AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481890 MtrunA17_Chr7g0266631 99.206 1007 8 0 1 1007 1 1007 0.0 2058
Msa0481890 MtrunA17_Chr1g0178411 75.896 1004 241 1 4 1007 8 1010 0.0 1580
Msa0481890 MtrunA17_Chr2g0327581 48.617 1012 506 6 4 1007 44 1049 0.0 906
Msa0481890 MtrunA17_Chr1g0182151 42.240 973 552 6 3 972 48 1013 0.0 726
Msa0481890 MtrunA17_Chr3g0132921 38.287 397 206 12 9 390 9 381 5.79e-72 248
Msa0481890 MtrunA17_Chr4g0069141 40.898 401 202 10 9 398 153 529 9.47e-70 255
Msa0481890 MtrunA17_Chr4g0045381 40.404 396 191 9 9 391 193 556 4.30e-68 250
Msa0481890 MtrunA17_Chr1g0193221 36.406 434 229 9 10 430 4 403 5.96e-68 248
Msa0481890 MtrunA17_Chr5g0427481 38.000 400 212 10 10 395 18 395 2.62e-67 246
Msa0481890 MtrunA17_Chr3g0134191 38.519 405 204 10 10 388 9 394 3.26e-67 244
Msa0481890 MtrunA17_Chr1g0152231 42.442 344 165 6 56 389 46 366 1.26e-66 240
Msa0481890 MtrunA17_Chr4g0053211 37.470 411 202 13 9 386 12 400 7.60e-66 241
Msa0481890 MtrunA17_Chr3g0122121 36.946 406 210 9 10 394 99 479 1.20e-65 241
Msa0481890 MtrunA17_Chr2g0322291 38.539 397 210 7 9 394 88 461 2.84e-65 241
Msa0481890 MtrunA17_Chr1g0153061 37.284 405 209 11 10 388 9 394 2.57e-64 236
Msa0481890 MtrunA17_Chr7g0258991 38.363 391 187 11 9 386 73 422 3.54e-62 229
Msa0481890 MtrunA17_Chr8g0377731 39.143 350 181 8 56 387 91 426 5.43e-59 221
Msa0481890 MtrunA17_Chr4g0035661 37.018 389 193 11 9 386 89 436 3.35e-58 218
Msa0481890 MtrunA17_Chr1g0192481 35.052 388 214 10 9 391 58 412 4.81e-58 210
Msa0481890 MtrunA17_Chr2g0319271 37.989 358 190 11 9 353 399 737 1.06e-57 213
Msa0481890 MtrunA17_Chr2g0312631 34.305 446 227 15 9 443 384 774 1.37e-57 216
Msa0481890 MtrunA17_Chr5g0421591 32.220 509 291 14 9 513 374 832 1.45e-57 214
Msa0481890 MtrunA17_Chr5g0407791 36.524 397 205 11 1 394 886 1238 1.75e-57 216
Msa0481890 MtrunA17_Chr5g0421521 32.220 509 291 14 9 513 374 832 4.03e-57 214
Msa0481890 MtrunA17_Chr3g0142261 34.910 444 240 11 55 486 66 472 5.08e-57 215
Msa0481890 MtrunA17_Chr3g0145071 36.649 382 204 11 9 386 99 446 8.32e-57 213
Msa0481890 MtrunA17_Chr7g0271961 37.008 381 203 11 9 384 401 749 8.97e-57 213
Msa0481890 MtrunA17_Chr1g0191851 38.950 362 186 8 9 364 147 479 1.06e-56 210
Msa0481890 MtrunA17_Chr5g0411971 32.220 509 291 14 9 513 399 857 1.35e-56 213
Msa0481890 MtrunA17_Chr2g0307481 36.111 360 191 7 10 359 69 399 2.58e-56 206
Msa0481890 MtrunA17_Chr4g0049011 37.778 360 194 11 9 357 279 619 7.53e-56 205
Msa0481890 MtrunA17_Chr7g0272871 38.292 363 187 8 9 364 127 459 1.24e-55 206
Msa0481890 MtrunA17_Chr6g0483701 34.118 425 217 10 56 475 77 443 1.30e-55 209
Msa0481890 MtrunA17_Chr4g0062291 36.388 371 184 9 7 359 121 457 3.80e-55 204
Msa0481890 MtrunA17_Chr4g0042061 37.255 357 193 10 9 353 432 769 3.88e-55 206
Msa0481890 MtrunA17_Chr2g0280421 36.461 373 211 9 9 377 437 787 1.07e-54 204
Msa0481890 MtrunA17_Chr8g0372171 32.662 447 254 10 10 444 20 431 2.67e-54 205
Msa0481890 MtrunA17_Chr3g0102921 35.484 403 202 12 10 391 439 804 5.13e-54 205
Msa0481890 MtrunA17_Chr8g0369881 34.491 403 217 10 1 400 872 1230 6.49e-54 205
Msa0481890 MtrunA17_Chr4g0036001 33.178 428 251 6 10 433 25 421 1.23e-53 202
Msa0481890 MtrunA17_Chr1g0195111 36.798 356 189 9 9 356 396 723 1.25e-53 203
Msa0481890 MtrunA17_Chr5g0405181 34.367 387 211 9 10 386 21 374 2.82e-52 199
Msa0481890 MtrunA17_Chr7g0245931 33.333 405 214 8 56 428 98 478 1.01e-50 193
Msa0481890 MtrunA17_Chr7g0257301 36.728 324 170 7 54 356 434 743 3.97e-50 192
Msa0481890 MtrunA17_Chr5g0398521 32.287 446 251 10 10 437 58 470 7.18e-50 191
Msa0481890 MtrunA17_Chr5g0447041 33.886 422 207 11 9 384 434 829 8.54e-50 192
Msa0481890 MtrunA17_Chr7g0238581 32.493 357 204 7 10 358 26 353 3.10e-49 186
Msa0481890 MtrunA17_Chr3g0101021 32.853 347 203 7 53 386 105 434 4.51e-49 189
Msa0481890 MtrunA17_Chr1g0191181 35.598 368 209 11 9 373 88 430 7.24e-48 181
Msa0481890 MtrunA17_Chr5g0445211 34.195 348 197 8 54 386 107 437 1.96e-47 184
Msa0481890 MtrunA17_Chr2g0331761 35.393 356 188 8 10 356 186 508 2.36e-47 181
Msa0481890 MtrunA17_Chr4g0070001 28.222 613 323 19 10 574 144 687 2.12e-46 181
Msa0481890 MtrunA17_Chr6g0485471 32.266 406 228 10 4 393 107 481 1.14e-45 176
Msa0481890 MtrunA17_Chr4g0067421 33.241 361 200 9 10 356 206 539 7.15e-43 168
Msa0481890 MtrunA17_Chr2g0295881 28.330 473 272 12 10 443 198 642 2.52e-42 167
Msa0481890 MtrunA17_Chr8g0367581 35.876 354 180 16 9 355 146 459 3.03e-38 155
Msa0481890 MtrunA17_Chr1g0187411 31.948 385 185 16 10 360 131 472 4.10e-32 134
Msa0481890 MtrunA17_Chr8g0386891 41.538 195 99 4 201 383 4 195 2.68e-30 125
Msa0481890 MtrunA17_Chr7g0269681 40.230 174 95 3 201 368 41 211 2.41e-27 117
Msa0481890 MtrunA17_Chr8g0390981 39.634 164 86 4 9 170 515 667 4.82e-26 115
Msa0481890 MtrunA17_Chr8g0390991 42.784 194 97 5 201 384 4 193 1.33e-24 109
Msa0481890 MtrunA17_Chr6g0484501 39.487 195 103 4 201 383 34 225 4.33e-24 102
Msa0481890 MtrunA17_Chr3g0142841 27.931 290 158 8 58 332 145 398 8.64e-24 108
Msa0481890 MtrunA17_Chr6g0470541 27.090 299 185 10 56 353 51 317 1.69e-23 107
Msa0481890 MtrunA17_Chr6g0484511 35.625 160 90 4 9 166 289 437 6.60e-22 100
Msa0481890 MtrunA17_Chr8g0386901 35.849 159 88 5 9 164 483 630 1.16e-19 94.7
Msa0481890 MtrunA17_Chr7g0269691 36.478 159 85 6 9 164 400 545 4.51e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481890 AT2G36200.1 70.618 1004 294 1 4 1007 7 1009 0.0 1468
Msa0481890 AT2G36200.2 68.502 1035 294 2 4 1007 7 1040 0.0 1450
Msa0481890 AT3G45850.2 48.842 993 494 6 4 991 50 1033 0.0 904
Msa0481890 AT3G45850.1 48.842 993 494 6 4 991 50 1033 0.0 904
Msa0481890 AT2G28620.1 47.164 1005 523 5 4 1007 45 1042 0.0 891
Msa0481890 AT2G28620.3 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa0481890 AT2G28620.2 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa0481890 AT2G37420.1 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa0481890 AT2G37420.2 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa0481890 AT5G60930.2 36.501 463 236 14 10 441 7 442 5.06e-69 252
Msa0481890 AT5G60930.3 36.501 463 236 14 10 441 7 442 5.52e-69 252
Msa0481890 AT5G60930.1 36.501 463 236 14 10 441 7 442 1.01e-68 251
Msa0481890 AT3G17360.3 40.695 403 183 9 6 386 165 533 2.64e-68 251
Msa0481890 AT3G17360.2 40.695 403 183 9 6 386 165 533 3.22e-68 251
Msa0481890 AT3G17360.1 40.695 403 183 9 6 386 165 533 3.45e-68 251
Msa0481890 AT1G59540.1 41.667 336 169 5 58 389 46 358 3.82e-68 245
Msa0481890 AT5G47820.2 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa0481890 AT5G47820.1 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa0481890 AT3G19050.1 42.162 370 176 8 9 364 193 538 3.15e-66 245
Msa0481890 AT3G10180.1 36.693 387 202 7 10 386 4 357 6.38e-66 243
Msa0481890 AT3G10180.2 36.693 387 202 7 10 386 4 357 6.51e-66 243
Msa0481890 AT3G44050.1 38.945 398 209 7 9 395 93 467 1.81e-65 241
Msa0481890 AT3G12020.4 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa0481890 AT3G12020.1 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa0481890 AT3G23670.2 40.896 357 168 10 53 385 128 465 1.12e-64 237
Msa0481890 AT2G22610.3 33.658 514 274 13 9 513 418 873 2.28e-64 237
Msa0481890 AT3G12020.3 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa0481890 AT3G12020.2 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa0481890 AT2G22610.1 33.658 514 274 13 9 513 417 872 2.58e-64 237
Msa0481890 AT2G22610.2 33.800 500 267 12 9 499 417 861 5.68e-64 236
Msa0481890 AT3G23670.1 40.896 357 168 10 53 385 128 465 7.33e-64 236
Msa0481890 AT4G14150.1 38.251 366 185 8 54 396 124 471 1.77e-62 232
Msa0481890 AT3G50240.2 36.520 408 208 12 10 388 26 411 7.10e-62 228
Msa0481890 AT3G50240.4 36.520 408 208 12 10 388 26 411 7.63e-62 229
Msa0481890 AT3G50240.1 36.520 408 208 12 10 388 26 411 8.38e-62 229
Msa0481890 AT5G06670.8 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0481890 AT5G06670.4 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0481890 AT5G06670.7 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0481890 AT5G06670.5 37.760 384 199 11 9 386 66 415 2.21e-61 224
Msa0481890 AT5G06670.2 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa0481890 AT5G06670.3 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa0481890 AT1G73860.2 36.935 398 199 12 9 383 426 794 2.53e-59 221
Msa0481890 AT1G21730.1 36.573 391 208 11 9 393 75 431 2.64e-59 220
Msa0481890 AT1G73860.1 37.186 398 198 12 9 383 509 877 7.48e-59 220
Msa0481890 AT5G06670.6 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa0481890 AT5G06670.1 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa0481890 AT3G63480.2 38.292 363 194 9 9 364 3 342 2.72e-58 208
Msa0481890 AT1G18370.1 34.829 468 252 13 10 461 32 462 2.97e-58 218
Msa0481890 AT1G18410.3 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa0481890 AT1G18410.2 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa0481890 AT1G18410.4 35.461 423 217 12 9 413 632 1016 7.72e-58 218
Msa0481890 AT2G21380.2 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa0481890 AT2G21380.1 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa0481890 AT3G63480.1 38.147 367 193 11 9 364 3 346 3.24e-57 205
Msa0481890 AT5G27000.1 35.068 442 237 16 9 433 394 802 3.51e-57 214
Msa0481890 AT4G39050.1 37.150 393 195 11 9 390 98 449 7.28e-57 214
Msa0481890 AT1G18410.5 35.000 420 210 13 9 413 479 850 1.92e-56 212
Msa0481890 AT5G27550.2 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa0481890 AT5G27550.1 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa0481890 AT1G18410.1 34.515 423 213 12 9 413 632 1008 8.79e-56 211
Msa0481890 AT4G05190.2 38.095 357 191 11 9 353 415 753 1.25e-55 207
Msa0481890 AT5G65930.1 37.190 363 191 9 1 360 884 1212 1.34e-55 211
Msa0481890 AT5G65930.3 37.190 363 191 9 1 360 891 1219 1.35e-55 211
Msa0481890 AT5G65930.2 37.190 363 191 9 1 360 885 1213 1.36e-55 211
Msa0481890 AT3G54870.1 38.484 343 178 8 56 386 150 471 2.02e-55 209
Msa0481890 AT3G54870.3 38.484 343 178 8 56 386 150 471 2.34e-55 208
Msa0481890 AT4G05190.1 38.095 357 191 11 9 353 428 766 2.45e-55 207
Msa0481890 AT3G54870.2 38.484 343 178 8 56 386 150 471 3.83e-55 209
Msa0481890 AT1G09170.3 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa0481890 AT1G09170.7 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa0481890 AT1G09170.4 38.746 351 188 10 9 356 434 760 5.72e-55 206
Msa0481890 AT4G21270.1 37.047 359 190 10 9 352 431 768 6.10e-55 206
Msa0481890 AT5G66310.2 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0481890 AT5G66310.3 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0481890 AT5G66310.1 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0481890 AT1G72250.4 35.806 391 207 10 9 383 511 873 6.30e-55 209
Msa0481890 AT5G54670.3 37.465 355 192 11 9 353 336 670 6.82e-55 204
Msa0481890 AT1G72250.3 35.806 391 207 10 9 383 512 874 6.83e-55 208
Msa0481890 AT1G09170.2 38.746 351 188 10 9 356 434 760 7.12e-55 206
Msa0481890 AT1G72250.2 35.806 391 207 10 9 383 500 862 7.30e-55 208
Msa0481890 AT1G72250.1 35.806 391 207 10 9 383 491 853 7.42e-55 208
Msa0481890 AT4G27180.1 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa0481890 AT4G27180.2 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa0481890 AT3G49650.1 33.097 423 232 11 5 407 10 401 1.10e-54 205
Msa0481890 AT1G09170.5 38.746 351 188 10 9 356 434 760 1.31e-54 207
Msa0481890 AT5G54670.1 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa0481890 AT5G54670.2 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa0481890 AT1G18550.1 38.889 306 160 4 54 357 202 482 7.41e-54 201
Msa0481890 AT3G51150.2 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0481890 AT3G51150.4 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0481890 AT3G51150.3 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0481890 AT3G51150.1 32.579 442 255 10 2 434 12 419 8.48e-54 204
Msa0481890 AT3G44730.1 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa0481890 AT3G44730.4 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa0481890 AT3G44730.2 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa0481890 AT3G44730.3 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa0481890 AT1G12430.1 31.056 483 261 11 10 467 71 506 4.76e-53 201
Msa0481890 AT1G12430.2 31.056 483 261 11 10 467 71 506 4.97e-53 201
Msa0481890 AT1G59540.2 41.328 271 144 3 123 389 7 266 9.38e-53 198
Msa0481890 AT4G24170.1 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa0481890 AT4G24170.2 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa0481890 AT2G47500.2 36.080 352 195 9 9 356 399 724 3.25e-52 199
Msa0481890 AT2G47500.1 36.182 351 194 9 10 356 400 724 4.37e-52 199
Msa0481890 AT4G38950.3 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0481890 AT4G38950.5 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0481890 AT4G38950.4 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0481890 AT4G38950.1 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0481890 AT4G38950.2 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0481890 AT2G21300.2 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0481890 AT2G21300.4 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0481890 AT2G21300.3 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0481890 AT2G21300.1 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0481890 AT2G21300.5 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0481890 AT1G55550.1 35.817 349 195 9 9 356 91 411 1.16e-50 193
Msa0481890 AT5G41310.1 35.433 381 189 12 9 375 422 759 2.53e-50 193
Msa0481890 AT3G10310.1 35.876 354 194 10 9 356 363 689 2.92e-50 193
Msa0481890 AT3G10310.2 35.876 354 194 10 9 356 363 689 2.95e-50 193
Msa0481890 AT3G43210.3 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0481890 AT3G43210.5 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0481890 AT3G43210.2 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0481890 AT3G43210.4 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0481890 AT3G43210.1 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0481890 AT1G01950.1 31.004 458 259 9 10 435 61 493 1.48e-49 190
Msa0481890 AT1G01950.2 31.004 458 259 9 10 435 61 493 1.58e-49 190
Msa0481890 AT1G63640.2 35.544 377 205 10 9 375 472 820 1.83e-49 191
Msa0481890 AT1G01950.3 31.004 458 259 9 10 435 61 493 1.93e-49 190
Msa0481890 AT1G63640.1 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa0481890 AT1G63640.4 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa0481890 AT1G63640.3 35.185 378 212 10 9 375 472 827 3.01e-49 190
Msa0481890 AT1G63640.5 35.185 378 212 10 9 375 462 817 4.01e-49 190
Msa0481890 AT5G27950.1 33.412 425 234 12 9 413 79 474 3.66e-48 182
Msa0481890 AT3G50240.3 38.006 321 157 9 96 388 3 309 9.25e-47 182
Msa0481890 AT1G09170.6 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa0481890 AT1G09170.8 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa0481890 AT3G16060.1 34.270 356 192 8 10 356 170 492 1.12e-46 179
Msa0481890 AT5G02370.1 31.421 366 208 9 9 366 20 350 1.58e-45 173
Msa0481890 AT3G20150.2 32.184 348 206 8 53 386 133 464 9.81e-45 176
Msa0481890 AT3G20150.1 32.184 348 206 8 53 386 133 464 1.30e-44 176
Msa0481890 AT1G09170.1 36.103 349 164 11 9 356 434 724 3.52e-44 174
Msa0481890 AT3G16630.2 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa0481890 AT3G16630.1 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa0481890 AT1G01950.4 31.117 376 203 8 92 435 1 352 1.52e-37 152
Msa0481890 AT5G65460.2 30.303 396 225 10 9 391 138 495 9.87e-37 150
Msa0481890 AT5G65460.6 30.303 396 225 10 9 391 138 495 1.20e-36 150
Msa0481890 AT5G65460.1 30.303 396 225 10 9 391 138 495 1.80e-36 150
Msa0481890 AT5G65460.4 30.303 396 225 10 9 391 138 495 2.05e-36 150
Msa0481890 AT5G65460.3 30.303 396 232 11 9 391 138 502 5.69e-35 145
Msa0481890 AT5G10470.2 31.161 353 198 11 9 355 142 455 2.58e-33 140
Msa0481890 AT5G10470.1 31.161 353 198 11 9 355 142 455 2.69e-33 140
Msa0481890 AT4G14330.1 30.986 355 201 12 10 356 49 367 5.13e-32 135
Msa0481890 AT3G51150.5 34.661 251 161 2 187 434 16 266 1.98e-31 133
Msa0481890 AT5G27950.2 32.476 311 181 8 123 413 7 308 2.68e-31 129
Msa0481890 AT5G42490.2 30.363 303 176 7 1 299 1 272 2.01e-29 127
Msa0481890 AT5G42490.1 30.363 303 176 7 1 299 1 272 2.11e-29 127
Msa0481890 AT5G65460.5 30.502 259 149 6 143 391 12 249 4.05e-18 90.5
Msa0481890 AT5G23910.2 25.490 255 155 7 76 330 79 298 3.16e-16 84.0
Msa0481890 AT5G23910.1 25.490 255 155 7 76 330 75 294 3.17e-16 84.0
Msa0481890 AT1G20060.10 26.897 290 169 6 58 333 165 425 1.10e-14 79.3
Msa0481890 AT1G20060.9 26.897 290 169 6 58 333 165 425 1.16e-14 79.3
Msa0481890 AT1G20060.5 26.897 290 169 6 58 333 165 425 1.22e-14 79.3
Msa0481890 AT1G20060.4 26.897 290 169 6 58 333 165 425 1.25e-14 79.3
Msa0481890 AT1G20060.8 26.897 290 169 6 58 333 165 425 1.31e-14 79.3
Msa0481890 AT1G20060.3 26.897 290 169 6 58 333 165 425 1.32e-14 79.3
Msa0481890 AT1G20060.2 26.897 290 169 6 58 333 165 425 1.33e-14 79.3
Msa0481890 AT1G20060.6 26.897 290 169 6 58 333 165 425 1.34e-14 79.3
Msa0481890 AT1G20060.7 26.897 290 169 6 58 333 165 425 1.35e-14 79.3

Find 218 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCACCCAATTGAATTAA+TGG 0.200750 3_3:-88267182 Msa0481890:exon
GCTTCATTATTTGCGAAAAT+TGG 0.208423 3_3:-88270035 Msa0481890:intron
CGAAATCTGGTTAATATTAA+AGG 0.223932 3_3:-88267071 Msa0481890:three_prime_UTR
AGTACTGCTCATTCGGCTTT+TGG 0.230539 3_3:-88268292 Msa0481890:CDS
TTTCTTTCTCTTTCTCTTCT+GGG 0.237285 3_3:+88273167 None:intergenic
CTCGGAATCACTCCTGCTTC+TGG 0.261269 3_3:+88272367 None:intergenic
CAATGCTCTCTGTTTGCATT+TGG 0.270593 3_3:+88268915 None:intergenic
GGAAATTTCAAAGGTTAGTT+TGG 0.272007 3_3:-88272233 Msa0481890:CDS
TCCTGATAGTATCTTTCCTT+TGG 0.282763 3_3:+88270942 None:intergenic
ACTCAAAGCTTGTTGATCTT+AGG 0.286567 3_3:-88268575 Msa0481890:CDS
ACCACCACCATTAATTCAAT+TGG 0.289536 3_3:+88267175 None:intergenic
AAGCCCTTCTTGAGGAATTC+CGG 0.291935 3_3:-88267272 Msa0481890:CDS
TTAATTAGTTCTTCACCTTC+AGG 0.292142 3_3:+88271911 None:intergenic
AATAAAAGTTTGCTTACATT+AGG 0.296521 3_3:-88271682 Msa0481890:CDS
CTGAATTTGGTGGATCTTGC+GGG 0.297261 3_3:-88271878 Msa0481890:CDS
TGCAAAGAGAACCAACCTTC+TGG 0.303724 3_3:+88269855 None:intergenic
CTTATCATGAATTCCCAAAA+AGG 0.315109 3_3:+88269766 None:intergenic
TAAGTGTGGTAAACTGAATT+TGG 0.316113 3_3:-88271891 Msa0481890:CDS
TGATTTAGAGAAAGCTCTTC+AGG 0.326196 3_3:-88270063 Msa0481890:CDS
TGAATGACCGTGGGAGGATA+TGG 0.333613 3_3:+88269414 None:intergenic
AAAATGTCTGGTAAAGAAAA+AGG 0.333790 3_3:-88273092 Msa0481890:CDS
CATGAGGCTGTAAATGAGTT+AGG 0.341917 3_3:-88268253 Msa0481890:CDS
AGTTTCTGCAGTGCGTCTTT+TGG 0.342051 3_3:+88272084 None:intergenic
TCTTAGCGTGGAACAAATAA+AGG 0.345084 3_3:-88269020 Msa0481890:CDS
CTCAAAGCTTGTTGATCTTA+GGG 0.346483 3_3:-88268574 Msa0481890:CDS
ATCAAGTTTGTTGCTTAAAT+CGG 0.348509 3_3:+88270449 None:intergenic
TTCAAGTTCTACTTCGTTGC+AGG 0.350179 3_3:-88273061 Msa0481890:intron
ATAAAAGTTTGCTTACATTA+GGG 0.353144 3_3:-88271681 Msa0481890:CDS
ACTCTTATCAAGGATCTTTA+CGG 0.356503 3_3:-88271132 Msa0481890:CDS
CTTTAGTTCTTCCTCTCTAC+TGG 0.368324 3_3:+88270302 None:intergenic
TTGCGACAGAGTCACTTATC+AGG 0.371706 3_3:-88268216 Msa0481890:intron
AGATCTACGACTCAACGTTT+TGG 0.373567 3_3:+88273272 None:intergenic
ACCTCAGGCTCACATCTTAC+TGG 0.376235 3_3:+88267339 None:intergenic
TCCAAAGGAAAGATACTATC+AGG 0.382428 3_3:-88270943 Msa0481890:CDS
ATATATCTCGTTCCGGCGCT+AGG 0.385461 3_3:-88271847 Msa0481890:CDS
AGCCCTTCTTGAGGAATTCC+GGG 0.389134 3_3:-88267271 Msa0481890:CDS
GCTGTTTCTCAGAATATTGC+CGG 0.394967 3_3:-88272853 Msa0481890:CDS
AGTTTGAAGAATGCGAAATC+TGG 0.395758 3_3:-88267084 Msa0481890:three_prime_UTR
AACCCTATCGATGTGTTTGC+CGG 0.398973 3_3:+88272834 None:intergenic
GAGTCTATTGTACCCTTACT+TGG 0.406741 3_3:+88267315 None:intergenic
CGTTTACTTCGTGATTCACT+TGG 0.406888 3_3:-88271499 Msa0481890:CDS
TATTGTAGAGTGGGCCGAAT+GGG 0.407632 3_3:-88272399 Msa0481890:intron
TTCACATGCCCTGTGTTCAA+TGG 0.410810 3_3:+88267492 None:intergenic
TAGTGTTAGTACTGCTCATT+CGG 0.418070 3_3:-88268299 Msa0481890:CDS
GTAAGGGAATGGTAGCGTTC+GGG 0.425898 3_3:+88273210 None:intergenic
CGTAACTCGTCGTCACTAAA+CGG 0.426279 3_3:+88272925 None:intergenic
TCCTCAAGAAGGGCTTCAAT+TGG 0.434669 3_3:+88267279 None:intergenic
CTTCTGTGGCCGCAGTTGTA+AGG 0.441833 3_3:+88269276 None:intergenic
TAATTAGTTCTTCACCTTCA+GGG 0.442192 3_3:+88271912 None:intergenic
ATATTACAACCAATGCAAAA+AGG 0.444775 3_3:-88268497 Msa0481890:CDS
CAGGGGTTGCTTCTTTGATG+TGG 0.445907 3_3:+88271930 None:intergenic
AGTTCTTGTGAGAGGGTTGG+AGG 0.446987 3_3:-88272161 Msa0481890:CDS
CCTTTACCATCCTCCATAAG+AGG 0.448559 3_3:+88272187 None:intergenic
ACAACTGCGGCCACAGAAGC+TGG 0.453498 3_3:-88269272 Msa0481890:CDS
TGAGCCTGAGGTTCCAAGTA+AGG 0.455105 3_3:-88267328 Msa0481890:CDS
GATTACTGATTTGCTTGCTC+CGG 0.455133 3_3:-88272257 Msa0481890:CDS
GTGAAAATGAGAGCGGGGTA+AGG 0.456226 3_3:+88273193 None:intergenic
CTTGTGTCTAAATCCCATCT+TGG 0.459939 3_3:-88267021 Msa0481890:three_prime_UTR
ACTTGCTCGGTTGTCTGTTG+TGG 0.461278 3_3:-88267148 Msa0481890:three_prime_UTR
AGGATGTAATGTGATATCTA+AGG 0.461712 3_3:-88267051 Msa0481890:three_prime_UTR
GCAAAGAGAACCAACCTTCT+GGG 0.463613 3_3:+88269856 None:intergenic
GGTAAGGGAATGGTAGCGTT+CGG 0.465385 3_3:+88273209 None:intergenic
GCTTATGGTCAAACCGGTAC+CGG 0.465857 3_3:-88272594 Msa0481890:CDS
GTTCTTTGCCACATCTTCCT+CGG 0.465992 3_3:+88267911 None:intergenic
ATGAGGCTGTAAATGAGTTA+GGG 0.467123 3_3:-88268252 Msa0481890:CDS
AATTTCAAAGGTTAGTTTGG+AGG 0.468206 3_3:-88272230 Msa0481890:CDS
TCAGGAAGAGATTGAGAAGA+AGG 0.468367 3_3:-88270925 Msa0481890:intron
ACCTTGGTCATATTCCATAC+AGG 0.468931 3_3:-88271633 Msa0481890:intron
AAATGTTGTGCGTTTGCATA+AGG 0.469562 3_3:-88269473 Msa0481890:CDS
TGGAGTTCTTGTGAGAGGGT+TGG 0.470076 3_3:-88272164 Msa0481890:CDS
CCACCACCATTAATTCAATT+GGG 0.472536 3_3:+88267176 None:intergenic
AGTTCTCTTTGTTGTGCAGA+AGG 0.472884 3_3:+88272681 None:intergenic
TTGTGTCTAAATCCCATCTT+GGG 0.473561 3_3:-88267020 Msa0481890:three_prime_UTR
CCAAACTAATCGAAAATGTC+TGG 0.475096 3_3:-88273104 Msa0481890:exon
ATTTATACTCTTCTCGAAAG+AGG 0.476525 3_3:-88272112 Msa0481890:CDS
GTTTACTTCGTGATTCACTT+GGG 0.477940 3_3:-88271498 Msa0481890:CDS
CACATTGGATTATGCACATA+GGG 0.482800 3_3:-88271407 Msa0481890:CDS
AGCTATATTTCATCCCAAGA+TGG 0.485104 3_3:+88267007 None:intergenic
GAAATTGAACGCCTTAAGTC+AGG 0.486114 3_3:-88271108 Msa0481890:intron
TCAGAAAATATATCTCGTTC+CGG 0.490535 3_3:-88271854 Msa0481890:CDS
GGGGAGTTGCCTCCAGAAGC+AGG 0.490766 3_3:-88272379 Msa0481890:CDS
AAAGCAACTCACCTGACTTA+AGG 0.490808 3_3:+88271097 None:intergenic
GGCTGATCAGATTGAGCAGA+TGG 0.491400 3_3:-88270655 Msa0481890:CDS
AAACACATGCTTGATGAGCT+AGG 0.492131 3_3:+88270093 None:intergenic
CTAACCTTTGAAATTTCCTC+CGG 0.492328 3_3:+88272238 None:intergenic
TGAATCTTCTTCTGATGTAA+AGG 0.493394 3_3:-88267235 Msa0481890:CDS
TCTGGAGGCAACTCCCCATT+CGG 0.494521 3_3:+88272385 None:intergenic
GATGAAATCAACTCTTATCA+AGG 0.496778 3_3:-88271142 Msa0481890:CDS
ACTGAATTTGGTGGATCTTG+CGG 0.498055 3_3:-88271879 Msa0481890:CDS
TCGATATACCGTCAATGAAA+AGG 0.498711 3_3:-88270274 Msa0481890:CDS
TCTAAAACTTCATTTACTAT+CGG 0.500281 3_3:+88272639 None:intergenic
TACTGATTTGCTTGCTCCGG+AGG 0.500556 3_3:-88272254 Msa0481890:CDS
TCTTCTAAGCAATGAACAGC+GGG 0.501914 3_3:+88271439 None:intergenic
TTCACGTTCTTCTGCAGATG+TGG 0.503980 3_3:+88267600 None:intergenic
CACAATTGAATCTTATCAGA+AGG 0.504661 3_3:-88270628 Msa0481890:intron
CGTTGAGTCGTAGATCTAAA+GGG 0.504791 3_3:-88273266 Msa0481890:five_prime_UTR
TATATCTCGTTCCGGCGCTA+GGG 0.505296 3_3:-88271846 Msa0481890:CDS
GCTATATTTCATCCCAAGAT+GGG 0.508639 3_3:+88267008 None:intergenic
TAGGGTCGTGCTAGAGAAGC+TGG 0.509761 3_3:-88271712 Msa0481890:CDS
CCCAATTGAATTAATGGTGG+TGG 0.511093 3_3:-88267176 Msa0481890:exon
TTGCCGGCAAACACATCGAT+AGG 0.515439 3_3:-88272837 Msa0481890:CDS
ACGTTGAGTCGTAGATCTAA+AGG 0.515890 3_3:-88273267 Msa0481890:five_prime_UTR
CCTCTTATGGAGGATGGTAA+AGG 0.516458 3_3:-88272187 Msa0481890:CDS
AATTAGTTCTTCACCTTCAG+GGG 0.516668 3_3:+88271913 None:intergenic
GTACCCTTACTTGGAACCTC+AGG 0.521316 3_3:+88267324 None:intergenic
TCTTGAAGAGTTTGTAGCAC+GGG 0.523819 3_3:-88268942 Msa0481890:CDS
TGAAAATGAGAGCGGGGTAA+GGG 0.524760 3_3:+88273194 None:intergenic
ATGAGAGCGGGGTAAGGGAA+TGG 0.526307 3_3:+88273199 None:intergenic
AGAAGAAACTTTGAGCACAT+TGG 0.527349 3_3:-88271422 Msa0481890:CDS
TCAAGCGGAACTTGCCCAGA+AGG 0.527458 3_3:-88269870 Msa0481890:CDS
TTTACTTCGTGATTCACTTG+GGG 0.527789 3_3:-88271497 Msa0481890:CDS
GCGGAACTTGCCCAGAAGGT+TGG 0.529635 3_3:-88269866 Msa0481890:CDS
TTTCCCGGAATTCCTCAAGA+AGG 0.529661 3_3:+88267268 None:intergenic
AAAATCTGCTTAACAGCCCT+CGG 0.532341 3_3:+88272349 None:intergenic
AGCAATGAGTTTCTCCGACT+CGG 0.536022 3_3:+88268769 None:intergenic
ATATCTGAACAGAGAAAAGC+AGG 0.537704 3_3:-88270243 Msa0481890:intron
AAAGGAGATTTCTGAGCGAT+CGG 0.540594 3_3:-88269002 Msa0481890:CDS
ATCTCGTTCCGGCGCTAGGG+AGG 0.540871 3_3:-88271843 Msa0481890:intron
CATTAATTCAATTGGGTGAG+AGG 0.541602 3_3:+88267183 None:intergenic
TTCCCGGAATTCCTCAAGAA+GGG 0.541778 3_3:+88267269 None:intergenic
GGCAAGCTCAGATGCATCGT+TGG 0.542825 3_3:-88269452 Msa0481890:CDS
TTTATACTCTTCTCGAAAGA+GGG 0.544349 3_3:-88272111 Msa0481890:CDS
TTCTGCACGAGCAGCAGCCG+AGG 0.544773 3_3:-88267928 Msa0481890:CDS
GCCAATTGAAGCCCTTCTTG+AGG 0.545654 3_3:-88267280 Msa0481890:CDS
GAAATGATTAACCTTGTCGA+AGG 0.549603 3_3:+88272807 None:intergenic
CTTGTTGATCTTAGGGAGAG+TGG 0.551246 3_3:-88268567 Msa0481890:CDS
AAAGGTGGAGTTCTTGTGAG+AGG 0.552341 3_3:-88272169 Msa0481890:CDS
TTCAATTGAATGACCGTGGG+AGG 0.555275 3_3:+88269408 None:intergenic
CTTACTGGTGTTGTACCACT+AGG 0.557477 3_3:+88267354 None:intergenic
AATACACCGCCCCTTCCCCA+TGG 0.558653 3_3:+88266953 None:intergenic
AAGGTGGAGTTCTTGTGAGA+GGG 0.562194 3_3:-88272168 Msa0481890:CDS
ATACACCGCCCCTTCCCCAT+GGG 0.562424 3_3:+88266954 None:intergenic
GTGTGGTAAACTGAATTTGG+TGG 0.562701 3_3:-88271888 Msa0481890:CDS
CTTTACTTAACAAACAATCC+AGG 0.562813 3_3:-88272063 Msa0481890:intron
TGCTCCGGAGGAAATTTCAA+AGG 0.564496 3_3:-88272242 Msa0481890:CDS
GAGACACATACACCGCCCTC+AGG 0.567781 3_3:+88269512 None:intergenic
ATAACACATACCTTTGCTGC+AGG 0.568335 3_3:+88268385 None:intergenic
GGAATCACTCCTGCTTCTGG+AGG 0.569628 3_3:+88272370 None:intergenic
AAATATTGAGCCAGCTTCTG+TGG 0.569706 3_3:+88269262 None:intergenic
ATCAAAGAAGCAACCCCTGA+AGG 0.571587 3_3:-88271926 Msa0481890:CDS
ACATCTCAAGTGTATTTGCA+TGG 0.571954 3_3:+88267545 None:intergenic
TGCAGCAAAGCATTGCCGTA+TGG 0.572013 3_3:-88268415 Msa0481890:CDS
AACACATGCTTGATGAGCTA+GGG 0.572321 3_3:+88270094 None:intergenic
AAGAAGGGCTTCAATTGGCA+AGG 0.572739 3_3:+88267284 None:intergenic
CAGCTGCCTCTTATGGAGGA+TGG 0.572792 3_3:-88272193 Msa0481890:CDS
TTCTTCAATTGAATGACCGT+GGG 0.577395 3_3:+88269405 None:intergenic
CCTCTGCAACATGCTGCACA+TGG 0.578113 3_3:+88267955 None:intergenic
AAGCTCAGATGCATCGTTGG+AGG 0.578206 3_3:-88269449 Msa0481890:CDS
AATGCCCTTGTGGAGCACCT+TGG 0.582656 3_3:-88271649 Msa0481890:CDS
AGCAGCAGCCGAGGAAGATG+TGG 0.583212 3_3:-88267919 Msa0481890:CDS
TGGAGGTACTCCTGCAGCAA+AGG 0.583971 3_3:-88268395 Msa0481890:intron
ACGAAGCAATGCGCCGCAAG+TGG 0.584260 3_3:-88272905 Msa0481890:CDS
CTTCTTCAATTGAATGACCG+TGG 0.584778 3_3:+88269404 None:intergenic
TTACTTCGTGATTCACTTGG+GGG 0.585368 3_3:-88271496 Msa0481890:CDS
ATGTTTCAACCAGCAACTTG+AGG 0.586402 3_3:-88270511 Msa0481890:intron
TGAGGCTGTAAATGAGTTAG+GGG 0.588970 3_3:-88268251 Msa0481890:CDS
TGCCGGCAAACACATCGATA+GGG 0.591445 3_3:-88272836 Msa0481890:CDS
ATGTTTAGAGAGAATCACTC+AGG 0.592534 3_3:-88267526 Msa0481890:CDS
GGGTGTGTGAAAATGAGAGC+GGG 0.594707 3_3:+88273187 None:intergenic
GGTGAAGAACTAATTAAGTG+TGG 0.594781 3_3:-88271905 Msa0481890:CDS
AAGAACAAGTCATTCTTCGA+TGG 0.597882 3_3:-88268540 Msa0481890:CDS
ATGTATTACCTCCCTAGCGC+CGG 0.599821 3_3:+88271835 None:intergenic
GAACAGAACGGACATCTACA+AGG 0.603630 3_3:-88269809 Msa0481890:CDS
CAAGGTGCTTGCCAGTAGAG+AGG 0.604034 3_3:-88270313 Msa0481890:CDS
ATTGTAGAGTGGGCCGAATG+GGG 0.605112 3_3:-88272398 Msa0481890:intron
AAGCTGCTTCCATTGAACAC+AGG 0.606159 3_3:-88267501 Msa0481890:CDS
GAACGGACATCTACAAGGTG+TGG 0.606575 3_3:-88269804 Msa0481890:CDS
CTTATGGAGGATGGTAAAGG+TGG 0.606629 3_3:-88272184 Msa0481890:CDS
TTATTGTAGAGTGGGCCGAA+TGG 0.607043 3_3:-88272400 Msa0481890:intron
GCACATTGGATTATGCACAT+AGG 0.608499 3_3:-88271408 Msa0481890:CDS
TGTCGCTATAATGCACGTCT+TGG 0.609364 3_3:+88271468 None:intergenic
AGCTGCTTCCATTGAACACA+GGG 0.609438 3_3:-88267500 Msa0481890:CDS
AGGAGAATGCAAAAGATCCA+AGG 0.609671 3_3:-88272553 Msa0481890:intron
TCGTTACAAGTCACCACTTG+CGG 0.611168 3_3:+88272892 None:intergenic
TTCTAAGCAATGAACAGCGG+GGG 0.612866 3_3:+88271441 None:intergenic
GGTGGTGGTATCAACTTGCT+CGG 0.614479 3_3:-88267161 Msa0481890:three_prime_UTR
GCTGATCAGATTGAGCAGAT+GGG 0.615061 3_3:-88270654 Msa0481890:CDS
AAAGCAGCTGCCTCTTATGG+AGG 0.615652 3_3:-88272197 Msa0481890:CDS
GCGAGTGATTAATGCCCTTG+TGG 0.616893 3_3:-88271659 Msa0481890:CDS
AAAGAGATTCAATCTTAGCG+TGG 0.620048 3_3:-88269032 Msa0481890:intron
GAGCCTGAGGTTCCAAGTAA+GGG 0.621669 3_3:-88267327 Msa0481890:CDS
GCTGCAGGAGTACCTCCATA+CGG 0.623230 3_3:+88268400 None:intergenic
CGATGGACATGTGTCATCAG+TGG 0.625704 3_3:-88268523 Msa0481890:CDS
CAGAAGCAGGAGTGATTCCG+AGG 0.626891 3_3:-88272366 Msa0481890:CDS
AAATGGGGTCTATATTCCAA+AGG 0.630492 3_3:-88270958 Msa0481890:CDS
AGCAAAGCATTGCCGTATGG+AGG 0.630722 3_3:-88268412 Msa0481890:CDS
ATCTTGAAGAGTTTGTAGCA+CGG 0.633283 3_3:-88268943 Msa0481890:CDS
CCATGTGCAGCATGTTGCAG+AGG 0.638969 3_3:-88267955 Msa0481890:CDS
TATGACCAAGGTGCTCCACA+AGG 0.639953 3_3:+88271644 None:intergenic
TCATCTGCCATATCCTCCCA+CGG 0.644594 3_3:-88269421 Msa0481890:CDS
AGAGAAAATGAAAGACCTGA+GGG 0.646065 3_3:-88269527 Msa0481890:CDS
GGTGTATGTGTCTCATATTG+AGG 0.648593 3_3:-88269503 Msa0481890:CDS
GGAGAACGTGGAATAAGAGA+CGG 0.650519 3_3:+88267204 None:intergenic
TGGCAAAATTGTGAAGACAA+AGG 0.651471 3_3:-88273328 Msa0481890:five_prime_UTR
AAACTTGAACAAGACTAGCA+AGG 0.654128 3_3:-88270331 Msa0481890:CDS
AGCTGTCTTTCAACACAACA+TGG 0.654858 3_3:-88269227 Msa0481890:CDS
AGAAGCAGGAGTGATTCCGA+GGG 0.655095 3_3:-88272365 Msa0481890:CDS
ACCTGTATGGAATATGACCA+AGG 0.656221 3_3:+88271632 None:intergenic
AATTGGGTGAGAGGAGAACG+TGG 0.659642 3_3:+88267192 None:intergenic
TTCTTCTAAGCAATGAACAG+CGG 0.660743 3_3:+88271438 None:intergenic
AAGAGAAAATGAAAGACCTG+AGG 0.661629 3_3:-88269528 Msa0481890:CDS
ACCAGTAAGATGTGAGCCTG+AGG 0.663461 3_3:-88267340 Msa0481890:CDS
GGAGCAATCAAAATCCGAGT+CGG 0.665209 3_3:-88268783 Msa0481890:CDS
TACACCGCCCCTTCCCCATG+GGG 0.675110 3_3:+88266955 None:intergenic
GAATCAGTTCCTTACAACTG+CGG 0.678491 3_3:-88269285 Msa0481890:intron
TCACCCAATTGAATTAATGG+TGG 0.679217 3_3:-88267179 Msa0481890:exon
ACATCGTTGTCTGAACAGAA+CGG 0.680443 3_3:-88269821 Msa0481890:CDS
TGTTTAGAGAGAATCACTCA+GGG 0.684514 3_3:-88267525 Msa0481890:CDS
ATGACCAAGGTGCTCCACAA+GGG 0.696272 3_3:+88271645 None:intergenic
CTTCTAAGCAATGAACAGCG+GGG 0.703813 3_3:+88271440 None:intergenic
ACACCGCCCCTTCCCCATGG+GGG 0.704634 3_3:+88266956 None:intergenic
TTGCAGGACTATGAGCCTAG+TGG 0.711227 3_3:-88267369 Msa0481890:intron
TGGGTGTGTGAAAATGAGAG+CGG 0.716302 3_3:+88273186 None:intergenic
ACAAGTGAAGAGGACACATG+AGG 0.719990 3_3:-88268269 Msa0481890:CDS
GAAAATGAAAGACCTGAGGG+CGG 0.741209 3_3:-88269524 Msa0481890:CDS
CAACAAACTTGATACCACTG+AGG 0.766437 3_3:-88270439 Msa0481890:intron
GGTGTGTGAAAATGAGAGCG+GGG 0.781251 3_3:+88273188 None:intergenic
ACAATGATATCAGACCTCAG+TGG 0.807291 3_3:+88270425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTAATGTCT+TGG - chr3_3:88269382-88269401 Msa0481890:intron 10.0%
!!! ATACATTATTATATTTTTCT+TGG - chr3_3:88271491-88271510 Msa0481890:CDS 10.0%
!!! TTGGATTTTTTATTATCTAA+CGG + chr3_3:88266877-88266896 None:intergenic 15.0%
!!! TTTAATTTGTTGCATTTTTT+TGG - chr3_3:88267448-88267467 Msa0481890:intron 15.0%
!! ATGAATATACATTGATATTT+AGG - chr3_3:88268628-88268647 Msa0481890:intron 15.0%
!! TGAATATACATTGATATTTA+GGG - chr3_3:88268629-88268648 Msa0481890:intron 15.0%
!! ATGAAAATGAATCTTATAAA+AGG + chr3_3:88268942-88268961 None:intergenic 15.0%
!!! TTTTATATTCTAATTGGTTT+AGG - chr3_3:88268987-88269006 Msa0481890:CDS 15.0%
!!! TTTGTTTTCTTAAAAAACTA+TGG - chr3_3:88269560-88269579 Msa0481890:intron 15.0%
!! ATTATATTTATTTATGTCTC+CGG - chr3_3:88270212-88270231 Msa0481890:intron 15.0%
!! TAATAACTTAAGAAATAGAA+AGG + chr3_3:88272496-88272515 None:intergenic 15.0%
!! TAATATCTATATTTGATCAT+TGG + chr3_3:88272737-88272756 None:intergenic 15.0%
!! AAAAAATGAACGAAATGAAA+GGG + chr3_3:88267139-88267158 None:intergenic 20.0%
!!! AACGTTTTTTAGAAGTTATT+AGG - chr3_3:88267383-88267402 Msa0481890:intron 20.0%
!!! ACGTTTTTTAGAAGTTATTA+GGG - chr3_3:88267384-88267403 Msa0481890:intron 20.0%
!! GTTATTAGGGAATTAATTAA+TGG - chr3_3:88267397-88267416 Msa0481890:intron 20.0%
!!! TCTAAAACTTCATTTACTAT+CGG + chr3_3:88267529-88267548 None:intergenic 20.0%
!!! ATAGTAAATGAAGTTTTAGA+AGG - chr3_3:88267529-88267548 Msa0481890:CDS 20.0%
!!! AATTGTACTATTTTTGCTTA+TGG - chr3_3:88267556-88267575 Msa0481890:CDS 20.0%
!!! TAATGATTTTTATTGTAGAG+TGG - chr3_3:88267756-88267775 Msa0481890:intron 20.0%
!!! AATGATTTTTATTGTAGAGT+GGG - chr3_3:88267757-88267776 Msa0481890:intron 20.0%
!!! GTTTTTAGAATTGTATAATG+AGG - chr3_3:88267884-88267903 Msa0481890:CDS 20.0%
!!! AATAAAAGTTTGCTTACATT+AGG - chr3_3:88268483-88268502 Msa0481890:CDS 20.0%
!!! ATAAAAGTTTGCTTACATTA+GGG - chr3_3:88268484-88268503 Msa0481890:CDS 20.0%
!! TCATTAATGTATTGGATAAA+AGG + chr3_3:88268898-88268917 None:intergenic 20.0%
!! TACATGTATCATTAATGTAT+TGG + chr3_3:88268906-88268925 None:intergenic 20.0%
!! ATACATTAATGATACATGTA+TGG - chr3_3:88268906-88268925 Msa0481890:CDS 20.0%
!!! TTTATTTTCTCTGTTTTGAT+TGG - chr3_3:88270160-88270179 Msa0481890:intron 20.0%
!! CAATCAAAGAATGAATTAAA+GGG + chr3_3:88271059-88271078 None:intergenic 20.0%
!! ACAATCAAAGAATGAATTAA+AGG + chr3_3:88271060-88271079 None:intergenic 20.0%
!!! TTTTGAGATCTACTTTTTTT+TGG - chr3_3:88271528-88271547 Msa0481890:intron 20.0%
!!! TTTTTGTTGTATAATGTGTT+CGG - chr3_3:88272004-88272023 Msa0481890:intron 20.0%
!! ATAGAATAATGTCAGATTAT+AGG + chr3_3:88272334-88272353 None:intergenic 20.0%
!!! ATTCATATGAATTATTTTCC+CGG + chr3_3:88272915-88272934 None:intergenic 20.0%
!!! GCTCAAATAATAGTTATTTT+TGG - chr3_3:88273178-88273197 Msa0481890:five_prime_UTR 20.0%
!!! TTTTATCTATCTTATTCCAA+TGG - chr3_3:88273234-88273253 Msa0481890:five_prime_UTR 20.0%
! AAAATGTCTGGTAAAGAAAA+AGG - chr3_3:88267073-88267092 Msa0481890:three_prime_UTR 25.0%
! GAAAAAATGAACGAAATGAA+AGG + chr3_3:88267140-88267159 None:intergenic 25.0%
! GAATTAATTAATGGTAGACT+GGG - chr3_3:88267406-88267425 Msa0481890:intron 25.0%
!!! TTTGTTGCATTTTTTTGGTT+AGG - chr3_3:88267453-88267472 Msa0481890:intron 25.0%
!!! CATTTTTTTGGTTAGGTTTT+TGG - chr3_3:88267460-88267479 Msa0481890:intron 25.0%
! AGTAATAATCTACACATACA+TGG - chr3_3:88267709-88267728 Msa0481890:intron 25.0%
!! TGAGCTTTGTAATATTTGTT+AGG - chr3_3:88268434-88268453 Msa0481890:CDS 25.0%
!! GAGCTTTGTAATATTTGTTA+GGG - chr3_3:88268435-88268454 Msa0481890:CDS 25.0%
! TTCAAAAGTAAAAACCTGTA+TGG + chr3_3:88268549-88268568 None:intergenic 25.0%
! ATTTCAAGAAAAATACTGAC+AGG + chr3_3:88268844-88268863 None:intergenic 25.0%
!!! ACCTGCTTTTATATTCTAAT+TGG - chr3_3:88268981-88269000 Msa0481890:CDS 25.0%
! ACCAATTAGAATATAAAAGC+AGG + chr3_3:88268985-88269004 None:intergenic 25.0%
!!! GAGTTGATTTCATCATTTTT+TGG + chr3_3:88269017-88269036 None:intergenic 25.0%
! AAACGCATACATCAATATAA+GGG + chr3_3:88269474-88269493 None:intergenic 25.0%
!!! ATCAAGTTTGTTGCTTAAAT+CGG + chr3_3:88269719-88269738 None:intergenic 25.0%
! ATGTAATGACAATAAAGAGA+CGG + chr3_3:88269771-88269790 None:intergenic 25.0%
! ATTCGACATAACAACTTTAA+GGG - chr3_3:88269789-88269808 Msa0481890:CDS 25.0%
! TTCTCTACCTATATAATTAC+CGG + chr3_3:88270234-88270253 None:intergenic 25.0%
! ACAAATGTCAAACAATGAAT+TGG + chr3_3:88270559-88270578 None:intergenic 25.0%
! TAATGGAATATGACAAAACA+AGG + chr3_3:88271034-88271053 None:intergenic 25.0%
! GAATGAATTAAAGGGAATAA+TGG + chr3_3:88271051-88271070 None:intergenic 25.0%
! TTGCATTAACATATGTTGTT+TGG - chr3_3:88271305-88271324 Msa0481890:intron 25.0%
! ATATTACAACCAATGCAAAA+AGG - chr3_3:88271668-88271687 Msa0481890:CDS 25.0%
!!! GTTATTTCTCCTAGTTTTTT+TGG - chr3_3:88271798-88271817 Msa0481890:intron 25.0%
!! TGATGTTAATTTGGGATATA+TGG - chr3_3:88272031-88272050 Msa0481890:intron 25.0%
!! GATGTTAATTTGGGATATAT+GGG - chr3_3:88272032-88272051 Msa0481890:intron 25.0%
!! ATGTTAATTTGGGATATATG+GGG - chr3_3:88272033-88272052 Msa0481890:intron 25.0%
!! TCAATTGTAAGCTTTAGTTA+TGG - chr3_3:88272091-88272110 Msa0481890:CDS 25.0%
! TCGTTATCTCATTAATCAAT+AGG - chr3_3:88272137-88272156 Msa0481890:CDS 25.0%
! CATTATCGGTCAAATATATT+TGG + chr3_3:88272409-88272428 None:intergenic 25.0%
! GTTATATCTATGATATTTGC+AGG + chr3_3:88272432-88272451 None:intergenic 25.0%
! AACTTAAGAAATAGAAAGGA+TGG + chr3_3:88272492-88272511 None:intergenic 25.0%
!! AACTTTTCAGCAGAATTATA+TGG - chr3_3:88272695-88272714 Msa0481890:intron 25.0%
!!! TTATATGGTAGGTTATTTTG+TGG - chr3_3:88272710-88272729 Msa0481890:intron 25.0%
! CGAAATCTGGTTAATATTAA+AGG - chr3_3:88273094-88273113 Msa0481890:exon 25.0%
! GATTGAAAAAATAACACCAT+TGG + chr3_3:88273253-88273272 None:intergenic 25.0%
!!! TGGTGTTATTTTTTCAATCT+TGG - chr3_3:88273254-88273273 Msa0481890:five_prime_UTR 25.0%
!!! TGTTATTTTTTCAATCTTGG+TGG - chr3_3:88273257-88273276 Msa0481890:five_prime_UTR 25.0%
!!! AATTTTGCCATTGTCGTTTT+GGG + chr3_3:88266827-88266846 None:intergenic 30.0%
TTTCTTTCTCTTTCTCTTCT+GGG + chr3_3:88267001-88267020 None:intergenic 30.0%
! TTTTCTTTCTCTTTCTCTTC+TGG + chr3_3:88267002-88267021 None:intergenic 30.0%
TGCATTTCAAAATCTAACAC+TGG - chr3_3:88267200-88267219 Msa0481890:CDS 30.0%
GGAATTAATTAATGGTAGAC+TGG - chr3_3:88267405-88267424 Msa0481890:intron 30.0%
! ATTTTTGCTTATGGTCAAAC+CGG - chr3_3:88267565-88267584 Msa0481890:CDS 30.0%
! TTCCATGGTAAATGTTTTTC+CGG + chr3_3:88267593-88267612 None:intergenic 30.0%
! GGAAATTTCAAAGGTTAGTT+TGG - chr3_3:88267932-88267951 Msa0481890:CDS 30.0%
!! AATTTCAAAGGTTAGTTTGG+AGG - chr3_3:88267935-88267954 Msa0481890:CDS 30.0%
ATTTATACTCTTCTCGAAAG+AGG - chr3_3:88268053-88268072 Msa0481890:intron 30.0%
TTTATACTCTTCTCGAAAGA+GGG - chr3_3:88268054-88268073 Msa0481890:intron 30.0%
CTTTACTTAACAAACAATCC+AGG - chr3_3:88268102-88268121 Msa0481890:intron 30.0%
! TAATTAGTTCTTCACCTTCA+GGG + chr3_3:88268256-88268275 None:intergenic 30.0%
! TTAATTAGTTCTTCACCTTC+AGG + chr3_3:88268257-88268276 None:intergenic 30.0%
TAAGTGTGGTAAACTGAATT+TGG - chr3_3:88268274-88268293 Msa0481890:CDS 30.0%
TCAGAAAATATATCTCGTTC+CGG - chr3_3:88268311-88268330 Msa0481890:intron 30.0%
GAACATTAAAAATAAGCCAG+AGG - chr3_3:88268785-88268804 Msa0481890:CDS 30.0%
TCTTTCAGTCATGTATTTGA+TGG - chr3_3:88268872-88268891 Msa0481890:intron 30.0%
GATGAAATCAACTCTTATCA+AGG - chr3_3:88269023-88269042 Msa0481890:CDS 30.0%
ACTCTTATCAAGGATCTTTA+CGG - chr3_3:88269033-88269052 Msa0481890:intron 30.0%
GTAAGAAATCTAAGGATTCA+CGG + chr3_3:88269124-88269143 None:intergenic 30.0%
! AAATTTGTGATCCTTTTCAG+AGG - chr3_3:88269165-88269184 Msa0481890:intron 30.0%
GAAACGCATACATCAATATA+AGG + chr3_3:88269475-88269494 None:intergenic 30.0%
CACAATTGAATCTTATCAGA+AGG - chr3_3:88269537-88269556 Msa0481890:CDS 30.0%
CATTCGACATAACAACTTTA+AGG - chr3_3:88269788-88269807 Msa0481890:CDS 30.0%
TGTTAAAGTTCTGTAATGAC+TGG - chr3_3:88270009-88270028 Msa0481890:intron 30.0%
GTTAAAGTTCTGTAATGACT+GGG - chr3_3:88270010-88270029 Msa0481890:intron 30.0%
CATAGTTAACATTAACCCAA+TGG + chr3_3:88270037-88270056 None:intergenic 30.0%
GCTTCATTATTTGCGAAAAT+TGG - chr3_3:88270130-88270149 Msa0481890:intron 30.0%
CATTATTTGCGAAAATTGGT+AGG - chr3_3:88270134-88270153 Msa0481890:intron 30.0%
TATGTCTCCGGTAATTATAT+AGG - chr3_3:88270224-88270243 Msa0481890:intron 30.0%
!! TGTAGTGAACAATTTTCAAG+CGG - chr3_3:88270280-88270299 Msa0481890:CDS 30.0%
CTTATCATGAATTCCCAAAA+AGG + chr3_3:88270402-88270421 None:intergenic 30.0%
!! CTTTTTGGGAATTCATGATA+AGG - chr3_3:88270400-88270419 Msa0481890:intron 30.0%
! TTCTTAAAGCCTCTTTTTGT+TGG - chr3_3:88270488-88270507 Msa0481890:CDS 30.0%
! TCTTAAAGCCTCTTTTTGTT+GGG - chr3_3:88270489-88270508 Msa0481890:CDS 30.0%
AGGCAACAAAAAAAGGATTA+AGG + chr3_3:88270597-88270616 None:intergenic 30.0%
GTGTTGAAAACAATGAAAAG+TGG + chr3_3:88270837-88270856 None:intergenic 30.0%
!! TGAATTGACACTTTTTGCTA+GGG - chr3_3:88270961-88270980 Msa0481890:CDS 30.0%
!! TGATTTTAAGAAAGCTTACG+AGG - chr3_3:88271274-88271293 Msa0481890:intron 30.0%
! AACATATGTTGTTTGGAAGA+TGG - chr3_3:88271312-88271331 Msa0481890:intron 30.0%
!! TATATTTTTCTTGGCCTTCA+TGG - chr3_3:88271500-88271519 Msa0481890:CDS 30.0%
ATCTCAAAAATCATCCATGA+AGG + chr3_3:88271517-88271536 None:intergenic 30.0%
!!! TTTTTGGTTGTGTCATCTAA+TGG - chr3_3:88271544-88271563 Msa0481890:intron 30.0%
TTGTGTCATCTAATGGTTAT+TGG - chr3_3:88271551-88271570 Msa0481890:intron 30.0%
! TTTTTCTGCTTGTATGCAAA+AGG + chr3_3:88271704-88271723 None:intergenic 30.0%
TAACACTACAGGAATTAAAC+AGG + chr3_3:88271854-88271873 None:intergenic 30.0%
TTCGGCATATGATGTTAATT+TGG - chr3_3:88272022-88272041 Msa0481890:intron 30.0%
TCGGCATATGATGTTAATTT+GGG - chr3_3:88272023-88272042 Msa0481890:intron 30.0%
CAACGTGATATCAATTACTT+TGG - chr3_3:88272167-88272186 Msa0481890:CDS 30.0%
GATATCAATTACTTTGGTAC+AGG - chr3_3:88272173-88272192 Msa0481890:CDS 30.0%
ATGATATTTGCAGGCATTAT+CGG + chr3_3:88272423-88272442 None:intergenic 30.0%
AAATAGAAAGGATGGAATGA+TGG + chr3_3:88272484-88272503 None:intergenic 30.0%
! ATTCATGTGATCCTTTTTCT+TGG - chr3_3:88272528-88272547 Msa0481890:intron 30.0%
GAAAAAATACGCCAAGAAAA+AGG + chr3_3:88272542-88272561 None:intergenic 30.0%
TTTCAGCAGAATTATATGGT+AGG - chr3_3:88272699-88272718 Msa0481890:intron 30.0%
TGAATCTTCTTCTGATGTAA+AGG - chr3_3:88272930-88272949 Msa0481890:intron 30.0%
AGGATGTAATGTGATATCTA+AGG - chr3_3:88273114-88273133 Msa0481890:five_prime_UTR 30.0%
TCAAAAACCCAAAACGACAA+TGG - chr3_3:88266817-88266836 Msa0481890:three_prime_UTR 35.0%
!! CAATTTTGCCATTGTCGTTT+TGG + chr3_3:88266828-88266847 None:intergenic 35.0%
TGGCAAAATTGTGAAGACAA+AGG - chr3_3:88266837-88266856 Msa0481890:three_prime_UTR 35.0%
!! CCAGACATTTTCGATTAGTT+TGG + chr3_3:88267064-88267083 None:intergenic 35.0%
CCAAACTAATCGAAAATGTC+TGG - chr3_3:88267061-88267080 Msa0481890:three_prime_UTR 35.0%
CACTGGAATCGATAATTTGA+AGG - chr3_3:88267217-88267236 Msa0481890:CDS 35.0%
GAAATGATTAACCTTGTCGA+AGG + chr3_3:88267361-88267380 None:intergenic 35.0%
TACCGGAAAAACATTTACCA+TGG - chr3_3:88267588-88267607 Msa0481890:CDS 35.0%
GGAAAAACATTTACCATGGA+AGG - chr3_3:88267592-88267611 Msa0481890:CDS 35.0%
TTGGACGCAAAATTATACCT+TGG + chr3_3:88267632-88267651 None:intergenic 35.0%
CTGTTTATGCAGTAAAGCAT+TGG + chr3_3:88267651-88267670 None:intergenic 35.0%
!! CTAACCTTTGAAATTTCCTC+CGG + chr3_3:88267930-88267949 None:intergenic 35.0%
ACAGAAAAGAAACAATCACC+TGG + chr3_3:88268123-88268142 None:intergenic 35.0%
! AATTAGTTCTTCACCTTCAG+GGG + chr3_3:88268255-88268274 None:intergenic 35.0%
GGTGAAGAACTAATTAAGTG+TGG - chr3_3:88268260-88268279 Msa0481890:CDS 35.0%
TATCATGTACACTACATCAC+AGG - chr3_3:88268372-88268391 Msa0481890:intron 35.0%
ATCATGTACACTACATCACA+GGG - chr3_3:88268373-88268392 Msa0481890:intron 35.0%
!! TTTGATAACGCGTCATTCAA+TGG - chr3_3:88268571-88268590 Msa0481890:CDS 35.0%
CATGTAAGCATACAGCAAAA+GGG + chr3_3:88268611-88268630 None:intergenic 35.0%
TCATGTAAGCATACAGCAAA+AGG + chr3_3:88268612-88268631 None:intergenic 35.0%
GTTTACTTCGTGATTCACTT+GGG - chr3_3:88268667-88268686 Msa0481890:intron 35.0%
TTTACTTCGTGATTCACTTG+GGG - chr3_3:88268668-88268687 Msa0481890:intron 35.0%
TTCTTCTAAGCAATGAACAG+CGG + chr3_3:88268730-88268749 None:intergenic 35.0%
AGAAGAAACTTTGAGCACAT+TGG - chr3_3:88268743-88268762 Msa0481890:CDS 35.0%
CACATTGGATTATGCACATA+GGG - chr3_3:88268758-88268777 Msa0481890:CDS 35.0%
CAGGTGAAAAACAATGCTAT+AGG + chr3_3:88268966-88268985 None:intergenic 35.0%
GAACTGAGGTAAGAAATCTA+AGG + chr3_3:88269132-88269151 None:intergenic 35.0%
! AGTAGCATAAACCTCTGAAA+AGG + chr3_3:88269179-88269198 None:intergenic 35.0%
TATGCTACTCGTGAGAAAAA+TGG - chr3_3:88269190-88269209 Msa0481890:intron 35.0%
ATGCTACTCGTGAGAAAAAT+GGG - chr3_3:88269191-88269210 Msa0481890:intron 35.0%
AAATGGGGTCTATATTCCAA+AGG - chr3_3:88269207-88269226 Msa0481890:CDS 35.0%
TCCAAAGGAAAGATACTATC+AGG - chr3_3:88269222-88269241 Msa0481890:CDS 35.0%
TCCTGATAGTATCTTTCCTT+TGG + chr3_3:88269226-88269245 None:intergenic 35.0%
GAAACAAACCAAGACTAAGA+AGG + chr3_3:88269270-88269289 None:intergenic 35.0%
AATAGTCATATCGCTACAGT+TGG + chr3_3:88269292-88269311 None:intergenic 35.0%
! GTTACATAGACCAAAAGTGT+CGG + chr3_3:88269333-88269352 None:intergenic 35.0%
!! ACTTAGAGTAGTGGGTTAAA+TGG + chr3_3:88269451-88269470 None:intergenic 35.0%
TATAAGGGACTTAGAGTAGT+GGG + chr3_3:88269459-88269478 None:intergenic 35.0%
ATATAAGGGACTTAGAGTAG+TGG + chr3_3:88269460-88269479 None:intergenic 35.0%
TGTATGCGTTTCTTCTGTTA+AGG - chr3_3:88269483-88269502 Msa0481890:CDS 35.0%
AAACTTGAACAAGACTAGCA+AGG - chr3_3:88269834-88269853 Msa0481890:CDS 35.0%
TCGATATACCGTCAATGAAA+AGG - chr3_3:88269891-88269910 Msa0481890:CDS 35.0%
! GATGAACTCCTTTTCATTGA+CGG + chr3_3:88269902-88269921 None:intergenic 35.0%
ATATCTGAACAGAGAAAAGC+AGG - chr3_3:88269922-88269941 Msa0481890:CDS 35.0%
CTGTAATGTTCATTTGAGTG+AGG - chr3_3:88269983-88270002 Msa0481890:intron 35.0%
TGATTTAGAGAAAGCTCTTC+AGG - chr3_3:88270102-88270121 Msa0481890:CDS 35.0%
TATTTGCGAAAATTGGTAGG+TGG - chr3_3:88270137-88270156 Msa0481890:intron 35.0%
CATGAATTCCCAAAAAGGAA+TGG + chr3_3:88270397-88270416 None:intergenic 35.0%
ACAAAAAGCCCAACAAAAAG+AGG + chr3_3:88270500-88270519 None:intergenic 35.0%
!!! ATCCTTTTTTTGTTGCCTGT+AGG - chr3_3:88270599-88270618 Msa0481890:intron 35.0%
AAGAGAAAATGAAAGACCTG+AGG - chr3_3:88270637-88270656 Msa0481890:CDS 35.0%
AGAGAAAATGAAAGACCTGA+GGG - chr3_3:88270638-88270657 Msa0481890:CDS 35.0%
AAATGTTGTGCGTTTGCATA+AGG - chr3_3:88270692-88270711 Msa0481890:intron 35.0%
TTCTTCAATTGAATGACCGT+GGG + chr3_3:88270763-88270782 None:intergenic 35.0%
!! GTGAATTGACACTTTTTGCT+AGG - chr3_3:88270960-88270979 Msa0481890:CDS 35.0%
AAAGAGATTCAATCTTAGCG+TGG - chr3_3:88271133-88271152 Msa0481890:CDS 35.0%
TCTTAGCGTGGAACAAATAA+AGG - chr3_3:88271145-88271164 Msa0481890:CDS 35.0%
ATCTTGAAGAGTTTGTAGCA+CGG - chr3_3:88271222-88271241 Msa0481890:intron 35.0%
CATCTTGTTCTATTCTGTAC+AGG - chr3_3:88271361-88271380 Msa0481890:intron 35.0%
! AAGTCCATCTTGTCAGTTTT+TGG - chr3_3:88271456-88271475 Msa0481890:CDS 35.0%
GTCATCTAATGGTTATTGGT+TGG - chr3_3:88271555-88271574 Msa0481890:intron 35.0%
!! ACTCAAAGCTTGTTGATCTT+AGG - chr3_3:88271590-88271609 Msa0481890:intron 35.0%
!! CTCAAAGCTTGTTGATCTTA+GGG - chr3_3:88271591-88271610 Msa0481890:intron 35.0%
AAGAACAAGTCATTCTTCGA+TGG - chr3_3:88271625-88271644 Msa0481890:intron 35.0%
CAACCAATGCAAAAAGGAAA+TGG - chr3_3:88271674-88271693 Msa0481890:CDS 35.0%
GGATGTAGACCAAAAAAACT+AGG + chr3_3:88271810-88271829 None:intergenic 35.0%
AGTGTTAGAATGTGACTAAG+AGG + chr3_3:88271831-88271850 None:intergenic 35.0%
TAGTGTTAGTACTGCTCATT+CGG - chr3_3:88271866-88271885 Msa0481890:CDS 35.0%
ATGAGGCTGTAAATGAGTTA+GGG - chr3_3:88271913-88271932 Msa0481890:CDS 35.0%
CTCTGTCGCAAAAATATGTT+TGG + chr3_3:88271940-88271959 None:intergenic 35.0%
! GAGTTATATGGCATTAGCTT+TGG - chr3_3:88272068-88272087 Msa0481890:CDS 35.0%
ACATCTCAAGTGTATTTGCA+TGG + chr3_3:88272623-88272642 None:intergenic 35.0%
ATGTTTAGAGAGAATCACTC+AGG - chr3_3:88272639-88272658 Msa0481890:CDS 35.0%
TGTTTAGAGAGAATCACTCA+GGG - chr3_3:88272640-88272659 Msa0481890:CDS 35.0%
CATTAATTCAATTGGGTGAG+AGG + chr3_3:88272985-88273004 None:intergenic 35.0%
CTCTCACCCAATTGAATTAA+TGG - chr3_3:88272983-88273002 Msa0481890:intron 35.0%
TCACCCAATTGAATTAATGG+TGG - chr3_3:88272986-88273005 Msa0481890:intron 35.0%
CCACCACCATTAATTCAATT+GGG + chr3_3:88272992-88273011 None:intergenic 35.0%
ACCACCACCATTAATTCAAT+TGG + chr3_3:88272993-88273012 None:intergenic 35.0%
AGTTTGAAGAATGCGAAATC+TGG - chr3_3:88273081-88273100 Msa0481890:CDS 35.0%
TTGTGTCTAAATCCCATCTT+GGG - chr3_3:88273145-88273164 Msa0481890:five_prime_UTR 35.0%
GCTATATTTCATCCCAAGAT+GGG + chr3_3:88273160-88273179 None:intergenic 35.0%
AGCTATATTTCATCCCAAGA+TGG + chr3_3:88273161-88273180 None:intergenic 35.0%
! AGATCTACGACTCAACGTTT+TGG + chr3_3:88266896-88266915 None:intergenic 40.0%
ACGTTGAGTCGTAGATCTAA+AGG - chr3_3:88266898-88266917 Msa0481890:three_prime_UTR 40.0%
CGTTGAGTCGTAGATCTAAA+GGG - chr3_3:88266899-88266918 Msa0481890:three_prime_UTR 40.0%
! TTCAAGTTCTACTTCGTTGC+AGG - chr3_3:88267104-88267123 Msa0481890:three_prime_UTR 40.0%
!! GCTGTTTCTCAGAATATTGC+CGG - chr3_3:88267312-88267331 Msa0481890:CDS 40.0%
! AGTTCTCTTTGTTGTGCAGA+AGG + chr3_3:88267487-88267506 None:intergenic 40.0%
! GGTAAATGTTTTTCCGGTAC+CGG + chr3_3:88267587-88267606 None:intergenic 40.0%
! TCTTTTGCATTCTCCTTCCA+TGG + chr3_3:88267608-88267627 None:intergenic 40.0%
AGGAGAATGCAAAAGATCCA+AGG - chr3_3:88267612-88267631 Msa0481890:intron 40.0%
AAAATCTGCTTAACAGCCCT+CGG + chr3_3:88267819-88267838 None:intergenic 40.0%
!! GATTACTGATTTGCTTGCTC+CGG - chr3_3:88267908-88267927 Msa0481890:CDS 40.0%
AAAAAAGCAGCTGCCTCTTA+TGG - chr3_3:88267965-88267984 Msa0481890:CDS 40.0%
GTGTGGTAAACTGAATTTGG+TGG - chr3_3:88268277-88268296 Msa0481890:CDS 40.0%
! ACTGAATTTGGTGGATCTTG+CGG - chr3_3:88268286-88268305 Msa0481890:CDS 40.0%
TCATGTACACTACATCACAG+GGG - chr3_3:88268374-88268393 Msa0481890:intron 40.0%
ACCTTGGTCATATTCCATAC+AGG - chr3_3:88268532-88268551 Msa0481890:CDS 40.0%
ACCTGTATGGAATATGACCA+AGG + chr3_3:88268536-88268555 None:intergenic 40.0%
CGTTTACTTCGTGATTCACT+TGG - chr3_3:88268666-88268685 Msa0481890:intron 40.0%
TTACTTCGTGATTCACTTGG+GGG - chr3_3:88268669-88268688 Msa0481890:intron 40.0%
TCTTCTAAGCAATGAACAGC+GGG + chr3_3:88268729-88268748 None:intergenic 40.0%
GCACATTGGATTATGCACAT+AGG - chr3_3:88268757-88268776 Msa0481890:CDS 40.0%
CACAATCAACAACAAACCTC+TGG + chr3_3:88268804-88268823 None:intergenic 40.0%
GAAATTGAACGCCTTAAGTC+AGG - chr3_3:88269057-88269076 Msa0481890:intron 40.0%
AAAGCAACTCACCTGACTTA+AGG + chr3_3:88269071-88269090 None:intergenic 40.0%
TTGTCAACAATGCAGAACTG+AGG + chr3_3:88269146-88269165 None:intergenic 40.0%
TGCTACTCGTGAGAAAAATG+GGG - chr3_3:88269192-88269211 Msa0481890:intron 40.0%
TCAGGAAGAGATTGAGAAGA+AGG - chr3_3:88269240-88269259 Msa0481890:CDS 40.0%
AAGGTAGTCCTTCTTAGTCT+TGG - chr3_3:88269259-88269278 Msa0481890:CDS 40.0%
! TTCATCAAGACCGACACTTT+TGG - chr3_3:88269320-88269339 Msa0481890:intron 40.0%
CGTTTCTTCTGTTAAGGCTA+TGG - chr3_3:88269489-88269508 Msa0481890:CDS 40.0%
ATGTTTCAACCAGCAACTTG+AGG - chr3_3:88269654-88269673 Msa0481890:intron 40.0%
! TTCTCATATCCTCAAGTTGC+TGG + chr3_3:88269666-88269685 None:intergenic 40.0%
CAACAAACTTGATACCACTG+AGG - chr3_3:88269726-88269745 Msa0481890:intron 40.0%
ACAATGATATCAGACCTCAG+TGG + chr3_3:88269743-88269762 None:intergenic 40.0%
!! CTTTAGTTCTTCCTCTCTAC+TGG + chr3_3:88269866-88269885 None:intergenic 40.0%
ACAGAGAAAAGCAGGTATTC+AGG - chr3_3:88269930-88269949 Msa0481890:intron 40.0%
AACACATGCTTGATGAGCTA+GGG + chr3_3:88270074-88270093 None:intergenic 40.0%
AAACACATGCTTGATGAGCT+AGG + chr3_3:88270075-88270094 None:intergenic 40.0%
ACATCGTTGTCTGAACAGAA+CGG - chr3_3:88270344-88270363 Msa0481890:intron 40.0%
! AAGCTCTGCCATTCCTTTTT+GGG - chr3_3:88270386-88270405 Msa0481890:intron 40.0%
AGTGTCAACAACAAGAACAG+CGG + chr3_3:88270448-88270467 None:intergenic 40.0%
ATTCACTTGAGCTTCTTGTC+TGG - chr3_3:88270529-88270548 Msa0481890:intron 40.0%
!!! CTTTTTTTGTTGCCTGTAGG+CGG - chr3_3:88270602-88270621 Msa0481890:intron 40.0%
GGTGTATGTGTCTCATATTG+AGG - chr3_3:88270662-88270681 Msa0481890:CDS 40.0%
CTTCTTCAATTGAATGACCG+TGG + chr3_3:88270764-88270783 None:intergenic 40.0%
GAATCAGTTCCTTACAACTG+CGG - chr3_3:88270880-88270899 Msa0481890:intron 40.0%
AAATATTGAGCCAGCTTCTG+TGG + chr3_3:88270906-88270925 None:intergenic 40.0%
AGCTGTCTTTCAACACAACA+TGG - chr3_3:88270938-88270957 Msa0481890:CDS 40.0%
AAAGGAGATTTCTGAGCGAT+CGG - chr3_3:88271163-88271182 Msa0481890:intron 40.0%
TCTTGAAGAGTTTGTAGCAC+GGG - chr3_3:88271223-88271242 Msa0481890:intron 40.0%
CAATGCTCTCTGTTTGCATT+TGG + chr3_3:88271253-88271272 None:intergenic 40.0%
ATCGCCAAAAACTGACAAGA+TGG + chr3_3:88271463-88271482 None:intergenic 40.0%
!! CTGCCATTTCCTTTTTGCAT+TGG + chr3_3:88271680-88271699 None:intergenic 40.0%
ATAACACATACCTTTGCTGC+AGG + chr3_3:88271783-88271802 None:intergenic 40.0%
ATGAGCAGTACTAACACTAC+AGG + chr3_3:88271865-88271884 None:intergenic 40.0%
CATGAGGCTGTAAATGAGTT+AGG - chr3_3:88271912-88271931 Msa0481890:CDS 40.0%
TGAGGCTGTAAATGAGTTAG+GGG - chr3_3:88271914-88271933 Msa0481890:CDS 40.0%
! ATTTGGGATATATGGGGATG+CGG - chr3_3:88272039-88272058 Msa0481890:intron 40.0%
!!! GATTTTTTGCAGCAGTTCGA+TGG - chr3_3:88272283-88272302 Msa0481890:CDS 40.0%
! GAGTATTGTGGTCTGGATAT+TGG - chr3_3:88272307-88272326 Msa0481890:CDS 40.0%
CTTCAGCTGCAATTTGCAAA+TGG + chr3_3:88272366-88272385 None:intergenic 40.0%
! TGATTTGTGTTGTGTCTTGC+AGG - chr3_3:88272780-88272799 Msa0481890:intron 40.0%
GAGTCTATTGTACCCTTACT+TGG + chr3_3:88272853-88272872 None:intergenic 40.0%
CCCAATTGAATTAATGGTGG+TGG - chr3_3:88272989-88273008 Msa0481890:intron 40.0%
CTTGTGTCTAAATCCCATCT+TGG - chr3_3:88273144-88273163 Msa0481890:five_prime_UTR 40.0%
TGAAAATGAGAGCGGGGTAA+GGG + chr3_3:88266974-88266993 None:intergenic 45.0%
TGGGTGTGTGAAAATGAGAG+CGG + chr3_3:88266982-88267001 None:intergenic 45.0%
CGTAACTCGTCGTCACTAAA+CGG + chr3_3:88267243-88267262 None:intergenic 45.0%
TCGTTACAAGTCACCACTTG+CGG + chr3_3:88267276-88267295 None:intergenic 45.0%
AACCCTATCGATGTGTTTGC+CGG + chr3_3:88267334-88267353 None:intergenic 45.0%
! TAGGGTTTTCACCTTCGACA+AGG - chr3_3:88267347-88267366 Msa0481890:CDS 45.0%
TTATTGTAGAGTGGGCCGAA+TGG - chr3_3:88267765-88267784 Msa0481890:intron 45.0%
TATTGTAGAGTGGGCCGAAT+GGG - chr3_3:88267766-88267785 Msa0481890:intron 45.0%
! CAGATTTTTGACACGCTCGA+GGG - chr3_3:88267831-88267850 Msa0481890:intron 45.0%
TGCTCCGGAGGAAATTTCAA+AGG - chr3_3:88267923-88267942 Msa0481890:CDS 45.0%
CCTTTACCATCCTCCATAAG+AGG + chr3_3:88267981-88268000 None:intergenic 45.0%
CCTCTTATGGAGGATGGTAA+AGG - chr3_3:88267978-88267997 Msa0481890:intron 45.0%
CTTATGGAGGATGGTAAAGG+TGG - chr3_3:88267981-88268000 Msa0481890:intron 45.0%
AAAGGTGGAGTTCTTGTGAG+AGG - chr3_3:88267996-88268015 Msa0481890:intron 45.0%
AAGGTGGAGTTCTTGTGAGA+GGG - chr3_3:88267997-88268016 Msa0481890:intron 45.0%
! AGTTTCTGCAGTGCGTCTTT+TGG + chr3_3:88268084-88268103 None:intergenic 45.0%
ATCAAAGAAGCAACCCCTGA+AGG - chr3_3:88268239-88268258 Msa0481890:CDS 45.0%
! CTGAATTTGGTGGATCTTGC+GGG - chr3_3:88268287-88268306 Msa0481890:CDS 45.0%
CGCTAGGGAGGTAATACATT+CGG - chr3_3:88268334-88268353 Msa0481890:intron 45.0%
TGTCGCTATAATGCACGTCT+TGG + chr3_3:88268700-88268719 None:intergenic 45.0%
TTCTAAGCAATGAACAGCGG+GGG + chr3_3:88268727-88268746 None:intergenic 45.0%
CTTCTAAGCAATGAACAGCG+GGG + chr3_3:88268728-88268747 None:intergenic 45.0%
GCTGATCAGATTGAGCAGAT+GGG - chr3_3:88269511-88269530 Msa0481890:CDS 45.0%
GCATTACAGAGACAACAAGC+AGG + chr3_3:88269618-88269637 None:intergenic 45.0%
TCTGTAATGACTGGGACCAT+TGG - chr3_3:88270018-88270037 Msa0481890:intron 45.0%
CTGTAATGACTGGGACCATT+GGG - chr3_3:88270019-88270038 Msa0481890:intron 45.0%
GCAAAGAGAACCAACCTTCT+GGG + chr3_3:88270312-88270331 None:intergenic 45.0%
TGCAAAGAGAACCAACCTTC+TGG + chr3_3:88270313-88270332 None:intergenic 45.0%
GAACAGAACGGACATCTACA+AGG - chr3_3:88270356-88270375 Msa0481890:intron 45.0%
! GAAGCTCTGCCATTCCTTTT+TGG - chr3_3:88270385-88270404 Msa0481890:intron 45.0%
AACAACAAGAACAGCGGCTT+TGG + chr3_3:88270442-88270461 None:intergenic 45.0%
CGCCTACAGGCAACAAAAAA+AGG + chr3_3:88270604-88270623 None:intergenic 45.0%
GAAAATGAAAGACCTGAGGG+CGG - chr3_3:88270641-88270660 Msa0481890:CDS 45.0%
TTCAATTGAATGACCGTGGG+AGG + chr3_3:88270760-88270779 None:intergenic 45.0%
GGAGCAATCAAAATCCGAGT+CGG - chr3_3:88271382-88271401 Msa0481890:CDS 45.0%
AGCAATGAGTTTCTCCGACT+CGG + chr3_3:88271399-88271418 None:intergenic 45.0%
!! TGGTTATTGGTTGGTCTTGC+AGG - chr3_3:88271564-88271583 Msa0481890:intron 45.0%
CTTGTTGATCTTAGGGAGAG+TGG - chr3_3:88271598-88271617 Msa0481890:intron 45.0%
! AGTACTGCTCATTCGGCTTT+TGG - chr3_3:88271873-88271892 Msa0481890:CDS 45.0%
ACAAGTGAAGAGGACACATG+AGG - chr3_3:88271896-88271915 Msa0481890:CDS 45.0%
TTGCGACAGAGTCACTTATC+AGG - chr3_3:88271949-88271968 Msa0481890:CDS 45.0%
AGAGTCACTTATCAGGTGTG+TGG - chr3_3:88271956-88271975 Msa0481890:CDS 45.0%
! TTTGGGATATATGGGGATGC+GGG - chr3_3:88272040-88272059 Msa0481890:intron 45.0%
GTTCTTTGCCACATCTTCCT+CGG + chr3_3:88272257-88272276 None:intergenic 45.0%
! CAGTTCGATGGTGAGTATTG+TGG - chr3_3:88272295-88272314 Msa0481890:CDS 45.0%
TTCACGTTCTTCTGCAGATG+TGG + chr3_3:88272568-88272587 None:intergenic 45.0%
AAGCTGCTTCCATTGAACAC+AGG - chr3_3:88272664-88272683 Msa0481890:CDS 45.0%
AGCTGCTTCCATTGAACACA+GGG - chr3_3:88272665-88272684 Msa0481890:CDS 45.0%
TTCACATGCCCTGTGTTCAA+TGG + chr3_3:88272676-88272695 None:intergenic 45.0%
!! CTTACTGGTGTTGTACCACT+AGG + chr3_3:88272814-88272833 None:intergenic 45.0%
AAGAAGGGCTTCAATTGGCA+AGG + chr3_3:88272884-88272903 None:intergenic 45.0%
TCCTCAAGAAGGGCTTCAAT+TGG + chr3_3:88272889-88272908 None:intergenic 45.0%
AAGCCCTTCTTGAGGAATTC+CGG - chr3_3:88272893-88272912 Msa0481890:CDS 45.0%
TTCCCGGAATTCCTCAAGAA+GGG + chr3_3:88272899-88272918 None:intergenic 45.0%
TTTCCCGGAATTCCTCAAGA+AGG + chr3_3:88272900-88272919 None:intergenic 45.0%
GGAGAACGTGGAATAAGAGA+CGG + chr3_3:88272964-88272983 None:intergenic 45.0%
! GTAAGGGAATGGTAGCGTTC+GGG + chr3_3:88266958-88266977 None:intergenic 50.0%
! GGTAAGGGAATGGTAGCGTT+CGG + chr3_3:88266959-88266978 None:intergenic 50.0%
GTGAAAATGAGAGCGGGGTA+AGG + chr3_3:88266975-88266994 None:intergenic 50.0%
GGTGTGTGAAAATGAGAGCG+GGG + chr3_3:88266980-88266999 None:intergenic 50.0%
GGGTGTGTGAAAATGAGAGC+GGG + chr3_3:88266981-88267000 None:intergenic 50.0%
TTGCCGGCAAACACATCGAT+AGG - chr3_3:88267328-88267347 Msa0481890:CDS 50.0%
TGCCGGCAAACACATCGATA+GGG - chr3_3:88267329-88267348 Msa0481890:CDS 50.0%
GCTTATGGTCAAACCGGTAC+CGG - chr3_3:88267571-88267590 Msa0481890:CDS 50.0%
ATTGTAGAGTGGGCCGAATG+GGG - chr3_3:88267767-88267786 Msa0481890:intron 50.0%
AGAAGCAGGAGTGATTCCGA+GGG - chr3_3:88267800-88267819 Msa0481890:intron 50.0%
! GCAGATTTTTGACACGCTCG+AGG - chr3_3:88267830-88267849 Msa0481890:intron 50.0%
!! TACTGATTTGCTTGCTCCGG+AGG - chr3_3:88267911-88267930 Msa0481890:CDS 50.0%
AAAGCAGCTGCCTCTTATGG+AGG - chr3_3:88267968-88267987 Msa0481890:CDS 50.0%
TGGAGTTCTTGTGAGAGGGT+TGG - chr3_3:88268001-88268020 Msa0481890:intron 50.0%
AGTTCTTGTGAGAGGGTTGG+AGG - chr3_3:88268004-88268023 Msa0481890:intron 50.0%
CAGGGGTTGCTTCTTTGATG+TGG + chr3_3:88268238-88268257 None:intergenic 50.0%
ATATATCTCGTTCCGGCGCT+AGG - chr3_3:88268318-88268337 Msa0481890:intron 50.0%
TATATCTCGTTCCGGCGCTA+GGG - chr3_3:88268319-88268338 Msa0481890:intron 50.0%
ATGTATTACCTCCCTAGCGC+CGG + chr3_3:88268333-88268352 None:intergenic 50.0%
GCGAGTGATTAATGCCCTTG+TGG - chr3_3:88268506-88268525 Msa0481890:CDS 50.0%
! ATGACCAAGGTGCTCCACAA+GGG + chr3_3:88268523-88268542 None:intergenic 50.0%
! TATGACCAAGGTGCTCCACA+AGG + chr3_3:88268524-88268543 None:intergenic 50.0%
GGCTGATCAGATTGAGCAGA+TGG - chr3_3:88269510-88269529 Msa0481890:CDS 50.0%
GAACGGACATCTACAAGGTG+TGG - chr3_3:88270361-88270380 Msa0481890:intron 50.0%
TCAAATCGATAGCCGCCTAC+AGG + chr3_3:88270617-88270636 None:intergenic 50.0%
AAGCTCAGATGCATCGTTGG+AGG - chr3_3:88270716-88270735 Msa0481890:intron 50.0%
TCATCTGCCATATCCTCCCA+CGG - chr3_3:88270744-88270763 Msa0481890:intron 50.0%
TGAATGACCGTGGGAGGATA+TGG + chr3_3:88270754-88270773 None:intergenic 50.0%
CGATGGACATGTGTCATCAG+TGG - chr3_3:88271642-88271661 Msa0481890:CDS 50.0%
!! TGCAGCAAAGCATTGCCGTA+TGG - chr3_3:88271750-88271769 Msa0481890:intron 50.0%
!! AGCAAAGCATTGCCGTATGG+AGG - chr3_3:88271753-88271772 Msa0481890:intron 50.0%
! CGGCTTTTGGACAAGTGAAG+AGG - chr3_3:88271886-88271905 Msa0481890:CDS 50.0%
GTCACTTATCAGGTGTGTGG+TGG - chr3_3:88271959-88271978 Msa0481890:CDS 50.0%
TTGGGATATATGGGGATGCG+GGG - chr3_3:88272041-88272060 Msa0481890:intron 50.0%
ATGCGGGGGAGTGAGTTATA+TGG - chr3_3:88272056-88272075 Msa0481890:intron 50.0%
! CGATGGTGAGTATTGTGGTC+TGG - chr3_3:88272300-88272319 Msa0481890:CDS 50.0%
TTGCAGGACTATGAGCCTAG+TGG - chr3_3:88272796-88272815 Msa0481890:intron 50.0%
ACCAGTAAGATGTGAGCCTG+AGG - chr3_3:88272825-88272844 Msa0481890:CDS 50.0%
ACCTCAGGCTCACATCTTAC+TGG + chr3_3:88272829-88272848 None:intergenic 50.0%
TGAGCCTGAGGTTCCAAGTA+AGG - chr3_3:88272837-88272856 Msa0481890:CDS 50.0%
GAGCCTGAGGTTCCAAGTAA+GGG - chr3_3:88272838-88272857 Msa0481890:CDS 50.0%
GTACCCTTACTTGGAACCTC+AGG + chr3_3:88272844-88272863 None:intergenic 50.0%
GCCAATTGAAGCCCTTCTTG+AGG - chr3_3:88272885-88272904 Msa0481890:CDS 50.0%
AGCCCTTCTTGAGGAATTCC+GGG - chr3_3:88272894-88272913 Msa0481890:CDS 50.0%
AATTGGGTGAGAGGAGAACG+TGG + chr3_3:88272976-88272995 None:intergenic 50.0%
! GGTGGTGGTATCAACTTGCT+CGG - chr3_3:88273004-88273023 Msa0481890:intron 50.0%
ACTTGCTCGGTTGTCTGTTG+TGG - chr3_3:88273017-88273036 Msa0481890:intron 50.0%
ATGAGAGCGGGGTAAGGGAA+TGG + chr3_3:88266969-88266988 None:intergenic 55.0%
TCTGGAGGCAACTCCCCATT+CGG + chr3_3:88267783-88267802 None:intergenic 55.0%
GGAATCACTCCTGCTTCTGG+AGG + chr3_3:88267798-88267817 None:intergenic 55.0%
CTCGGAATCACTCCTGCTTC+TGG + chr3_3:88267801-88267820 None:intergenic 55.0%
CAGAAGCAGGAGTGATTCCG+AGG - chr3_3:88267799-88267818 Msa0481890:intron 55.0%
CAGCTGCCTCTTATGGAGGA+TGG - chr3_3:88267972-88267991 Msa0481890:CDS 55.0%
TAGGGTCGTGCTAGAGAAGC+TGG - chr3_3:88268453-88268472 Msa0481890:CDS 55.0%
! AATGCCCTTGTGGAGCACCT+TGG - chr3_3:88268516-88268535 Msa0481890:CDS 55.0%
! CAAGGTGCTTGCCAGTAGAG+AGG - chr3_3:88269852-88269871 Msa0481890:CDS 55.0%
TCAAGCGGAACTTGCCCAGA+AGG - chr3_3:88270295-88270314 Msa0481890:CDS 55.0%
GGCAAGCTCAGATGCATCGT+TGG - chr3_3:88270713-88270732 Msa0481890:intron 55.0%
CTTCTGTGGCCGCAGTTGTA+AGG + chr3_3:88270892-88270911 None:intergenic 55.0%
!! GCTGCAGGAGTACCTCCATA+CGG + chr3_3:88271768-88271787 None:intergenic 55.0%
!! TGGAGGTACTCCTGCAGCAA+AGG - chr3_3:88271770-88271789 Msa0481890:intron 55.0%
TGGGATATATGGGGATGCGG+GGG - chr3_3:88272042-88272061 Msa0481890:intron 55.0%
CCTCTGCAACATGCTGCACA+TGG + chr3_3:88272213-88272232 None:intergenic 55.0%
CCATGTGCAGCATGTTGCAG+AGG - chr3_3:88272210-88272229 Msa0481890:CDS 55.0%
CGTTCTTCTGCAGATGTGGC+TGG + chr3_3:88272564-88272583 None:intergenic 55.0%
! TTTTGGCAACTCCTCCCCCA+TGG - chr3_3:88273195-88273214 Msa0481890:five_prime_UTR 55.0%
TTTGGCAACTCCTCCCCCAT+GGG - chr3_3:88273196-88273215 Msa0481890:five_prime_UTR 55.0%
ACGAAGCAATGCGCCGCAAG+TGG - chr3_3:88267260-88267279 Msa0481890:CDS 60.0%
GCGGAACTTGCCCAGAAGGT+TGG - chr3_3:88270299-88270318 Msa0481890:CDS 60.0%
GAGACACATACACCGCCCTC+AGG + chr3_3:88270656-88270675 None:intergenic 60.0%
ACAACTGCGGCCACAGAAGC+TGG - chr3_3:88270893-88270912 Msa0481890:intron 60.0%
AGCAGCAGCCGAGGAAGATG+TGG - chr3_3:88272246-88272265 Msa0481890:CDS 60.0%
TTGGCAACTCCTCCCCCATG+GGG - chr3_3:88273197-88273216 Msa0481890:five_prime_UTR 60.0%
AACTCCTCCCCCATGGGGAA+GGG - chr3_3:88273202-88273221 Msa0481890:five_prime_UTR 60.0%
ATACACCGCCCCTTCCCCAT+GGG + chr3_3:88273214-88273233 None:intergenic 60.0%
AATACACCGCCCCTTCCCCA+TGG + chr3_3:88273215-88273234 None:intergenic 60.0%
GGGGAGTTGCCTCCAGAAGC+AGG - chr3_3:88267786-88267805 Msa0481890:intron 65.0%
ATCTCGTTCCGGCGCTAGGG+AGG - chr3_3:88268322-88268341 Msa0481890:intron 65.0%
TTCTGCACGAGCAGCAGCCG+AGG - chr3_3:88272237-88272256 Msa0481890:CDS 65.0%
CAACTCCTCCCCCATGGGGA+AGG - chr3_3:88273201-88273220 Msa0481890:five_prime_UTR 65.0%
ACTCCTCCCCCATGGGGAAG+GGG - chr3_3:88273203-88273222 Msa0481890:five_prime_UTR 65.0%
TACACCGCCCCTTCCCCATG+GGG + chr3_3:88273213-88273232 None:intergenic 65.0%
ACACCGCCCCTTCCCCATGG+GGG + chr3_3:88273212-88273231 None:intergenic 70.0%
CCTCCCCCATGGGGAAGGGG+CGG - chr3_3:88273206-88273225 Msa0481890:five_prime_UTR 75.0%
! CCGCCCCTTCCCCATGGGGG+AGG + chr3_3:88273209-88273228 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 88266806 88273381 88266806 ID=Msa0481890;Name=Msa0481890
chr3_3 mRNA 88266806 88273381 88266806 ID=Msa0481890-mRNA-1;Parent=Msa0481890;Name=Msa0481890-mRNA-1;_AED=0.12;_eAED=0.12;_QI=270|1|1|1|1|1|23|379|1007
chr3_3 exon 88266806 88267385 88266806 ID=Msa0481890-mRNA-1:exon:25692;Parent=Msa0481890-mRNA-1
chr3_3 exon 88267471 88267622 88267471 ID=Msa0481890-mRNA-1:exon:25691;Parent=Msa0481890-mRNA-1
chr3_3 exon 88267883 88267992 88267883 ID=Msa0481890-mRNA-1:exon:25690;Parent=Msa0481890-mRNA-1
chr3_3 exon 88268217 88268318 88268217 ID=Msa0481890-mRNA-1:exon:25689;Parent=Msa0481890-mRNA-1
chr3_3 exon 88268396 88268601 88268396 ID=Msa0481890-mRNA-1:exon:25688;Parent=Msa0481890-mRNA-1
chr3_3 exon 88268721 88268804 88268721 ID=Msa0481890-mRNA-1:exon:25687;Parent=Msa0481890-mRNA-1
chr3_3 exon 88268892 88269050 88268892 ID=Msa0481890-mRNA-1:exon:25686;Parent=Msa0481890-mRNA-1
chr3_3 exon 88269193 88269300 88269193 ID=Msa0481890-mRNA-1:exon:25685;Parent=Msa0481890-mRNA-1
chr3_3 exon 88269405 88269566 88269405 ID=Msa0481890-mRNA-1:exon:25684;Parent=Msa0481890-mRNA-1
chr3_3 exon 88269766 88269941 88269766 ID=Msa0481890-mRNA-1:exon:25683;Parent=Msa0481890-mRNA-1
chr3_3 exon 88270036 88270122 88270036 ID=Msa0481890-mRNA-1:exon:25682;Parent=Msa0481890-mRNA-1
chr3_3 exon 88270244 88270355 88270244 ID=Msa0481890-mRNA-1:exon:25681;Parent=Msa0481890-mRNA-1
chr3_3 exon 88270440 88270520 88270440 ID=Msa0481890-mRNA-1:exon:25680;Parent=Msa0481890-mRNA-1
chr3_3 exon 88270629 88270682 88270629 ID=Msa0481890-mRNA-1:exon:25679;Parent=Msa0481890-mRNA-1
chr3_3 exon 88270926 88271002 88270926 ID=Msa0481890-mRNA-1:exon:25678;Parent=Msa0481890-mRNA-1
chr3_3 exon 88271109 88271178 88271109 ID=Msa0481890-mRNA-1:exon:25677;Parent=Msa0481890-mRNA-1
chr3_3 exon 88271381 88271537 88271381 ID=Msa0481890-mRNA-1:exon:25676;Parent=Msa0481890-mRNA-1
chr3_3 exon 88271634 88271731 88271634 ID=Msa0481890-mRNA-1:exon:25675;Parent=Msa0481890-mRNA-1
chr3_3 exon 88271844 88271982 88271844 ID=Msa0481890-mRNA-1:exon:25674;Parent=Msa0481890-mRNA-1
chr3_3 exon 88272064 88272413 88272064 ID=Msa0481890-mRNA-1:exon:25673;Parent=Msa0481890-mRNA-1
chr3_3 exon 88272554 88272712 88272554 ID=Msa0481890-mRNA-1:exon:25672;Parent=Msa0481890-mRNA-1
chr3_3 exon 88272819 88272948 88272819 ID=Msa0481890-mRNA-1:exon:25671;Parent=Msa0481890-mRNA-1
chr3_3 exon 88273062 88273381 88273062 ID=Msa0481890-mRNA-1:exon:25670;Parent=Msa0481890-mRNA-1
chr3_3 five_prime_UTR 88273112 88273381 88273112 ID=Msa0481890-mRNA-1:five_prime_utr;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88273062 88273111 88273062 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88272819 88272948 88272819 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88272554 88272712 88272554 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88272064 88272413 88272064 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88271844 88271982 88271844 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88271634 88271731 88271634 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88271381 88271537 88271381 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88271109 88271178 88271109 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88270926 88271002 88270926 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88270629 88270682 88270629 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88270440 88270520 88270440 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88270244 88270355 88270244 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88270036 88270122 88270036 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88269766 88269941 88269766 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88269405 88269566 88269405 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88269193 88269300 88269193 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88268892 88269050 88268892 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88268721 88268804 88268721 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88268396 88268601 88268396 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88268217 88268318 88268217 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88267883 88267992 88267883 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88267471 88267622 88267471 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 CDS 88267185 88267385 88267185 ID=Msa0481890-mRNA-1:cds;Parent=Msa0481890-mRNA-1
chr3_3 three_prime_UTR 88266806 88267184 88266806 ID=Msa0481890-mRNA-1:three_prime_utr;Parent=Msa0481890-mRNA-1
Gene Sequence

>Msa0481890

ATGTCTGGTAAAGAAAAAGGTGTTAACGTTCAAGTTCTACTTCGTTGCAGGCCGTTTAGTGACGACGAGTTACGAAGCAATGCGCCGCAAGTGGTGACTTGTAACGATTACAGTAGAGAAGTTGCTGTTTCTCAGAATATTGCCGGCAAACACATCGATAGGGTTTTCACCTTCGACAAGGTTTTTGGTCCTTCTGCACAACAAAGAGAACTTTATGAACAAGCTGTTACACCGATAGTAAATGAAGTTTTAGAAGGATTTAATTGTACTATTTTTGCTTATGGTCAAACCGGTACCGGAAAAACATTTACCATGGAAGGAGAATGCAAAAGATCCAAGAGTGGGCCGAATGGGGAGTTGCCTCCAGAAGCAGGAGTGATTCCGAGGGCTGTTAAGCAGATTTTTGACACGCTCGAGGGTCAGAATGCTGAGTATAGTGTGAAAGTTACGTTTTTAGAATTGTATAATGAGGAGATTACTGATTTGCTTGCTCCGGAGGAAATTTCAAAGGTTAGTTTGGAGGAGAAGCAAAAAAAGCAGCTGCCTCTTATGGAGGATGGTAAAGGTGGAGTTCTTGTGAGAGGGTTGGAGGAAGAAATTGTGACGTGTGCGAGTGAAATTTATACTCTTCTCGAAAGAGGGTCTTCCAAAAGACGCACTGCAGAAACTTTACTTAACAAACAATCCAGTCGTTCACATTCGTTGTTTTCAATTACAATCCACATCAAAGAAGCAACCCCTGAAGGTGAAGAACTAATTAAGTGTGGTAAACTGAATTTGGTGGATCTTGCGGGTTCAGAAAATATATCTCGTTCCGGCGCTAGGGAGGGTCGTGCTAGAGAAGCTGGAGAGATTAATAAAAGTTTGCTTACATTAGGGCGAGTGATTAATGCCCTTGTGGAGCACCTTGGTCATATTCCATACAGGGATAGCAAGTTGACTCGTTTACTTCGTGATTCACTTGGGGGAAGAACCAAGACGTGCATTATAGCGACAGTATCCCCCGCTGTTCATTGCTTAGAAGAAACTTTGAGCACATTGGATTATGCACATAGGGCAAAGAACATTAAAAATAAGCCAGAGGTCAACCAAAAAATGATGAAATCAACTCTTATCAAGGATCTTTACGGTGAAATTGAACGCCTTAAGTCAGAGGTTTATGCTACTCGTGAGAAAAATGGGGTCTATATTCCAAAGGAAAGATACTATCAGGAAGAGATTGAGAAGAAGGCTATGGCTGATCAGATTGAGCAGATGGGCATCACAATTGAATCTTATCAGAAGCAACTTGAGGATATGAGAAACAAGTATGATGATCAAGTTCGTCAGTGCTCCGATTTAAGCAACAAACTTGATACCACTGAGAAAAACTTGAACAAGACTAGCAAGGTGCTTGCCAGTAGAGAGGAAGAACTAAAGAAGTGTCGATATACCGTCAATGAAAAGGAGTTCATCATATCTGAACAGAGAAAAGCAGAAAATGCCCTAGCTCATCAAGCATGTGTTTTACGAGCTGATTTAGAGAAAGCTCTTCAGGATAATGCTTCATTATTTGCGAAAATTGGTAGAGAAGATAAACTCAGCTCAGATAATAGAGCTGTAGTGAACAATTTTCAAGCGGAACTTGCCCAGAAGGTTGGTTCTCTTTGCAACACTGTTACAACATCGTTGTCTGAACAGAACGGACATCTACAAGGTGTGGAGAAGCTCTGCCATTCCTTTTTGGGAATTCATGATAAGGCGGCTATCGATTTGAAAGAGAAAATGAAAGACCTGAGGGCGGTGTATGTGTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCATAAGGCAAGCTCAGATGCATCGTTGGAGGAGTTATCATCTGCCATATCCTCCCACGGTCATTCAATTGAAGAATTCCTTACAACTGCGGCCACAGAAGCTGGCTCAATATTTGACGAGCTTCAGAGCTGTCTTTCAACACAACATGGTGAATTGACACTTTTTGCTAGGGAAGTACGCAATAGATTCAATCTTAGCGTGGAACAAATAAAGGAGATTTCTGAGCGATCGGAAGAATTAGTTGAAAAGCTTTTTGAAGAATCAAAAAATCTTGAAGAGTTTGTAGCACGGGCTGACCAAATGCAAACAGAGAGCATTGATGATTTTAAGAAAGCTTACGAGGAGCAATCAAAATCCGAGTCGGAGAAACTCATTGCTGATATGACTAGCTTGATTTCTGATCACATTCGTCGTCAAGTCCATCTTGTAGACTCAAAGCTTGTTGATCTTAGGGAGAGTGGCATAAAGAACAAGTCATTCTTCGATGGACATGTGTCATCAGTGGAAGATATTACAACCAATGCAAAAAGGAAATGGCAGTCCTTTTGCATACAAGCAGAAAAAGACGCAAAAGATACTGCTGATTACTCTGCAGCAAAGCATTGCCGTATGGAGGTACTCCTGCAGCAAAGTGTTAGTACTGCTCATTCGGCTTTTGGACAAGTGAAGAGGACACATGAGGCTGTAAATGAGTTAGGGGCCAAACATATTTTTGCGACAGAGTCACTTATCAGGAACGCTTGTGAGAGCCATGTGCAGCATGTTGCAGAGGTCAATTCTGCACGAGCAGCAGCCGAGGAAGATGTGGCAAAGAACACTGATGATTTTTTGCAGCAGTTCGATGCCACATCTGCAGAAGAACGTGAATCTGTATGTAGCGTCGTAAATGTTGTGAAAAGCCATGCAAATACACTTGAGATGTTTAGAGAGAATCACTCAGGGCAAGCTGCTTCCATTGAACACAGGGCATGTGAAACTTTTCAGCAGAATTATATGGACTATGAGCCTAGTGGTACAACACCAGTAAGATGTGAGCCTGAGGTTCCAAGTAAGGGTACAATAGACTCTCTTCGAACCTTGCCAATTGAAGCCCTTCTTGAGGAATTCCGGGAAAATAATTCATATGAATCTTCTTCTGATGTAAAGGAGTTGAAACCGTCTCTTATTCCACGTTCTCCTCTCACCCAATTGAATTAA

Protein sequence

>Msa0481890

MSGKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYSREVAVSQNIAGKHIDRVFTFDKVFGPSAQQRELYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTFTMEGECKRSKSGPNGELPPEAGVIPRAVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEEISKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTCASEIYTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKSEVYATREKNGVYIPKERYYQEEIEKKAMADQIEQMGITIESYQKQLEDMRNKYDDQVRQCSDLSNKLDTTEKNLNKTSKVLASREEELKKCRYTVNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFAKIGREDKLSSDNRAVVNNFQAELAQKVGSLCNTVTTSLSEQNGHLQGVEKLCHSFLGIHDKAAIDLKEKMKDLRAVYVSHIEAVQNVVRLHKASSDASLEELSSAISSHGHSIEEFLTTAATEAGSIFDELQSCLSTQHGELTLFAREVRNRFNLSVEQIKEISERSEELVEKLFEESKNLEEFVARADQMQTESIDDFKKAYEEQSKSESEKLIADMTSLISDHIRRQVHLVDSKLVDLRESGIKNKSFFDGHVSSVEDITTNAKRKWQSFCIQAEKDAKDTADYSAAKHCRMEVLLQQSVSTAHSAFGQVKRTHEAVNELGAKHIFATESLIRNACESHVQHVAEVNSARAAAEEDVAKNTDDFLQQFDATSAEERESVCSVVNVVKSHANTLEMFRENHSGQAASIEHRACETFQQNYMDYEPSGTTPVRCEPEVPSKGTIDSLRTLPIEALLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN*