AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044060 MtrunA17_Chr1g0210651 87.850 107 6 1 84 183 1 107 1.05e-63 191
Msa0044060 MtrunA17_Chr1g0210621 86.916 107 7 1 84 183 1 107 7.71e-61 184
Msa0044060 MtrunA17_Chr7g0266481 50.943 106 46 1 84 183 1 106 2.77e-31 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044060 AT4G18590.1 55.660 106 41 1 84 183 1 106 1.83e-36 122
Msa0044060 AT3G52630.2 55.140 107 41 1 84 183 1 107 3.72e-35 119
Msa0044060 AT3G52630.1 55.140 107 41 1 84 183 1 107 3.72e-35 119

Find 57 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAATTATGTTGAGGTTAT+TGG 0.236766 1_1:-75529331 Msa0044060:CDS
ATGCAGAAGTCTGTTTCTTT+AGG 0.240072 1_1:-75528932 Msa0044060:exon
CATCTATGCAATCTCTAGTT+TGG 0.281812 1_1:-75528733 Msa0044060:three_prime_UTR
TGCAGAAGTCTGTTTCTTTA+GGG 0.290932 1_1:-75528931 Msa0044060:exon
TTAGGGAGCTTGAAGATTGC+TGG 0.305055 1_1:-75528914 Msa0044060:exon
CAAGTTCTTCCCAATTTCAT+TGG 0.308622 1_1:-75529469 Msa0044060:CDS
GGCTGTCTTCAGATCTAGTT+TGG 0.316035 1_1:+75531015 None:intergenic
GTCAGCTACTGGATGTTATT+AGG 0.318836 1_1:-75528891 Msa0044060:three_prime_UTR
CAATGAAATTGGGAAGAACT+TGG 0.319382 1_1:+75529470 None:intergenic
CAGCCGCCACTGCAAGCGTT+TGG 0.325100 1_1:+75531057 None:intergenic
TGCAAGCGTTTGGGAGGTTC+CGG 0.333677 1_1:+75531067 None:intergenic
AGCCGCCACTGCAAGCGTTT+GGG 0.366585 1_1:+75531058 None:intergenic
AAAAGTAAGAACAGTGGTTC+AGG 0.370182 1_1:-75529443 Msa0044060:CDS
GCTGGAGCTCTGGGTCTTGA+AGG 0.383682 1_1:-75530900 Msa0044060:intron
GAGGAGGCAAGCTGGAGCTC+TGG 0.385362 1_1:-75530910 Msa0044060:CDS
ACCGTATGAAATTGTTGTTT+CGG 0.397442 1_1:+75529932 None:intergenic
AAGATTGCTGGGTCAGCTAC+TGG 0.398877 1_1:-75528902 Msa0044060:three_prime_UTR
TGCATTCACCATTTGCTAGT+TGG 0.409283 1_1:+75528950 None:intergenic
ACTGACTTTGGTGCCACATT+TGG 0.420458 1_1:-75529268 Msa0044060:intron
GGAGGTTCCGGTTTGGTTGG+TGG 0.436638 1_1:+75531079 None:intergenic
TTCCGTTCGTGTCTGCTCTT+CGG 0.444827 1_1:+75530994 None:intergenic
TTCTGATGGTGCGGCAATCA+CGG 0.451155 1_1:-75529413 Msa0044060:CDS
CAGCAAAACGGCGATGGAGG+AGG 0.454408 1_1:-75530926 Msa0044060:CDS
GTTTGTTGTTGGTAAGTCTC+TGG 0.454743 1_1:+75530961 None:intergenic
GCTGAAATATTGACTGACTT+TGG 0.464534 1_1:-75529280 Msa0044060:CDS
TTGGGAGGTTCCGGTTTGGT+TGG 0.468707 1_1:+75531076 None:intergenic
CGGCGATGGAGGAGGCAAGC+TGG 0.469338 1_1:-75530918 Msa0044060:CDS
CTCAAAAGACGGCAGCAAAA+CGG 0.476957 1_1:-75530938 Msa0044060:CDS
TAGGGAGCTTGAAGATTGCT+GGG 0.492019 1_1:-75528913 Msa0044060:three_prime_UTR
CATGACACCACCAACCAAAC+CGG 0.492910 1_1:-75531086 Msa0044060:CDS
AGGAGGCAAGCTGGAGCTCT+GGG 0.495829 1_1:-75530909 Msa0044060:CDS
TCTGATGGTGCGGCAATCAC+GGG 0.498483 1_1:-75529412 Msa0044060:CDS
CTCCCAAACGCTTGCAGTGG+CGG 0.511182 1_1:-75531060 Msa0044060:CDS
GCGTTTGGGAGGTTCCGGTT+TGG 0.512076 1_1:+75531072 None:intergenic
CGGCAGCAAAACGGCGATGG+AGG 0.512955 1_1:-75530929 Msa0044060:CDS
CAGCTATGCCAACTAGCAAA+TGG 0.516075 1_1:-75528958 Msa0044060:CDS
ATTGCATAGATGTAAGTTCA+AGG 0.520489 1_1:+75528744 None:intergenic
CGCCACTGCAAGCGTTTGGG+AGG 0.532320 1_1:+75531061 None:intergenic
TCCTGTCATGAATTATGTTG+AGG 0.541918 1_1:-75529338 Msa0044060:CDS
AATGAAATTGGGAAGAACTT+GGG 0.544653 1_1:+75529471 None:intergenic
ACCTCAACATAATTCATGAC+AGG 0.550536 1_1:+75529337 None:intergenic
AGACGGCAGCAAAACGGCGA+TGG 0.552946 1_1:-75530932 Msa0044060:CDS
TGGGCATTGACAAATGCAGC+AGG 0.558969 1_1:+75529490 None:intergenic
AGCCGAAGAGCAGACACGAA+CGG 0.567009 1_1:-75530996 Msa0044060:CDS
GTATGAAATTGTTGTTTCGG+AGG 0.572114 1_1:+75529935 None:intergenic
TCCGAAACAACAATTTCATA+CGG 0.579280 1_1:-75529933 Msa0044060:intron
ATAGTGCTTCTTACCAAATG+TGG 0.600089 1_1:+75529255 None:intergenic
AACCTCCCAAACGCTTGCAG+TGG 0.604858 1_1:-75531063 Msa0044060:CDS
TGTTGTTGGTAAGTCTCTGG+CGG 0.617771 1_1:+75530964 None:intergenic
TTCTGCGAGGATCAGACATG+TGG 0.617829 1_1:-75528794 Msa0044060:three_prime_UTR
CAACAACAAACCTCAAAAGA+CGG 0.619004 1_1:-75530949 Msa0044060:CDS
TTGCATAGATGTAAGTTCAA+GGG 0.619501 1_1:+75528745 None:intergenic
GCAGACACGAACGGAAGTTG+AGG 0.620481 1_1:-75530987 Msa0044060:CDS
GGTGAATCATTCTGATGGTG+CGG 0.627683 1_1:-75529422 Msa0044060:CDS
ACGTATATGTTTATTCTGCG+AGG 0.641771 1_1:-75528807 Msa0044060:three_prime_UTR
AGTCAGTCAATATTTCAGCA+TGG 0.662550 1_1:+75529284 None:intergenic
GTTCAGGTGAATCATTCTGA+TGG 0.665709 1_1:-75529427 Msa0044060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGTAAATGTATGTTAA+TGG + chr1_1:75529120-75529139 None:intergenic 15.0%
!!! CATTACTAATCTTTTTTTTA+AGG - chr1_1:75529226-75529245 Msa0044060:intron 15.0%
!! ATAAGTGCATAAAAAAAAAA+GGG + chr1_1:75529984-75530003 None:intergenic 15.0%
!! ACTTATTATTATGAATGAAT+TGG - chr1_1:75530078-75530097 Msa0044060:intron 15.0%
!! CTTATTATTATGAATGAATT+GGG - chr1_1:75530079-75530098 Msa0044060:intron 15.0%
!!! TTTTTTTTTTTGAAAGGAAT+TGG - chr1_1:75530115-75530134 Msa0044060:intron 15.0%
!!! TTTTTTTTTTGAAAGGAATT+GGG - chr1_1:75530116-75530135 Msa0044060:intron 15.0%
!!! TGAATCTTTTTTTATATTGT+TGG - chr1_1:75530249-75530268 Msa0044060:intron 15.0%
!!! AGAAATTTAAAACACAAATT+AGG + chr1_1:75530756-75530775 None:intergenic 15.0%
!! AATAAGTAAATGTATGTTAA+TGG + chr1_1:75529120-75529139 None:intergenic 15.0%
!!! CATTACTAATCTTTTTTTTA+AGG - chr1_1:75529226-75529245 Msa0044060:intron 15.0%
!! ATAAGTGCATAAAAAAAAAA+GGG + chr1_1:75529984-75530003 None:intergenic 15.0%
!! ACTTATTATTATGAATGAAT+TGG - chr1_1:75530078-75530097 Msa0044060:intron 15.0%
!! CTTATTATTATGAATGAATT+GGG - chr1_1:75530079-75530098 Msa0044060:intron 15.0%
!!! TTTTTTTTTTTGAAAGGAAT+TGG - chr1_1:75530115-75530134 Msa0044060:intron 15.0%
!!! TTTTTTTTTTGAAAGGAATT+GGG - chr1_1:75530116-75530135 Msa0044060:intron 15.0%
!!! TGAATCTTTTTTTATATTGT+TGG - chr1_1:75530249-75530268 Msa0044060:intron 15.0%
!!! AGAAATTTAAAACACAAATT+AGG + chr1_1:75530756-75530775 None:intergenic 15.0%
!!! ATTAGTAATGTTGATTGTAA+TGG + chr1_1:75529216-75529235 None:intergenic 20.0%
!!! TAATCTTTTTTTTAAGGAGA+AGG - chr1_1:75529232-75529251 Msa0044060:intron 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG + chr1_1:75529595-75529614 None:intergenic 20.0%
!!! TCTACTTTATCTTACTATTT+TGG + chr1_1:75529658-75529677 None:intergenic 20.0%
!! AAGGTTATAAATAATAGAAG+CGG + chr1_1:75529757-75529776 None:intergenic 20.0%
!! TAAGTGCATAAAAAAAAAAG+GGG + chr1_1:75529983-75530002 None:intergenic 20.0%
!! GATAAGTGCATAAAAAAAAA+AGG + chr1_1:75529985-75530004 None:intergenic 20.0%
!!! ACTTTTTTTCCAATGAAATT+GGG + chr1_1:75530347-75530366 None:intergenic 20.0%
!!! TACTTTTTTTCCAATGAAAT+TGG + chr1_1:75530348-75530367 None:intergenic 20.0%
!! TTAAATCTCCAAATTAGAAT+AGG - chr1_1:75530726-75530745 Msa0044060:intron 20.0%
!!! ATTTCTTTTGTTACAATGTT+TGG - chr1_1:75530770-75530789 Msa0044060:intron 20.0%
!!! TACTTAAGTTGATTTTGATT+TGG - chr1_1:75530794-75530813 Msa0044060:intron 20.0%
!!! ATGTTTTAGCATTTTATGAT+AGG - chr1_1:75530965-75530984 Msa0044060:CDS 20.0%
!!! ATTAGTAATGTTGATTGTAA+TGG + chr1_1:75529216-75529235 None:intergenic 20.0%
!!! TAATCTTTTTTTTAAGGAGA+AGG - chr1_1:75529232-75529251 Msa0044060:intron 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG + chr1_1:75529595-75529614 None:intergenic 20.0%
!!! TCTACTTTATCTTACTATTT+TGG + chr1_1:75529658-75529677 None:intergenic 20.0%
!! AAGGTTATAAATAATAGAAG+CGG + chr1_1:75529757-75529776 None:intergenic 20.0%
!! TAAGTGCATAAAAAAAAAAG+GGG + chr1_1:75529983-75530002 None:intergenic 20.0%
!! GATAAGTGCATAAAAAAAAA+AGG + chr1_1:75529985-75530004 None:intergenic 20.0%
!!! ACTTTTTTTCCAATGAAATT+GGG + chr1_1:75530347-75530366 None:intergenic 20.0%
!!! TACTTTTTTTCCAATGAAAT+TGG + chr1_1:75530348-75530367 None:intergenic 20.0%
!! TTAAATCTCCAAATTAGAAT+AGG - chr1_1:75530726-75530745 Msa0044060:intron 20.0%
!!! ATTTCTTTTGTTACAATGTT+TGG - chr1_1:75530770-75530789 Msa0044060:intron 20.0%
!!! TACTTAAGTTGATTTTGATT+TGG - chr1_1:75530794-75530813 Msa0044060:intron 20.0%
!!! ATGTTTTAGCATTTTATGAT+AGG - chr1_1:75530965-75530984 Msa0044060:CDS 20.0%
!! GGTAAGATTTTATGAAATAG+TGG - chr1_1:75529296-75529315 Msa0044060:CDS 25.0%
!! CAAGACAATTTTTCTACTTT+TGG - chr1_1:75529358-75529377 Msa0044060:intron 25.0%
! TTACCTGGGTATTAAAAAAA+GGG + chr1_1:75529422-75529441 None:intergenic 25.0%
! TTTACCTGGGTATTAAAAAA+AGG + chr1_1:75529423-75529442 None:intergenic 25.0%
!!! CTCTCTTCTCATTTTTTTAT+TGG + chr1_1:75529608-75529627 None:intergenic 25.0%
!! ATCAATTTTGTTCTTTATGG+CGG + chr1_1:75529724-75529743 None:intergenic 25.0%
!! ACGATCAATTTTGTTCTTTA+TGG + chr1_1:75529727-75529746 None:intergenic 25.0%
! AGGTTATAAATAATAGAAGC+GGG + chr1_1:75529756-75529775 None:intergenic 25.0%
! ATAAAAAAAAAAGGGGAATC+TGG + chr1_1:75529976-75529995 None:intergenic 25.0%
!!! GAAACTTTTGTTTTAGATCT+TGG - chr1_1:75530155-75530174 Msa0044060:intron 25.0%
! TAATCAACTGAAATTTCTGA+TGG + chr1_1:75530200-75530219 None:intergenic 25.0%
! AATCTCAGATAACTGTAAAA+GGG - chr1_1:75530429-75530448 Msa0044060:intron 25.0%
! ATGAATTATGTTGAGGTTAT+TGG - chr1_1:75530473-75530492 Msa0044060:intron 25.0%
!!! TTTCTTACTTGTTTTCGTTA+TGG - chr1_1:75530590-75530609 Msa0044060:intron 25.0%
!! GGTAAGATTTTATGAAATAG+TGG - chr1_1:75529296-75529315 Msa0044060:CDS 25.0%
!! CAAGACAATTTTTCTACTTT+TGG - chr1_1:75529358-75529377 Msa0044060:intron 25.0%
! TTACCTGGGTATTAAAAAAA+GGG + chr1_1:75529422-75529441 None:intergenic 25.0%
! TTTACCTGGGTATTAAAAAA+AGG + chr1_1:75529423-75529442 None:intergenic 25.0%
!!! CTCTCTTCTCATTTTTTTAT+TGG + chr1_1:75529608-75529627 None:intergenic 25.0%
!! ATCAATTTTGTTCTTTATGG+CGG + chr1_1:75529724-75529743 None:intergenic 25.0%
!! ACGATCAATTTTGTTCTTTA+TGG + chr1_1:75529727-75529746 None:intergenic 25.0%
! AGGTTATAAATAATAGAAGC+GGG + chr1_1:75529756-75529775 None:intergenic 25.0%
! ATAAAAAAAAAAGGGGAATC+TGG + chr1_1:75529976-75529995 None:intergenic 25.0%
!!! GAAACTTTTGTTTTAGATCT+TGG - chr1_1:75530155-75530174 Msa0044060:intron 25.0%
! TAATCAACTGAAATTTCTGA+TGG + chr1_1:75530200-75530219 None:intergenic 25.0%
! AATCTCAGATAACTGTAAAA+GGG - chr1_1:75530429-75530448 Msa0044060:intron 25.0%
! ATGAATTATGTTGAGGTTAT+TGG - chr1_1:75530473-75530492 Msa0044060:intron 25.0%
!!! TTTCTTACTTGTTTTCGTTA+TGG - chr1_1:75530590-75530609 Msa0044060:intron 25.0%
!!! AGAGAACACTTATTTTGAGA+CGG + chr1_1:75529075-75529094 None:intergenic 30.0%
ATTGATTAAGCAGCTAAAAG+AGG - chr1_1:75529275-75529294 Msa0044060:CDS 30.0%
GTGCAAAAGTTGTACAAAAA+TGG + chr1_1:75529515-75529534 None:intergenic 30.0%
AAAACAATGGAGTGAGAAAA+AGG + chr1_1:75529582-75529601 None:intergenic 30.0%
AGATAAAGTAGATTTGCAGT+AGG - chr1_1:75529666-75529685 Msa0044060:intron 30.0%
GATAAAGTAGATTTGCAGTA+GGG - chr1_1:75529667-75529686 Msa0044060:intron 30.0%
! TCAATTTTGTTCTTTATGGC+GGG + chr1_1:75529723-75529742 None:intergenic 30.0%
! AATTACGCAAACGCATTTTA+GGG - chr1_1:75529805-75529824 Msa0044060:intron 30.0%
TCTTCCATTCATTCATTCTT+AGG - chr1_1:75529832-75529851 Msa0044060:intron 30.0%
CTTCCATTCATTCATTCTTA+GGG - chr1_1:75529833-75529852 Msa0044060:intron 30.0%
AAACCCTAAGAATGAATGAA+TGG + chr1_1:75529839-75529858 None:intergenic 30.0%
TCCGAAACAACAATTTCATA+CGG - chr1_1:75529871-75529890 Msa0044060:intron 30.0%
!! ACCGTATGAAATTGTTGTTT+CGG + chr1_1:75529875-75529894 None:intergenic 30.0%
ATCACTTGAAACAAAAGAGA+TGG + chr1_1:75529931-75529950 None:intergenic 30.0%
AATGAAATTGGGAAGAACTT+GGG + chr1_1:75530336-75530355 None:intergenic 30.0%
TGGAAAAAAAGTAAGAACAG+TGG - chr1_1:75530355-75530374 Msa0044060:intron 30.0%
GAATCTCAGATAACTGTAAA+AGG - chr1_1:75530428-75530447 Msa0044060:intron 30.0%
GAAAACTGTCACATAGTTAA+TGG - chr1_1:75530677-75530696 Msa0044060:intron 30.0%
TTGCATAGATGTAAGTTCAA+GGG + chr1_1:75531062-75531081 None:intergenic 30.0%
ATTGCATAGATGTAAGTTCA+AGG + chr1_1:75531063-75531082 None:intergenic 30.0%
!!! AGAGAACACTTATTTTGAGA+CGG + chr1_1:75529075-75529094 None:intergenic 30.0%
ATTGATTAAGCAGCTAAAAG+AGG - chr1_1:75529275-75529294 Msa0044060:CDS 30.0%
GTGCAAAAGTTGTACAAAAA+TGG + chr1_1:75529515-75529534 None:intergenic 30.0%
AAAACAATGGAGTGAGAAAA+AGG + chr1_1:75529582-75529601 None:intergenic 30.0%
AGATAAAGTAGATTTGCAGT+AGG - chr1_1:75529666-75529685 Msa0044060:intron 30.0%
GATAAAGTAGATTTGCAGTA+GGG - chr1_1:75529667-75529686 Msa0044060:intron 30.0%
! TCAATTTTGTTCTTTATGGC+GGG + chr1_1:75529723-75529742 None:intergenic 30.0%
! AATTACGCAAACGCATTTTA+GGG - chr1_1:75529805-75529824 Msa0044060:intron 30.0%
TCTTCCATTCATTCATTCTT+AGG - chr1_1:75529832-75529851 Msa0044060:intron 30.0%
CTTCCATTCATTCATTCTTA+GGG - chr1_1:75529833-75529852 Msa0044060:intron 30.0%
AAACCCTAAGAATGAATGAA+TGG + chr1_1:75529839-75529858 None:intergenic 30.0%
TCCGAAACAACAATTTCATA+CGG - chr1_1:75529871-75529890 Msa0044060:intron 30.0%
!! ACCGTATGAAATTGTTGTTT+CGG + chr1_1:75529875-75529894 None:intergenic 30.0%
ATCACTTGAAACAAAAGAGA+TGG + chr1_1:75529931-75529950 None:intergenic 30.0%
AATGAAATTGGGAAGAACTT+GGG + chr1_1:75530336-75530355 None:intergenic 30.0%
TGGAAAAAAAGTAAGAACAG+TGG - chr1_1:75530355-75530374 Msa0044060:intron 30.0%
GAATCTCAGATAACTGTAAA+AGG - chr1_1:75530428-75530447 Msa0044060:intron 30.0%
GAAAACTGTCACATAGTTAA+TGG - chr1_1:75530677-75530696 Msa0044060:intron 30.0%
TTGCATAGATGTAAGTTCAA+GGG + chr1_1:75531062-75531081 None:intergenic 30.0%
ATTGCATAGATGTAAGTTCA+AGG + chr1_1:75531063-75531082 None:intergenic 30.0%
CAACAACAAACCTCAAAAGA+CGG - chr1_1:75528855-75528874 Msa0044060:three_prime_UTR 35.0%
TTTGTGTAATCAAACTCCGA+CGG + chr1_1:75528999-75529018 None:intergenic 35.0%
GAGACGGATGAAGTATAATT+AGG + chr1_1:75529059-75529078 None:intergenic 35.0%
!!! AGACCCTTTTTTTAATACCC+AGG - chr1_1:75529416-75529435 Msa0044060:CDS 35.0%
TACCCAGGTAAAACTCAAAA+TGG - chr1_1:75529431-75529450 Msa0044060:CDS 35.0%
!!! GTCCATTTTGAGTTTTACCT+GGG + chr1_1:75529436-75529455 None:intergenic 35.0%
!!! TGTCCATTTTGAGTTTTACC+TGG + chr1_1:75529437-75529456 None:intergenic 35.0%
AATGGACACCTAGTTTAAGA+CGG - chr1_1:75529449-75529468 Msa0044060:CDS 35.0%
! TAGTTTAAGACGGAGCTAAA+CGG - chr1_1:75529459-75529478 Msa0044060:CDS 35.0%
CTAAAATGCGTTTGCGTAAT+TGG + chr1_1:75529806-75529825 None:intergenic 35.0%
! CAATTACGCAAACGCATTTT+AGG - chr1_1:75529804-75529823 Msa0044060:intron 35.0%
!! GTATGAAATTGTTGTTTCGG+AGG + chr1_1:75529872-75529891 None:intergenic 35.0%
AAAAAAAAAGGGGAATCTGG+TGG + chr1_1:75529973-75529992 None:intergenic 35.0%
TATGCGAAACAAAATCTGTG+AGG + chr1_1:75530023-75530042 None:intergenic 35.0%
TTCTACTCTGTTTCAGATCA+TGG - chr1_1:75530280-75530299 Msa0044060:intron 35.0%
CAATGAAATTGGGAAGAACT+TGG + chr1_1:75530337-75530356 None:intergenic 35.0%
CAAGTTCTTCCCAATTTCAT+TGG - chr1_1:75530335-75530354 Msa0044060:intron 35.0%
AAAAGTAAGAACAGTGGTTC+AGG - chr1_1:75530361-75530380 Msa0044060:intron 35.0%
ATAATTCATGACAGGAACCT+GGG + chr1_1:75530462-75530481 None:intergenic 35.0%
TCCTGTCATGAATTATGTTG+AGG - chr1_1:75530466-75530485 Msa0044060:intron 35.0%
ACCTCAACATAATTCATGAC+AGG + chr1_1:75530470-75530489 None:intergenic 35.0%
AGTCAGTCAATATTTCAGCA+TGG + chr1_1:75530523-75530542 None:intergenic 35.0%
! GCTGAAATATTGACTGACTT+TGG - chr1_1:75530524-75530543 Msa0044060:intron 35.0%
ATAGTGCTTCTTACCAAATG+TGG + chr1_1:75530552-75530571 None:intergenic 35.0%
TAGGAGAGCCTATTCTAATT+TGG + chr1_1:75530737-75530756 None:intergenic 35.0%
! ATGCAGAAGTCTGTTTCTTT+AGG - chr1_1:75530872-75530891 Msa0044060:intron 35.0%
! TGCAGAAGTCTGTTTCTTTA+GGG - chr1_1:75530873-75530892 Msa0044060:intron 35.0%
ACGTATATGTTTATTCTGCG+AGG - chr1_1:75530997-75531016 Msa0044060:CDS 35.0%
CATCTATGCAATCTCTAGTT+TGG - chr1_1:75531071-75531090 Msa0044060:CDS 35.0%
CAACAACAAACCTCAAAAGA+CGG - chr1_1:75528855-75528874 Msa0044060:three_prime_UTR 35.0%
TTTGTGTAATCAAACTCCGA+CGG + chr1_1:75528999-75529018 None:intergenic 35.0%
GAGACGGATGAAGTATAATT+AGG + chr1_1:75529059-75529078 None:intergenic 35.0%
!!! AGACCCTTTTTTTAATACCC+AGG - chr1_1:75529416-75529435 Msa0044060:CDS 35.0%
TACCCAGGTAAAACTCAAAA+TGG - chr1_1:75529431-75529450 Msa0044060:CDS 35.0%
!!! GTCCATTTTGAGTTTTACCT+GGG + chr1_1:75529436-75529455 None:intergenic 35.0%
!!! TGTCCATTTTGAGTTTTACC+TGG + chr1_1:75529437-75529456 None:intergenic 35.0%
AATGGACACCTAGTTTAAGA+CGG - chr1_1:75529449-75529468 Msa0044060:CDS 35.0%
! TAGTTTAAGACGGAGCTAAA+CGG - chr1_1:75529459-75529478 Msa0044060:CDS 35.0%
CTAAAATGCGTTTGCGTAAT+TGG + chr1_1:75529806-75529825 None:intergenic 35.0%
! CAATTACGCAAACGCATTTT+AGG - chr1_1:75529804-75529823 Msa0044060:intron 35.0%
!! GTATGAAATTGTTGTTTCGG+AGG + chr1_1:75529872-75529891 None:intergenic 35.0%
AAAAAAAAAGGGGAATCTGG+TGG + chr1_1:75529973-75529992 None:intergenic 35.0%
TATGCGAAACAAAATCTGTG+AGG + chr1_1:75530023-75530042 None:intergenic 35.0%
TTCTACTCTGTTTCAGATCA+TGG - chr1_1:75530280-75530299 Msa0044060:intron 35.0%
CAATGAAATTGGGAAGAACT+TGG + chr1_1:75530337-75530356 None:intergenic 35.0%
CAAGTTCTTCCCAATTTCAT+TGG - chr1_1:75530335-75530354 Msa0044060:intron 35.0%
AAAAGTAAGAACAGTGGTTC+AGG - chr1_1:75530361-75530380 Msa0044060:intron 35.0%
ATAATTCATGACAGGAACCT+GGG + chr1_1:75530462-75530481 None:intergenic 35.0%
TCCTGTCATGAATTATGTTG+AGG - chr1_1:75530466-75530485 Msa0044060:intron 35.0%
ACCTCAACATAATTCATGAC+AGG + chr1_1:75530470-75530489 None:intergenic 35.0%
AGTCAGTCAATATTTCAGCA+TGG + chr1_1:75530523-75530542 None:intergenic 35.0%
! GCTGAAATATTGACTGACTT+TGG - chr1_1:75530524-75530543 Msa0044060:intron 35.0%
ATAGTGCTTCTTACCAAATG+TGG + chr1_1:75530552-75530571 None:intergenic 35.0%
TAGGAGAGCCTATTCTAATT+TGG + chr1_1:75530737-75530756 None:intergenic 35.0%
! ATGCAGAAGTCTGTTTCTTT+AGG - chr1_1:75530872-75530891 Msa0044060:intron 35.0%
! TGCAGAAGTCTGTTTCTTTA+GGG - chr1_1:75530873-75530892 Msa0044060:intron 35.0%
ACGTATATGTTTATTCTGCG+AGG - chr1_1:75530997-75531016 Msa0044060:CDS 35.0%
CATCTATGCAATCTCTAGTT+TGG - chr1_1:75531071-75531090 Msa0044060:CDS 35.0%
!! GTTTGTTGTTGGTAAGTCTC+TGG + chr1_1:75528846-75528865 None:intergenic 40.0%
!!! CGTCTTTTGAGGTTTGTTGT+TGG + chr1_1:75528857-75528876 None:intergenic 40.0%
AACCGCCATCTTATTGAACA+AGG - chr1_1:75528952-75528971 Msa0044060:CDS 40.0%
GTCCTTGTTCAATAAGATGG+CGG + chr1_1:75528957-75528976 None:intergenic 40.0%
GCTGTCCTTGTTCAATAAGA+TGG + chr1_1:75528960-75528979 None:intergenic 40.0%
TAGCTGCTTAATCAATGCCT+CGG + chr1_1:75529271-75529290 None:intergenic 40.0%
TGGATTTCTTAACCAGTGAC+CGG - chr1_1:75529378-75529397 Msa0044060:intron 40.0%
! GTTTAGCTCCGTCTTAAACT+AGG + chr1_1:75529460-75529479 None:intergenic 40.0%
GATTTGCAGTAGGGAGAAAA+TGG - chr1_1:75529676-75529695 Msa0044060:intron 40.0%
GTTCAGGTGAATCATTCTGA+TGG - chr1_1:75530377-75530396 Msa0044060:intron 40.0%
TGTAAAAGGGTTATCATCCC+AGG - chr1_1:75530442-75530461 Msa0044060:intron 40.0%
CATAATTCATGACAGGAACC+TGG + chr1_1:75530463-75530482 None:intergenic 40.0%
! TGCATTCACCATTTGCTAGT+TGG + chr1_1:75530857-75530876 None:intergenic 40.0%
GTCAGCTACTGGATGTTATT+AGG - chr1_1:75530913-75530932 Msa0044060:CDS 40.0%
!! GTTTGTTGTTGGTAAGTCTC+TGG + chr1_1:75528846-75528865 None:intergenic 40.0%
!!! CGTCTTTTGAGGTTTGTTGT+TGG + chr1_1:75528857-75528876 None:intergenic 40.0%
AACCGCCATCTTATTGAACA+AGG - chr1_1:75528952-75528971 Msa0044060:CDS 40.0%
GTCCTTGTTCAATAAGATGG+CGG + chr1_1:75528957-75528976 None:intergenic 40.0%
GCTGTCCTTGTTCAATAAGA+TGG + chr1_1:75528960-75528979 None:intergenic 40.0%
TAGCTGCTTAATCAATGCCT+CGG + chr1_1:75529271-75529290 None:intergenic 40.0%
TGGATTTCTTAACCAGTGAC+CGG - chr1_1:75529378-75529397 Msa0044060:intron 40.0%
! GTTTAGCTCCGTCTTAAACT+AGG + chr1_1:75529460-75529479 None:intergenic 40.0%
GATTTGCAGTAGGGAGAAAA+TGG - chr1_1:75529676-75529695 Msa0044060:intron 40.0%
GTTCAGGTGAATCATTCTGA+TGG - chr1_1:75530377-75530396 Msa0044060:intron 40.0%
TGTAAAAGGGTTATCATCCC+AGG - chr1_1:75530442-75530461 Msa0044060:intron 40.0%
CATAATTCATGACAGGAACC+TGG + chr1_1:75530463-75530482 None:intergenic 40.0%
! TGCATTCACCATTTGCTAGT+TGG + chr1_1:75530857-75530876 None:intergenic 40.0%
GTCAGCTACTGGATGTTATT+AGG - chr1_1:75530913-75530932 Msa0044060:CDS 40.0%
GGCTGTCTTCAGATCTAGTT+TGG + chr1_1:75528792-75528811 None:intergenic 45.0%
! TGTTGTTGGTAAGTCTCTGG+CGG + chr1_1:75528843-75528862 None:intergenic 45.0%
CTCAAAAGACGGCAGCAAAA+CGG - chr1_1:75528866-75528885 Msa0044060:three_prime_UTR 45.0%
TTGAAGGTGGAGACTAGGAA+CGG - chr1_1:75528920-75528939 Msa0044060:exon 45.0%
TTGAACAAGGACAGCCACAA+CGG - chr1_1:75528965-75528984 Msa0044060:CDS 45.0%
AGCTGCTTAATCAATGCCTC+GGG + chr1_1:75529270-75529289 None:intergenic 45.0%
GGATTTCTTAACCAGTGACC+GGG - chr1_1:75529379-75529398 Msa0044060:intron 45.0%
GATTTCTTAACCAGTGACCG+GGG - chr1_1:75529380-75529399 Msa0044060:intron 45.0%
ATTTCTTAACCAGTGACCGG+GGG - chr1_1:75529381-75529400 Msa0044060:intron 45.0%
! GGTGAATCATTCTGATGGTG+CGG - chr1_1:75530382-75530401 Msa0044060:intron 45.0%
!! ACTGACTTTGGTGCCACATT+TGG - chr1_1:75530536-75530555 Msa0044060:intron 45.0%
CAGCTATGCCAACTAGCAAA+TGG - chr1_1:75530846-75530865 Msa0044060:intron 45.0%
TTAGGGAGCTTGAAGATTGC+TGG - chr1_1:75530890-75530909 Msa0044060:intron 45.0%
TAGGGAGCTTGAAGATTGCT+GGG - chr1_1:75530891-75530910 Msa0044060:intron 45.0%
GGCTGTCTTCAGATCTAGTT+TGG + chr1_1:75528792-75528811 None:intergenic 45.0%
! TGTTGTTGGTAAGTCTCTGG+CGG + chr1_1:75528843-75528862 None:intergenic 45.0%
CTCAAAAGACGGCAGCAAAA+CGG - chr1_1:75528866-75528885 Msa0044060:three_prime_UTR 45.0%
TTGAAGGTGGAGACTAGGAA+CGG - chr1_1:75528920-75528939 Msa0044060:exon 45.0%
TTGAACAAGGACAGCCACAA+CGG - chr1_1:75528965-75528984 Msa0044060:CDS 45.0%
AGCTGCTTAATCAATGCCTC+GGG + chr1_1:75529270-75529289 None:intergenic 45.0%
GGATTTCTTAACCAGTGACC+GGG - chr1_1:75529379-75529398 Msa0044060:intron 45.0%
GATTTCTTAACCAGTGACCG+GGG - chr1_1:75529380-75529399 Msa0044060:intron 45.0%
ATTTCTTAACCAGTGACCGG+GGG - chr1_1:75529381-75529400 Msa0044060:intron 45.0%
! GGTGAATCATTCTGATGGTG+CGG - chr1_1:75530382-75530401 Msa0044060:intron 45.0%
!! ACTGACTTTGGTGCCACATT+TGG - chr1_1:75530536-75530555 Msa0044060:intron 45.0%
CAGCTATGCCAACTAGCAAA+TGG - chr1_1:75530846-75530865 Msa0044060:intron 45.0%
TTAGGGAGCTTGAAGATTGC+TGG - chr1_1:75530890-75530909 Msa0044060:intron 45.0%
TAGGGAGCTTGAAGATTGCT+GGG - chr1_1:75530891-75530910 Msa0044060:intron 45.0%
!! TCAAAATAAAAATAAAAAAA+AGG + chr1_1:75530059-75530078 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - chr1_1:75530109-75530128 Msa0044060:intron 5.0%
!! TCAAAATAAAAATAAAAAAA+AGG + chr1_1:75530059-75530078 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - chr1_1:75530109-75530128 Msa0044060:intron 5.0%
TTCCGTTCGTGTCTGCTCTT+CGG + chr1_1:75528813-75528832 None:intergenic 50.0%
! CGTTTTGCTGCCGTCTTTTG+AGG + chr1_1:75528868-75528887 None:intergenic 50.0%
CTGCTTAATCAATGCCTCGG+GGG + chr1_1:75529268-75529287 None:intergenic 50.0%
GCTGCTTAATCAATGCCTCG+GGG + chr1_1:75529269-75529288 None:intergenic 50.0%
!! TGGGCATTGACAAATGCAGC+AGG + chr1_1:75530317-75530336 None:intergenic 50.0%
! TTCTGATGGTGCGGCAATCA+CGG - chr1_1:75530391-75530410 Msa0044060:intron 50.0%
AAGATTGCTGGGTCAGCTAC+TGG - chr1_1:75530902-75530921 Msa0044060:CDS 50.0%
TTCTGCGAGGATCAGACATG+TGG - chr1_1:75531010-75531029 Msa0044060:CDS 50.0%
TTCCGTTCGTGTCTGCTCTT+CGG + chr1_1:75528813-75528832 None:intergenic 50.0%
! CGTTTTGCTGCCGTCTTTTG+AGG + chr1_1:75528868-75528887 None:intergenic 50.0%
CTGCTTAATCAATGCCTCGG+GGG + chr1_1:75529268-75529287 None:intergenic 50.0%
GCTGCTTAATCAATGCCTCG+GGG + chr1_1:75529269-75529288 None:intergenic 50.0%
!! TGGGCATTGACAAATGCAGC+AGG + chr1_1:75530317-75530336 None:intergenic 50.0%
! TTCTGATGGTGCGGCAATCA+CGG - chr1_1:75530391-75530410 Msa0044060:intron 50.0%
AAGATTGCTGGGTCAGCTAC+TGG - chr1_1:75530902-75530921 Msa0044060:CDS 50.0%
TTCTGCGAGGATCAGACATG+TGG - chr1_1:75531010-75531029 Msa0044060:CDS 50.0%
!! TTGGGAGGTTCCGGTTTGGT+TGG + chr1_1:75528731-75528750 None:intergenic 55.0%
TGCAAGCGTTTGGGAGGTTC+CGG + chr1_1:75528740-75528759 None:intergenic 55.0%
AACCTCCCAAACGCTTGCAG+TGG - chr1_1:75528741-75528760 Msa0044060:three_prime_UTR 55.0%
AGCCGAAGAGCAGACACGAA+CGG - chr1_1:75528808-75528827 Msa0044060:three_prime_UTR 55.0%
GCAGACACGAACGGAAGTTG+AGG - chr1_1:75528817-75528836 Msa0044060:three_prime_UTR 55.0%
GGGTCTTGAAGGTGGAGACT+AGG - chr1_1:75528915-75528934 Msa0044060:exon 55.0%
AAGGTGGAGACTAGGAACGG+AGG - chr1_1:75528923-75528942 Msa0044060:exon 55.0%
AACAAGGACAGCCACAACGG+CGG - chr1_1:75528968-75528987 Msa0044060:CDS 55.0%
! GTCTTGTTAACCAGTGCCCC+CGG + chr1_1:75529400-75529419 None:intergenic 55.0%
!! AGAGCGCTGCAACACGGAAA+AGG + chr1_1:75529776-75529795 None:intergenic 55.0%
!! GTTGAGAGAGCGCTGCAACA+CGG + chr1_1:75529782-75529801 None:intergenic 55.0%
! TCTGATGGTGCGGCAATCAC+GGG - chr1_1:75530392-75530411 Msa0044060:intron 55.0%
!! CGGTTTGGTTGGTGGTGTCA+TGG + chr1_1:75528720-75528739 None:intergenic 55.0%
!! TTGGGAGGTTCCGGTTTGGT+TGG + chr1_1:75528731-75528750 None:intergenic 55.0%
TGCAAGCGTTTGGGAGGTTC+CGG + chr1_1:75528740-75528759 None:intergenic 55.0%
AACCTCCCAAACGCTTGCAG+TGG - chr1_1:75528741-75528760 Msa0044060:three_prime_UTR 55.0%
AGCCGAAGAGCAGACACGAA+CGG - chr1_1:75528808-75528827 Msa0044060:three_prime_UTR 55.0%
GCAGACACGAACGGAAGTTG+AGG - chr1_1:75528817-75528836 Msa0044060:three_prime_UTR 55.0%
GGGTCTTGAAGGTGGAGACT+AGG - chr1_1:75528915-75528934 Msa0044060:exon 55.0%
AAGGTGGAGACTAGGAACGG+AGG - chr1_1:75528923-75528942 Msa0044060:exon 55.0%
AACAAGGACAGCCACAACGG+CGG - chr1_1:75528968-75528987 Msa0044060:CDS 55.0%
! GTCTTGTTAACCAGTGCCCC+CGG + chr1_1:75529400-75529419 None:intergenic 55.0%
!! AGAGCGCTGCAACACGGAAA+AGG + chr1_1:75529776-75529795 None:intergenic 55.0%
!! GTTGAGAGAGCGCTGCAACA+CGG + chr1_1:75529782-75529801 None:intergenic 55.0%
! TCTGATGGTGCGGCAATCAC+GGG - chr1_1:75530392-75530411 Msa0044060:intron 55.0%
!! GGAGGTTCCGGTTTGGTTGG+TGG + chr1_1:75528728-75528747 None:intergenic 60.0%
GCGTTTGGGAGGTTCCGGTT+TGG + chr1_1:75528735-75528754 None:intergenic 60.0%
CTCCCAAACGCTTGCAGTGG+CGG - chr1_1:75528744-75528763 Msa0044060:three_prime_UTR 60.0%
AGCCGCCACTGCAAGCGTTT+GGG + chr1_1:75528749-75528768 None:intergenic 60.0%
AGACGGCAGCAAAACGGCGA+TGG - chr1_1:75528872-75528891 Msa0044060:three_prime_UTR 60.0%
CAGCAAAACGGCGATGGAGG+AGG - chr1_1:75528878-75528897 Msa0044060:three_prime_UTR 60.0%
AGGAGGCAAGCTGGAGCTCT+GGG - chr1_1:75528895-75528914 Msa0044060:three_prime_UTR 60.0%
!! GCTGGAGCTCTGGGTCTTGA+AGG - chr1_1:75528904-75528923 Msa0044060:three_prime_UTR 60.0%
!! GGAGCTCTGGGTCTTGAAGG+TGG - chr1_1:75528907-75528926 Msa0044060:three_prime_UTR 60.0%
AAGGTTAACCAGTGCCCCCG+AGG - chr1_1:75529251-75529270 Msa0044060:intron 60.0%
! AATCAATGCCTCGGGGGCAC+TGG + chr1_1:75529262-75529281 None:intergenic 60.0%
!! GGAGGTTCCGGTTTGGTTGG+TGG + chr1_1:75528728-75528747 None:intergenic 60.0%
GCGTTTGGGAGGTTCCGGTT+TGG + chr1_1:75528735-75528754 None:intergenic 60.0%
CTCCCAAACGCTTGCAGTGG+CGG - chr1_1:75528744-75528763 Msa0044060:three_prime_UTR 60.0%
AGCCGCCACTGCAAGCGTTT+GGG + chr1_1:75528749-75528768 None:intergenic 60.0%
AGACGGCAGCAAAACGGCGA+TGG - chr1_1:75528872-75528891 Msa0044060:three_prime_UTR 60.0%
CAGCAAAACGGCGATGGAGG+AGG - chr1_1:75528878-75528897 Msa0044060:three_prime_UTR 60.0%
AGGAGGCAAGCTGGAGCTCT+GGG - chr1_1:75528895-75528914 Msa0044060:three_prime_UTR 60.0%
!! GCTGGAGCTCTGGGTCTTGA+AGG - chr1_1:75528904-75528923 Msa0044060:three_prime_UTR 60.0%
!! GGAGCTCTGGGTCTTGAAGG+TGG - chr1_1:75528907-75528926 Msa0044060:three_prime_UTR 60.0%
AAGGTTAACCAGTGCCCCCG+AGG - chr1_1:75529251-75529270 Msa0044060:intron 60.0%
! AATCAATGCCTCGGGGGCAC+TGG + chr1_1:75529262-75529281 None:intergenic 60.0%
CGCCACTGCAAGCGTTTGGG+AGG + chr1_1:75528746-75528765 None:intergenic 65.0%
CAGCCGCCACTGCAAGCGTT+TGG + chr1_1:75528750-75528769 None:intergenic 65.0%
CGGCAGCAAAACGGCGATGG+AGG - chr1_1:75528875-75528894 Msa0044060:three_prime_UTR 65.0%
GAGGAGGCAAGCTGGAGCTC+TGG - chr1_1:75528894-75528913 Msa0044060:three_prime_UTR 65.0%
! TAACCAGTGACCGGGGGCAC+TGG - chr1_1:75529387-75529406 Msa0044060:CDS 65.0%
TAACCAGTGCCCCCGGTCAC+TGG + chr1_1:75529393-75529412 None:intergenic 65.0%
CGCCACTGCAAGCGTTTGGG+AGG + chr1_1:75528746-75528765 None:intergenic 65.0%
CAGCCGCCACTGCAAGCGTT+TGG + chr1_1:75528750-75528769 None:intergenic 65.0%
CGGCAGCAAAACGGCGATGG+AGG - chr1_1:75528875-75528894 Msa0044060:three_prime_UTR 65.0%
GAGGAGGCAAGCTGGAGCTC+TGG - chr1_1:75528894-75528913 Msa0044060:three_prime_UTR 65.0%
! TAACCAGTGACCGGGGGCAC+TGG - chr1_1:75529387-75529406 Msa0044060:CDS 65.0%
TAACCAGTGCCCCCGGTCAC+TGG + chr1_1:75529393-75529412 None:intergenic 65.0%
CGGCGATGGAGGAGGCAAGC+TGG - chr1_1:75528886-75528905 Msa0044060:three_prime_UTR 70.0%
CACAACGGCGGCGCAACCGT+CGG - chr1_1:75528980-75528999 Msa0044060:intron 70.0%
CGGCGATGGAGGAGGCAAGC+TGG - chr1_1:75528886-75528905 Msa0044060:three_prime_UTR 70.0%
CACAACGGCGGCGCAACCGT+CGG - chr1_1:75528980-75528999 Msa0044060:intron 70.0%
CGACGGTTGCGCCGCCGTTG+TGG + chr1_1:75528982-75529001 None:intergenic 75.0%
CGACGGTTGCGCCGCCGTTG+TGG + chr1_1:75528982-75529001 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75528719 75531107 75528719 ID=Msa0044060;Name=Msa0044060
chr1_1 mRNA 75528719 75531107 75528719 ID=Msa0044060-mRNA-1;Parent=Msa0044060;Name=Msa0044060-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.5|0.2|0.8|0.25|0.2|5|214|183
chr1_1 exon 75528719 75528997 75528719 ID=Msa0044060-mRNA-1:exon:25502;Parent=Msa0044060-mRNA-1
chr1_1 exon 75529269 75529362 75529269 ID=Msa0044060-mRNA-1:exon:25501;Parent=Msa0044060-mRNA-1
chr1_1 exon 75529384 75529530 75529384 ID=Msa0044060-mRNA-1:exon:25500;Parent=Msa0044060-mRNA-1
chr1_1 exon 75529934 75529972 75529934 ID=Msa0044060-mRNA-1:exon:25499;Parent=Msa0044060-mRNA-1
chr1_1 exon 75530901 75531107 75530901 ID=Msa0044060-mRNA-1:exon:25498;Parent=Msa0044060-mRNA-1
chr1_1 CDS 75530901 75531107 75530901 ID=Msa0044060-mRNA-1:cds;Parent=Msa0044060-mRNA-1
chr1_1 CDS 75529934 75529972 75529934 ID=Msa0044060-mRNA-1:cds;Parent=Msa0044060-mRNA-1
chr1_1 CDS 75529384 75529530 75529384 ID=Msa0044060-mRNA-1:cds;Parent=Msa0044060-mRNA-1
chr1_1 CDS 75529269 75529362 75529269 ID=Msa0044060-mRNA-1:cds;Parent=Msa0044060-mRNA-1
chr1_1 CDS 75528933 75528997 75528933 ID=Msa0044060-mRNA-1:cds;Parent=Msa0044060-mRNA-1
chr1_1 three_prime_UTR 75528719 75528932 75528719 ID=Msa0044060-mRNA-1:three_prime_utr;Parent=Msa0044060-mRNA-1
Gene Sequence

>Msa0044060

ATGACACCACCAACCAAACCGGAACCTCCCAAACGCTTGCAGTGGCGGCTGAGACAGAGAAAGCTTGCGTCCAAACTAGATCTGAAGACAGCCGAAGAGCAGACACGAACGGAAGTTGAGGCCGCCAGAGACTTACCAACAACAAACCTCAAAAGACGGCAGCAAAACGGCGATGGAGGAGGCAAGCTGGAGCTCTGGGTCTTGAAGGGTTTCGATTTCAATCCTCCGAAACAACAATTTCATACGATCATGGACACTTCAAATCCTGCTGCATTTGTCAATGCCCAAGTTCTTCCCAATTTCATTGGAAAAAAAGTAAGAACAGTGGTTCAGGTGAATCATTCTGATGGTGCGGCAATCACGGGAAATTCAACTGATGAATCTCAGATAACTGTTCCTGTCATGAATTATGTTGAGGTTATTGGCATTGCTGAAAGTAACAACTCTATCCATGCTGAAATATTGACTGACTTTGGTGCCACATTTGACGTCAACTCTTACAATCAGCTATGCCAACTAGCAAATGGTGAATGCAGAAGTCTGTTTCTTTAG
Protein sequence

>Msa0044060

MTPPTKPEPPKRLQWRLRQRKLASKLDLKTAEEQTRTEVEAARDLPTTNLKRRQQNGDGGGKLELWVLKGFDFNPPKQQFHTIMDTSNPAAFVNAQVLPNFIGKKVRTVVQVNHSDGAAITGNSTDESQITVPVMNYVEVIGIAESNNSIHAEILTDFGATFDVNSYNQLCQLANGECRSLFL*