AlfalfaGEDB | Msa0729350

M. sativa cultivar zhongmu-4 / Msa0729350

KEGG: -
GO: -
PFAM: PF06880.14

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0729350	XP_013452693.1	97.995	399	8	0	1	399	1	399	0.0	816

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0729350	A0A072UB96	97.995	399	8	0	1	399	1	399	0.0	816

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004480	Msa0729350	0.850468	1.665197e-60	-8.615850e-47
Msa0043480	Msa0729350	0.811850	5.696464e-51	-8.615850e-47
Msa0043630	Msa0729350	0.803331	3.669054e-49	-8.615850e-47
Msa0059900	Msa0729350	0.801512	8.696196e-49	-8.615850e-47
Msa0071470	Msa0729350	0.810045	1.401151e-50	-8.615850e-47
Msa0090380	Msa0729350	0.814729	1.328101e-51	-8.615850e-47
Msa0104810	Msa0729350	0.846654	1.896567e-59	-8.615850e-47
Msa0119430	Msa0729350	0.820610	6.263077e-53	-8.615850e-47
Msa0604570	Msa0729350	0.819857	9.315838e-53	-8.615850e-47
Msa0698450	Msa0729350	0.807672	4.507801e-50	-8.615850e-47
Msa0698460	Msa0729350	0.801640	8.184336e-49	-8.615850e-47
Msa0729350	Msa0734940	0.808232	3.427075e-50	-8.615850e-47
Msa0729350	Msa0769720	0.872695	2.609821e-67	-8.615850e-47
Msa0729350	Msa0807670	0.874184	8.234134e-68	-8.615850e-47
Msa0729350	Msa0807680	0.882929	6.897848e-71	-8.615850e-47
Msa0729350	Msa0816630	0.804394	2.206613e-49	-8.615850e-47
Msa0729350	Msa0848440	0.824923	6.203734e-54	-8.615850e-47
Msa0729350	Msa0945130	0.816477	5.421300e-52	-8.615850e-47
Msa0729350	Msa0968050	0.824684	7.065089e-54	-8.615850e-47
Msa0729350	Msa1016960	0.800427	1.448617e-48	-8.615850e-47
Msa0729350	Msa1025750	0.853409	2.435838e-61	-8.615850e-47
Msa0729350	Msa1028660	0.818274	2.135189e-52	-8.615850e-47
Msa0729350	Msa1064510	0.828437	8.997528e-55	-8.615850e-47
Msa0729350	Msa1068380	0.823148	1.618918e-53	-8.615850e-47
Msa0729350	Msa1089190	0.833814	4.296626e-56	-8.615850e-47
Msa0729350	Msa1109670	0.829770	4.273162e-55	-8.615850e-47
Msa0729350	Msa1113100	0.804421	2.177827e-49	-8.615850e-47
Msa0729350	Msa1121300	0.822911	1.838406e-53	-8.615850e-47
Msa0729350	Msa1153230	0.827854	1.243249e-54	-8.615850e-47
Msa0729350	Msa1156490	0.811917	5.507567e-51	-8.615850e-47
Msa0729350	Msa1165430	0.802458	5.557239e-49	-8.615850e-47
Msa0729350	Msa1184400	0.805307	1.422163e-49	-8.615850e-47
Msa0729350	Msa1212470	0.867305	1.509889e-65	-8.615850e-47
Msa0729350	Msa1218160	0.836034	1.185411e-56	-8.615850e-47
Msa0729350	Msa1225580	0.816823	4.534331e-52	-8.615850e-47
Msa0729350	Msa1246790	0.815021	1.144553e-51	-8.615850e-47
Msa0729350	Msa1286220	0.806979	6.322543e-50	-8.615850e-47
Msa0729350	Msa1299780	0.854961	8.681957e-62	-8.615850e-47
Msa0729350	Msa1329900	0.860795	1.609653e-63	-8.615850e-47
Msa0729350	Msa1355510	0.811206	7.862948e-51	-8.615850e-47
Msa0729350	Msa1364080	0.835831	1.334415e-56	-8.615850e-47
Msa0729350	Msa1369320	0.804308	2.299045e-49	-8.615850e-47
Msa0729350	Msa1370420	0.805741	1.152826e-49	-8.615850e-47
Msa0729350	Msa1389760	0.826962	2.034122e-54	-8.615850e-47
Msa0729350	Msa1402350	0.806810	6.864371e-50	-8.615850e-47
Msa0729350	Msa1420930	0.820564	6.416565e-53	-8.615850e-47
Msa0729350	Msa1422230	0.814650	1.382560e-51	-8.615850e-47
Msa0729350	Msa1433410	0.813124	3.000002e-51	-8.615850e-47
Msa0729350	Msa1435320	0.803227	3.855480e-49	-8.615850e-47
Msa0729350	Msa1443400	0.802110	6.553582e-49	-8.615850e-47
Msa0729350	Msa1443620	0.808182	3.512419e-50	-8.615850e-47
Msa0729350	Msa1448040	0.802373	5.785489e-49	-8.615850e-47
Msa0729350	Msa1452540	0.808210	3.464402e-50	-8.615850e-47
Msa0133100	Msa0729350	0.824073	9.831915e-54	-8.615850e-47
Msa0137860	Msa0729350	0.824048	9.965272e-54	-8.615850e-47
Msa0147790	Msa0729350	0.873064	1.964113e-67	-8.615850e-47
Msa0151170	Msa0729350	0.834167	3.505496e-56	-8.615850e-47
Msa0151220	Msa0729350	0.815685	8.143700e-52	-8.615850e-47
Msa0196880	Msa0729350	0.852507	4.412949e-61	-8.615850e-47
Msa0223140	Msa0729350	0.867835	1.020576e-65	-8.615850e-47
Msa0224130	Msa0729350	0.840497	8.390430e-58	-8.615850e-47
Msa0225840	Msa0729350	0.812025	5.217612e-51	-8.615850e-47
Msa0238710	Msa0729350	0.814475	1.511910e-51	-8.615850e-47
Msa0364790	Msa0729350	0.821028	5.019103e-53	-8.615850e-47
Msa0365950	Msa0729350	0.809206	2.121408e-50	-8.615850e-47
Msa0393100	Msa0729350	0.806866	6.680660e-50	-8.615850e-47
Msa0412260	Msa0729350	0.817915	2.573493e-52	-8.615850e-47
Msa0456770	Msa0729350	0.840491	8.420005e-58	-8.615850e-47
Msa0463490	Msa0729350	0.804493	2.104252e-49	-8.615850e-47
Msa0260530	Msa0729350	0.829097	6.229652e-55	-8.615850e-47
Msa0264500	Msa0729350	0.846909	1.615149e-59	-8.615850e-47
Msa0264680	Msa0729350	0.810581	1.073545e-50	-8.615850e-47
Msa0265270	Msa0729350	0.841152	5.650495e-58	-8.615850e-47
Msa0276430	Msa0729350	0.818600	1.801349e-52	-8.615850e-47
Msa0302510	Msa0729350	0.831185	1.926203e-55	-8.615850e-47
Msa0302730	Msa0729350	0.809379	1.948570e-50	-8.615850e-47
Msa0305620	Msa0729350	0.804096	2.544805e-49	-8.615850e-47
Msa0306310	Msa0729350	0.800437	1.441937e-48	-8.615850e-47
Msa0316470	Msa0729350	0.837575	4.794999e-57	-8.615850e-47
Msa0339720	Msa0729350	0.865826	4.454122e-65	-8.615850e-47
Msa0549140	Msa0729350	0.813343	2.686156e-51	-8.615850e-47
Msa0561360	Msa0729350	0.807946	3.942690e-50	-8.615850e-47
Msa0584580	Msa0729350	0.827320	1.669595e-54	-8.615850e-47
Msa0584600	Msa0729350	0.819301	1.247823e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0729350	MtrunA17_Chr0c01g0489311	97.995	399	8	0	1	399	1	399	0.0	816
Msa0729350	MtrunA17_Chr5g0414421	50.739	406	173	12	1	399	31	416	8.13e-130	379
Msa0729350	MtrunA17_Chr5g0414371	50.750	400	175	9	1	399	1	379	1.04e-127	372
Msa0729350	MtrunA17_Chr5g0414441	49.257	404	183	9	1	399	1	387	1.20e-124	365
Msa0729350	MtrunA17_Chr5g0414461	49.626	401	179	11	1	399	1	380	2.32e-120	354
Msa0729350	MtrunA17_Chr5g0414391	48.500	400	186	8	1	399	1	381	1.27e-119	352
Msa0729350	MtrunA17_Chr6g0456421	42.298	409	215	10	1	399	1	398	4.81e-102	308
Msa0729350	MtrunA17_Chr5g0414451	45.192	104	49	3	120	221	2	99	8.17e-16	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0729350	AT1G13480.1	43.781	402	208	9	1	399	1	387	9.70e-104	312
Msa0729350	AT1G13520.1	44.307	404	203	10	1	399	1	387	1.89e-102	309
Msa0729350	AT1G13530.1	45.050	404	198	10	1	399	1	385	1.21e-98	299
Msa0729350	AT1G13500.1	45.343	408	192	12	1	399	1	386	4.40e-93	285
Msa0729350	AT1G13470.1	44.913	403	193	14	1	399	1	378	5.42e-92	282
Msa0729350	AT1G13490.2	42.928	403	205	8	1	399	1	382	1.41e-91	281
Msa0729350	AT1G13540.1	40.931	408	205	14	1	399	1	381	1.85e-86	268
Msa0729350	AT1G13490.1	42.040	402	191	9	1	399	1	363	8.10e-86	265
Msa0729350	AT1G61600.1	38.605	430	224	11	1	399	1	421	6.66e-84	262
Msa0729350	AT1G13510.1	42.015	407	201	15	1	399	1	380	2.64e-83	259
Msa0729350	AT1G13550.1	39.604	404	217	9	1	396	1	385	5.75e-79	249

Find 99 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTACCAAAACACCAGAATT+AGG	0.174233	5_1:-36402642	None:intergenic
AGAATTTGAAGGGACTAATA+AGG	0.248217	5_1:+36404284	Msa0729350:CDS
AATAAGGGATGGAAGAAATT+TGG	0.251556	5_1:+36404300	Msa0729350:CDS
TCAAACACCATCATCAATTA+AGG	0.264161	5_1:+36404391	Msa0729350:CDS
GATAATAAAAGTAGAAGTTT+TGG	0.283238	5_1:-36404639	None:intergenic
TTGAAACCAACCTCTTGTTT+TGG	0.298830	5_1:+36402678	Msa0729350:CDS
AGGCCCTAATTCTGGTGTTT+TGG	0.301149	5_1:+36402638	Msa0729350:CDS
GAAAGGGTTGGGTGGCTTGG+TGG	0.314399	5_1:+36404228	Msa0729350:CDS
CAATCTCTGAAATATCAAAA+TGG	0.322872	5_1:-36404550	None:intergenic
GCTATGGTGAAATCGAATTC+TGG	0.330908	5_1:-36403841	None:intergenic
CCACCAGAAGGCCCTAATTC+TGG	0.330925	5_1:+36402630	Msa0729350:CDS
TTGTGTGATCTTTAATTAAG+AGG	0.337875	5_1:+36404486	Msa0729350:three_prime_UTR
GTCCATGAAAATGAAAATAA+TGG	0.337974	5_1:+36404436	Msa0729350:three_prime_UTR
CAGGAAAGGGTTGGGTGGCT+TGG	0.340457	5_1:+36404225	Msa0729350:CDS
CTGATATCTAAAGGATGAAT+TGG	0.361943	5_1:-36403619	None:intergenic
ACACCAGAATTAGGGCCTTC+TGG	0.363127	5_1:-36402633	None:intergenic
AGATTACACTAGAGCAGAAA+TGG	0.366742	5_1:+36403977	Msa0729350:CDS
ATCATCAATTAAGGAGCAAA+TGG	0.366805	5_1:+36404400	Msa0729350:CDS
GGGAGAGTACCATGAAGTTA+AGG	0.382423	5_1:+36402704	Msa0729350:CDS
TACTATGTCATACATCTTCA+TGG	0.383281	5_1:+36402855	Msa0729350:CDS
CCCTTCATGTTTATCAAAGA+AGG	0.391686	5_1:+36403907	Msa0729350:CDS
AAAGTGTTGTTGTGGGAAAA+TGG	0.398385	5_1:+36403878	Msa0729350:CDS
ACATCAAGTGATTCAAGTCT+TGG	0.402196	5_1:+36403778	Msa0729350:CDS
GGAGAGTACCATGAAGTTAA+GGG	0.402330	5_1:+36402705	Msa0729350:CDS
GTAGAAGCAAAGTTACATTA+AGG	0.416879	5_1:+36403674	Msa0729350:CDS
GAACAGTGTGGGGTTGAGTA+TGG	0.418107	5_1:+36404176	Msa0729350:CDS
TTACCAAAACACCAGAATTA+GGG	0.422217	5_1:-36402641	None:intergenic
AAAGAAGTGGTTGTAATTGC+TGG	0.422244	5_1:+36404072	Msa0729350:CDS
GCTAAATCTGTTGCTGAAGA+TGG	0.430828	5_1:+36403709	Msa0729350:CDS
GGAATTTCAAGTTAAGAAAG+TGG	0.435170	5_1:+36404260	Msa0729350:CDS
GAATGAAGTGGGAGCAGGAA+AGG	0.438164	5_1:+36404211	Msa0729350:CDS
AAGGCAAACCCTTAACTTCA+TGG	0.449187	5_1:-36402713	None:intergenic
AAGAAAGTGGAAGAATTTGA+AGG	0.451778	5_1:+36404273	Msa0729350:CDS
GATAATGATGATGGTAAAAC+GGG	0.466044	5_1:+36404018	Msa0729350:CDS
TTTAATAGTATCAATAATGT+TGG	0.466830	5_1:+36404147	Msa0729350:CDS
TGATAATGATGATGGTAAAA+CGG	0.470325	5_1:+36404017	Msa0729350:CDS
AGCAAATGGGAATGAATGTC+TGG	0.470727	5_1:+36404414	Msa0729350:exon
ATTTGCTCCTTAATTGATGA+TGG	0.471685	5_1:-36404398	None:intergenic
AGTGGGAGCAGGAAAGGGTT+GGG	0.473225	5_1:+36404217	Msa0729350:CDS
GACAATGGCTGATTAAGAAC+TGG	0.473764	5_1:-36402822	None:intergenic
GAAATCGAATTCTGGTTTCC+CGG	0.474718	5_1:-36403833	None:intergenic
AATGAAGTGGGAGCAGGAAA+GGG	0.477760	5_1:+36404212	Msa0729350:CDS
GATTTCTTGTACAAAGAAAG+AGG	0.479269	5_1:-36402585	None:intergenic
GAATTTGAAGGGACTAATAA+GGG	0.485288	5_1:+36404285	Msa0729350:CDS
AAGTGGGAGCAGGAAAGGGT+TGG	0.489416	5_1:+36404216	Msa0729350:CDS
TGCTGGGTGGGAAGCTATGA+TGG	0.490086	5_1:+36404089	Msa0729350:CDS
CTCTCATTGCCTCCACCAGA+AGG	0.490927	5_1:+36402618	Msa0729350:CDS
TATTTGTCACTGATATCTAA+AGG	0.492371	5_1:-36403628	None:intergenic
TCAAGTCTTGGAGAAGCATC+AGG	0.497137	5_1:+36403790	Msa0729350:CDS
AAAGGGTTGGGTGGCTTGGT+GGG	0.497328	5_1:+36404229	Msa0729350:CDS
TCCTTCTTTGATAAACATGA+AGG	0.498261	5_1:-36403908	None:intergenic
ATGTATGACATAGTATTGAT+TGG	0.499829	5_1:-36402847	None:intergenic
TGAAAGAATGAAGTGGGAGC+AGG	0.501403	5_1:+36404206	Msa0729350:CDS
CATCTTCATGGCAAGAAAAG+AGG	0.503885	5_1:+36402867	Msa0729350:CDS
TTCTGAACATCTGTTTGCTA+TGG	0.504829	5_1:-36403857	None:intergenic
TTTGTTATAAAGAGATTGGA+TGG	0.511821	5_1:+36404345	Msa0729350:CDS
GTGGCTTGGTGGGAAAGAAA+AGG	0.518123	5_1:+36404239	Msa0729350:CDS
GTAGATGATTCCCTCCGTGC+CGG	0.518251	5_1:+36403814	Msa0729350:CDS
TTTGTACAAGAAATCTGAAG+AGG	0.524129	5_1:+36402593	Msa0729350:CDS
TAGATGATTCCCTCCGTGCC+GGG	0.526204	5_1:+36403815	Msa0729350:CDS
CTGATTAAGAACTGGAATGA+AGG	0.530740	5_1:-36402814	None:intergenic
GAATTAGGGCCTTCTGGTGG+AGG	0.530798	5_1:-36402627	None:intergenic
TTCTGGTTTCCCGGCACGGA+GGG	0.530934	5_1:-36403824	None:intergenic
CGAATTCTGGTTTCCCGGCA+CGG	0.531178	5_1:-36403828	None:intergenic
TCATCAATTAAGGAGCAAAT+GGG	0.535072	5_1:+36404401	Msa0729350:CDS
AGCTATGATGGATAATAAGA+TGG	0.539308	5_1:+36404101	Msa0729350:CDS
TGAAAATGAAAATAATGGAT+AGG	0.543314	5_1:+36404441	Msa0729350:three_prime_UTR
GATTACACTAGAGCAGAAAT+GGG	0.553713	5_1:+36403978	Msa0729350:CDS
CCCAACCCAAAACAAGAGGT+TGG	0.558608	5_1:-36402684	None:intergenic
CTGATCTATAAAACAACTCA+AGG	0.565365	5_1:-36402752	None:intergenic
GAAATTTGGATGTTATGTCT+TGG	0.565754	5_1:+36404314	Msa0729350:CDS
ATCTTCATGGCAAGAAAAGA+GGG	0.569344	5_1:+36402868	Msa0729350:CDS
AGTGGTTGTAATTGCTGGGT+GGG	0.569655	5_1:+36404077	Msa0729350:CDS
TGTTCAGAAAGTGTTGTTGT+GGG	0.572278	5_1:+36403871	Msa0729350:CDS
GTTGGAGAAAAGAACAGTGT+GGG	0.575072	5_1:+36404165	Msa0729350:CDS
TAACTCAAAGGAGGAAGATG+TGG	0.576074	5_1:+36403561	Msa0729350:CDS
AGCAAAGTTACATTAAGGAG+TGG	0.577098	5_1:+36403679	Msa0729350:CDS
AGAAAGTGGAAGAATTTGAA+GGG	0.580351	5_1:+36404274	Msa0729350:CDS
TATGACATAGTATTGATTGG+AGG	0.584322	5_1:-36402844	None:intergenic
TTGAAGGGACTAATAAGGGA+TGG	0.589391	5_1:+36404289	Msa0729350:CDS
CCTTCTTTGATAAACATGAA+GGG	0.590946	5_1:-36403907	None:intergenic
CTGAAGATGGATACCCTCCA+AGG	0.601083	5_1:+36403722	Msa0729350:CDS
ATGTTCAGAAAGTGTTGTTG+TGG	0.614049	5_1:+36403870	Msa0729350:CDS
GGAAGCATACAATAACTCAA+AGG	0.617419	5_1:+36403549	Msa0729350:CDS
CTCTCCCAACCCAAAACAAG+AGG	0.619270	5_1:-36402688	None:intergenic
AAGAAGTGGTTGTAATTGCT+GGG	0.631620	5_1:+36404073	Msa0729350:CDS
TGTTGGAGAAAAGAACAGTG+TGG	0.632055	5_1:+36404164	Msa0729350:CDS
TATAGAATATGTATGTGACT+AGG	0.634027	5_1:+36402562	Msa0729350:exon
AGCATACAATAACTCAAAGG+AGG	0.645051	5_1:+36403552	Msa0729350:CDS
TAGTATTGATTGGAGGACAA+TGG	0.649023	5_1:-36402837	None:intergenic
CCAGAATTAGGGCCTTCTGG+TGG	0.656141	5_1:-36402630	None:intergenic
AATGTAACTTTGCTTCTACG+AGG	0.675300	5_1:-36403670	None:intergenic
GGGAGCAGGAAAGGGTTGGG+TGG	0.676775	5_1:+36404220	Msa0729350:CDS
AATTGTTGAAAGAATGAAGT+GGG	0.691351	5_1:+36404200	Msa0729350:CDS
AAGTGGTTGTAATTGCTGGG+TGG	0.699538	5_1:+36404076	Msa0729350:CDS
ATTCTGGTTTCCCGGCACGG+AGG	0.710825	5_1:-36403825	None:intergenic
TTGGAGAAAAGAACAGTGTG+GGG	0.720473	5_1:+36404166	Msa0729350:CDS
ATGATGGTGTTTGAAAGCAT+AGG	0.724364	5_1:-36404382	None:intergenic
CAATTGTTGAAAGAATGAAG+TGG	0.744511	5_1:+36404199	Msa0729350:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATAATAATTTCTTAACT+TGG	+	chr5_1:36402909-36402928	Msa0729350:intron	10.0%
!!	AAAATAATAATTTCTTAACT+TGG	+	chr5_1:36402909-36402928	Msa0729350:intron	10.0%
!!!	TCATGTCAAAAATTTAAAAT+TGG	-	chr5_1:36403467-36403486	None:intergenic	15.0%
!!	TTTAATAGTATCAATAATGT+TGG	+	chr5_1:36404147-36404166	Msa0729350:CDS	15.0%
!!!	TCATGTCAAAAATTTAAAAT+TGG	-	chr5_1:36403467-36403486	None:intergenic	15.0%
!!	TTTAATAGTATCAATAATGT+TGG	+	chr5_1:36404147-36404166	Msa0729350:CDS	15.0%
!!!	GACATTAATGTATTTTGATA+AGG	+	chr5_1:36403050-36403069	Msa0729350:intron	20.0%
!!!	TAAATTTTTCGTCTGTTATT+TGG	-	chr5_1:36403120-36403139	None:intergenic	20.0%
!!!	AATTTAAAATTGGTTCAACA+CGG	-	chr5_1:36403457-36403476	None:intergenic	20.0%
!!	AGTATTATACTGATGTAATT+TGG	+	chr5_1:36403512-36403531	Msa0729350:intron	20.0%
!!!	ATCCATTATTTTCATTTTCA+TGG	-	chr5_1:36404441-36404460	None:intergenic	20.0%
!!!	TGAAAATGAAAATAATGGAT+AGG	+	chr5_1:36404441-36404460	Msa0729350:three_prime_UTR	20.0%
!!!	GATAATAAAAGTAGAAGTTT+TGG	-	chr5_1:36404642-36404661	None:intergenic	20.0%
!!!	GACATTAATGTATTTTGATA+AGG	+	chr5_1:36403050-36403069	Msa0729350:intron	20.0%
!!!	TAAATTTTTCGTCTGTTATT+TGG	-	chr5_1:36403120-36403139	None:intergenic	20.0%
!!!	AATTTAAAATTGGTTCAACA+CGG	-	chr5_1:36403457-36403476	None:intergenic	20.0%
!!	AGTATTATACTGATGTAATT+TGG	+	chr5_1:36403512-36403531	Msa0729350:intron	20.0%
!!!	ATCCATTATTTTCATTTTCA+TGG	-	chr5_1:36404441-36404460	None:intergenic	20.0%
!!!	TGAAAATGAAAATAATGGAT+AGG	+	chr5_1:36404441-36404460	Msa0729350:three_prime_UTR	20.0%
!!!	GATAATAAAAGTAGAAGTTT+TGG	-	chr5_1:36404642-36404661	None:intergenic	20.0%
!	TATAGAATATGTATGTGACT+AGG	+	chr5_1:36402562-36402581	Msa0729350:exon	25.0%
!!!	ATGTATGACATAGTATTGAT+TGG	-	chr5_1:36402850-36402869	None:intergenic	25.0%
!	AGTACTATATAACTGACATT+TGG	-	chr5_1:36402967-36402986	None:intergenic	25.0%
!	ATGTCAGTTATATAGTACTA+CGG	+	chr5_1:36402968-36402987	Msa0729350:intron	25.0%
!!!	TTTTCTAGTATTGTAGCATA+AGG	+	chr5_1:36403232-36403251	Msa0729350:intron	25.0%
!!	TTTCTAGTATTGTAGCATAA+GGG	+	chr5_1:36403233-36403252	Msa0729350:intron	25.0%
!!!	TGTTAGTTTTGAATTCAAGT+TGG	+	chr5_1:36403371-36403390	Msa0729350:intron	25.0%
!!!	TAATTTGGTTTTTCTTCTGT+AGG	+	chr5_1:36403527-36403546	Msa0729350:intron	25.0%
!!!	AATTTGGTTTTTCTTCTGTA+GGG	+	chr5_1:36403528-36403547	Msa0729350:intron	25.0%
!	TATTTGTCACTGATATCTAA+AGG	-	chr5_1:36403631-36403650	None:intergenic	25.0%
!!!	TTTTCATGTGATAATGATGA+TGG	+	chr5_1:36404009-36404028	Msa0729350:CDS	25.0%
!!!	TGATAATGATGATGGTAAAA+CGG	+	chr5_1:36404017-36404036	Msa0729350:CDS	25.0%
!	AATTGTTGAAAGAATGAAGT+GGG	+	chr5_1:36404200-36404219	Msa0729350:CDS	25.0%
!!!	GACTTTTGTTATAAAGAGAT+TGG	+	chr5_1:36404341-36404360	Msa0729350:CDS	25.0%
!!	TTTGTTATAAAGAGATTGGA+TGG	+	chr5_1:36404345-36404364	Msa0729350:CDS	25.0%
!	GTCCATGAAAATGAAAATAA+TGG	+	chr5_1:36404436-36404455	Msa0729350:three_prime_UTR	25.0%
!	TTGTGTGATCTTTAATTAAG+AGG	+	chr5_1:36404486-36404505	Msa0729350:three_prime_UTR	25.0%
!!!	ATTCATTTTTACAGATTTGC+AGG	+	chr5_1:36404523-36404542	Msa0729350:three_prime_UTR	25.0%
!!!	TTCATTTTTACAGATTTGCA+GGG	+	chr5_1:36404524-36404543	Msa0729350:three_prime_UTR	25.0%
!!!	CAATCTCTGAAATATCAAAA+TGG	-	chr5_1:36404553-36404572	None:intergenic	25.0%
!	GCTTTATATTCAAGAATAAC+TGG	-	chr5_1:36402490-36402509	None:intergenic	25.0%
!	TATAGAATATGTATGTGACT+AGG	+	chr5_1:36402562-36402581	Msa0729350:exon	25.0%
!!!	ATGTATGACATAGTATTGAT+TGG	-	chr5_1:36402850-36402869	None:intergenic	25.0%
!	AGTACTATATAACTGACATT+TGG	-	chr5_1:36402967-36402986	None:intergenic	25.0%
!	ATGTCAGTTATATAGTACTA+CGG	+	chr5_1:36402968-36402987	Msa0729350:intron	25.0%
!!!	TTTTCTAGTATTGTAGCATA+AGG	+	chr5_1:36403232-36403251	Msa0729350:intron	25.0%
!!	TTTCTAGTATTGTAGCATAA+GGG	+	chr5_1:36403233-36403252	Msa0729350:intron	25.0%
!!!	TGTTAGTTTTGAATTCAAGT+TGG	+	chr5_1:36403371-36403390	Msa0729350:intron	25.0%
!!!	TAATTTGGTTTTTCTTCTGT+AGG	+	chr5_1:36403527-36403546	Msa0729350:intron	25.0%
!!!	AATTTGGTTTTTCTTCTGTA+GGG	+	chr5_1:36403528-36403547	Msa0729350:intron	25.0%
!	TATTTGTCACTGATATCTAA+AGG	-	chr5_1:36403631-36403650	None:intergenic	25.0%
!!!	TTTTCATGTGATAATGATGA+TGG	+	chr5_1:36404009-36404028	Msa0729350:CDS	25.0%
!!!	TGATAATGATGATGGTAAAA+CGG	+	chr5_1:36404017-36404036	Msa0729350:CDS	25.0%
!	AATTGTTGAAAGAATGAAGT+GGG	+	chr5_1:36404200-36404219	Msa0729350:CDS	25.0%
!!!	GACTTTTGTTATAAAGAGAT+TGG	+	chr5_1:36404341-36404360	Msa0729350:CDS	25.0%
!!	TTTGTTATAAAGAGATTGGA+TGG	+	chr5_1:36404345-36404364	Msa0729350:CDS	25.0%
!	GTCCATGAAAATGAAAATAA+TGG	+	chr5_1:36404436-36404455	Msa0729350:three_prime_UTR	25.0%
!	TTGTGTGATCTTTAATTAAG+AGG	+	chr5_1:36404486-36404505	Msa0729350:three_prime_UTR	25.0%
!!!	ATTCATTTTTACAGATTTGC+AGG	+	chr5_1:36404523-36404542	Msa0729350:three_prime_UTR	25.0%
!!!	TTCATTTTTACAGATTTGCA+GGG	+	chr5_1:36404524-36404543	Msa0729350:three_prime_UTR	25.0%
!!!	CAATCTCTGAAATATCAAAA+TGG	-	chr5_1:36404553-36404572	None:intergenic	25.0%
	GATTTCTTGTACAAAGAAAG+AGG	-	chr5_1:36402588-36402607	None:intergenic	30.0%
	TTTGTACAAGAAATCTGAAG+AGG	+	chr5_1:36402593-36402612	Msa0729350:CDS	30.0%
	TTACCAAAACACCAGAATTA+GGG	-	chr5_1:36402644-36402663	None:intergenic	30.0%
	ATTACCAAAACACCAGAATT+AGG	-	chr5_1:36402645-36402664	None:intergenic	30.0%
	CTGATCTATAAAACAACTCA+AGG	-	chr5_1:36402755-36402774	None:intergenic	30.0%
!!	CTTGAGTTGTTTTATAGATC+AGG	+	chr5_1:36402753-36402772	Msa0729350:CDS	30.0%
!!	TATGACATAGTATTGATTGG+AGG	-	chr5_1:36402847-36402866	None:intergenic	30.0%
	TACTATGTCATACATCTTCA+TGG	+	chr5_1:36402855-36402874	Msa0729350:CDS	30.0%
!	AAATAACGGGGAATATACTT+AGG	+	chr5_1:36403001-36403020	Msa0729350:intron	30.0%
	ACATTGAATTTCGATGACTT+TGG	+	chr5_1:36403026-36403045	Msa0729350:intron	30.0%
	AATACTTGAACATGTCAAGA+AGG	-	chr5_1:36403498-36403517	None:intergenic	30.0%
	CTGATATCTAAAGGATGAAT+TGG	-	chr5_1:36403622-36403641	None:intergenic	30.0%
	GTAGAAGCAAAGTTACATTA+AGG	+	chr5_1:36403674-36403693	Msa0729350:CDS	30.0%
	TTCTACTTAAAAACCTTGGA+GGG	-	chr5_1:36403738-36403757	None:intergenic	30.0%
	CCTTCTTTGATAAACATGAA+GGG	-	chr5_1:36403910-36403929	None:intergenic	30.0%
	TCCTTCTTTGATAAACATGA+AGG	-	chr5_1:36403911-36403930	None:intergenic	30.0%
!!	GATAATGATGATGGTAAAAC+GGG	+	chr5_1:36404018-36404037	Msa0729350:CDS	30.0%
!!	AGCTATGATGGATAATAAGA+TGG	+	chr5_1:36404101-36404120	Msa0729350:CDS	30.0%
!!!	ATGTAGCTGAAAGTTTTTTG+TGG	+	chr5_1:36404124-36404143	Msa0729350:CDS	30.0%
	CAATTGTTGAAAGAATGAAG+TGG	+	chr5_1:36404199-36404218	Msa0729350:CDS	30.0%
!!	GGAATTTCAAGTTAAGAAAG+TGG	+	chr5_1:36404260-36404279	Msa0729350:CDS	30.0%
	AAGAAAGTGGAAGAATTTGA+AGG	+	chr5_1:36404273-36404292	Msa0729350:CDS	30.0%
	AGAAAGTGGAAGAATTTGAA+GGG	+	chr5_1:36404274-36404293	Msa0729350:CDS	30.0%
	AGAATTTGAAGGGACTAATA+AGG	+	chr5_1:36404284-36404303	Msa0729350:CDS	30.0%
	GAATTTGAAGGGACTAATAA+GGG	+	chr5_1:36404285-36404304	Msa0729350:CDS	30.0%
	AATAAGGGATGGAAGAAATT+TGG	+	chr5_1:36404300-36404319	Msa0729350:CDS	30.0%
	GAAATTTGGATGTTATGTCT+TGG	+	chr5_1:36404314-36404333	Msa0729350:CDS	30.0%
	TCAAACACCATCATCAATTA+AGG	+	chr5_1:36404391-36404410	Msa0729350:CDS	30.0%
	ATTTGCTCCTTAATTGATGA+TGG	-	chr5_1:36404401-36404420	None:intergenic	30.0%
	ATCATCAATTAAGGAGCAAA+TGG	+	chr5_1:36404400-36404419	Msa0729350:CDS	30.0%
	TCATCAATTAAGGAGCAAAT+GGG	+	chr5_1:36404401-36404420	Msa0729350:CDS	30.0%
	GATTTCTTGTACAAAGAAAG+AGG	-	chr5_1:36402588-36402607	None:intergenic	30.0%
	TTTGTACAAGAAATCTGAAG+AGG	+	chr5_1:36402593-36402612	Msa0729350:CDS	30.0%
	TTACCAAAACACCAGAATTA+GGG	-	chr5_1:36402644-36402663	None:intergenic	30.0%
	ATTACCAAAACACCAGAATT+AGG	-	chr5_1:36402645-36402664	None:intergenic	30.0%
	CTGATCTATAAAACAACTCA+AGG	-	chr5_1:36402755-36402774	None:intergenic	30.0%
!!	CTTGAGTTGTTTTATAGATC+AGG	+	chr5_1:36402753-36402772	Msa0729350:CDS	30.0%
!!	TATGACATAGTATTGATTGG+AGG	-	chr5_1:36402847-36402866	None:intergenic	30.0%
	TACTATGTCATACATCTTCA+TGG	+	chr5_1:36402855-36402874	Msa0729350:CDS	30.0%
!	AAATAACGGGGAATATACTT+AGG	+	chr5_1:36403001-36403020	Msa0729350:intron	30.0%
	ACATTGAATTTCGATGACTT+TGG	+	chr5_1:36403026-36403045	Msa0729350:intron	30.0%
	AATACTTGAACATGTCAAGA+AGG	-	chr5_1:36403498-36403517	None:intergenic	30.0%
	CTGATATCTAAAGGATGAAT+TGG	-	chr5_1:36403622-36403641	None:intergenic	30.0%
	GTAGAAGCAAAGTTACATTA+AGG	+	chr5_1:36403674-36403693	Msa0729350:CDS	30.0%
	TTCTACTTAAAAACCTTGGA+GGG	-	chr5_1:36403738-36403757	None:intergenic	30.0%
	CCTTCTTTGATAAACATGAA+GGG	-	chr5_1:36403910-36403929	None:intergenic	30.0%
	TCCTTCTTTGATAAACATGA+AGG	-	chr5_1:36403911-36403930	None:intergenic	30.0%
!!	GATAATGATGATGGTAAAAC+GGG	+	chr5_1:36404018-36404037	Msa0729350:CDS	30.0%
!!	AGCTATGATGGATAATAAGA+TGG	+	chr5_1:36404101-36404120	Msa0729350:CDS	30.0%
!!!	ATGTAGCTGAAAGTTTTTTG+TGG	+	chr5_1:36404124-36404143	Msa0729350:CDS	30.0%
	CAATTGTTGAAAGAATGAAG+TGG	+	chr5_1:36404199-36404218	Msa0729350:CDS	30.0%
!!	GGAATTTCAAGTTAAGAAAG+TGG	+	chr5_1:36404260-36404279	Msa0729350:CDS	30.0%
	AAGAAAGTGGAAGAATTTGA+AGG	+	chr5_1:36404273-36404292	Msa0729350:CDS	30.0%
	AGAAAGTGGAAGAATTTGAA+GGG	+	chr5_1:36404274-36404293	Msa0729350:CDS	30.0%
	AGAATTTGAAGGGACTAATA+AGG	+	chr5_1:36404284-36404303	Msa0729350:CDS	30.0%
	GAATTTGAAGGGACTAATAA+GGG	+	chr5_1:36404285-36404304	Msa0729350:CDS	30.0%
	AATAAGGGATGGAAGAAATT+TGG	+	chr5_1:36404300-36404319	Msa0729350:CDS	30.0%
	GAAATTTGGATGTTATGTCT+TGG	+	chr5_1:36404314-36404333	Msa0729350:CDS	30.0%
	TCAAACACCATCATCAATTA+AGG	+	chr5_1:36404391-36404410	Msa0729350:CDS	30.0%
	ATTTGCTCCTTAATTGATGA+TGG	-	chr5_1:36404401-36404420	None:intergenic	30.0%
	ATCATCAATTAAGGAGCAAA+TGG	+	chr5_1:36404400-36404419	Msa0729350:CDS	30.0%
	TCATCAATTAAGGAGCAAAT+GGG	+	chr5_1:36404401-36404420	Msa0729350:CDS	30.0%
!!	TTGAAACCAACCTCTTGTTT+TGG	+	chr5_1:36402678-36402697	Msa0729350:CDS	35.0%
!!!	TGAAACCAACCTCTTGTTTT+GGG	+	chr5_1:36402679-36402698	Msa0729350:CDS	35.0%
!!	ACTCAAGGTTCATGTTTTGA+GGG	-	chr5_1:36402740-36402759	None:intergenic	35.0%
!	AACTCAAGGTTCATGTTTTG+AGG	-	chr5_1:36402741-36402760	None:intergenic	35.0%
	CTGATTAAGAACTGGAATGA+AGG	-	chr5_1:36402817-36402836	None:intergenic	35.0%
!!	TAGTATTGATTGGAGGACAA+TGG	-	chr5_1:36402840-36402859	None:intergenic	35.0%
	ATCTTCATGGCAAGAAAAGA+GGG	+	chr5_1:36402868-36402887	Msa0729350:CDS	35.0%
	TAACTGACATTTGGTTGAAC+TGG	-	chr5_1:36402958-36402977	None:intergenic	35.0%
	TTATATAGTACTACGGCGTA+AGG	+	chr5_1:36402975-36402994	Msa0729350:intron	35.0%
!	ACTTCAGTGACTTTGAGTTT+CGG	-	chr5_1:36403092-36403111	None:intergenic	35.0%
!	GGAAGCATACAATAACTCAA+AGG	+	chr5_1:36403549-36403568	Msa0729350:CDS	35.0%
	AGCATACAATAACTCAAAGG+AGG	+	chr5_1:36403552-36403571	Msa0729350:CDS	35.0%
	AATGTAACTTTGCTTCTACG+AGG	-	chr5_1:36403673-36403692	None:intergenic	35.0%
	AGCAAAGTTACATTAAGGAG+TGG	+	chr5_1:36403679-36403698	Msa0729350:CDS	35.0%
	CTTCTACTTAAAAACCTTGG+AGG	-	chr5_1:36403739-36403758	None:intergenic	35.0%
!!!	CTCCAAGGTTTTTAAGTAGA+AGG	+	chr5_1:36403737-36403756	Msa0729350:CDS	35.0%
	CACCTTCTACTTAAAAACCT+TGG	-	chr5_1:36403742-36403761	None:intergenic	35.0%
!!!	CAAGGTTTTTAAGTAGAAGG+TGG	+	chr5_1:36403740-36403759	Msa0729350:CDS	35.0%
	ACATCAAGTGATTCAAGTCT+TGG	+	chr5_1:36403778-36403797	Msa0729350:CDS	35.0%
!	TTCTGAACATCTGTTTGCTA+TGG	-	chr5_1:36403860-36403879	None:intergenic	35.0%
!!	ATGTTCAGAAAGTGTTGTTG+TGG	+	chr5_1:36403870-36403889	Msa0729350:CDS	35.0%
!!	TGTTCAGAAAGTGTTGTTGT+GGG	+	chr5_1:36403871-36403890	Msa0729350:CDS	35.0%
!!	AAAGTGTTGTTGTGGGAAAA+TGG	+	chr5_1:36403878-36403897	Msa0729350:CDS	35.0%
	CCCTTCATGTTTATCAAAGA+AGG	+	chr5_1:36403907-36403926	Msa0729350:CDS	35.0%
	AGATTACACTAGAGCAGAAA+TGG	+	chr5_1:36403977-36403996	Msa0729350:CDS	35.0%
	GATTACACTAGAGCAGAAAT+GGG	+	chr5_1:36403978-36403997	Msa0729350:CDS	35.0%
	TGCTGTTGTTCAAAAAGAAG+TGG	+	chr5_1:36404059-36404078	Msa0729350:CDS	35.0%
	AAAGAAGTGGTTGTAATTGC+TGG	+	chr5_1:36404072-36404091	Msa0729350:CDS	35.0%
	AAGAAGTGGTTGTAATTGCT+GGG	+	chr5_1:36404073-36404092	Msa0729350:CDS	35.0%
!	ATGATGGTGTTTGAAAGCAT+AGG	-	chr5_1:36404385-36404404	None:intergenic	35.0%
!!!	GTAGAAGTTTTGGTTTGCAT+GGG	-	chr5_1:36404632-36404651	None:intergenic	35.0%
!!!	AGTAGAAGTTTTGGTTTGCA+TGG	-	chr5_1:36404633-36404652	None:intergenic	35.0%
!!	TTGAAACCAACCTCTTGTTT+TGG	+	chr5_1:36402678-36402697	Msa0729350:CDS	35.0%
!!!	TGAAACCAACCTCTTGTTTT+GGG	+	chr5_1:36402679-36402698	Msa0729350:CDS	35.0%
!!	ACTCAAGGTTCATGTTTTGA+GGG	-	chr5_1:36402740-36402759	None:intergenic	35.0%
!	AACTCAAGGTTCATGTTTTG+AGG	-	chr5_1:36402741-36402760	None:intergenic	35.0%
	CTGATTAAGAACTGGAATGA+AGG	-	chr5_1:36402817-36402836	None:intergenic	35.0%
!!	TAGTATTGATTGGAGGACAA+TGG	-	chr5_1:36402840-36402859	None:intergenic	35.0%
	ATCTTCATGGCAAGAAAAGA+GGG	+	chr5_1:36402868-36402887	Msa0729350:CDS	35.0%
	TAACTGACATTTGGTTGAAC+TGG	-	chr5_1:36402958-36402977	None:intergenic	35.0%
	TTATATAGTACTACGGCGTA+AGG	+	chr5_1:36402975-36402994	Msa0729350:intron	35.0%
!	ACTTCAGTGACTTTGAGTTT+CGG	-	chr5_1:36403092-36403111	None:intergenic	35.0%
!	GGAAGCATACAATAACTCAA+AGG	+	chr5_1:36403549-36403568	Msa0729350:CDS	35.0%
	AGCATACAATAACTCAAAGG+AGG	+	chr5_1:36403552-36403571	Msa0729350:CDS	35.0%
	AATGTAACTTTGCTTCTACG+AGG	-	chr5_1:36403673-36403692	None:intergenic	35.0%
	AGCAAAGTTACATTAAGGAG+TGG	+	chr5_1:36403679-36403698	Msa0729350:CDS	35.0%
	CTTCTACTTAAAAACCTTGG+AGG	-	chr5_1:36403739-36403758	None:intergenic	35.0%
!!!	CTCCAAGGTTTTTAAGTAGA+AGG	+	chr5_1:36403737-36403756	Msa0729350:CDS	35.0%
	CACCTTCTACTTAAAAACCT+TGG	-	chr5_1:36403742-36403761	None:intergenic	35.0%
!!!	CAAGGTTTTTAAGTAGAAGG+TGG	+	chr5_1:36403740-36403759	Msa0729350:CDS	35.0%
	ACATCAAGTGATTCAAGTCT+TGG	+	chr5_1:36403778-36403797	Msa0729350:CDS	35.0%
!	TTCTGAACATCTGTTTGCTA+TGG	-	chr5_1:36403860-36403879	None:intergenic	35.0%
!!	ATGTTCAGAAAGTGTTGTTG+TGG	+	chr5_1:36403870-36403889	Msa0729350:CDS	35.0%
!!	TGTTCAGAAAGTGTTGTTGT+GGG	+	chr5_1:36403871-36403890	Msa0729350:CDS	35.0%
!!	AAAGTGTTGTTGTGGGAAAA+TGG	+	chr5_1:36403878-36403897	Msa0729350:CDS	35.0%
	CCCTTCATGTTTATCAAAGA+AGG	+	chr5_1:36403907-36403926	Msa0729350:CDS	35.0%
	AGATTACACTAGAGCAGAAA+TGG	+	chr5_1:36403977-36403996	Msa0729350:CDS	35.0%
	GATTACACTAGAGCAGAAAT+GGG	+	chr5_1:36403978-36403997	Msa0729350:CDS	35.0%
	TGCTGTTGTTCAAAAAGAAG+TGG	+	chr5_1:36404059-36404078	Msa0729350:CDS	35.0%
	AAAGAAGTGGTTGTAATTGC+TGG	+	chr5_1:36404072-36404091	Msa0729350:CDS	35.0%
	AAGAAGTGGTTGTAATTGCT+GGG	+	chr5_1:36404073-36404092	Msa0729350:CDS	35.0%
!	ATGATGGTGTTTGAAAGCAT+AGG	-	chr5_1:36404385-36404404	None:intergenic	35.0%
!!!	GTAGAAGTTTTGGTTTGCAT+GGG	-	chr5_1:36404632-36404651	None:intergenic	35.0%
!!!	AGTAGAAGTTTTGGTTTGCA+TGG	-	chr5_1:36404633-36404652	None:intergenic	35.0%
!!	GGAGAGTACCATGAAGTTAA+GGG	+	chr5_1:36402705-36402724	Msa0729350:CDS	40.0%
	AAGGCAAACCCTTAACTTCA+TGG	-	chr5_1:36402716-36402735	None:intergenic	40.0%
!!!	AGGTTCATGTTTTGAGGGAA+AGG	-	chr5_1:36402735-36402754	None:intergenic	40.0%
	GACAATGGCTGATTAAGAAC+TGG	-	chr5_1:36402825-36402844	None:intergenic	40.0%
	CATCTTCATGGCAAGAAAAG+AGG	+	chr5_1:36402867-36402886	Msa0729350:CDS	40.0%
	ACGGCGTAAGGTTGAAATAA+CGG	+	chr5_1:36402987-36403006	Msa0729350:intron	40.0%
	GAAACTCAAAGTCACTGAAG+TGG	+	chr5_1:36403091-36403110	Msa0729350:intron	40.0%
	TTAAACTCGATCGTCAAAGC+AGG	+	chr5_1:36403137-36403156	Msa0729350:intron	40.0%
	CTTAAGGGCGGAATTAAAGA+TGG	+	chr5_1:36403165-36403184	Msa0729350:intron	40.0%
	TCATGCACATGTACTCATCA+TGG	-	chr5_1:36403305-36403324	None:intergenic	40.0%
	TATCTCTATAACCCTGAACG+TGG	-	chr5_1:36403433-36403452	None:intergenic	40.0%
	TAACTCAAAGGAGGAAGATG+TGG	+	chr5_1:36403561-36403580	Msa0729350:CDS	40.0%
	GCTAAATCTGTTGCTGAAGA+TGG	+	chr5_1:36403709-36403728	Msa0729350:CDS	40.0%
!!	GAAATCGAATTCTGGTTTCC+CGG	-	chr5_1:36403836-36403855	None:intergenic	40.0%
	GCTATGGTGAAATCGAATTC+TGG	-	chr5_1:36403844-36403863	None:intergenic	40.0%
	TGTTGGAGAAAAGAACAGTG+TGG	+	chr5_1:36404164-36404183	Msa0729350:CDS	40.0%
	GTTGGAGAAAAGAACAGTGT+GGG	+	chr5_1:36404165-36404184	Msa0729350:CDS	40.0%
	TTGGAGAAAAGAACAGTGTG+GGG	+	chr5_1:36404166-36404185	Msa0729350:CDS	40.0%
	TTGAAGGGACTAATAAGGGA+TGG	+	chr5_1:36404289-36404308	Msa0729350:CDS	40.0%
	AGCAAATGGGAATGAATGTC+TGG	+	chr5_1:36404414-36404433	Msa0729350:exon	40.0%
!!	GGAGAGTACCATGAAGTTAA+GGG	+	chr5_1:36402705-36402724	Msa0729350:CDS	40.0%
	AAGGCAAACCCTTAACTTCA+TGG	-	chr5_1:36402716-36402735	None:intergenic	40.0%
!!!	AGGTTCATGTTTTGAGGGAA+AGG	-	chr5_1:36402735-36402754	None:intergenic	40.0%
	GACAATGGCTGATTAAGAAC+TGG	-	chr5_1:36402825-36402844	None:intergenic	40.0%
	CATCTTCATGGCAAGAAAAG+AGG	+	chr5_1:36402867-36402886	Msa0729350:CDS	40.0%
	ACGGCGTAAGGTTGAAATAA+CGG	+	chr5_1:36402987-36403006	Msa0729350:intron	40.0%
	GAAACTCAAAGTCACTGAAG+TGG	+	chr5_1:36403091-36403110	Msa0729350:intron	40.0%
	TTAAACTCGATCGTCAAAGC+AGG	+	chr5_1:36403137-36403156	Msa0729350:intron	40.0%
	CTTAAGGGCGGAATTAAAGA+TGG	+	chr5_1:36403165-36403184	Msa0729350:intron	40.0%
	TCATGCACATGTACTCATCA+TGG	-	chr5_1:36403305-36403324	None:intergenic	40.0%
	TATCTCTATAACCCTGAACG+TGG	-	chr5_1:36403433-36403452	None:intergenic	40.0%
	TAACTCAAAGGAGGAAGATG+TGG	+	chr5_1:36403561-36403580	Msa0729350:CDS	40.0%
	GCTAAATCTGTTGCTGAAGA+TGG	+	chr5_1:36403709-36403728	Msa0729350:CDS	40.0%
!!	GAAATCGAATTCTGGTTTCC+CGG	-	chr5_1:36403836-36403855	None:intergenic	40.0%
	GCTATGGTGAAATCGAATTC+TGG	-	chr5_1:36403844-36403863	None:intergenic	40.0%
	TGTTGGAGAAAAGAACAGTG+TGG	+	chr5_1:36404164-36404183	Msa0729350:CDS	40.0%
	GTTGGAGAAAAGAACAGTGT+GGG	+	chr5_1:36404165-36404184	Msa0729350:CDS	40.0%
	TTGGAGAAAAGAACAGTGTG+GGG	+	chr5_1:36404166-36404185	Msa0729350:CDS	40.0%
	TTGAAGGGACTAATAAGGGA+TGG	+	chr5_1:36404289-36404308	Msa0729350:CDS	40.0%
	AGCAAATGGGAATGAATGTC+TGG	+	chr5_1:36404414-36404433	Msa0729350:exon	40.0%
!	AGGCCCTAATTCTGGTGTTT+TGG	+	chr5_1:36402638-36402657	Msa0729350:CDS	45.0%
!!!	ACCAACCTCTTGTTTTGGGT+TGG	+	chr5_1:36402683-36402702	Msa0729350:CDS	45.0%
!!!	CCAACCTCTTGTTTTGGGTT+GGG	+	chr5_1:36402684-36402703	Msa0729350:CDS	45.0%
!!	GGGAGAGTACCATGAAGTTA+AGG	+	chr5_1:36402704-36402723	Msa0729350:CDS	45.0%
	CGGCGTAAGGTTGAAATAAC+GGG	+	chr5_1:36402988-36403007	Msa0729350:intron	45.0%
	GGCGTAAGGTTGAAATAACG+GGG	+	chr5_1:36402989-36403008	Msa0729350:intron	45.0%
	TCAAAGCAGGCGTCACTTAA+GGG	+	chr5_1:36403150-36403169	Msa0729350:intron	45.0%
!!	TCAAGTCTTGGAGAAGCATC+AGG	+	chr5_1:36403790-36403809	Msa0729350:CDS	45.0%
	AAGTGGTTGTAATTGCTGGG+TGG	+	chr5_1:36404076-36404095	Msa0729350:CDS	45.0%
	AGTGGTTGTAATTGCTGGGT+GGG	+	chr5_1:36404077-36404096	Msa0729350:CDS	45.0%
	TGAAAGAATGAAGTGGGAGC+AGG	+	chr5_1:36404206-36404225	Msa0729350:CDS	45.0%
	AATGAAGTGGGAGCAGGAAA+GGG	+	chr5_1:36404212-36404231	Msa0729350:CDS	45.0%
!	AGGCCCTAATTCTGGTGTTT+TGG	+	chr5_1:36402638-36402657	Msa0729350:CDS	45.0%
!!!	ACCAACCTCTTGTTTTGGGT+TGG	+	chr5_1:36402683-36402702	Msa0729350:CDS	45.0%
!!!	CCAACCTCTTGTTTTGGGTT+GGG	+	chr5_1:36402684-36402703	Msa0729350:CDS	45.0%
!!	GGGAGAGTACCATGAAGTTA+AGG	+	chr5_1:36402704-36402723	Msa0729350:CDS	45.0%
	CGGCGTAAGGTTGAAATAAC+GGG	+	chr5_1:36402988-36403007	Msa0729350:intron	45.0%
	GGCGTAAGGTTGAAATAACG+GGG	+	chr5_1:36402989-36403008	Msa0729350:intron	45.0%
	TCAAAGCAGGCGTCACTTAA+GGG	+	chr5_1:36403150-36403169	Msa0729350:intron	45.0%
!!	TCAAGTCTTGGAGAAGCATC+AGG	+	chr5_1:36403790-36403809	Msa0729350:CDS	45.0%
	AAGTGGTTGTAATTGCTGGG+TGG	+	chr5_1:36404076-36404095	Msa0729350:CDS	45.0%
	AGTGGTTGTAATTGCTGGGT+GGG	+	chr5_1:36404077-36404096	Msa0729350:CDS	45.0%
	TGAAAGAATGAAGTGGGAGC+AGG	+	chr5_1:36404206-36404225	Msa0729350:CDS	45.0%
	AATGAAGTGGGAGCAGGAAA+GGG	+	chr5_1:36404212-36404231	Msa0729350:CDS	45.0%
	ACACCAGAATTAGGGCCTTC+TGG	-	chr5_1:36402636-36402655	None:intergenic	50.0%
	CCCAACCCAAAACAAGAGGT+TGG	-	chr5_1:36402687-36402706	None:intergenic	50.0%
	CTCTCCCAACCCAAAACAAG+AGG	-	chr5_1:36402691-36402710	None:intergenic	50.0%
	GTCAAAGCAGGCGTCACTTA+AGG	+	chr5_1:36403149-36403168	Msa0729350:intron	50.0%
	GCATCGTGCAACAGAGTTAG+AGG	-	chr5_1:36403336-36403355	None:intergenic	50.0%
	AACTCTGTTGCACGATGCAG+CGG	+	chr5_1:36403338-36403357	Msa0729350:intron	50.0%
	CTGAAGATGGATACCCTCCA+AGG	+	chr5_1:36403722-36403741	Msa0729350:CDS	50.0%
	GAACAGTGTGGGGTTGAGTA+TGG	+	chr5_1:36404176-36404195	Msa0729350:CDS	50.0%
	GAATGAAGTGGGAGCAGGAA+AGG	+	chr5_1:36404211-36404230	Msa0729350:CDS	50.0%
!!	GTGGCTTGGTGGGAAAGAAA+AGG	+	chr5_1:36404239-36404258	Msa0729350:CDS	50.0%
	ACACCAGAATTAGGGCCTTC+TGG	-	chr5_1:36402636-36402655	None:intergenic	50.0%
	CCCAACCCAAAACAAGAGGT+TGG	-	chr5_1:36402687-36402706	None:intergenic	50.0%
	CTCTCCCAACCCAAAACAAG+AGG	-	chr5_1:36402691-36402710	None:intergenic	50.0%
	GTCAAAGCAGGCGTCACTTA+AGG	+	chr5_1:36403149-36403168	Msa0729350:intron	50.0%
	GCATCGTGCAACAGAGTTAG+AGG	-	chr5_1:36403336-36403355	None:intergenic	50.0%
	AACTCTGTTGCACGATGCAG+CGG	+	chr5_1:36403338-36403357	Msa0729350:intron	50.0%
	CTGAAGATGGATACCCTCCA+AGG	+	chr5_1:36403722-36403741	Msa0729350:CDS	50.0%
	GAACAGTGTGGGGTTGAGTA+TGG	+	chr5_1:36404176-36404195	Msa0729350:CDS	50.0%
	GAATGAAGTGGGAGCAGGAA+AGG	+	chr5_1:36404211-36404230	Msa0729350:CDS	50.0%
!!	GTGGCTTGGTGGGAAAGAAA+AGG	+	chr5_1:36404239-36404258	Msa0729350:CDS	50.0%
	CTCTCATTGCCTCCACCAGA+AGG	+	chr5_1:36402618-36402637	Msa0729350:CDS	55.0%
	GAATTAGGGCCTTCTGGTGG+AGG	-	chr5_1:36402630-36402649	None:intergenic	55.0%
	CCAGAATTAGGGCCTTCTGG+TGG	-	chr5_1:36402633-36402652	None:intergenic	55.0%
	CCACCAGAAGGCCCTAATTC+TGG	+	chr5_1:36402630-36402649	Msa0729350:CDS	55.0%
	AAGCAGGCGTCACTTAAGGG+CGG	+	chr5_1:36403153-36403172	Msa0729350:intron	55.0%
	GCAGCGACTGCTAGAACTGT+TGG	-	chr5_1:36403411-36403430	None:intergenic	55.0%
	GTAGATGATTCCCTCCGTGC+CGG	+	chr5_1:36403814-36403833	Msa0729350:CDS	55.0%
	TAGATGATTCCCTCCGTGCC+GGG	+	chr5_1:36403815-36403834	Msa0729350:CDS	55.0%
!!	CGAATTCTGGTTTCCCGGCA+CGG	-	chr5_1:36403831-36403850	None:intergenic	55.0%
	TGCTGGGTGGGAAGCTATGA+TGG	+	chr5_1:36404089-36404108	Msa0729350:CDS	55.0%
	AAGTGGGAGCAGGAAAGGGT+TGG	+	chr5_1:36404216-36404235	Msa0729350:CDS	55.0%
	AGTGGGAGCAGGAAAGGGTT+GGG	+	chr5_1:36404217-36404236	Msa0729350:CDS	55.0%
!!	AAAGGGTTGGGTGGCTTGGT+GGG	+	chr5_1:36404229-36404248	Msa0729350:CDS	55.0%
	CTCTCATTGCCTCCACCAGA+AGG	+	chr5_1:36402618-36402637	Msa0729350:CDS	55.0%
	GAATTAGGGCCTTCTGGTGG+AGG	-	chr5_1:36402630-36402649	None:intergenic	55.0%
	CCAGAATTAGGGCCTTCTGG+TGG	-	chr5_1:36402633-36402652	None:intergenic	55.0%
	CCACCAGAAGGCCCTAATTC+TGG	+	chr5_1:36402630-36402649	Msa0729350:CDS	55.0%
	AAGCAGGCGTCACTTAAGGG+CGG	+	chr5_1:36403153-36403172	Msa0729350:intron	55.0%
	GCAGCGACTGCTAGAACTGT+TGG	-	chr5_1:36403411-36403430	None:intergenic	55.0%
	GTAGATGATTCCCTCCGTGC+CGG	+	chr5_1:36403814-36403833	Msa0729350:CDS	55.0%
	TAGATGATTCCCTCCGTGCC+GGG	+	chr5_1:36403815-36403834	Msa0729350:CDS	55.0%
!!	CGAATTCTGGTTTCCCGGCA+CGG	-	chr5_1:36403831-36403850	None:intergenic	55.0%
	TGCTGGGTGGGAAGCTATGA+TGG	+	chr5_1:36404089-36404108	Msa0729350:CDS	55.0%
	AAGTGGGAGCAGGAAAGGGT+TGG	+	chr5_1:36404216-36404235	Msa0729350:CDS	55.0%
	AGTGGGAGCAGGAAAGGGTT+GGG	+	chr5_1:36404217-36404236	Msa0729350:CDS	55.0%
!!	AAAGGGTTGGGTGGCTTGGT+GGG	+	chr5_1:36404229-36404248	Msa0729350:CDS	55.0%
	TAGCAGTCGCTGCCACGTTC+AGG	+	chr5_1:36403418-36403437	Msa0729350:intron	60.0%
	AGCAGTCGCTGCCACGTTCA+GGG	+	chr5_1:36403419-36403438	Msa0729350:intron	60.0%
!!	TTCTGGTTTCCCGGCACGGA+GGG	-	chr5_1:36403827-36403846	None:intergenic	60.0%
!!	ATTCTGGTTTCCCGGCACGG+AGG	-	chr5_1:36403828-36403847	None:intergenic	60.0%
	CAGGAAAGGGTTGGGTGGCT+TGG	+	chr5_1:36404225-36404244	Msa0729350:CDS	60.0%
!	GAAAGGGTTGGGTGGCTTGG+TGG	+	chr5_1:36404228-36404247	Msa0729350:CDS	60.0%
	TAGCAGTCGCTGCCACGTTC+AGG	+	chr5_1:36403418-36403437	Msa0729350:intron	60.0%
	AGCAGTCGCTGCCACGTTCA+GGG	+	chr5_1:36403419-36403438	Msa0729350:intron	60.0%
!!	TTCTGGTTTCCCGGCACGGA+GGG	-	chr5_1:36403827-36403846	None:intergenic	60.0%
!!	ATTCTGGTTTCCCGGCACGG+AGG	-	chr5_1:36403828-36403847	None:intergenic	60.0%
	CAGGAAAGGGTTGGGTGGCT+TGG	+	chr5_1:36404225-36404244	Msa0729350:CDS	60.0%
!	GAAAGGGTTGGGTGGCTTGG+TGG	+	chr5_1:36404228-36404247	Msa0729350:CDS	60.0%
	GGGAGCAGGAAAGGGTTGGG+TGG	+	chr5_1:36404220-36404239	Msa0729350:CDS	65.0%
	GGGAGCAGGAAAGGGTTGGG+TGG	+	chr5_1:36404220-36404239	Msa0729350:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	36402489	36404693	36402489	ID=Msa0729350;Name=Msa0729350
chr5_1	mRNA	36402489	36404693	36402489	ID=Msa0729350-mRNA-1;Parent=Msa0729350;Name=Msa0729350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=81\|1\|1\|1\|1\|1\|2\|265\|399
chr5_1	exon	36402489	36402889	36402489	ID=Msa0729350-mRNA-1:exon:11123;Parent=Msa0729350-mRNA-1
chr5_1	exon	36403549	36404693	36403549	ID=Msa0729350-mRNA-1:exon:11124;Parent=Msa0729350-mRNA-1
chr5_1	five_prime_UTR	36402489	36402569	36402489	ID=Msa0729350-mRNA-1:five_prime_utr;Parent=Msa0729350-mRNA-1
chr5_1	CDS	36402570	36402889	36402570	ID=Msa0729350-mRNA-1:cds;Parent=Msa0729350-mRNA-1
chr5_1	CDS	36403549	36404428	36403549	ID=Msa0729350-mRNA-1:cds;Parent=Msa0729350-mRNA-1
chr5_1	three_prime_UTR	36404429	36404693	36404429	ID=Msa0729350-mRNA-1:three_prime_utr;Parent=Msa0729350-mRNA-1

Gene Sequence

>Msa0729350

ATGTATGTGACTAGGCCTCTTTCTTTGTACAAGAAATCTGAAGAGGCTCTCTCATTGCCTCCACCAGAAGGCCCTAATTCTGGTGTTTTGGTAATTCAAGATGATGATTTGAAACCAACCTCTTGTTTTGGGTTGGGAGAGTACCATGAAGTTAAGGGTTTGCCTTTCCCTCAAAACATGAACCTTGAGTTGTTTTATAGATCAGGCATTTCTCTTAACAGAACTACTCATAAACACAATGTTGCCTTCATTCCAGTTCTTAATCAGCCATTGTCCTCCAATCAATACTATGTCATACATCTTCATGGCAAGAAAAGAGGGGAAGCATACAATAACTCAAAGGAGGAAGATGTGGACACATTCTGTTTCTACAATTCTGTCTCTGAAGTACCAATTCATCCTTTAGATATCAGTGACAAATATCAAGAGTTCGAGATCTATCCTCGTAGAAGCAAAGTTACATTAAGGAGTGGTTTCTCAGCTAAATCTGTTGCTGAAGATGGATACCCTCCAAGGTTTTTAAGTAGAAGGTGGAAATTGAGTGCTTCAACATCAAGTGATTCAAGTCTTGGAGAAGCATCAGGTGTAGATGATTCCCTCCGTGCCGGGAAACCAGAATTCGATTTCACCATAGCAAACAGATGTTCAGAAAGTGTTGTTGTGGGAAAATGGTATTGTCCCTTCATGTTTATCAAAGAAGGAACTCACAGAACATTGAAAGAAGAAATGAGAAAATCAATGTTTTATGAGATTACACTAGAGCAGAAATGGGAACAAGTGTTTTCATGTGATAATGATGATGGTAAAACGGGAAACACTGTGAATGTTGATGCTGTTGTTCAAAAAGAAGTGGTTGTAATTGCTGGGTGGGAAGCTATGATGGATAATAAGATGGATGTAGCTGAAAGTTTTTTGTGGTTTAATAGTATCAATAATGTTGGAGAAAAGAACAGTGTGGGGTTGAGTATGGCAATTGTTGAAAGAATGAAGTGGGAGCAGGAAAGGGTTGGGTGGCTTGGTGGGAAAGAAAAGGAATTTCAAGTTAAGAAAGTGGAAGAATTTGAAGGGACTAATAAGGGATGGAAGAAATTTGGATGTTATGTCTTGGTTGAGACTTTTGTTATAAAGAGATTGGATGGAAGCATAGTATTGACCTATGCTTTCAAACACCATCATCAATTAAGGAGCAAATGGGAATGA

Protein sequence

>Msa0729350

MYVTRPLSLYKKSEEALSLPPPEGPNSGVLVIQDDDLKPTSCFGLGEYHEVKGLPFPQNMNLELFYRSGISLNRTTHKHNVAFIPVLNQPLSSNQYYVIHLHGKKRGEAYNNSKEEDVDTFCFYNSVSEVPIHPLDISDKYQEFEIYPRRSKVTLRSGFSAKSVAEDGYPPRFLSRRWKLSASTSSDSSLGEASGVDDSLRAGKPEFDFTIANRCSESVVVGKWYCPFMFIKEGTHRTLKEEMRKSMFYEITLEQKWEQVFSCDNDDGKTGNTVNVDAVVQKEVVVIAGWEAMMDNKMDVAESFLWFNSINNVGEKNSVGLSMAIVERMKWEQERVGWLGGKEKEFQVKKVEEFEGTNKGWKKFGCYVLVETFVIKRLDGSIVLTYAFKHHHQLRSKWE*