAGATTGTGA+TGG + chr1_1:68422838-68422857 Msa0038920:intron 50.0%
! GAGCAGATTGTGATGGTGAG+TGG + chr1_1:68422845-68422864 Msa0038920:CDS 50.0%
! CAGATTGTGATGGTGAGTGG+TGG + chr1_1:68422848-68422867 Msa0038920:CDS 50.0%
GGGCCTAATACAGCTGAGAT+AGG - chr1_1:68423154-68423173 None:intergenic 50.0%
CCTGGTGATCTTGTTGGTGT+TGG - chr1_1:68423430-68423449 None:intergenic 50.0%
CCAACACCAACAAGATCACC+AGG + chr1_1:68423427-68423446 Msa0038920:CDS 50.0%
CATGACCCTGGTGATCTTGT+TGG - chr1_1:68423436-68423455 None:intergenic 50.0%
CAACAAGATCACCAGGGTCA+TGG + chr1_1:68423434-68423453 Msa0038920:CDS 50.0%
TGACCAGGAATGGACGTCTC+AGG - chr1_1:68413776-68413795 None:intergenic 55.0%
GCGTGATGAAGGAGGAGGTA+CGG - chr1_1:68414968-68414987 None:intergenic 55.0%
!! AAACACGCGGTGCTGTTCGT+CGG - chr1_1:68414996-68415015 None:intergenic 55.0%
GCGGCAGATTAAGGAACAGC+AGG - chr1_1:68415032-68415051 None:intergenic 55.0%
GCGTGATGAAGGAGGAGGTA+CGG - chr1_1:68414968-68414987 None:intergenic 55.0%
GCGTGATGAAGGAGGAGGTA+CGG - chr1_1:68414968-68414987 None:intergenic 55.0%
!! AAACACGCGGTGCTGTTCGT+CGG - chr1_1:68414996-68415015 None:intergenic 55.0%
GCGGCAGATTAAGGAACAGC+AGG - chr1_1:68415032-68415051 None:intergenic 55.0%
GCGTGATGAAGGAGGAGGTA+CGG - chr1_1:68414968-68414987 None:intergenic 55.0%
GGAACCATTAGTGGCAGAGG+CGG - chr1_1:68415428-68415447 None:intergenic 55.0%
GCCTCTGCCACTAATGGTTC+CGG + chr1_1:68415427-68415446 Msa0038920:intron 55.0%
CCGTTGAGCATGGTGGCTTT+GGG - chr1_1:68415457-68415476 None:intergenic 55.0%
CCCAAAGCCACCATGCTCAA+CGG + chr1_1:68415454-68415473 Msa0038920:intron 55.0%
ACCGTTGAGCATGGTGGCTT+TGG - chr1_1:68415458-68415477 None:intergenic 55.0%
CTTGGAACCGTTGAGCATGG+TGG - chr1_1:68415464-68415483 None:intergenic 55.0%
!! GCGGAGCTTTTTCCGTAGAC+GGG - chr1_1:68415630-68415649 None:intergenic 55.0%
!! GGCGGAGCTTTTTCCGTAGA+CGG - chr1_1:68415631-68415650 None:intergenic 55.0%
!! TTCGTACTCGGTGTCGGTAG+GGG - chr1_1:68415656-68415675 None:intergenic 55.0%
!! GTTCGTACTCGGTGTCGGTA+GGG - chr1_1:68415657-68415676 None:intergenic 55.0%
!! TGTTCGTACTCGGTGTCGGT+AGG - chr1_1:68415658-68415677 None:intergenic 55.0%
CCGACACCGAGTACGAACAA+TGG + chr1_1:68415659-68415678 Msa0038920:intron 55.0%
ACGATTCCATGCTTCCACGG+CGG - chr1_1:68415770-68415789 None:intergenic 55.0%
GTTCTCCAACACTCGCATGG+AGG + chr1_1:68415846-68415865 Msa0038920:intron 55.0%
GCAACACTGCGGTAAGCTTC+TGG - chr1_1:68415988-68416007 None:intergenic 55.0%
GCCTGATAGAACGCTGGAAG+AGG - chr1_1:68416033-68416052 None:intergenic 55.0%
TTCAGAAGGTCGCTGCTGAG+TGG - chr1_1:68416130-68416149 None:intergenic 55.0%
!! CGCTGAGAGGTGTCTTCAGA+AGG - chr1_1:68416144-68416163 None:intergenic 55.0%
TCTGAAGACACCTCTCAGCG+TGG + chr1_1:68416144-68416163 Msa0038920:intron 55.0%
TCTCGTTCTCGTGGCAACCA+TGG + chr1_1:68416189-68416208 Msa0038920:intron 55.0%
! AGGAGAGGACCATGATGGAG+GGG - chr1_1:68416268-68416287 None:intergenic 55.0%
! GAGGAGAGGACCATGATGGA+GGG - chr1_1:68416269-68416288 None:intergenic 55.0%
CAAGGAGGAGAGGACCATGA+TGG - chr1_1:68416273-68416292 None:intergenic 55.0%
CATCATGGTCCTCTCCTCCT+TGG + chr1_1:68416271-68416290 Msa0038920:intron 55.0%
TTGTTGCTGCCAAGGAGGAG+AGG - chr1_1:68416283-68416302 None:intergenic 55.0%
AGTCCAACCCCATTGTTGCC+AGG - chr1_1:68416316-68416335 None:intergenic 55.0%
GATGTGGGGTAAGGACATGG+AGG - chr1_1:68416357-68416376 None:intergenic 55.0%
GTCCTTACCCCACATCTCAG+TGG + chr1_1:68416361-68416380 Msa0038920:intron 55.0%
GTCCACTGAGATGTGGGGTA+AGG - chr1_1:68416366-68416385 None:intergenic 55.0%
GACGTGTCCACTGAGATGTG+GGG - chr1_1:68416371-68416390 None:intergenic 55.0%
GGACGTGTCCACTGAGATGT+GGG - chr1_1:68416372-68416391 None:intergenic 55.0%
AGGACGTGTCCACTGAGATG+TGG - chr1_1:68416373-68416392 None:intergenic 55.0%
TCTCAGTGGACACGTCCTAC+AGG + chr1_1:68416375-68416394 Msa0038920:intron 55.0%
CCTAGGATGCCTGACTGCTT+CGG - chr1_1:68416405-68416424 None:intergenic 55.0%
! GTCAGGAGTGTGGAGAGACA+TGG - chr1_1:68416499-68416518 None:intergenic 55.0%
GGAATTCCGATTCACGGCAC+CGG + chr1_1:68416636-68416655 Msa0038920:intron 55.0%
!! TTTTCGGGGCATGCAGGACA+TGG - chr1_1:68416704-68416723 None:intergenic 55.0%
CTCATGAGATGTGACAGCCG+TGG + chr1_1:68416831-68416850 Msa0038920:intron 55.0%
AAACTGGAGGGAGTGGTGAC+TGG - chr1_1:68416867-68416886 None:intergenic 55.0%
ACCGACAAAACTGGAGGGAG+TGG - chr1_1:68416874-68416893 None:intergenic 55.0%
TCGGTCTTACGTCCAGTCTC+TGG + chr1_1:68416889-68416908 Msa0038920:intron 55.0%
AAGACGATCGTGCCAGAGAC+TGG - chr1_1:68416904-68416923 None:intergenic 55.0%
AGTCTCTGGCACGATCGTCT+TGG + chr1_1:68416903-68416922 Msa0038920:intron 55.0%
CACGATCGTCTTGGTCATCC+TGG + chr1_1:68416912-68416931 Msa0038920:intron 55.0%
AAGACACACGGAGTAGAGCG+AGG - chr1_1:68417641-68417660 None:intergenic 55.0%
!! TAGTGGTCGGTGGTGTTGGT+TGG - chr1_1:68417880-68417899 None:intergenic 55.0%
GGAGAGTGGTCGGTCAATAG+TGG - chr1_1:68417897-68417916 None:intergenic 55.0%
AGGTCGGAGGTGAGGATTGT+TGG - chr1_1:68417928-68417947 None:intergenic 55.0%
GATTGAAGAGGTCGGAGGTG+AGG - chr1_1:68417936-68417955 None:intergenic 55.0%
!! GGTTGGTAGTGGTGAGGTAG+AGG - chr1_1:68417978-68417997 None:intergenic 55.0%
!! TGATGCGGTTGGGTTGGTAG+TGG - chr1_1:68417989-68418008 None:intergenic 55.0%
CGGGTGGTGATAGTACGTGT+AGG - chr1_1:68418019-68418038 None:intergenic 55.0%
! TGGGATTTGGTTCCTCGTCC+TGG + chr1_1:68418205-68418224 Msa0038920:intron 55.0%
AGGTTAGCATCACCAGGACG+AGG - chr1_1:68418220-68418239 None:intergenic 55.0%
! CTCGTCTTGTAGGTGATGGC+AGG + chr1_1:68418305-68418324 Msa0038920:intron 55.0%
! TGTAGGTGATGGCAGGTCAC+AGG + chr1_1:68418312-68418331 Msa0038920:intron 55.0%
CGCAAGCGGCACACATAATC+TGG - chr1_1:68418529-68418548 None:intergenic 55.0%
GCCGTGACTAGACATGATGG+TGG + chr1_1:68418817-68418836 Msa0038920:intron 55.0%
CAGAAGCTCAGTACCACTGC+CGG + chr1_1:68418934-68418953 Msa0038920:intron 55.0%
! GTCATATGATGTGCCGGCAG+TGG - chr1_1:68418950-68418969 None:intergenic 55.0%
GATGTAGAACGACGGGTGTC+TGG - chr1_1:68419213-68419232 None:intergenic 55.0%
GACACCCGTCGTTCTACATC+TGG + chr1_1:68419213-68419232 Msa0038920:intron 55.0%
GGGTTGTCTCTTGGAAGACC+AGG - chr1_1:68419271-68419290 None:intergenic 55.0%
! GCACTAGAGCGCGAAAGTGT+GGG - chr1_1:68419291-68419310 None:intergenic 55.0%
TGCACTAGAGCGCGAAAGTG+TGG - chr1_1:68419292-68419311 None:intergenic 55.0%
CCAAAGTGGCCTGAGAGAGT+GGG - chr1_1:68419392-68419411 None:intergenic 55.0%
ACCAAAGTGGCCTGAGAGAG+TGG - chr1_1:68419393-68419412 None:intergenic 55.0%
AGAAAAGGTAGCTCGTGGCC+AGG + chr1_1:68419506-68419525 Msa0038920:intron 55.0%
AAGAACACGCGGTAGGCCTT+TGG - chr1_1:68419580-68419599 None:intergenic 55.0%
TAAACCTCCCGCTTCGACTG+CGG + chr1_1:68419632-68419651 Msa0038920:intron 55.0%
CTTGCTCCACTCTAACGCCT+GGG - chr1_1:68421645-68421664 None:intergenic 55.0%
TCTTGCTCCACTCTAACGCC+TGG - chr1_1:68421646-68421665 None:intergenic 55.0%
GTCTCGGTTGAAGGACCCTA+TGG + chr1_1:68422391-68422410 Msa0038920:CDS 55.0%
! GTGATGGTGAGTGGTGGAAG+TGG + chr1_1:68422854-68422873 Msa0038920:CDS 55.0%
GTCTCAGCAGCTGCGTACAA+AGG - chr1_1:68423621-68423640 None:intergenic 55.0%
!! GCGGCGGATTAAGGAACAGC+AGG - chr1_1:68414943-68414962 None:intergenic 60.0%
! TGAAGGAGGAGGTACGGCAG+CGG - chr1_1:68414962-68414981 None:intergenic 60.0%
GGTACGGCAGCGGCAGATTA+AGG - chr1_1:68415041-68415060 None:intergenic 60.0%
! TGAAGGAGGAGGTACGGCAG+CGG - chr1_1:68414962-68414981 None:intergenic 60.0%
!! CAACAGGTGCTGTTCGTCGG+CGG - chr1_1:68415082-68415101 None:intergenic 60.0%
!! GCGGCGGATTAAGGAACAGC+AGG - chr1_1:68414943-68414962 None:intergenic 60.0%
! TGAAGGAGGAGGTACGGCAG+CGG - chr1_1:68414962-68414981 None:intergenic 60.0%
GGTACGGCAGCGGCAGATTA+AGG - chr1_1:68415041-68415060 None:intergenic 60.0%
! TGAAGGAGGAGGTACGGCAG+CGG - chr1_1:68414962-68414981 None:intergenic 60.0%
!! CAACAGGTGCTGTTCGTCGG+CGG - chr1_1:68415082-68415101 None:intergenic 60.0%
GACACCGCCTCTGCCACTAA+TGG + chr1_1:68415421-68415440 Msa0038920:intron 60.0%
GCCGGAACCATTAGTGGCAG+AGG - chr1_1:68415431-68415450 None:intergenic 60.0%
!! TGAGCATGGTGGCTTTGGGC+TGG - chr1_1:68415453-68415472 None:intergenic 60.0%
GCTTCCACGGCGGTGGAATT+GGG - chr1_1:68415760-68415779 None:intergenic 60.0%
TGCTTCCACGGCGGTGGAAT+TGG - chr1_1:68415761-68415780 None:intergenic 60.0%
ATTCCACCGCCGTGGAAGCA+TGG + chr1_1:68415761-68415780 Msa0038920:intron 60.0%
ATTCCATGCTTCCACGGCGG+TGG - chr1_1:68415767-68415786 None:intergenic 60.0%
GAAGCAGGGTGGCAACACTG+CGG - chr1_1:68415999-68416018 None:intergenic 60.0%
GACCGAGCCTGATAGAACGC+TGG - chr1_1:68416039-68416058 None:intergenic 60.0%
GTGCATGGCAGCTTGAGAGC+CGG - chr1_1:68416106-68416125 None:intergenic 60.0%
TCGCTGCTGAGTGGTGTGCA+TGG - chr1_1:68416121-68416140 None:intergenic 60.0%
GAGAACGATTGTTGGGGCGG+CGG - chr1_1:68416173-68416192 None:intergenic 60.0%
AGGGGACGTGGAAACCGAAG+TGG + chr1_1:68416219-68416238 Msa0038920:intron 60.0%
GCGCTAGGAGCTCCAGATTG+AGG - chr1_1:68416246-68416265 None:intergenic 60.0%
GGAGGAGAGGACCATGATGG+AGG - chr1_1:68416270-68416289 None:intergenic 60.0%
CAACCCCATTGTTGCCAGGC+TGG - chr1_1:68416312-68416331 None:intergenic 60.0%
CAGCCTGGCAACAATGGGGT+TGG + chr1_1:68416310-68416329 Msa0038920:intron 60.0%
! GGACATGGAGGCATAGCCCA+CGG - chr1_1:68416345-68416364 None:intergenic 60.0%
GACTGCTTCGGAGGACCTGT+AGG - chr1_1:68416393-68416412 None:intergenic 60.0%
ACAGGTCCTCCGAAGCAGTC+AGG + chr1_1:68416393-68416412 Msa0038920:intron 60.0%
AGGATGCCTGACTGCTTCGG+AGG - chr1_1:68416402-68416421 None:intergenic 60.0%
CCGAAGCAGTCAGGCATCCT+AGG + chr1_1:68416402-68416421 Msa0038920:intron 60.0%
CATCCTAGGACAGCGTCCTC+AGG + chr1_1:68416416-68416435 Msa0038920:intron 60.0%
ATGCCTGAGGACGCTGTCCT+AGG - chr1_1:68416422-68416441 None:intergenic 60.0%
TCTCACACGGCAGCATCACG+AGG + chr1_1:68416549-68416568 Msa0038920:intron 60.0%
!! GTGTGTCCGGTGCCGTGAAT+CGG - chr1_1:68416645-68416664 None:intergenic 60.0%
! GGTTGGTTATGTGCAGCCGG+TGG - chr1_1:68417863-68417882 None:intergenic 60.0%
GGTCGGTCAATAGTGGTCGG+TGG - chr1_1:68417890-68417909 None:intergenic 60.0%
!! CGGTTGGGTTGGTAGTGGTG+AGG - chr1_1:68417984-68418003 None:intergenic 60.0%
!! AGGTGGTGGGTGATGCGGTT+GGG - chr1_1:68417999-68418018 None:intergenic 60.0%
!! TAGGTGGTGGGTGATGCGGT+TGG - chr1_1:68418000-68418019 None:intergenic 60.0%
!! CGTGTAGGTGGTGGGTGATG+CGG - chr1_1:68418004-68418023 None:intergenic 60.0%
GATGGCAGGTCACAGGTTGC+AGG + chr1_1:68418319-68418338 Msa0038920:intron 60.0%
CAGGTCACAGGTTGCAGGTG+TGG + chr1_1:68418324-68418343 Msa0038920:intron 60.0%
!! TCGTCGCCGGTTTGACCACT+GGG - chr1_1:68418369-68418388 None:intergenic 60.0%
!! ATCGTCGCCGGTTTGACCAC+TGG - chr1_1:68418370-68418389 None:intergenic 60.0%
!! GTCAGCAAAGCGCTGGTACC+AGG - chr1_1:68418587-68418606 None:intergenic 60.0%
GATCATGGGAGGAGGTGACG+AGG - chr1_1:68418717-68418736 None:intergenic 60.0%
CCCACTCTCTCAGGCCACTT+TGG + chr1_1:68419389-68419408 Msa0038920:intron 60.0%
GAACATGAAGGACGCGTGCC+TGG - chr1_1:68419527-68419546 None:intergenic 60.0%
AAACCTCCCGCTTCGACTGC+GGG + chr1_1:68419633-68419652 Msa0038920:intron 60.0%
AACCTAGGCGCTCTGCTCCT+AGG + chr1_1:68422676-68422695 Msa0038920:intron 60.0%
! TTCCTAGGAGCAGAGCGCCT+AGG - chr1_1:68422681-68422700 None:intergenic 60.0%
!! GGTACGGCAGCGGCGGATTA+AGG - chr1_1:68414952-68414971 None:intergenic 65.0%
CGGCTGCGTGATGAAGGAGG+AGG - chr1_1:68414973-68414992 None:intergenic 65.0%
CGGCTGCGTGATGAAGGAGG+AGG - chr1_1:68414973-68414992 None:intergenic 65.0%
!! GGTACGGCAGCGGCGGATTA+AGG - chr1_1:68414952-68414971 None:intergenic 65.0%
CGGCTGCGTGATGAAGGAGG+AGG - chr1_1:68414973-68414992 None:intergenic 65.0%
CGGCTGCGTGATGAAGGAGG+AGG - chr1_1:68414973-68414992 None:intergenic 65.0%
!! GGGCTGGCCGGAACCATTAG+TGG - chr1_1:68415437-68415456 None:intergenic 65.0%
!! CATGGTGGCTTTGGGCTGGC+CGG - chr1_1:68415449-68415468 None:intergenic 65.0%
!! TACTCGGTGTCGGTAGGGGC+TGG - chr1_1:68415652-68415671 None:intergenic 65.0%
GGAACCCAATTCCACCGCCG+TGG + chr1_1:68415753-68415772 Msa0038920:intron 65.0%
TCTCGTGGCAACCATGGCCG+CGG + chr1_1:68416195-68416214 Msa0038920:intron 65.0%
TGGCAACCATGGCCGCGGAA+GGG + chr1_1:68416200-68416219 Msa0038920:intron 65.0%
GGTTTCCACGTCCCCTTCCG+CGG - chr1_1:68416215-68416234 None:intergenic 65.0%
CTCCTAGCGCCCCTCCATCA+TGG + chr1_1:68416256-68416275 Msa0038920:intron 65.0%
!! GACCATGATGGAGGGGCGCT+AGG - chr1_1:68416261-68416280 None:intergenic 65.0%
GGGTTGGACTCCACCACCGT+GGG + chr1_1:68416326-68416345 Msa0038920:intron 65.0%
! CATGGAGGCATAGCCCACGG+TGG - chr1_1:68416342-68416361 None:intergenic 65.0%
GGTGGGTGATGCGGTTGGGT+TGG - chr1_1:68417995-68418014 None:intergenic 65.0%
TGAAGCAAGCGCCTCGTGCC+TGG + chr1_1:68418566-68418585 Msa0038920:intron 65.0%
!! AAGCGCTGGTACCAGGCACG+AGG - chr1_1:68418580-68418599 None:intergenic 65.0%
AACCTCCCGCTTCGACTGCG+GGG + chr1_1:68419634-68419653 Msa0038920:intron 65.0%
TCACACCCCCGCAGTCGAAG+CGG - chr1_1:68419643-68419662 None:intergenic 65.0%
GGTGGCCGAGGTTTGAACCC+TGG + chr1_1:68421316-68421335 Msa0038920:intron 65.0%
! AGGAGGAGGTACGGCAGCGG+CGG - chr1_1:68414959-68414978 None:intergenic 70.0%
CGGCGGCTGCGTGATGAAGG+AGG - chr1_1:68414976-68414995 None:intergenic 70.0%
CGTCGGCGGCTGCGTGATGA+AGG - chr1_1:68414979-68414998 None:intergenic 70.0%
!! CACGCGGTGCTGTTCGTCGG+CGG - chr1_1:68414993-68415012 None:intergenic 70.0%
CGGCGGCTGCGTGATGAAGG+AGG - chr1_1:68414976-68414995 None:intergenic 70.0%
CGTCGGCGGCTGCGTGATGA+AGG - chr1_1:68414979-68414998 None:intergenic 70.0%
! AGGAGGAGGTACGGCAGCGG+CGG - chr1_1:68414959-68414978 None:intergenic 70.0%
CGGCGGCTGCGTGATGAAGG+AGG - chr1_1:68414976-68414995 None:intergenic 70.0%
CGTCGGCGGCTGCGTGATGA+AGG - chr1_1:68414979-68414998 None:intergenic 70.0%
!! CACGCGGTGCTGTTCGTCGG+CGG - chr1_1:68414993-68415012 None:intergenic 70.0%
CGGCGGCTGCGTGATGAAGG+AGG - chr1_1:68414976-68414995 None:intergenic 70.0%
CGTCGGCGGCTGCGTGATGA+AGG - chr1_1:68414979-68414998 None:intergenic 70.0%
!! TCGGTGTCGGTAGGGGCTGG+CGG - chr1_1:68415649-68415668 None:intergenic 70.0%
GTGGCAACCATGGCCGCGGA+AGG + chr1_1:68416199-68416218 Msa0038920:intron 70.0%
GGCAACCATGGCCGCGGAAG+GGG + chr1_1:68416201-68416220 Msa0038920:intron 70.0%
GGGGTTGGACTCCACCACCG+TGG + chr1_1:68416325-68416344 Msa0038920:intron 70.0%
! GGAGGCATAGCCCACGGTGG+TGG - chr1_1:68416339-68416358 None:intergenic 70.0%
ACCTCCCGCTTCGACTGCGG+GGG + chr1_1:68419635-68419654 Msa0038920:intron 70.0%
CACACCCCCGCAGTCGAAGC+GGG - chr1_1:68419642-68419661 None:intergenic 70.0%
GCGGCGGTTGCCACGCTGAG+AGG - chr1_1:68416157-68416176 None:intergenic 75.0%
CACGTCCCCTTCCGCGGCCA+TGG - chr1_1:68416209-68416228 None:intergenic 75.0%
CATGGCCGCGGAAGGGGACG+TGG + chr1_1:68416207-68416226 Msa0038920:intron 75.0%
ACCCCCGCAGTCGAAGCGGG+AGG - chr1_1:68419639-68419658 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 68413139 68424138 68413139 ID=Msa0038920;Name=Msa0038920
chr1_1 mRNA 68413139 68424138 68413139 ID=Msa0038920-mRNA-1;Parent=Msa0038920;Name=Msa0038920-mRNA-1;_AED=0.21;_eAED=0.21;_QI=61|1|1|1|0.44|0.4|10|292|702
chr1_1 exon 68413139 68413189 68413139 ID=Msa0038920-mRNA-1:exon:22300;Parent=Msa0038920-mRNA-1
chr1_1 exon 68413211 68413377 68413211 ID=Msa0038920-mRNA-1:exon:22301;Parent=Msa0038920-mRNA-1
chr1_1 exon 68413530 68413638 68413530 ID=Msa0038920-mRNA-1:exon:22302;Parent=Msa0038920-mRNA-1
chr1_1 exon 68413743 68413931 68413743 ID=Msa0038920-mRNA-1:exon:22303;Parent=Msa0038920-mRNA-1
chr1_1 exon 68414505 68414593 68414505 ID=Msa0038920-mRNA-1:exon:22304;Parent=Msa0038920-mRNA-1
chr1_1 exon 68419915 68420060 68419915 ID=Msa0038920-mRNA-1:exon:22305;Parent=Msa0038920-mRNA-1
chr1_1 exon 68421647 68421974 68421647 ID=Msa0038920-mRNA-1:exon:22306;Parent=Msa0038920-mRNA-1
chr1_1 exon 68422197 68422437 68422197 ID=Msa0038920-mRNA-1:exon:22307;Parent=Msa0038920-mRNA-1
chr1_1 exon 68422841 68423550 68422841 ID=Msa0038920-mRNA-1:exon:22308;Parent=Msa0038920-mRNA-1
chr1_1 exon 68423707 68424138 68423707 ID=Msa0038920-mRNA-1:exon:22309;Parent=Msa0038920-mRNA-1
chr1_1 five_prime_UTR 68413139 68413189 68413139 ID=Msa0038920-mRNA-1:five_prime_utr;Parent=Msa0038920-mRNA-1
chr1_1 five_prime_UTR 68413211 68413220 68413211 ID=Msa0038920-mRNA-1:five_prime_utr;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68413221 68413377 68413221 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68413530 68413638 68413530 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68413743 68413931 68413743 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68414505 68414593 68414505 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68419915 68420060 68419915 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68421647 68421974 68421647 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68422197 68422437 68422197 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68422841 68423550 68422841 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 CDS 68423707 68423846 68423707 ID=Msa0038920-mRNA-1:cds;Parent=Msa0038920-mRNA-1
chr1_1 three_prime_UTR 68423847 68424138 68423847 ID=Msa0038920-mRNA-1:three_prime_utr;Parent=Msa0038920-mRNA-1
Gene Sequence

>Msa0038920

ATGATGATGAAGAGCCACACATTCCTAAGGATCATTTTTCTTTTGATGTTTCTTGGATGGCTAACAGTTTGGATCTTGTTGCCCACAAAGGTCTACAAAAACACATGGACTCCCAAGCTAGAAATCAAGCTCAATTCTACATACTTCAGAGAGCAAGGGGTAAATATCCTGCTTTTCACATTCCCTATGATGTTCATTGGAGCTCTAGGTTGTGTTTATCTCCATCTTCATCGGGAAAAAATAACACAAAAGTTACCTTCCACAAGTACTGGGGCTCTTAAAAAATGTTTATGTTTCCTGAGACGTCCATTCCTGGTCATGCCTACAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGCAATCATGTTTGTTGCACTTTTGATATGGTCTCTTTACAATTACTTACGTACCAGTTTTGCTCACCTCCATATGCACAAAGAAGGCGAGAAAGTATGGGAAGCGAAGTTCAGGAGTGTATTTTTGAGACTAGGTTACATAGGAAACATATGTTGGGCATTTTTGTTCTTTCCAGTAACAAGAGGTTCTTCCATTCTACGTCTTGTTGGTCTCACATCTGAGTCAAGCATCAAATATCATATCTGGCTTGGGCAATTATCTATGGTTCTTTTTGCTGCACACACCATAGGTTTTTTCATATATTGGGGCATCACCAATCAAATGGTTGAGGCGTTAGAGTGGAGCAAGAGATATGTATCCAATGTAGCTGGAGAGATTGCAAGTTTAATAGCATTAGCCATGTGGATAACAAGCATTCCACGAATAAGGCGTAAGATGTATGAAGTATTTTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCCATCCATGTTGGAGTTGAATACATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCAGCTCGCCTTTTACCTTGTGATGCCCTTGAGCTCAACTTCTCCAAGGATCCTAGTTTATACTATAACCCCACAAGTTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACGGTGTCTTCTAGTTGTAATTTGGAGACGAACTATCTTAGTGTTACAATTAAAAATGTGGGAAGCTGGTCAAACAAGCTTTATCAAGAACTTTCTTCTTCATCTTTGGATCATCTTAATGTCTCGGTTGAAGGACCCTATGGACCACATTCTGCACAATTTCTAAGGCATGAGCAGATTGTGATGGTGAGTGGTGGAAGTGGCATAACTCCATTCATATCTATAATCCGTGATCTCATATTTCAAAGCCAACAACAAGAATTTCAACCTCCAAAACTCCTACTTGTTTGTATTTTCAAAAACTATGTTGACCTAACCATGTTAGATCTTATGCTTCCTGTTTCTGGTTCAACAACTCAAATCTCACAGCTTCCGTTACAAATCGAAGCTTACATCACAAGAGAAAAAGAAGAACCTTCAAGAGATACTCAGAAACAAATCCAAACTATATGGTTTAAAACAAACCTCTCAGATTCTCCTATCTCAGCTGTATTAGGCCCAAATAACTGGTTATGGCTTGGTGCTATAATTGCATCATCGTTCATCATGTTTCTCCTCCTTTTAGGAATTGTTACTCGTTACTATATTTATCCAATTGAAAATAACACAGGTGAAGTGTATAACTGGACTTCCAAAGTTATGTGGTACATGTTTCTACTATGTGCGTGTGTATGTATATGTTCTAGCGTTGTATTTCTTTGGTGTAAGAGACAGAACACTTTAGAAAATAAGCAAATAATGAATGTAGAAGTTCCAACACCAACAAGATCACCAGGGTCATGGATTTATGGTTCAGAAAGAGAGCTTGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCTACCAATGTACATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGTTTGAGTGTAAAGGCAAAGATGTTGGAGTTATGGTTTGTGGTCCAAGAAAATTGAGACACGAAGTTGCTAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAGTCCATCAGTTTTAATTGGTGA
Protein sequence

>Msa0038920

MMMKSHTFLRIIFLLMFLGWLTVWILLPTKVYKNTWTPKLEIKLNSTYFREQGVNILLFTFPMMFIGALGCVYLHLHREKITQKLPSTSTGALKKCLCFLRRPFLVMPTIGIVSAMELIFAIMFVALLIWSLYNYLRTSFAHLHMHKEGEKVWEAKFRSVFLRLGYIGNICWAFLFFPVTRGSSILRLVGLTSESSIKYHIWLGQLSMVLFAAHTIGFFIYWGITNQMVEALEWSKRYVSNVAGEIASLIALAMWITSIPRIRRKMYEVFFYTHHLYILYILFYAIHVGVEYMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARLLPCDALELNFSKDPSLYYNPTSLVFINVPKVSKLQWHPFTVSSSCNLETNYLSVTIKNVGSWSNKLYQELSSSSLDHLNVSVEGPYGPHSAQFLRHEQIVMVSGGSGITPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYVDLTMLDLMLPVSGSTTQISQLPLQIEAYITREKEEPSRDTQKQIQTIWFKTNLSDSPISAVLGPNNWLWLGAIIASSFIMFLLLLGIVTRYYIYPIENNTGEVYNWTSKVMWYMFLLCACVCICSSVVFLWCKRQNTLENKQIMNVEVPTPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFECKGKDVGVMVCGPRKLRHEVARICASGLADNLHFESISFNW*