AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0709440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709440 MtrunA17_Chr7g0266631 99.206 1007 8 0 1 1007 1 1007 0.0 2058
Msa0709440 MtrunA17_Chr1g0178411 75.896 1004 241 1 4 1007 8 1010 0.0 1580
Msa0709440 MtrunA17_Chr2g0327581 48.617 1012 506 6 4 1007 44 1049 0.0 906
Msa0709440 MtrunA17_Chr1g0182151 42.240 973 552 6 3 972 48 1013 0.0 726
Msa0709440 MtrunA17_Chr3g0132921 38.287 397 206 12 9 390 9 381 5.79e-72 248
Msa0709440 MtrunA17_Chr4g0069141 40.898 401 202 10 9 398 153 529 9.47e-70 255
Msa0709440 MtrunA17_Chr4g0045381 40.404 396 191 9 9 391 193 556 4.30e-68 250
Msa0709440 MtrunA17_Chr1g0193221 36.406 434 229 9 10 430 4 403 5.96e-68 248
Msa0709440 MtrunA17_Chr5g0427481 38.000 400 212 10 10 395 18 395 2.62e-67 246
Msa0709440 MtrunA17_Chr3g0134191 38.519 405 204 10 10 388 9 394 3.26e-67 244
Msa0709440 MtrunA17_Chr1g0152231 42.442 344 165 6 56 389 46 366 1.26e-66 240
Msa0709440 MtrunA17_Chr4g0053211 37.470 411 202 13 9 386 12 400 7.60e-66 241
Msa0709440 MtrunA17_Chr3g0122121 36.946 406 210 9 10 394 99 479 1.20e-65 241
Msa0709440 MtrunA17_Chr2g0322291 38.539 397 210 7 9 394 88 461 2.84e-65 241
Msa0709440 MtrunA17_Chr1g0153061 37.284 405 209 11 10 388 9 394 2.57e-64 236
Msa0709440 MtrunA17_Chr7g0258991 38.363 391 187 11 9 386 73 422 3.54e-62 229
Msa0709440 MtrunA17_Chr8g0377731 39.143 350 181 8 56 387 91 426 5.43e-59 221
Msa0709440 MtrunA17_Chr4g0035661 37.018 389 193 11 9 386 89 436 3.35e-58 218
Msa0709440 MtrunA17_Chr1g0192481 35.052 388 214 10 9 391 58 412 4.81e-58 210
Msa0709440 MtrunA17_Chr2g0319271 37.989 358 190 11 9 353 399 737 1.06e-57 213
Msa0709440 MtrunA17_Chr2g0312631 34.305 446 227 15 9 443 384 774 1.37e-57 216
Msa0709440 MtrunA17_Chr5g0421591 32.220 509 291 14 9 513 374 832 1.45e-57 214
Msa0709440 MtrunA17_Chr5g0407791 36.524 397 205 11 1 394 886 1238 1.75e-57 216
Msa0709440 MtrunA17_Chr5g0421521 32.220 509 291 14 9 513 374 832 4.03e-57 214
Msa0709440 MtrunA17_Chr3g0142261 34.910 444 240 11 55 486 66 472 5.08e-57 215
Msa0709440 MtrunA17_Chr3g0145071 36.649 382 204 11 9 386 99 446 8.32e-57 213
Msa0709440 MtrunA17_Chr7g0271961 37.008 381 203 11 9 384 401 749 8.97e-57 213
Msa0709440 MtrunA17_Chr1g0191851 38.950 362 186 8 9 364 147 479 1.06e-56 210
Msa0709440 MtrunA17_Chr5g0411971 32.220 509 291 14 9 513 399 857 1.35e-56 213
Msa0709440 MtrunA17_Chr2g0307481 36.111 360 191 7 10 359 69 399 2.58e-56 206
Msa0709440 MtrunA17_Chr4g0049011 37.778 360 194 11 9 357 279 619 7.53e-56 205
Msa0709440 MtrunA17_Chr7g0272871 38.292 363 187 8 9 364 127 459 1.24e-55 206
Msa0709440 MtrunA17_Chr6g0483701 34.118 425 217 10 56 475 77 443 1.30e-55 209
Msa0709440 MtrunA17_Chr4g0062291 36.388 371 184 9 7 359 121 457 3.80e-55 204
Msa0709440 MtrunA17_Chr4g0042061 37.255 357 193 10 9 353 432 769 3.88e-55 206
Msa0709440 MtrunA17_Chr2g0280421 36.461 373 211 9 9 377 437 787 1.07e-54 204
Msa0709440 MtrunA17_Chr8g0372171 32.662 447 254 10 10 444 20 431 2.67e-54 205
Msa0709440 MtrunA17_Chr3g0102921 35.484 403 202 12 10 391 439 804 5.13e-54 205
Msa0709440 MtrunA17_Chr8g0369881 34.491 403 217 10 1 400 872 1230 6.49e-54 205
Msa0709440 MtrunA17_Chr4g0036001 33.178 428 251 6 10 433 25 421 1.23e-53 202
Msa0709440 MtrunA17_Chr1g0195111 36.798 356 189 9 9 356 396 723 1.25e-53 203
Msa0709440 MtrunA17_Chr5g0405181 34.367 387 211 9 10 386 21 374 2.82e-52 199
Msa0709440 MtrunA17_Chr7g0245931 33.333 405 214 8 56 428 98 478 1.01e-50 193
Msa0709440 MtrunA17_Chr7g0257301 36.728 324 170 7 54 356 434 743 3.97e-50 192
Msa0709440 MtrunA17_Chr5g0398521 32.287 446 251 10 10 437 58 470 7.18e-50 191
Msa0709440 MtrunA17_Chr5g0447041 33.886 422 207 11 9 384 434 829 8.54e-50 192
Msa0709440 MtrunA17_Chr7g0238581 32.493 357 204 7 10 358 26 353 3.10e-49 186
Msa0709440 MtrunA17_Chr3g0101021 32.853 347 203 7 53 386 105 434 4.51e-49 189
Msa0709440 MtrunA17_Chr1g0191181 35.598 368 209 11 9 373 88 430 7.24e-48 181
Msa0709440 MtrunA17_Chr5g0445211 34.195 348 197 8 54 386 107 437 1.96e-47 184
Msa0709440 MtrunA17_Chr2g0331761 35.393 356 188 8 10 356 186 508 2.36e-47 181
Msa0709440 MtrunA17_Chr4g0070001 28.222 613 323 19 10 574 144 687 2.12e-46 181
Msa0709440 MtrunA17_Chr6g0485471 32.266 406 228 10 4 393 107 481 1.14e-45 176
Msa0709440 MtrunA17_Chr4g0067421 33.241 361 200 9 10 356 206 539 7.15e-43 168
Msa0709440 MtrunA17_Chr2g0295881 28.330 473 272 12 10 443 198 642 2.52e-42 167
Msa0709440 MtrunA17_Chr8g0367581 35.876 354 180 16 9 355 146 459 3.03e-38 155
Msa0709440 MtrunA17_Chr1g0187411 31.948 385 185 16 10 360 131 472 4.10e-32 134
Msa0709440 MtrunA17_Chr8g0386891 41.538 195 99 4 201 383 4 195 2.68e-30 125
Msa0709440 MtrunA17_Chr7g0269681 40.230 174 95 3 201 368 41 211 2.41e-27 117
Msa0709440 MtrunA17_Chr8g0390981 39.634 164 86 4 9 170 515 667 4.82e-26 115
Msa0709440 MtrunA17_Chr8g0390991 42.784 194 97 5 201 384 4 193 1.33e-24 109
Msa0709440 MtrunA17_Chr6g0484501 39.487 195 103 4 201 383 34 225 4.33e-24 102
Msa0709440 MtrunA17_Chr3g0142841 27.931 290 158 8 58 332 145 398 8.64e-24 108
Msa0709440 MtrunA17_Chr6g0470541 27.090 299 185 10 56 353 51 317 1.69e-23 107
Msa0709440 MtrunA17_Chr6g0484511 35.625 160 90 4 9 166 289 437 6.60e-22 100
Msa0709440 MtrunA17_Chr8g0386901 35.849 159 88 5 9 164 483 630 1.16e-19 94.7
Msa0709440 MtrunA17_Chr7g0269691 36.478 159 85 6 9 164 400 545 4.51e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709440 AT2G36200.1 70.618 1004 294 1 4 1007 7 1009 0.0 1468
Msa0709440 AT2G36200.2 68.502 1035 294 2 4 1007 7 1040 0.0 1450
Msa0709440 AT3G45850.2 48.842 993 494 6 4 991 50 1033 0.0 904
Msa0709440 AT3G45850.1 48.842 993 494 6 4 991 50 1033 0.0 904
Msa0709440 AT2G28620.1 47.164 1005 523 5 4 1007 45 1042 0.0 891
Msa0709440 AT2G28620.3 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa0709440 AT2G28620.2 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa0709440 AT2G37420.1 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa0709440 AT2G37420.2 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa0709440 AT5G60930.2 36.501 463 236 14 10 441 7 442 5.06e-69 252
Msa0709440 AT5G60930.3 36.501 463 236 14 10 441 7 442 5.52e-69 252
Msa0709440 AT5G60930.1 36.501 463 236 14 10 441 7 442 1.01e-68 251
Msa0709440 AT3G17360.3 40.695 403 183 9 6 386 165 533 2.64e-68 251
Msa0709440 AT3G17360.2 40.695 403 183 9 6 386 165 533 3.22e-68 251
Msa0709440 AT3G17360.1 40.695 403 183 9 6 386 165 533 3.45e-68 251
Msa0709440 AT1G59540.1 41.667 336 169 5 58 389 46 358 3.82e-68 245
Msa0709440 AT5G47820.2 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa0709440 AT5G47820.1 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa0709440 AT3G19050.1 42.162 370 176 8 9 364 193 538 3.15e-66 245
Msa0709440 AT3G10180.1 36.693 387 202 7 10 386 4 357 6.38e-66 243
Msa0709440 AT3G10180.2 36.693 387 202 7 10 386 4 357 6.51e-66 243
Msa0709440 AT3G44050.1 38.945 398 209 7 9 395 93 467 1.81e-65 241
Msa0709440 AT3G12020.4 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa0709440 AT3G12020.1 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa0709440 AT3G23670.2 40.896 357 168 10 53 385 128 465 1.12e-64 237
Msa0709440 AT2G22610.3 33.658 514 274 13 9 513 418 873 2.28e-64 237
Msa0709440 AT3G12020.3 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa0709440 AT3G12020.2 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa0709440 AT2G22610.1 33.658 514 274 13 9 513 417 872 2.58e-64 237
Msa0709440 AT2G22610.2 33.800 500 267 12 9 499 417 861 5.68e-64 236
Msa0709440 AT3G23670.1 40.896 357 168 10 53 385 128 465 7.33e-64 236
Msa0709440 AT4G14150.1 38.251 366 185 8 54 396 124 471 1.77e-62 232
Msa0709440 AT3G50240.2 36.520 408 208 12 10 388 26 411 7.10e-62 228
Msa0709440 AT3G50240.4 36.520 408 208 12 10 388 26 411 7.63e-62 229
Msa0709440 AT3G50240.1 36.520 408 208 12 10 388 26 411 8.38e-62 229
Msa0709440 AT5G06670.8 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0709440 AT5G06670.4 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0709440 AT5G06670.7 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa0709440 AT5G06670.5 37.760 384 199 11 9 386 66 415 2.21e-61 224
Msa0709440 AT5G06670.2 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa0709440 AT5G06670.3 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa0709440 AT1G73860.2 36.935 398 199 12 9 383 426 794 2.53e-59 221
Msa0709440 AT1G21730.1 36.573 391 208 11 9 393 75 431 2.64e-59 220
Msa0709440 AT1G73860.1 37.186 398 198 12 9 383 509 877 7.48e-59 220
Msa0709440 AT5G06670.6 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa0709440 AT5G06670.1 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa0709440 AT3G63480.2 38.292 363 194 9 9 364 3 342 2.72e-58 208
Msa0709440 AT1G18370.1 34.829 468 252 13 10 461 32 462 2.97e-58 218
Msa0709440 AT1G18410.3 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa0709440 AT1G18410.2 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa0709440 AT1G18410.4 35.461 423 217 12 9 413 632 1016 7.72e-58 218
Msa0709440 AT2G21380.2 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa0709440 AT2G21380.1 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa0709440 AT3G63480.1 38.147 367 193 11 9 364 3 346 3.24e-57 205
Msa0709440 AT5G27000.1 35.068 442 237 16 9 433 394 802 3.51e-57 214
Msa0709440 AT4G39050.1 37.150 393 195 11 9 390 98 449 7.28e-57 214
Msa0709440 AT1G18410.5 35.000 420 210 13 9 413 479 850 1.92e-56 212
Msa0709440 AT5G27550.2 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa0709440 AT5G27550.1 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa0709440 AT1G18410.1 34.515 423 213 12 9 413 632 1008 8.79e-56 211
Msa0709440 AT4G05190.2 38.095 357 191 11 9 353 415 753 1.25e-55 207
Msa0709440 AT5G65930.1 37.190 363 191 9 1 360 884 1212 1.34e-55 211
Msa0709440 AT5G65930.3 37.190 363 191 9 1 360 891 1219 1.35e-55 211
Msa0709440 AT5G65930.2 37.190 363 191 9 1 360 885 1213 1.36e-55 211
Msa0709440 AT3G54870.1 38.484 343 178 8 56 386 150 471 2.02e-55 209
Msa0709440 AT3G54870.3 38.484 343 178 8 56 386 150 471 2.34e-55 208
Msa0709440 AT4G05190.1 38.095 357 191 11 9 353 428 766 2.45e-55 207
Msa0709440 AT3G54870.2 38.484 343 178 8 56 386 150 471 3.83e-55 209
Msa0709440 AT1G09170.3 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa0709440 AT1G09170.7 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa0709440 AT1G09170.4 38.746 351 188 10 9 356 434 760 5.72e-55 206
Msa0709440 AT4G21270.1 37.047 359 190 10 9 352 431 768 6.10e-55 206
Msa0709440 AT5G66310.2 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0709440 AT5G66310.3 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0709440 AT5G66310.1 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa0709440 AT1G72250.4 35.806 391 207 10 9 383 511 873 6.30e-55 209
Msa0709440 AT5G54670.3 37.465 355 192 11 9 353 336 670 6.82e-55 204
Msa0709440 AT1G72250.3 35.806 391 207 10 9 383 512 874 6.83e-55 208
Msa0709440 AT1G09170.2 38.746 351 188 10 9 356 434 760 7.12e-55 206
Msa0709440 AT1G72250.2 35.806 391 207 10 9 383 500 862 7.30e-55 208
Msa0709440 AT1G72250.1 35.806 391 207 10 9 383 491 853 7.42e-55 208
Msa0709440 AT4G27180.1 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa0709440 AT4G27180.2 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa0709440 AT3G49650.1 33.097 423 232 11 5 407 10 401 1.10e-54 205
Msa0709440 AT1G09170.5 38.746 351 188 10 9 356 434 760 1.31e-54 207
Msa0709440 AT5G54670.1 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa0709440 AT5G54670.2 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa0709440 AT1G18550.1 38.889 306 160 4 54 357 202 482 7.41e-54 201
Msa0709440 AT3G51150.2 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0709440 AT3G51150.4 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0709440 AT3G51150.3 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa0709440 AT3G51150.1 32.579 442 255 10 2 434 12 419 8.48e-54 204
Msa0709440 AT3G44730.1 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa0709440 AT3G44730.4 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa0709440 AT3G44730.2 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa0709440 AT3G44730.3 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa0709440 AT1G12430.1 31.056 483 261 11 10 467 71 506 4.76e-53 201
Msa0709440 AT1G12430.2 31.056 483 261 11 10 467 71 506 4.97e-53 201
Msa0709440 AT1G59540.2 41.328 271 144 3 123 389 7 266 9.38e-53 198
Msa0709440 AT4G24170.1 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa0709440 AT4G24170.2 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa0709440 AT2G47500.2 36.080 352 195 9 9 356 399 724 3.25e-52 199
Msa0709440 AT2G47500.1 36.182 351 194 9 10 356 400 724 4.37e-52 199
Msa0709440 AT4G38950.3 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0709440 AT4G38950.5 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0709440 AT4G38950.4 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0709440 AT4G38950.1 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0709440 AT4G38950.2 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa0709440 AT2G21300.2 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0709440 AT2G21300.4 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0709440 AT2G21300.3 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0709440 AT2G21300.1 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0709440 AT2G21300.5 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa0709440 AT1G55550.1 35.817 349 195 9 9 356 91 411 1.16e-50 193
Msa0709440 AT5G41310.1 35.433 381 189 12 9 375 422 759 2.53e-50 193
Msa0709440 AT3G10310.1 35.876 354 194 10 9 356 363 689 2.92e-50 193
Msa0709440 AT3G10310.2 35.876 354 194 10 9 356 363 689 2.95e-50 193
Msa0709440 AT3G43210.3 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0709440 AT3G43210.5 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0709440 AT3G43210.2 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0709440 AT3G43210.4 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0709440 AT3G43210.1 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa0709440 AT1G01950.1 31.004 458 259 9 10 435 61 493 1.48e-49 190
Msa0709440 AT1G01950.2 31.004 458 259 9 10 435 61 493 1.58e-49 190
Msa0709440 AT1G63640.2 35.544 377 205 10 9 375 472 820 1.83e-49 191
Msa0709440 AT1G01950.3 31.004 458 259 9 10 435 61 493 1.93e-49 190
Msa0709440 AT1G63640.1 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa0709440 AT1G63640.4 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa0709440 AT1G63640.3 35.185 378 212 10 9 375 472 827 3.01e-49 190
Msa0709440 AT1G63640.5 35.185 378 212 10 9 375 462 817 4.01e-49 190
Msa0709440 AT5G27950.1 33.412 425 234 12 9 413 79 474 3.66e-48 182
Msa0709440 AT3G50240.3 38.006 321 157 9 96 388 3 309 9.25e-47 182
Msa0709440 AT1G09170.6 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa0709440 AT1G09170.8 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa0709440 AT3G16060.1 34.270 356 192 8 10 356 170 492 1.12e-46 179
Msa0709440 AT5G02370.1 31.421 366 208 9 9 366 20 350 1.58e-45 173
Msa0709440 AT3G20150.2 32.184 348 206 8 53 386 133 464 9.81e-45 176
Msa0709440 AT3G20150.1 32.184 348 206 8 53 386 133 464 1.30e-44 176
Msa0709440 AT1G09170.1 36.103 349 164 11 9 356 434 724 3.52e-44 174
Msa0709440 AT3G16630.2 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa0709440 AT3G16630.1 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa0709440 AT1G01950.4 31.117 376 203 8 92 435 1 352 1.52e-37 152
Msa0709440 AT5G65460.2 30.303 396 225 10 9 391 138 495 9.87e-37 150
Msa0709440 AT5G65460.6 30.303 396 225 10 9 391 138 495 1.20e-36 150
Msa0709440 AT5G65460.1 30.303 396 225 10 9 391 138 495 1.80e-36 150
Msa0709440 AT5G65460.4 30.303 396 225 10 9 391 138 495 2.05e-36 150
Msa0709440 AT5G65460.3 30.303 396 232 11 9 391 138 502 5.69e-35 145
Msa0709440 AT5G10470.2 31.161 353 198 11 9 355 142 455 2.58e-33 140
Msa0709440 AT5G10470.1 31.161 353 198 11 9 355 142 455 2.69e-33 140
Msa0709440 AT4G14330.1 30.986 355 201 12 10 356 49 367 5.13e-32 135
Msa0709440 AT3G51150.5 34.661 251 161 2 187 434 16 266 1.98e-31 133
Msa0709440 AT5G27950.2 32.476 311 181 8 123 413 7 308 2.68e-31 129
Msa0709440 AT5G42490.2 30.363 303 176 7 1 299 1 272 2.01e-29 127
Msa0709440 AT5G42490.1 30.363 303 176 7 1 299 1 272 2.11e-29 127
Msa0709440 AT5G65460.5 30.502 259 149 6 143 391 12 249 4.05e-18 90.5
Msa0709440 AT5G23910.2 25.490 255 155 7 76 330 79 298 3.16e-16 84.0
Msa0709440 AT5G23910.1 25.490 255 155 7 76 330 75 294 3.17e-16 84.0
Msa0709440 AT1G20060.10 26.897 290 169 6 58 333 165 425 1.10e-14 79.3
Msa0709440 AT1G20060.9 26.897 290 169 6 58 333 165 425 1.16e-14 79.3
Msa0709440 AT1G20060.5 26.897 290 169 6 58 333 165 425 1.22e-14 79.3
Msa0709440 AT1G20060.4 26.897 290 169 6 58 333 165 425 1.25e-14 79.3
Msa0709440 AT1G20060.8 26.897 290 169 6 58 333 165 425 1.31e-14 79.3
Msa0709440 AT1G20060.3 26.897 290 169 6 58 333 165 425 1.32e-14 79.3
Msa0709440 AT1G20060.2 26.897 290 169 6 58 333 165 425 1.33e-14 79.3
Msa0709440 AT1G20060.6 26.897 290 169 6 58 333 165 425 1.34e-14 79.3
Msa0709440 AT1G20060.7 26.897 290 169 6 58 333 165 425 1.35e-14 79.3

Find 218 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCACCCAATTGAATTAA+TGG 0.200750 5_1:-601898 Msa0709440:exon
GCTTCATTATTTGCGAAAAT+TGG 0.208423 5_1:-604751 Msa0709440:intron
CGAAATCTGGTTAATATTAA+AGG 0.223932 5_1:-601787 Msa0709440:three_prime_UTR
AGTACTGCTCATTCGGCTTT+TGG 0.230539 5_1:-603008 Msa0709440:CDS
TTTCTTTCTCTTTCTCTTCT+GGG 0.237285 5_1:+607883 None:intergenic
CTCGGAATCACTCCTGCTTC+TGG 0.261269 5_1:+607083 None:intergenic
CAATGCTCTCTGTTTGCATT+TGG 0.270593 5_1:+603631 None:intergenic
GGAAATTTCAAAGGTTAGTT+TGG 0.272007 5_1:-606949 Msa0709440:CDS
TCCTGATAGTATCTTTCCTT+TGG 0.282763 5_1:+605658 None:intergenic
ACTCAAAGCTTGTTGATCTT+AGG 0.286567 5_1:-603291 Msa0709440:CDS
ACCACCACCATTAATTCAAT+TGG 0.289536 5_1:+601891 None:intergenic
AAGCCCTTCTTGAGGAATTC+CGG 0.291935 5_1:-601988 Msa0709440:CDS
TTAATTAGTTCTTCACCTTC+AGG 0.292142 5_1:+606627 None:intergenic
AATAAAAGTTTGCTTACATT+AGG 0.296521 5_1:-606398 Msa0709440:CDS
CTGAATTTGGTGGATCTTGC+GGG 0.297261 5_1:-606594 Msa0709440:CDS
TGCAAAGAGAACCAACCTTC+TGG 0.303724 5_1:+604571 None:intergenic
CTTATCATGAATTCCCAAAA+AGG 0.315109 5_1:+604482 None:intergenic
TAAGTGTGGTAAACTGAATT+TGG 0.316113 5_1:-606607 Msa0709440:CDS
TGATTTAGAGAAAGCTCTTC+AGG 0.326196 5_1:-604779 Msa0709440:CDS
TGAATGACCGTGGGAGGATA+TGG 0.333613 5_1:+604130 None:intergenic
AAAATGTCTGGTAAAGAAAA+AGG 0.333790 5_1:-607808 Msa0709440:CDS
CATGAGGCTGTAAATGAGTT+AGG 0.341917 5_1:-602969 Msa0709440:CDS
AGTTTCTGCAGTGCGTCTTT+TGG 0.342051 5_1:+606800 None:intergenic
TCTTAGCGTGGAACAAATAA+AGG 0.345084 5_1:-603736 Msa0709440:CDS
CTCAAAGCTTGTTGATCTTA+GGG 0.346483 5_1:-603290 Msa0709440:CDS
ATCAAGTTTGTTGCTTAAAT+CGG 0.348509 5_1:+605165 None:intergenic
TTCAAGTTCTACTTCGTTGC+AGG 0.350179 5_1:-607777 Msa0709440:intron
ATAAAAGTTTGCTTACATTA+GGG 0.353144 5_1:-606397 Msa0709440:CDS
ACTCTTATCAAGGATCTTTA+CGG 0.356503 5_1:-605848 Msa0709440:CDS
CTTTAGTTCTTCCTCTCTAC+TGG 0.368324 5_1:+605018 None:intergenic
TTGCGACAGAGTCACTTATC+AGG 0.371706 5_1:-602932 Msa0709440:intron
AGATCTACGACTCAACGTTT+TGG 0.373567 5_1:+607988 None:intergenic
ACCTCAGGCTCACATCTTAC+TGG 0.376235 5_1:+602055 None:intergenic
TCCAAAGGAAAGATACTATC+AGG 0.382428 5_1:-605659 Msa0709440:CDS
ATATATCTCGTTCCGGCGCT+AGG 0.385461 5_1:-606563 Msa0709440:CDS
AGCCCTTCTTGAGGAATTCC+GGG 0.389134 5_1:-601987 Msa0709440:CDS
GCTGTTTCTCAGAATATTGC+CGG 0.394967 5_1:-607569 Msa0709440:CDS
AGTTTGAAGAATGCGAAATC+TGG 0.395758 5_1:-601800 Msa0709440:three_prime_UTR
AACCCTATCGATGTGTTTGC+CGG 0.398973 5_1:+607550 None:intergenic
GAGTCTATTGTACCCTTACT+TGG 0.406741 5_1:+602031 None:intergenic
CGTTTACTTCGTGATTCACT+TGG 0.406888 5_1:-606215 Msa0709440:CDS
TATTGTAGAGTGGGCCGAAT+GGG 0.407632 5_1:-607115 Msa0709440:intron
TTCACATGCCCTGTGTTCAA+TGG 0.410810 5_1:+602208 None:intergenic
TAGTGTTAGTACTGCTCATT+CGG 0.418070 5_1:-603015 Msa0709440:CDS
GTAAGGGAATGGTAGCGTTC+GGG 0.425898 5_1:+607926 None:intergenic
CGTAACTCGTCGTCACTAAA+CGG 0.426279 5_1:+607641 None:intergenic
TCCTCAAGAAGGGCTTCAAT+TGG 0.434669 5_1:+601995 None:intergenic
CTTCTGTGGCCGCAGTTGTA+AGG 0.441833 5_1:+603992 None:intergenic
TAATTAGTTCTTCACCTTCA+GGG 0.442192 5_1:+606628 None:intergenic
ATATTACAACCAATGCAAAA+AGG 0.444775 5_1:-603213 Msa0709440:CDS
CAGGGGTTGCTTCTTTGATG+TGG 0.445907 5_1:+606646 None:intergenic
AGTTCTTGTGAGAGGGTTGG+AGG 0.446987 5_1:-606877 Msa0709440:CDS
CCTTTACCATCCTCCATAAG+AGG 0.448559 5_1:+606903 None:intergenic
ACAACTGCGGCCACAGAAGC+TGG 0.453498 5_1:-603988 Msa0709440:CDS
TGAGCCTGAGGTTCCAAGTA+AGG 0.455105 5_1:-602044 Msa0709440:CDS
GATTACTGATTTGCTTGCTC+CGG 0.455133 5_1:-606973 Msa0709440:CDS
GTGAAAATGAGAGCGGGGTA+AGG 0.456226 5_1:+607909 None:intergenic
CTTGTGTCTAAATCCCATCT+TGG 0.459939 5_1:-601737 Msa0709440:three_prime_UTR
ACTTGCTCGGTTGTCTGTTG+TGG 0.461278 5_1:-601864 Msa0709440:three_prime_UTR
AGGATGTAATGTGATATCTA+AGG 0.461712 5_1:-601767 Msa0709440:three_prime_UTR
GCAAAGAGAACCAACCTTCT+GGG 0.463613 5_1:+604572 None:intergenic
GGTAAGGGAATGGTAGCGTT+CGG 0.465385 5_1:+607925 None:intergenic
GCTTATGGTCAAACCGGTAC+CGG 0.465857 5_1:-607310 Msa0709440:CDS
GTTCTTTGCCACATCTTCCT+CGG 0.465992 5_1:+602627 None:intergenic
ATGAGGCTGTAAATGAGTTA+GGG 0.467123 5_1:-602968 Msa0709440:CDS
AATTTCAAAGGTTAGTTTGG+AGG 0.468206 5_1:-606946 Msa0709440:CDS
TCAGGAAGAGATTGAGAAGA+AGG 0.468367 5_1:-605641 Msa0709440:intron
ACCTTGGTCATATTCCATAC+AGG 0.468931 5_1:-606349 Msa0709440:intron
AAATGTTGTGCGTTTGCATA+AGG 0.469562 5_1:-604189 Msa0709440:CDS
TGGAGTTCTTGTGAGAGGGT+TGG 0.470076 5_1:-606880 Msa0709440:CDS
CCACCACCATTAATTCAATT+GGG 0.472536 5_1:+601892 None:intergenic
AGTTCTCTTTGTTGTGCAGA+AGG 0.472884 5_1:+607397 None:intergenic
TTGTGTCTAAATCCCATCTT+GGG 0.473561 5_1:-601736 Msa0709440:three_prime_UTR
CCAAACTAATCGAAAATGTC+TGG 0.475096 5_1:-607820 Msa0709440:exon
ATTTATACTCTTCTCGAAAG+AGG 0.476525 5_1:-606828 Msa0709440:CDS
GTTTACTTCGTGATTCACTT+GGG 0.477940 5_1:-606214 Msa0709440:CDS
CACATTGGATTATGCACATA+GGG 0.482800 5_1:-606123 Msa0709440:CDS
AGCTATATTTCATCCCAAGA+TGG 0.485104 5_1:+601723 None:intergenic
GAAATTGAACGCCTTAAGTC+AGG 0.486114 5_1:-605824 Msa0709440:intron
TCAGAAAATATATCTCGTTC+CGG 0.490535 5_1:-606570 Msa0709440:CDS
GGGGAGTTGCCTCCAGAAGC+AGG 0.490766 5_1:-607095 Msa0709440:CDS
AAAGCAACTCACCTGACTTA+AGG 0.490808 5_1:+605813 None:intergenic
GGCTGATCAGATTGAGCAGA+TGG 0.491400 5_1:-605371 Msa0709440:CDS
AAACACATGCTTGATGAGCT+AGG 0.492131 5_1:+604809 None:intergenic
CTAACCTTTGAAATTTCCTC+CGG 0.492328 5_1:+606954 None:intergenic
TGAATCTTCTTCTGATGTAA+AGG 0.493394 5_1:-601951 Msa0709440:CDS
TCTGGAGGCAACTCCCCATT+CGG 0.494521 5_1:+607101 None:intergenic
GATGAAATCAACTCTTATCA+AGG 0.496778 5_1:-605858 Msa0709440:CDS
ACTGAATTTGGTGGATCTTG+CGG 0.498055 5_1:-606595 Msa0709440:CDS
TCGATATACCGTCAATGAAA+AGG 0.498711 5_1:-604990 Msa0709440:CDS
TCTAAAACTTCATTTACTAT+CGG 0.500281 5_1:+607355 None:intergenic
TACTGATTTGCTTGCTCCGG+AGG 0.500556 5_1:-606970 Msa0709440:CDS
TCTTCTAAGCAATGAACAGC+GGG 0.501914 5_1:+606155 None:intergenic
TTCACGTTCTTCTGCAGATG+TGG 0.503980 5_1:+602316 None:intergenic
CACAATTGAATCTTATCAGA+AGG 0.504661 5_1:-605344 Msa0709440:intron
CGTTGAGTCGTAGATCTAAA+GGG 0.504791 5_1:-607982 Msa0709440:five_prime_UTR
TATATCTCGTTCCGGCGCTA+GGG 0.505296 5_1:-606562 Msa0709440:CDS
GCTATATTTCATCCCAAGAT+GGG 0.508639 5_1:+601724 None:intergenic
TAGGGTCGTGCTAGAGAAGC+TGG 0.509761 5_1:-606428 Msa0709440:CDS
CCCAATTGAATTAATGGTGG+TGG 0.511093 5_1:-601892 Msa0709440:exon
TTGCCGGCAAACACATCGAT+AGG 0.515439 5_1:-607553 Msa0709440:CDS
ACGTTGAGTCGTAGATCTAA+AGG 0.515890 5_1:-607983 Msa0709440:five_prime_UTR
CCTCTTATGGAGGATGGTAA+AGG 0.516458 5_1:-606903 Msa0709440:CDS
AATTAGTTCTTCACCTTCAG+GGG 0.516668 5_1:+606629 None:intergenic
GTACCCTTACTTGGAACCTC+AGG 0.521316 5_1:+602040 None:intergenic
TCTTGAAGAGTTTGTAGCAC+GGG 0.523819 5_1:-603658 Msa0709440:CDS
TGAAAATGAGAGCGGGGTAA+GGG 0.524760 5_1:+607910 None:intergenic
ATGAGAGCGGGGTAAGGGAA+TGG 0.526307 5_1:+607915 None:intergenic
AGAAGAAACTTTGAGCACAT+TGG 0.527349 5_1:-606138 Msa0709440:CDS
TCAAGCGGAACTTGCCCAGA+AGG 0.527458 5_1:-604586 Msa0709440:CDS
TTTACTTCGTGATTCACTTG+GGG 0.527789 5_1:-606213 Msa0709440:CDS
GCGGAACTTGCCCAGAAGGT+TGG 0.529635 5_1:-604582 Msa0709440:CDS
TTTCCCGGAATTCCTCAAGA+AGG 0.529661 5_1:+601984 None:intergenic
AAAATCTGCTTAACAGCCCT+CGG 0.532341 5_1:+607065 None:intergenic
AGCAATGAGTTTCTCCGACT+CGG 0.536022 5_1:+603485 None:intergenic
ATATCTGAACAGAGAAAAGC+AGG 0.537704 5_1:-604959 Msa0709440:intron
AAAGGAGATTTCTGAGCGAT+CGG 0.540594 5_1:-603718 Msa0709440:CDS
ATCTCGTTCCGGCGCTAGGG+AGG 0.540871 5_1:-606559 Msa0709440:intron
CATTAATTCAATTGGGTGAG+AGG 0.541602 5_1:+601899 None:intergenic
TTCCCGGAATTCCTCAAGAA+GGG 0.541778 5_1:+601985 None:intergenic
GGCAAGCTCAGATGCATCGT+TGG 0.542825 5_1:-604168 Msa0709440:CDS
TTTATACTCTTCTCGAAAGA+GGG 0.544349 5_1:-606827 Msa0709440:CDS
TTCTGCACGAGCAGCAGCCG+AGG 0.544773 5_1:-602644 Msa0709440:CDS
GCCAATTGAAGCCCTTCTTG+AGG 0.545654 5_1:-601996 Msa0709440:CDS
GAAATGATTAACCTTGTCGA+AGG 0.549603 5_1:+607523 None:intergenic
CTTGTTGATCTTAGGGAGAG+TGG 0.551246 5_1:-603283 Msa0709440:CDS
AAAGGTGGAGTTCTTGTGAG+AGG 0.552341 5_1:-606885 Msa0709440:CDS
TTCAATTGAATGACCGTGGG+AGG 0.555275 5_1:+604124 None:intergenic
CTTACTGGTGTTGTACCACT+AGG 0.557477 5_1:+602070 None:intergenic
AATACACCGCCCCTTCCCCA+TGG 0.558653 5_1:+601669 None:intergenic
AAGGTGGAGTTCTTGTGAGA+GGG 0.562194 5_1:-606884 Msa0709440:CDS
ATACACCGCCCCTTCCCCAT+GGG 0.562424 5_1:+601670 None:intergenic
GTGTGGTAAACTGAATTTGG+TGG 0.562701 5_1:-606604 Msa0709440:CDS
CTTTACTTAACAAACAATCC+AGG 0.562813 5_1:-606779 Msa0709440:intron
TGCTCCGGAGGAAATTTCAA+AGG 0.564496 5_1:-606958 Msa0709440:CDS
GAGACACATACACCGCCCTC+AGG 0.567781 5_1:+604228 None:intergenic
ATAACACATACCTTTGCTGC+AGG 0.568335 5_1:+603101 None:intergenic
GGAATCACTCCTGCTTCTGG+AGG 0.569628 5_1:+607086 None:intergenic
AAATATTGAGCCAGCTTCTG+TGG 0.569706 5_1:+603978 None:intergenic
ATCAAAGAAGCAACCCCTGA+AGG 0.571587 5_1:-606642 Msa0709440:CDS
ACATCTCAAGTGTATTTGCA+TGG 0.571954 5_1:+602261 None:intergenic
TGCAGCAAAGCATTGCCGTA+TGG 0.572013 5_1:-603131 Msa0709440:CDS
AACACATGCTTGATGAGCTA+GGG 0.572321 5_1:+604810 None:intergenic
AAGAAGGGCTTCAATTGGCA+AGG 0.572739 5_1:+602000 None:intergenic
CAGCTGCCTCTTATGGAGGA+TGG 0.572792 5_1:-606909 Msa0709440:CDS
TTCTTCAATTGAATGACCGT+GGG 0.577395 5_1:+604121 None:intergenic
CCTCTGCAACATGCTGCACA+TGG 0.578113 5_1:+602671 None:intergenic
AAGCTCAGATGCATCGTTGG+AGG 0.578206 5_1:-604165 Msa0709440:CDS
AATGCCCTTGTGGAGCACCT+TGG 0.582656 5_1:-606365 Msa0709440:CDS
AGCAGCAGCCGAGGAAGATG+TGG 0.583212 5_1:-602635 Msa0709440:CDS
TGGAGGTACTCCTGCAGCAA+AGG 0.583971 5_1:-603111 Msa0709440:intron
ACGAAGCAATGCGCCGCAAG+TGG 0.584260 5_1:-607621 Msa0709440:CDS
CTTCTTCAATTGAATGACCG+TGG 0.584778 5_1:+604120 None:intergenic
TTACTTCGTGATTCACTTGG+GGG 0.585368 5_1:-606212 Msa0709440:CDS
ATGTTTCAACCAGCAACTTG+AGG 0.586402 5_1:-605227 Msa0709440:intron
TGAGGCTGTAAATGAGTTAG+GGG 0.588970 5_1:-602967 Msa0709440:CDS
TGCCGGCAAACACATCGATA+GGG 0.591445 5_1:-607552 Msa0709440:CDS
ATGTTTAGAGAGAATCACTC+AGG 0.592534 5_1:-602242 Msa0709440:CDS
GGGTGTGTGAAAATGAGAGC+GGG 0.594707 5_1:+607903 None:intergenic
GGTGAAGAACTAATTAAGTG+TGG 0.594781 5_1:-606621 Msa0709440:CDS
AAGAACAAGTCATTCTTCGA+TGG 0.597882 5_1:-603256 Msa0709440:CDS
ATGTATTACCTCCCTAGCGC+CGG 0.599821 5_1:+606551 None:intergenic
GAACAGAACGGACATCTACA+AGG 0.603630 5_1:-604525 Msa0709440:CDS
CAAGGTGCTTGCCAGTAGAG+AGG 0.604034 5_1:-605029 Msa0709440:CDS
ATTGTAGAGTGGGCCGAATG+GGG 0.605112 5_1:-607114 Msa0709440:intron
AAGCTGCTTCCATTGAACAC+AGG 0.606159 5_1:-602217 Msa0709440:CDS
GAACGGACATCTACAAGGTG+TGG 0.606575 5_1:-604520 Msa0709440:CDS
CTTATGGAGGATGGTAAAGG+TGG 0.606629 5_1:-606900 Msa0709440:CDS
TTATTGTAGAGTGGGCCGAA+TGG 0.607043 5_1:-607116 Msa0709440:intron
GCACATTGGATTATGCACAT+AGG 0.608499 5_1:-606124 Msa0709440:CDS
TGTCGCTATAATGCACGTCT+TGG 0.609364 5_1:+606184 None:intergenic
AGCTGCTTCCATTGAACACA+GGG 0.609438 5_1:-602216 Msa0709440:CDS
AGGAGAATGCAAAAGATCCA+AGG 0.609671 5_1:-607269 Msa0709440:intron
TCGTTACAAGTCACCACTTG+CGG 0.611168 5_1:+607608 None:intergenic
TTCTAAGCAATGAACAGCGG+GGG 0.612866 5_1:+606157 None:intergenic
GGTGGTGGTATCAACTTGCT+CGG 0.614479 5_1:-601877 Msa0709440:three_prime_UTR
GCTGATCAGATTGAGCAGAT+GGG 0.615061 5_1:-605370 Msa0709440:CDS
AAAGCAGCTGCCTCTTATGG+AGG 0.615652 5_1:-606913 Msa0709440:CDS
GCGAGTGATTAATGCCCTTG+TGG 0.616893 5_1:-606375 Msa0709440:CDS
AAAGAGATTCAATCTTAGCG+TGG 0.620048 5_1:-603748 Msa0709440:intron
GAGCCTGAGGTTCCAAGTAA+GGG 0.621669 5_1:-602043 Msa0709440:CDS
GCTGCAGGAGTACCTCCATA+CGG 0.623230 5_1:+603116 None:intergenic
CGATGGACATGTGTCATCAG+TGG 0.625704 5_1:-603239 Msa0709440:CDS
CAGAAGCAGGAGTGATTCCG+AGG 0.626891 5_1:-607082 Msa0709440:CDS
AAATGGGGTCTATATTCCAA+AGG 0.630492 5_1:-605674 Msa0709440:CDS
AGCAAAGCATTGCCGTATGG+AGG 0.630722 5_1:-603128 Msa0709440:CDS
ATCTTGAAGAGTTTGTAGCA+CGG 0.633283 5_1:-603659 Msa0709440:CDS
CCATGTGCAGCATGTTGCAG+AGG 0.638969 5_1:-602671 Msa0709440:CDS
TATGACCAAGGTGCTCCACA+AGG 0.639953 5_1:+606360 None:intergenic
TCATCTGCCATATCCTCCCA+CGG 0.644594 5_1:-604137 Msa0709440:CDS
AGAGAAAATGAAAGACCTGA+GGG 0.646065 5_1:-604243 Msa0709440:CDS
GGTGTATGTGTCTCATATTG+AGG 0.648593 5_1:-604219 Msa0709440:CDS
GGAGAACGTGGAATAAGAGA+CGG 0.650519 5_1:+601920 None:intergenic
TGGCAAAATTGTGAAGACAA+AGG 0.651471 5_1:-608044 Msa0709440:five_prime_UTR
AAACTTGAACAAGACTAGCA+AGG 0.654128 5_1:-605047 Msa0709440:CDS
AGCTGTCTTTCAACACAACA+TGG 0.654858 5_1:-603943 Msa0709440:CDS
AGAAGCAGGAGTGATTCCGA+GGG 0.655095 5_1:-607081 Msa0709440:CDS
ACCTGTATGGAATATGACCA+AGG 0.656221 5_1:+606348 None:intergenic
AATTGGGTGAGAGGAGAACG+TGG 0.659642 5_1:+601908 None:intergenic
TTCTTCTAAGCAATGAACAG+CGG 0.660743 5_1:+606154 None:intergenic
AAGAGAAAATGAAAGACCTG+AGG 0.661629 5_1:-604244 Msa0709440:CDS
ACCAGTAAGATGTGAGCCTG+AGG 0.663461 5_1:-602056 Msa0709440:CDS
GGAGCAATCAAAATCCGAGT+CGG 0.665209 5_1:-603499 Msa0709440:CDS
TACACCGCCCCTTCCCCATG+GGG 0.675110 5_1:+601671 None:intergenic
GAATCAGTTCCTTACAACTG+CGG 0.678491 5_1:-604001 Msa0709440:intron
TCACCCAATTGAATTAATGG+TGG 0.679217 5_1:-601895 Msa0709440:exon
ACATCGTTGTCTGAACAGAA+CGG 0.680443 5_1:-604537 Msa0709440:CDS
TGTTTAGAGAGAATCACTCA+GGG 0.684514 5_1:-602241 Msa0709440:CDS
ATGACCAAGGTGCTCCACAA+GGG 0.696272 5_1:+606361 None:intergenic
CTTCTAAGCAATGAACAGCG+GGG 0.703813 5_1:+606156 None:intergenic
ACACCGCCCCTTCCCCATGG+GGG 0.704634 5_1:+601672 None:intergenic
TTGCAGGACTATGAGCCTAG+TGG 0.711227 5_1:-602085 Msa0709440:intron
TGGGTGTGTGAAAATGAGAG+CGG 0.716302 5_1:+607902 None:intergenic
ACAAGTGAAGAGGACACATG+AGG 0.719990 5_1:-602985 Msa0709440:CDS
GAAAATGAAAGACCTGAGGG+CGG 0.741209 5_1:-604240 Msa0709440:CDS
CAACAAACTTGATACCACTG+AGG 0.766437 5_1:-605155 Msa0709440:intron
GGTGTGTGAAAATGAGAGCG+GGG 0.781251 5_1:+607904 None:intergenic
ACAATGATATCAGACCTCAG+TGG 0.807291 5_1:+605141 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTAATGTCT+TGG - chr5_1:604098-604117 Msa0709440:intron 10.0%
!!! ATACATTATTATATTTTTCT+TGG - chr5_1:606207-606226 Msa0709440:CDS 10.0%
!!! TTGGATTTTTTATTATCTAA+CGG + chr5_1:601593-601612 None:intergenic 15.0%
!!! TTTAATTTGTTGCATTTTTT+TGG - chr5_1:602164-602183 Msa0709440:intron 15.0%
!! ATGAATATACATTGATATTT+AGG - chr5_1:603344-603363 Msa0709440:intron 15.0%
!! TGAATATACATTGATATTTA+GGG - chr5_1:603345-603364 Msa0709440:intron 15.0%
!! ATGAAAATGAATCTTATAAA+AGG + chr5_1:603658-603677 None:intergenic 15.0%
!!! TTTTATATTCTAATTGGTTT+AGG - chr5_1:603703-603722 Msa0709440:CDS 15.0%
!!! TTTGTTTTCTTAAAAAACTA+TGG - chr5_1:604276-604295 Msa0709440:intron 15.0%
!! ATTATATTTATTTATGTCTC+CGG - chr5_1:604928-604947 Msa0709440:intron 15.0%
!! TAATAACTTAAGAAATAGAA+AGG + chr5_1:607212-607231 None:intergenic 15.0%
!! TAATATCTATATTTGATCAT+TGG + chr5_1:607453-607472 None:intergenic 15.0%
!! AAAAAATGAACGAAATGAAA+GGG + chr5_1:601855-601874 None:intergenic 20.0%
!!! AACGTTTTTTAGAAGTTATT+AGG - chr5_1:602099-602118 Msa0709440:intron 20.0%
!!! ACGTTTTTTAGAAGTTATTA+GGG - chr5_1:602100-602119 Msa0709440:intron 20.0%
!! GTTATTAGGGAATTAATTAA+TGG - chr5_1:602113-602132 Msa0709440:intron 20.0%
!!! TCTAAAACTTCATTTACTAT+CGG + chr5_1:602245-602264 None:intergenic 20.0%
!!! ATAGTAAATGAAGTTTTAGA+AGG - chr5_1:602245-602264 Msa0709440:CDS 20.0%
!!! AATTGTACTATTTTTGCTTA+TGG - chr5_1:602272-602291 Msa0709440:CDS 20.0%
!!! TAATGATTTTTATTGTAGAG+TGG - chr5_1:602472-602491 Msa0709440:intron 20.0%
!!! AATGATTTTTATTGTAGAGT+GGG - chr5_1:602473-602492 Msa0709440:intron 20.0%
!!! GTTTTTAGAATTGTATAATG+AGG - chr5_1:602600-602619 Msa0709440:CDS 20.0%
!!! AATAAAAGTTTGCTTACATT+AGG - chr5_1:603199-603218 Msa0709440:CDS 20.0%
!!! ATAAAAGTTTGCTTACATTA+GGG - chr5_1:603200-603219 Msa0709440:CDS 20.0%
!! TCATTAATGTATTGGATAAA+AGG + chr5_1:603614-603633 None:intergenic 20.0%
!! TACATGTATCATTAATGTAT+TGG + chr5_1:603622-603641 None:intergenic 20.0%
!! ATACATTAATGATACATGTA+TGG - chr5_1:603622-603641 Msa0709440:CDS 20.0%
!!! TTTATTTTCTCTGTTTTGAT+TGG - chr5_1:604876-604895 Msa0709440:intron 20.0%
!! CAATCAAAGAATGAATTAAA+GGG + chr5_1:605775-605794 None:intergenic 20.0%
!! ACAATCAAAGAATGAATTAA+AGG + chr5_1:605776-605795 None:intergenic 20.0%
!!! TTTTGAGATCTACTTTTTTT+TGG - chr5_1:606244-606263 Msa0709440:intron 20.0%
!!! TTTTTGTTGTATAATGTGTT+CGG - chr5_1:606720-606739 Msa0709440:intron 20.0%
!! ATAGAATAATGTCAGATTAT+AGG + chr5_1:607050-607069 None:intergenic 20.0%
!!! ATTCATATGAATTATTTTCC+CGG + chr5_1:607631-607650 None:intergenic 20.0%
!!! GCTCAAATAATAGTTATTTT+TGG - chr5_1:607894-607913 Msa0709440:five_prime_UTR 20.0%
!!! TTTTATCTATCTTATTCCAA+TGG - chr5_1:607950-607969 Msa0709440:five_prime_UTR 20.0%
! AAAATGTCTGGTAAAGAAAA+AGG - chr5_1:601789-601808 Msa0709440:three_prime_UTR 25.0%
! GAAAAAATGAACGAAATGAA+AGG + chr5_1:601856-601875 None:intergenic 25.0%
! GAATTAATTAATGGTAGACT+GGG - chr5_1:602122-602141 Msa0709440:intron 25.0%
!!! TTTGTTGCATTTTTTTGGTT+AGG - chr5_1:602169-602188 Msa0709440:intron 25.0%
!!! CATTTTTTTGGTTAGGTTTT+TGG - chr5_1:602176-602195 Msa0709440:intron 25.0%
! AGTAATAATCTACACATACA+TGG - chr5_1:602425-602444 Msa0709440:intron 25.0%
!! TGAGCTTTGTAATATTTGTT+AGG - chr5_1:603150-603169 Msa0709440:CDS 25.0%
!! GAGCTTTGTAATATTTGTTA+GGG - chr5_1:603151-603170 Msa0709440:CDS 25.0%
! TTCAAAAGTAAAAACCTGTA+TGG + chr5_1:603265-603284 None:intergenic 25.0%
! ATTTCAAGAAAAATACTGAC+AGG + chr5_1:603560-603579 None:intergenic 25.0%
!!! ACCTGCTTTTATATTCTAAT+TGG - chr5_1:603697-603716 Msa0709440:CDS 25.0%
! ACCAATTAGAATATAAAAGC+AGG + chr5_1:603701-603720 None:intergenic 25.0%
!!! GAGTTGATTTCATCATTTTT+TGG + chr5_1:603733-603752 None:intergenic 25.0%
! AAACGCATACATCAATATAA+GGG + chr5_1:604190-604209 None:intergenic 25.0%
!!! ATCAAGTTTGTTGCTTAAAT+CGG + chr5_1:604435-604454 None:intergenic 25.0%
! ATGTAATGACAATAAAGAGA+CGG + chr5_1:604487-604506 None:intergenic 25.0%
! ATTCGACATAACAACTTTAA+GGG - chr5_1:604505-604524 Msa0709440:CDS 25.0%
! TTCTCTACCTATATAATTAC+CGG + chr5_1:604950-604969 None:intergenic 25.0%
! ACAAATGTCAAACAATGAAT+TGG + chr5_1:605275-605294 None:intergenic 25.0%
! TAATGGAATATGACAAAACA+AGG + chr5_1:605750-605769 None:intergenic 25.0%
! GAATGAATTAAAGGGAATAA+TGG + chr5_1:605767-605786 None:intergenic 25.0%
! TTGCATTAACATATGTTGTT+TGG - chr5_1:606021-606040 Msa0709440:intron 25.0%
! ATATTACAACCAATGCAAAA+AGG - chr5_1:606384-606403 Msa0709440:CDS 25.0%
!!! GTTATTTCTCCTAGTTTTTT+TGG - chr5_1:606514-606533 Msa0709440:intron 25.0%
!! TGATGTTAATTTGGGATATA+TGG - chr5_1:606747-606766 Msa0709440:intron 25.0%
!! GATGTTAATTTGGGATATAT+GGG - chr5_1:606748-606767 Msa0709440:intron 25.0%
!! ATGTTAATTTGGGATATATG+GGG - chr5_1:606749-606768 Msa0709440:intron 25.0%
!! TCAATTGTAAGCTTTAGTTA+TGG - chr5_1:606807-606826 Msa0709440:CDS 25.0%
! TCGTTATCTCATTAATCAAT+AGG - chr5_1:606853-606872 Msa0709440:CDS 25.0%
! CATTATCGGTCAAATATATT+TGG + chr5_1:607125-607144 None:intergenic 25.0%
! GTTATATCTATGATATTTGC+AGG + chr5_1:607148-607167 None:intergenic 25.0%
! AACTTAAGAAATAGAAAGGA+TGG + chr5_1:607208-607227 None:intergenic 25.0%
!! AACTTTTCAGCAGAATTATA+TGG - chr5_1:607411-607430 Msa0709440:intron 25.0%
!!! TTATATGGTAGGTTATTTTG+TGG - chr5_1:607426-607445 Msa0709440:intron 25.0%
! CGAAATCTGGTTAATATTAA+AGG - chr5_1:607810-607829 Msa0709440:exon 25.0%
! GATTGAAAAAATAACACCAT+TGG + chr5_1:607969-607988 None:intergenic 25.0%
!!! TGGTGTTATTTTTTCAATCT+TGG - chr5_1:607970-607989 Msa0709440:five_prime_UTR 25.0%
!!! TGTTATTTTTTCAATCTTGG+TGG - chr5_1:607973-607992 Msa0709440:five_prime_UTR 25.0%
!!! AATTTTGCCATTGTCGTTTT+GGG + chr5_1:601543-601562 None:intergenic 30.0%
TTTCTTTCTCTTTCTCTTCT+GGG + chr5_1:601717-601736 None:intergenic 30.0%
! TTTTCTTTCTCTTTCTCTTC+TGG + chr5_1:601718-601737 None:intergenic 30.0%
TGCATTTCAAAATCTAACAC+TGG - chr5_1:601916-601935 Msa0709440:CDS 30.0%
GGAATTAATTAATGGTAGAC+TGG - chr5_1:602121-602140 Msa0709440:intron 30.0%
! ATTTTTGCTTATGGTCAAAC+CGG - chr5_1:602281-602300 Msa0709440:CDS 30.0%
! TTCCATGGTAAATGTTTTTC+CGG + chr5_1:602309-602328 None:intergenic 30.0%
! GGAAATTTCAAAGGTTAGTT+TGG - chr5_1:602648-602667 Msa0709440:CDS 30.0%
!! AATTTCAAAGGTTAGTTTGG+AGG - chr5_1:602651-602670 Msa0709440:CDS 30.0%
ATTTATACTCTTCTCGAAAG+AGG - chr5_1:602769-602788 Msa0709440:intron 30.0%
TTTATACTCTTCTCGAAAGA+GGG - chr5_1:602770-602789 Msa0709440:intron 30.0%
CTTTACTTAACAAACAATCC+AGG - chr5_1:602818-602837 Msa0709440:intron 30.0%
! TAATTAGTTCTTCACCTTCA+GGG + chr5_1:602972-602991 None:intergenic 30.0%
! TTAATTAGTTCTTCACCTTC+AGG + chr5_1:602973-602992 None:intergenic 30.0%
TAAGTGTGGTAAACTGAATT+TGG - chr5_1:602990-603009 Msa0709440:CDS 30.0%
TCAGAAAATATATCTCGTTC+CGG - chr5_1:603027-603046 Msa0709440:intron 30.0%
GAACATTAAAAATAAGCCAG+AGG - chr5_1:603501-603520 Msa0709440:CDS 30.0%
TCTTTCAGTCATGTATTTGA+TGG - chr5_1:603588-603607 Msa0709440:intron 30.0%
GATGAAATCAACTCTTATCA+AGG - chr5_1:603739-603758 Msa0709440:CDS 30.0%
ACTCTTATCAAGGATCTTTA+CGG - chr5_1:603749-603768 Msa0709440:intron 30.0%
GTAAGAAATCTAAGGATTCA+CGG + chr5_1:603840-603859 None:intergenic 30.0%
! AAATTTGTGATCCTTTTCAG+AGG - chr5_1:603881-603900 Msa0709440:intron 30.0%
GAAACGCATACATCAATATA+AGG + chr5_1:604191-604210 None:intergenic 30.0%
CACAATTGAATCTTATCAGA+AGG - chr5_1:604253-604272 Msa0709440:CDS 30.0%
CATTCGACATAACAACTTTA+AGG - chr5_1:604504-604523 Msa0709440:CDS 30.0%
TGTTAAAGTTCTGTAATGAC+TGG - chr5_1:604725-604744 Msa0709440:intron 30.0%
GTTAAAGTTCTGTAATGACT+GGG - chr5_1:604726-604745 Msa0709440:intron 30.0%
CATAGTTAACATTAACCCAA+TGG + chr5_1:604753-604772 None:intergenic 30.0%
GCTTCATTATTTGCGAAAAT+TGG - chr5_1:604846-604865 Msa0709440:intron 30.0%
CATTATTTGCGAAAATTGGT+AGG - chr5_1:604850-604869 Msa0709440:intron 30.0%
TATGTCTCCGGTAATTATAT+AGG - chr5_1:604940-604959 Msa0709440:intron 30.0%
!! TGTAGTGAACAATTTTCAAG+CGG - chr5_1:604996-605015 Msa0709440:CDS 30.0%
CTTATCATGAATTCCCAAAA+AGG + chr5_1:605118-605137 None:intergenic 30.0%
!! CTTTTTGGGAATTCATGATA+AGG - chr5_1:605116-605135 Msa0709440:intron 30.0%
! TTCTTAAAGCCTCTTTTTGT+TGG - chr5_1:605204-605223 Msa0709440:CDS 30.0%
! TCTTAAAGCCTCTTTTTGTT+GGG - chr5_1:605205-605224 Msa0709440:CDS 30.0%
AGGCAACAAAAAAAGGATTA+AGG + chr5_1:605313-605332 None:intergenic 30.0%
GTGTTGAAAACAATGAAAAG+TGG + chr5_1:605553-605572 None:intergenic 30.0%
!! TGAATTGACACTTTTTGCTA+GGG - chr5_1:605677-605696 Msa0709440:CDS 30.0%
!! TGATTTTAAGAAAGCTTACG+AGG - chr5_1:605990-606009 Msa0709440:intron 30.0%
! AACATATGTTGTTTGGAAGA+TGG - chr5_1:606028-606047 Msa0709440:intron 30.0%
!! TATATTTTTCTTGGCCTTCA+TGG - chr5_1:606216-606235 Msa0709440:CDS 30.0%
ATCTCAAAAATCATCCATGA+AGG + chr5_1:606233-606252 None:intergenic 30.0%
!!! TTTTTGGTTGTGTCATCTAA+TGG - chr5_1:606260-606279 Msa0709440:intron 30.0%
TTGTGTCATCTAATGGTTAT+TGG - chr5_1:606267-606286 Msa0709440:intron 30.0%
! TTTTTCTGCTTGTATGCAAA+AGG + chr5_1:606420-606439 None:intergenic 30.0%
TAACACTACAGGAATTAAAC+AGG + chr5_1:606570-606589 None:intergenic 30.0%
TTCGGCATATGATGTTAATT+TGG - chr5_1:606738-606757 Msa0709440:intron 30.0%
TCGGCATATGATGTTAATTT+GGG - chr5_1:606739-606758 Msa0709440:intron 30.0%
CAACGTGATATCAATTACTT+TGG - chr5_1:606883-606902 Msa0709440:CDS 30.0%
GATATCAATTACTTTGGTAC+AGG - chr5_1:606889-606908 Msa0709440:CDS 30.0%
ATGATATTTGCAGGCATTAT+CGG + chr5_1:607139-607158 None:intergenic 30.0%
AAATAGAAAGGATGGAATGA+TGG + chr5_1:607200-607219 None:intergenic 30.0%
! ATTCATGTGATCCTTTTTCT+TGG - chr5_1:607244-607263 Msa0709440:intron 30.0%
GAAAAAATACGCCAAGAAAA+AGG + chr5_1:607258-607277 None:intergenic 30.0%
TTTCAGCAGAATTATATGGT+AGG - chr5_1:607415-607434 Msa0709440:intron 30.0%
TGAATCTTCTTCTGATGTAA+AGG - chr5_1:607646-607665 Msa0709440:intron 30.0%
AGGATGTAATGTGATATCTA+AGG - chr5_1:607830-607849 Msa0709440:five_prime_UTR 30.0%
TCAAAAACCCAAAACGACAA+TGG - chr5_1:601533-601552 Msa0709440:three_prime_UTR 35.0%
!! CAATTTTGCCATTGTCGTTT+TGG + chr5_1:601544-601563 None:intergenic 35.0%
TGGCAAAATTGTGAAGACAA+AGG - chr5_1:601553-601572 Msa0709440:three_prime_UTR 35.0%
!! CCAGACATTTTCGATTAGTT+TGG + chr5_1:601780-601799 None:intergenic 35.0%
CCAAACTAATCGAAAATGTC+TGG - chr5_1:601777-601796 Msa0709440:three_prime_UTR 35.0%
CACTGGAATCGATAATTTGA+AGG - chr5_1:601933-601952 Msa0709440:CDS 35.0%
GAAATGATTAACCTTGTCGA+AGG + chr5_1:602077-602096 None:intergenic 35.0%
TACCGGAAAAACATTTACCA+TGG - chr5_1:602304-602323 Msa0709440:CDS 35.0%
GGAAAAACATTTACCATGGA+AGG - chr5_1:602308-602327 Msa0709440:CDS 35.0%
TTGGACGCAAAATTATACCT+TGG + chr5_1:602348-602367 None:intergenic 35.0%
CTGTTTATGCAGTAAAGCAT+TGG + chr5_1:602367-602386 None:intergenic 35.0%
!! CTAACCTTTGAAATTTCCTC+CGG + chr5_1:602646-602665 None:intergenic 35.0%
ACAGAAAAGAAACAATCACC+TGG + chr5_1:602839-602858 None:intergenic 35.0%
! AATTAGTTCTTCACCTTCAG+GGG + chr5_1:602971-602990 None:intergenic 35.0%
GGTGAAGAACTAATTAAGTG+TGG - chr5_1:602976-602995 Msa0709440:CDS 35.0%
TATCATGTACACTACATCAC+AGG - chr5_1:603088-603107 Msa0709440:intron 35.0%
ATCATGTACACTACATCACA+GGG - chr5_1:603089-603108 Msa0709440:intron 35.0%
!! TTTGATAACGCGTCATTCAA+TGG - chr5_1:603287-603306 Msa0709440:CDS 35.0%
CATGTAAGCATACAGCAAAA+GGG + chr5_1:603327-603346 None:intergenic 35.0%
TCATGTAAGCATACAGCAAA+AGG + chr5_1:603328-603347 None:intergenic 35.0%
GTTTACTTCGTGATTCACTT+GGG - chr5_1:603383-603402 Msa0709440:intron 35.0%
TTTACTTCGTGATTCACTTG+GGG - chr5_1:603384-603403 Msa0709440:intron 35.0%
TTCTTCTAAGCAATGAACAG+CGG + chr5_1:603446-603465 None:intergenic 35.0%
AGAAGAAACTTTGAGCACAT+TGG - chr5_1:603459-603478 Msa0709440:CDS 35.0%
CACATTGGATTATGCACATA+GGG - chr5_1:603474-603493 Msa0709440:CDS 35.0%
CAGGTGAAAAACAATGCTAT+AGG + chr5_1:603682-603701 None:intergenic 35.0%
GAACTGAGGTAAGAAATCTA+AGG + chr5_1:603848-603867 None:intergenic 35.0%
! AGTAGCATAAACCTCTGAAA+AGG + chr5_1:603895-603914 None:intergenic 35.0%
TATGCTACTCGTGAGAAAAA+TGG - chr5_1:603906-603925 Msa0709440:intron 35.0%
ATGCTACTCGTGAGAAAAAT+GGG - chr5_1:603907-603926 Msa0709440:intron 35.0%
AAATGGGGTCTATATTCCAA+AGG - chr5_1:603923-603942 Msa0709440:CDS 35.0%
TCCAAAGGAAAGATACTATC+AGG - chr5_1:603938-603957 Msa0709440:CDS 35.0%
TCCTGATAGTATCTTTCCTT+TGG + chr5_1:603942-603961 None:intergenic 35.0%
GAAACAAACCAAGACTAAGA+AGG + chr5_1:603986-604005 None:intergenic 35.0%
AATAGTCATATCGCTACAGT+TGG + chr5_1:604008-604027 None:intergenic 35.0%
! GTTACATAGACCAAAAGTGT+CGG + chr5_1:604049-604068 None:intergenic 35.0%
!! ACTTAGAGTAGTGGGTTAAA+TGG + chr5_1:604167-604186 None:intergenic 35.0%
TATAAGGGACTTAGAGTAGT+GGG + chr5_1:604175-604194 None:intergenic 35.0%
ATATAAGGGACTTAGAGTAG+TGG + chr5_1:604176-604195 None:intergenic 35.0%
TGTATGCGTTTCTTCTGTTA+AGG - chr5_1:604199-604218 Msa0709440:CDS 35.0%
AAACTTGAACAAGACTAGCA+AGG - chr5_1:604550-604569 Msa0709440:CDS 35.0%
TCGATATACCGTCAATGAAA+AGG - chr5_1:604607-604626 Msa0709440:CDS 35.0%
! GATGAACTCCTTTTCATTGA+CGG + chr5_1:604618-604637 None:intergenic 35.0%
ATATCTGAACAGAGAAAAGC+AGG - chr5_1:604638-604657 Msa0709440:CDS 35.0%
CTGTAATGTTCATTTGAGTG+AGG - chr5_1:604699-604718 Msa0709440:intron 35.0%
TGATTTAGAGAAAGCTCTTC+AGG - chr5_1:604818-604837 Msa0709440:CDS 35.0%
TATTTGCGAAAATTGGTAGG+TGG - chr5_1:604853-604872 Msa0709440:intron 35.0%
CATGAATTCCCAAAAAGGAA+TGG + chr5_1:605113-605132 None:intergenic 35.0%
ACAAAAAGCCCAACAAAAAG+AGG + chr5_1:605216-605235 None:intergenic 35.0%
!!! ATCCTTTTTTTGTTGCCTGT+AGG - chr5_1:605315-605334 Msa0709440:intron 35.0%
AAGAGAAAATGAAAGACCTG+AGG - chr5_1:605353-605372 Msa0709440:CDS 35.0%
AGAGAAAATGAAAGACCTGA+GGG - chr5_1:605354-605373 Msa0709440:CDS 35.0%
AAATGTTGTGCGTTTGCATA+AGG - chr5_1:605408-605427 Msa0709440:intron 35.0%
TTCTTCAATTGAATGACCGT+GGG + chr5_1:605479-605498 None:intergenic 35.0%
!! GTGAATTGACACTTTTTGCT+AGG - chr5_1:605676-605695 Msa0709440:CDS 35.0%
AAAGAGATTCAATCTTAGCG+TGG - chr5_1:605849-605868 Msa0709440:CDS 35.0%
TCTTAGCGTGGAACAAATAA+AGG - chr5_1:605861-605880 Msa0709440:CDS 35.0%
ATCTTGAAGAGTTTGTAGCA+CGG - chr5_1:605938-605957 Msa0709440:intron 35.0%
CATCTTGTTCTATTCTGTAC+AGG - chr5_1:606077-606096 Msa0709440:intron 35.0%
! AAGTCCATCTTGTCAGTTTT+TGG - chr5_1:606172-606191 Msa0709440:CDS 35.0%
GTCATCTAATGGTTATTGGT+TGG - chr5_1:606271-606290 Msa0709440:intron 35.0%
!! ACTCAAAGCTTGTTGATCTT+AGG - chr5_1:606306-606325 Msa0709440:intron 35.0%
!! CTCAAAGCTTGTTGATCTTA+GGG - chr5_1:606307-606326 Msa0709440:intron 35.0%
AAGAACAAGTCATTCTTCGA+TGG - chr5_1:606341-606360 Msa0709440:intron 35.0%
CAACCAATGCAAAAAGGAAA+TGG - chr5_1:606390-606409 Msa0709440:CDS 35.0%
GGATGTAGACCAAAAAAACT+AGG + chr5_1:606526-606545 None:intergenic 35.0%
AGTGTTAGAATGTGACTAAG+AGG + chr5_1:606547-606566 None:intergenic 35.0%
TAGTGTTAGTACTGCTCATT+CGG - chr5_1:606582-606601 Msa0709440:CDS 35.0%
ATGAGGCTGTAAATGAGTTA+GGG - chr5_1:606629-606648 Msa0709440:CDS 35.0%
CTCTGTCGCAAAAATATGTT+TGG + chr5_1:606656-606675 None:intergenic 35.0%
! GAGTTATATGGCATTAGCTT+TGG - chr5_1:606784-606803 Msa0709440:CDS 35.0%
ACATCTCAAGTGTATTTGCA+TGG + chr5_1:607339-607358 None:intergenic 35.0%
ATGTTTAGAGAGAATCACTC+AGG - chr5_1:607355-607374 Msa0709440:CDS 35.0%
TGTTTAGAGAGAATCACTCA+GGG - chr5_1:607356-607375 Msa0709440:CDS 35.0%
CATTAATTCAATTGGGTGAG+AGG + chr5_1:607701-607720 None:intergenic 35.0%
CTCTCACCCAATTGAATTAA+TGG - chr5_1:607699-607718 Msa0709440:intron 35.0%
TCACCCAATTGAATTAATGG+TGG - chr5_1:607702-607721 Msa0709440:intron 35.0%
CCACCACCATTAATTCAATT+GGG + chr5_1:607708-607727 None:intergenic 35.0%
ACCACCACCATTAATTCAAT+TGG + chr5_1:607709-607728 None:intergenic 35.0%
AGTTTGAAGAATGCGAAATC+TGG - chr5_1:607797-607816 Msa0709440:CDS 35.0%
TTGTGTCTAAATCCCATCTT+GGG - chr5_1:607861-607880 Msa0709440:five_prime_UTR 35.0%
GCTATATTTCATCCCAAGAT+GGG + chr5_1:607876-607895 None:intergenic 35.0%
AGCTATATTTCATCCCAAGA+TGG + chr5_1:607877-607896 None:intergenic 35.0%
! AGATCTACGACTCAACGTTT+TGG + chr5_1:601612-601631 None:intergenic 40.0%
ACGTTGAGTCGTAGATCTAA+AGG - chr5_1:601614-601633 Msa0709440:three_prime_UTR 40.0%
CGTTGAGTCGTAGATCTAAA+GGG - chr5_1:601615-601634 Msa0709440:three_prime_UTR 40.0%
! TTCAAGTTCTACTTCGTTGC+AGG - chr5_1:601820-601839 Msa0709440:three_prime_UTR 40.0%
!! GCTGTTTCTCAGAATATTGC+CGG - chr5_1:602028-602047 Msa0709440:CDS 40.0%
! AGTTCTCTTTGTTGTGCAGA+AGG + chr5_1:602203-602222 None:intergenic 40.0%
! GGTAAATGTTTTTCCGGTAC+CGG + chr5_1:602303-602322 None:intergenic 40.0%
! TCTTTTGCATTCTCCTTCCA+TGG + chr5_1:602324-602343 None:intergenic 40.0%
AGGAGAATGCAAAAGATCCA+AGG - chr5_1:602328-602347 Msa0709440:intron 40.0%
AAAATCTGCTTAACAGCCCT+CGG + chr5_1:602535-602554 None:intergenic 40.0%
!! GATTACTGATTTGCTTGCTC+CGG - chr5_1:602624-602643 Msa0709440:CDS 40.0%
AAAAAAGCAGCTGCCTCTTA+TGG - chr5_1:602681-602700 Msa0709440:CDS 40.0%
GTGTGGTAAACTGAATTTGG+TGG - chr5_1:602993-603012 Msa0709440:CDS 40.0%
! ACTGAATTTGGTGGATCTTG+CGG - chr5_1:603002-603021 Msa0709440:CDS 40.0%
TCATGTACACTACATCACAG+GGG - chr5_1:603090-603109 Msa0709440:intron 40.0%
ACCTTGGTCATATTCCATAC+AGG - chr5_1:603248-603267 Msa0709440:CDS 40.0%
ACCTGTATGGAATATGACCA+AGG + chr5_1:603252-603271 None:intergenic 40.0%
CGTTTACTTCGTGATTCACT+TGG - chr5_1:603382-603401 Msa0709440:intron 40.0%
TTACTTCGTGATTCACTTGG+GGG - chr5_1:603385-603404 Msa0709440:intron 40.0%
TCTTCTAAGCAATGAACAGC+GGG + chr5_1:603445-603464 None:intergenic 40.0%
GCACATTGGATTATGCACAT+AGG - chr5_1:603473-603492 Msa0709440:CDS 40.0%
CACAATCAACAACAAACCTC+TGG + chr5_1:603520-603539 None:intergenic 40.0%
GAAATTGAACGCCTTAAGTC+AGG - chr5_1:603773-603792 Msa0709440:intron 40.0%
AAAGCAACTCACCTGACTTA+AGG + chr5_1:603787-603806 None:intergenic 40.0%
TTGTCAACAATGCAGAACTG+AGG + chr5_1:603862-603881 None:intergenic 40.0%
TGCTACTCGTGAGAAAAATG+GGG - chr5_1:603908-603927 Msa0709440:intron 40.0%
TCAGGAAGAGATTGAGAAGA+AGG - chr5_1:603956-603975 Msa0709440:CDS 40.0%
AAGGTAGTCCTTCTTAGTCT+TGG - chr5_1:603975-603994 Msa0709440:CDS 40.0%
! TTCATCAAGACCGACACTTT+TGG - chr5_1:604036-604055 Msa0709440:intron 40.0%
CGTTTCTTCTGTTAAGGCTA+TGG - chr5_1:604205-604224 Msa0709440:CDS 40.0%
ATGTTTCAACCAGCAACTTG+AGG - chr5_1:604370-604389 Msa0709440:intron 40.0%
! TTCTCATATCCTCAAGTTGC+TGG + chr5_1:604382-604401 None:intergenic 40.0%
CAACAAACTTGATACCACTG+AGG - chr5_1:604442-604461 Msa0709440:intron 40.0%
ACAATGATATCAGACCTCAG+TGG + chr5_1:604459-604478 None:intergenic 40.0%
!! CTTTAGTTCTTCCTCTCTAC+TGG + chr5_1:604582-604601 None:intergenic 40.0%
ACAGAGAAAAGCAGGTATTC+AGG - chr5_1:604646-604665 Msa0709440:intron 40.0%
AACACATGCTTGATGAGCTA+GGG + chr5_1:604790-604809 None:intergenic 40.0%
AAACACATGCTTGATGAGCT+AGG + chr5_1:604791-604810 None:intergenic 40.0%
ACATCGTTGTCTGAACAGAA+CGG - chr5_1:605060-605079 Msa0709440:intron 40.0%
! AAGCTCTGCCATTCCTTTTT+GGG - chr5_1:605102-605121 Msa0709440:intron 40.0%
AGTGTCAACAACAAGAACAG+CGG + chr5_1:605164-605183 None:intergenic 40.0%
ATTCACTTGAGCTTCTTGTC+TGG - chr5_1:605245-605264 Msa0709440:intron 40.0%
!!! CTTTTTTTGTTGCCTGTAGG+CGG - chr5_1:605318-605337 Msa0709440:intron 40.0%
GGTGTATGTGTCTCATATTG+AGG - chr5_1:605378-605397 Msa0709440:CDS 40.0%
CTTCTTCAATTGAATGACCG+TGG + chr5_1:605480-605499 None:intergenic 40.0%
GAATCAGTTCCTTACAACTG+CGG - chr5_1:605596-605615 Msa0709440:intron 40.0%
AAATATTGAGCCAGCTTCTG+TGG + chr5_1:605622-605641 None:intergenic 40.0%
AGCTGTCTTTCAACACAACA+TGG - chr5_1:605654-605673 Msa0709440:CDS 40.0%
AAAGGAGATTTCTGAGCGAT+CGG - chr5_1:605879-605898 Msa0709440:intron 40.0%
TCTTGAAGAGTTTGTAGCAC+GGG - chr5_1:605939-605958 Msa0709440:intron 40.0%
CAATGCTCTCTGTTTGCATT+TGG + chr5_1:605969-605988 None:intergenic 40.0%
ATCGCCAAAAACTGACAAGA+TGG + chr5_1:606179-606198 None:intergenic 40.0%
!! CTGCCATTTCCTTTTTGCAT+TGG + chr5_1:606396-606415 None:intergenic 40.0%
ATAACACATACCTTTGCTGC+AGG + chr5_1:606499-606518 None:intergenic 40.0%
ATGAGCAGTACTAACACTAC+AGG + chr5_1:606581-606600 None:intergenic 40.0%
CATGAGGCTGTAAATGAGTT+AGG - chr5_1:606628-606647 Msa0709440:CDS 40.0%
TGAGGCTGTAAATGAGTTAG+GGG - chr5_1:606630-606649 Msa0709440:CDS 40.0%
! ATTTGGGATATATGGGGATG+CGG - chr5_1:606755-606774 Msa0709440:intron 40.0%
!!! GATTTTTTGCAGCAGTTCGA+TGG - chr5_1:606999-607018 Msa0709440:CDS 40.0%
! GAGTATTGTGGTCTGGATAT+TGG - chr5_1:607023-607042 Msa0709440:CDS 40.0%
CTTCAGCTGCAATTTGCAAA+TGG + chr5_1:607082-607101 None:intergenic 40.0%
! TGATTTGTGTTGTGTCTTGC+AGG - chr5_1:607496-607515 Msa0709440:intron 40.0%
GAGTCTATTGTACCCTTACT+TGG + chr5_1:607569-607588 None:intergenic 40.0%
CCCAATTGAATTAATGGTGG+TGG - chr5_1:607705-607724 Msa0709440:intron 40.0%
CTTGTGTCTAAATCCCATCT+TGG - chr5_1:607860-607879 Msa0709440:five_prime_UTR 40.0%
TGAAAATGAGAGCGGGGTAA+GGG + chr5_1:601690-601709 None:intergenic 45.0%
TGGGTGTGTGAAAATGAGAG+CGG + chr5_1:601698-601717 None:intergenic 45.0%
CGTAACTCGTCGTCACTAAA+CGG + chr5_1:601959-601978 None:intergenic 45.0%
TCGTTACAAGTCACCACTTG+CGG + chr5_1:601992-602011 None:intergenic 45.0%
AACCCTATCGATGTGTTTGC+CGG + chr5_1:602050-602069 None:intergenic 45.0%
! TAGGGTTTTCACCTTCGACA+AGG - chr5_1:602063-602082 Msa0709440:CDS 45.0%
TTATTGTAGAGTGGGCCGAA+TGG - chr5_1:602481-602500 Msa0709440:intron 45.0%
TATTGTAGAGTGGGCCGAAT+GGG - chr5_1:602482-602501 Msa0709440:intron 45.0%
! CAGATTTTTGACACGCTCGA+GGG - chr5_1:602547-602566 Msa0709440:intron 45.0%
TGCTCCGGAGGAAATTTCAA+AGG - chr5_1:602639-602658 Msa0709440:CDS 45.0%
CCTTTACCATCCTCCATAAG+AGG + chr5_1:602697-602716 None:intergenic 45.0%
CCTCTTATGGAGGATGGTAA+AGG - chr5_1:602694-602713 Msa0709440:intron 45.0%
CTTATGGAGGATGGTAAAGG+TGG - chr5_1:602697-602716 Msa0709440:intron 45.0%
AAAGGTGGAGTTCTTGTGAG+AGG - chr5_1:602712-602731 Msa0709440:intron 45.0%
AAGGTGGAGTTCTTGTGAGA+GGG - chr5_1:602713-602732 Msa0709440:intron 45.0%
! AGTTTCTGCAGTGCGTCTTT+TGG + chr5_1:602800-602819 None:intergenic 45.0%
ATCAAAGAAGCAACCCCTGA+AGG - chr5_1:602955-602974 Msa0709440:CDS 45.0%
! CTGAATTTGGTGGATCTTGC+GGG - chr5_1:603003-603022 Msa0709440:CDS 45.0%
CGCTAGGGAGGTAATACATT+CGG - chr5_1:603050-603069 Msa0709440:intron 45.0%
TGTCGCTATAATGCACGTCT+TGG + chr5_1:603416-603435 None:intergenic 45.0%
TTCTAAGCAATGAACAGCGG+GGG + chr5_1:603443-603462 None:intergenic 45.0%
CTTCTAAGCAATGAACAGCG+GGG + chr5_1:603444-603463 None:intergenic 45.0%
GCTGATCAGATTGAGCAGAT+GGG - chr5_1:604227-604246 Msa0709440:CDS 45.0%
GCATTACAGAGACAACAAGC+AGG + chr5_1:604334-604353 None:intergenic 45.0%
TCTGTAATGACTGGGACCAT+TGG - chr5_1:604734-604753 Msa0709440:intron 45.0%
CTGTAATGACTGGGACCATT+GGG - chr5_1:604735-604754 Msa0709440:intron 45.0%
GCAAAGAGAACCAACCTTCT+GGG + chr5_1:605028-605047 None:intergenic 45.0%
TGCAAAGAGAACCAACCTTC+TGG + chr5_1:605029-605048 None:intergenic 45.0%
GAACAGAACGGACATCTACA+AGG - chr5_1:605072-605091 Msa0709440:intron 45.0%
! GAAGCTCTGCCATTCCTTTT+TGG - chr5_1:605101-605120 Msa0709440:intron 45.0%
AACAACAAGAACAGCGGCTT+TGG + chr5_1:605158-605177 None:intergenic 45.0%
CGCCTACAGGCAACAAAAAA+AGG + chr5_1:605320-605339 None:intergenic 45.0%
GAAAATGAAAGACCTGAGGG+CGG - chr5_1:605357-605376 Msa0709440:CDS 45.0%
TTCAATTGAATGACCGTGGG+AGG + chr5_1:605476-605495 None:intergenic 45.0%
GGAGCAATCAAAATCCGAGT+CGG - chr5_1:606098-606117 Msa0709440:CDS 45.0%
AGCAATGAGTTTCTCCGACT+CGG + chr5_1:606115-606134 None:intergenic 45.0%
!! TGGTTATTGGTTGGTCTTGC+AGG - chr5_1:606280-606299 Msa0709440:intron 45.0%
CTTGTTGATCTTAGGGAGAG+TGG - chr5_1:606314-606333 Msa0709440:intron 45.0%
! AGTACTGCTCATTCGGCTTT+TGG - chr5_1:606589-606608 Msa0709440:CDS 45.0%
ACAAGTGAAGAGGACACATG+AGG - chr5_1:606612-606631 Msa0709440:CDS 45.0%
TTGCGACAGAGTCACTTATC+AGG - chr5_1:606665-606684 Msa0709440:CDS 45.0%
AGAGTCACTTATCAGGTGTG+TGG - chr5_1:606672-606691 Msa0709440:CDS 45.0%
! TTTGGGATATATGGGGATGC+GGG - chr5_1:606756-606775 Msa0709440:intron 45.0%
GTTCTTTGCCACATCTTCCT+CGG + chr5_1:606973-606992 None:intergenic 45.0%
! CAGTTCGATGGTGAGTATTG+TGG - chr5_1:607011-607030 Msa0709440:CDS 45.0%
TTCACGTTCTTCTGCAGATG+TGG + chr5_1:607284-607303 None:intergenic 45.0%
AAGCTGCTTCCATTGAACAC+AGG - chr5_1:607380-607399 Msa0709440:CDS 45.0%
AGCTGCTTCCATTGAACACA+GGG - chr5_1:607381-607400 Msa0709440:CDS 45.0%
TTCACATGCCCTGTGTTCAA+TGG + chr5_1:607392-607411 None:intergenic 45.0%
!! CTTACTGGTGTTGTACCACT+AGG + chr5_1:607530-607549 None:intergenic 45.0%
AAGAAGGGCTTCAATTGGCA+AGG + chr5_1:607600-607619 None:intergenic 45.0%
TCCTCAAGAAGGGCTTCAAT+TGG + chr5_1:607605-607624 None:intergenic 45.0%
AAGCCCTTCTTGAGGAATTC+CGG - chr5_1:607609-607628 Msa0709440:CDS 45.0%
TTCCCGGAATTCCTCAAGAA+GGG + chr5_1:607615-607634 None:intergenic 45.0%
TTTCCCGGAATTCCTCAAGA+AGG + chr5_1:607616-607635 None:intergenic 45.0%
GGAGAACGTGGAATAAGAGA+CGG + chr5_1:607680-607699 None:intergenic 45.0%
! GTAAGGGAATGGTAGCGTTC+GGG + chr5_1:601674-601693 None:intergenic 50.0%
! GGTAAGGGAATGGTAGCGTT+CGG + chr5_1:601675-601694 None:intergenic 50.0%
GTGAAAATGAGAGCGGGGTA+AGG + chr5_1:601691-601710 None:intergenic 50.0%
GGTGTGTGAAAATGAGAGCG+GGG + chr5_1:601696-601715 None:intergenic 50.0%
GGGTGTGTGAAAATGAGAGC+GGG + chr5_1:601697-601716 None:intergenic 50.0%
TTGCCGGCAAACACATCGAT+AGG - chr5_1:602044-602063 Msa0709440:CDS 50.0%
TGCCGGCAAACACATCGATA+GGG - chr5_1:602045-602064 Msa0709440:CDS 50.0%
GCTTATGGTCAAACCGGTAC+CGG - chr5_1:602287-602306 Msa0709440:CDS 50.0%
ATTGTAGAGTGGGCCGAATG+GGG - chr5_1:602483-602502 Msa0709440:intron 50.0%
AGAAGCAGGAGTGATTCCGA+GGG - chr5_1:602516-602535 Msa0709440:intron 50.0%
! GCAGATTTTTGACACGCTCG+AGG - chr5_1:602546-602565 Msa0709440:intron 50.0%
!! TACTGATTTGCTTGCTCCGG+AGG - chr5_1:602627-602646 Msa0709440:CDS 50.0%
AAAGCAGCTGCCTCTTATGG+AGG - chr5_1:602684-602703 Msa0709440:CDS 50.0%
TGGAGTTCTTGTGAGAGGGT+TGG - chr5_1:602717-602736 Msa0709440:intron 50.0%
AGTTCTTGTGAGAGGGTTGG+AGG - chr5_1:602720-602739 Msa0709440:intron 50.0%
CAGGGGTTGCTTCTTTGATG+TGG + chr5_1:602954-602973 None:intergenic 50.0%
ATATATCTCGTTCCGGCGCT+AGG - chr5_1:603034-603053 Msa0709440:intron 50.0%
TATATCTCGTTCCGGCGCTA+GGG - chr5_1:603035-603054 Msa0709440:intron 50.0%
ATGTATTACCTCCCTAGCGC+CGG + chr5_1:603049-603068 None:intergenic 50.0%
GCGAGTGATTAATGCCCTTG+TGG - chr5_1:603222-603241 Msa0709440:CDS 50.0%
! ATGACCAAGGTGCTCCACAA+GGG + chr5_1:603239-603258 None:intergenic 50.0%
! TATGACCAAGGTGCTCCACA+AGG + chr5_1:603240-603259 None:intergenic 50.0%
GGCTGATCAGATTGAGCAGA+TGG - chr5_1:604226-604245 Msa0709440:CDS 50.0%
GAACGGACATCTACAAGGTG+TGG - chr5_1:605077-605096 Msa0709440:intron 50.0%
TCAAATCGATAGCCGCCTAC+AGG + chr5_1:605333-605352 None:intergenic 50.0%
AAGCTCAGATGCATCGTTGG+AGG - chr5_1:605432-605451 Msa0709440:intron 50.0%
TCATCTGCCATATCCTCCCA+CGG - chr5_1:605460-605479 Msa0709440:intron 50.0%
TGAATGACCGTGGGAGGATA+TGG + chr5_1:605470-605489 None:intergenic 50.0%
CGATGGACATGTGTCATCAG+TGG - chr5_1:606358-606377 Msa0709440:CDS 50.0%
!! TGCAGCAAAGCATTGCCGTA+TGG - chr5_1:606466-606485 Msa0709440:intron 50.0%
!! AGCAAAGCATTGCCGTATGG+AGG - chr5_1:606469-606488 Msa0709440:intron 50.0%
! CGGCTTTTGGACAAGTGAAG+AGG - chr5_1:606602-606621 Msa0709440:CDS 50.0%
GTCACTTATCAGGTGTGTGG+TGG - chr5_1:606675-606694 Msa0709440:CDS 50.0%
TTGGGATATATGGGGATGCG+GGG - chr5_1:606757-606776 Msa0709440:intron 50.0%
ATGCGGGGGAGTGAGTTATA+TGG - chr5_1:606772-606791 Msa0709440:intron 50.0%
! CGATGGTGAGTATTGTGGTC+TGG - chr5_1:607016-607035 Msa0709440:CDS 50.0%
TTGCAGGACTATGAGCCTAG+TGG - chr5_1:607512-607531 Msa0709440:intron 50.0%
ACCAGTAAGATGTGAGCCTG+AGG - chr5_1:607541-607560 Msa0709440:CDS 50.0%
ACCTCAGGCTCACATCTTAC+TGG + chr5_1:607545-607564 None:intergenic 50.0%
TGAGCCTGAGGTTCCAAGTA+AGG - chr5_1:607553-607572 Msa0709440:CDS 50.0%
GAGCCTGAGGTTCCAAGTAA+GGG - chr5_1:607554-607573 Msa0709440:CDS 50.0%
GTACCCTTACTTGGAACCTC+AGG + chr5_1:607560-607579 None:intergenic 50.0%
GCCAATTGAAGCCCTTCTTG+AGG - chr5_1:607601-607620 Msa0709440:CDS 50.0%
AGCCCTTCTTGAGGAATTCC+GGG - chr5_1:607610-607629 Msa0709440:CDS 50.0%
AATTGGGTGAGAGGAGAACG+TGG + chr5_1:607692-607711 None:intergenic 50.0%
! GGTGGTGGTATCAACTTGCT+CGG - chr5_1:607720-607739 Msa0709440:intron 50.0%
ACTTGCTCGGTTGTCTGTTG+TGG - chr5_1:607733-607752 Msa0709440:intron 50.0%
ATGAGAGCGGGGTAAGGGAA+TGG + chr5_1:601685-601704 None:intergenic 55.0%
TCTGGAGGCAACTCCCCATT+CGG + chr5_1:602499-602518 None:intergenic 55.0%
GGAATCACTCCTGCTTCTGG+AGG + chr5_1:602514-602533 None:intergenic 55.0%
CTCGGAATCACTCCTGCTTC+TGG + chr5_1:602517-602536 None:intergenic 55.0%
CAGAAGCAGGAGTGATTCCG+AGG - chr5_1:602515-602534 Msa0709440:intron 55.0%
CAGCTGCCTCTTATGGAGGA+TGG - chr5_1:602688-602707 Msa0709440:CDS 55.0%
TAGGGTCGTGCTAGAGAAGC+TGG - chr5_1:603169-603188 Msa0709440:CDS 55.0%
! AATGCCCTTGTGGAGCACCT+TGG - chr5_1:603232-603251 Msa0709440:CDS 55.0%
! CAAGGTGCTTGCCAGTAGAG+AGG - chr5_1:604568-604587 Msa0709440:CDS 55.0%
TCAAGCGGAACTTGCCCAGA+AGG - chr5_1:605011-605030 Msa0709440:CDS 55.0%
GGCAAGCTCAGATGCATCGT+TGG - chr5_1:605429-605448 Msa0709440:intron 55.0%
CTTCTGTGGCCGCAGTTGTA+AGG + chr5_1:605608-605627 None:intergenic 55.0%
!! GCTGCAGGAGTACCTCCATA+CGG + chr5_1:606484-606503 None:intergenic 55.0%
!! TGGAGGTACTCCTGCAGCAA+AGG - chr5_1:606486-606505 Msa0709440:intron 55.0%
TGGGATATATGGGGATGCGG+GGG - chr5_1:606758-606777 Msa0709440:intron 55.0%
CCTCTGCAACATGCTGCACA+TGG + chr5_1:606929-606948 None:intergenic 55.0%
CCATGTGCAGCATGTTGCAG+AGG - chr5_1:606926-606945 Msa0709440:CDS 55.0%
CGTTCTTCTGCAGATGTGGC+TGG + chr5_1:607280-607299 None:intergenic 55.0%
! TTTTGGCAACTCCTCCCCCA+TGG - chr5_1:607911-607930 Msa0709440:five_prime_UTR 55.0%
TTTGGCAACTCCTCCCCCAT+GGG - chr5_1:607912-607931 Msa0709440:five_prime_UTR 55.0%
ACGAAGCAATGCGCCGCAAG+TGG - chr5_1:601976-601995 Msa0709440:CDS 60.0%
GCGGAACTTGCCCAGAAGGT+TGG - chr5_1:605015-605034 Msa0709440:CDS 60.0%
GAGACACATACACCGCCCTC+AGG + chr5_1:605372-605391 None:intergenic 60.0%
ACAACTGCGGCCACAGAAGC+TGG - chr5_1:605609-605628 Msa0709440:intron 60.0%
AGCAGCAGCCGAGGAAGATG+TGG - chr5_1:606962-606981 Msa0709440:CDS 60.0%
TTGGCAACTCCTCCCCCATG+GGG - chr5_1:607913-607932 Msa0709440:five_prime_UTR 60.0%
AACTCCTCCCCCATGGGGAA+GGG - chr5_1:607918-607937 Msa0709440:five_prime_UTR 60.0%
ATACACCGCCCCTTCCCCAT+GGG + chr5_1:607930-607949 None:intergenic 60.0%
AATACACCGCCCCTTCCCCA+TGG + chr5_1:607931-607950 None:intergenic 60.0%
GGGGAGTTGCCTCCAGAAGC+AGG - chr5_1:602502-602521 Msa0709440:intron 65.0%
ATCTCGTTCCGGCGCTAGGG+AGG - chr5_1:603038-603057 Msa0709440:intron 65.0%
TTCTGCACGAGCAGCAGCCG+AGG - chr5_1:606953-606972 Msa0709440:CDS 65.0%
CAACTCCTCCCCCATGGGGA+AGG - chr5_1:607917-607936 Msa0709440:five_prime_UTR 65.0%
ACTCCTCCCCCATGGGGAAG+GGG - chr5_1:607919-607938 Msa0709440:five_prime_UTR 65.0%
TACACCGCCCCTTCCCCATG+GGG + chr5_1:607929-607948 None:intergenic 65.0%
ACACCGCCCCTTCCCCATGG+GGG + chr5_1:607928-607947 None:intergenic 70.0%
CCTCCCCCATGGGGAAGGGG+CGG - chr5_1:607922-607941 Msa0709440:five_prime_UTR 75.0%
! CCGCCCCTTCCCCATGGGGG+AGG + chr5_1:607925-607944 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 601522 608097 601522 ID=Msa0709440;Name=Msa0709440
chr5_1 mRNA 601522 608097 601522 ID=Msa0709440-mRNA-1;Parent=Msa0709440;Name=Msa0709440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=270|1|1|1|1|1|23|379|1007
chr5_1 exon 601522 602101 601522 ID=Msa0709440-mRNA-1:exon:296;Parent=Msa0709440-mRNA-1
chr5_1 exon 602187 602338 602187 ID=Msa0709440-mRNA-1:exon:295;Parent=Msa0709440-mRNA-1
chr5_1 exon 602599 602708 602599 ID=Msa0709440-mRNA-1:exon:294;Parent=Msa0709440-mRNA-1
chr5_1 exon 602933 603034 602933 ID=Msa0709440-mRNA-1:exon:293;Parent=Msa0709440-mRNA-1
chr5_1 exon 603112 603317 603112 ID=Msa0709440-mRNA-1:exon:292;Parent=Msa0709440-mRNA-1
chr5_1 exon 603437 603520 603437 ID=Msa0709440-mRNA-1:exon:291;Parent=Msa0709440-mRNA-1
chr5_1 exon 603608 603766 603608 ID=Msa0709440-mRNA-1:exon:290;Parent=Msa0709440-mRNA-1
chr5_1 exon 603909 604016 603909 ID=Msa0709440-mRNA-1:exon:289;Parent=Msa0709440-mRNA-1
chr5_1 exon 604121 604282 604121 ID=Msa0709440-mRNA-1:exon:288;Parent=Msa0709440-mRNA-1
chr5_1 exon 604482 604657 604482 ID=Msa0709440-mRNA-1:exon:287;Parent=Msa0709440-mRNA-1
chr5_1 exon 604752 604838 604752 ID=Msa0709440-mRNA-1:exon:286;Parent=Msa0709440-mRNA-1
chr5_1 exon 604960 605071 604960 ID=Msa0709440-mRNA-1:exon:285;Parent=Msa0709440-mRNA-1
chr5_1 exon 605156 605236 605156 ID=Msa0709440-mRNA-1:exon:284;Parent=Msa0709440-mRNA-1
chr5_1 exon 605345 605398 605345 ID=Msa0709440-mRNA-1:exon:283;Parent=Msa0709440-mRNA-1
chr5_1 exon 605642 605718 605642 ID=Msa0709440-mRNA-1:exon:282;Parent=Msa0709440-mRNA-1
chr5_1 exon 605825 605894 605825 ID=Msa0709440-mRNA-1:exon:281;Parent=Msa0709440-mRNA-1
chr5_1 exon 606097 606253 606097 ID=Msa0709440-mRNA-1:exon:280;Parent=Msa0709440-mRNA-1
chr5_1 exon 606350 606447 606350 ID=Msa0709440-mRNA-1:exon:279;Parent=Msa0709440-mRNA-1
chr5_1 exon 606560 606698 606560 ID=Msa0709440-mRNA-1:exon:278;Parent=Msa0709440-mRNA-1
chr5_1 exon 606780 607129 606780 ID=Msa0709440-mRNA-1:exon:277;Parent=Msa0709440-mRNA-1
chr5_1 exon 607270 607428 607270 ID=Msa0709440-mRNA-1:exon:276;Parent=Msa0709440-mRNA-1
chr5_1 exon 607535 607664 607535 ID=Msa0709440-mRNA-1:exon:275;Parent=Msa0709440-mRNA-1
chr5_1 exon 607778 608097 607778 ID=Msa0709440-mRNA-1:exon:274;Parent=Msa0709440-mRNA-1
chr5_1 five_prime_UTR 607828 608097 607828 ID=Msa0709440-mRNA-1:five_prime_utr;Parent=Msa0709440-mRNA-1
chr5_1 CDS 607778 607827 607778 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 607535 607664 607535 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 607270 607428 607270 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 606780 607129 606780 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 606560 606698 606560 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 606350 606447 606350 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 606097 606253 606097 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 605825 605894 605825 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 605642 605718 605642 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 605345 605398 605345 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 605156 605236 605156 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 604960 605071 604960 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 604752 604838 604752 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 604482 604657 604482 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 604121 604282 604121 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 603909 604016 603909 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 603608 603766 603608 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 603437 603520 603437 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 603112 603317 603112 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 602933 603034 602933 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 602599 602708 602599 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 602187 602338 602187 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 CDS 601901 602101 601901 ID=Msa0709440-mRNA-1:cds;Parent=Msa0709440-mRNA-1
chr5_1 three_prime_UTR 601522 601900 601522 ID=Msa0709440-mRNA-1:three_prime_utr;Parent=Msa0709440-mRNA-1
Gene Sequence

>Msa0709440

ATGTCTGGTAAAGAAAAAGGTGTTAACGTTCAAGTTCTACTTCGTTGCAGGCCGTTTAGTGACGACGAGTTACGAAGCAATGCGCCGCAAGTGGTGACTTGTAACGATTACAGTAGAGAAGTTGCTGTTTCTCAGAATATTGCCGGCAAACACATCGATAGGGTTTTCACCTTCGACAAGGTTTTTGGTCCTTCTGCACAACAAAGAGAACTTTATGAACAAGCTGTTACACCGATAGTAAATGAAGTTTTAGAAGGATTTAATTGTACTATTTTTGCTTATGGTCAAACCGGTACCGGAAAAACATTTACCATGGAAGGAGAATGCAAAAGATCCAAGAGTGGGCCGAATGGGGAGTTGCCTCCAGAAGCAGGAGTGATTCCGAGGGCTGTTAAGCAGATTTTTGACACGCTCGAGGGTCAGAATGCTGAGTATAGTGTGAAAGTTACGTTTTTAGAATTGTATAATGAGGAGATTACTGATTTGCTTGCTCCGGAGGAAATTTCAAAGGTTAGTTTGGAGGAGAAGCAAAAAAAGCAGCTGCCTCTTATGGAGGATGGTAAAGGTGGAGTTCTTGTGAGAGGGTTGGAGGAAGAAATTGTGACGTGTGCGAGTGAAATTTATACTCTTCTCGAAAGAGGGTCTTCCAAAAGACGCACTGCAGAAACTTTACTTAACAAACAATCCAGTCGTTCACATTCGTTGTTTTCAATTACAATCCACATCAAAGAAGCAACCCCTGAAGGTGAAGAACTAATTAAGTGTGGTAAACTGAATTTGGTGGATCTTGCGGGTTCAGAAAATATATCTCGTTCCGGCGCTAGGGAGGGTCGTGCTAGAGAAGCTGGAGAGATTAATAAAAGTTTGCTTACATTAGGGCGAGTGATTAATGCCCTTGTGGAGCACCTTGGTCATATTCCATACAGGGATAGCAAGTTGACTCGTTTACTTCGTGATTCACTTGGGGGAAGAACCAAGACGTGCATTATAGCGACAGTATCCCCCGCTGTTCATTGCTTAGAAGAAACTTTGAGCACATTGGATTATGCACATAGGGCAAAGAACATTAAAAATAAGCCAGAGGTCAACCAAAAAATGATGAAATCAACTCTTATCAAGGATCTTTACGGTGAAATTGAACGCCTTAAGTCAGAGGTTTATGCTACTCGTGAGAAAAATGGGGTCTATATTCCAAAGGAAAGATACTATCAGGAAGAGATTGAGAAGAAGGCTATGGCTGATCAGATTGAGCAGATGGGCATCACAATTGAATCTTATCAGAAGCAACTTGAGGATATGAGAAACAAGTATGATGATCAAGTTCGTCAGTGCTCCGATTTAAGCAACAAACTTGATACCACTGAGAAAAACTTGAACAAGACTAGCAAGGTGCTTGCCAGTAGAGAGGAAGAACTAAAGAAGTGTCGATATACCGTCAATGAAAAGGAGTTCATCATATCTGAACAGAGAAAAGCAGAAAATGCCCTAGCTCATCAAGCATGTGTTTTACGAGCTGATTTAGAGAAAGCTCTTCAGGATAATGCTTCATTATTTGCGAAAATTGGTAGAGAAGATAAACTCAGCTCAGATAATAGAGCTGTAGTGAACAATTTTCAAGCGGAACTTGCCCAGAAGGTTGGTTCTCTTTGCAACACTGTTACAACATCGTTGTCTGAACAGAACGGACATCTACAAGGTGTGGAGAAGCTCTGCCATTCCTTTTTGGGAATTCATGATAAGGCGGCTATCGATTTGAAAGAGAAAATGAAAGACCTGAGGGCGGTGTATGTGTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCATAAGGCAAGCTCAGATGCATCGTTGGAGGAGTTATCATCTGCCATATCCTCCCACGGTCATTCAATTGAAGAATTCCTTACAACTGCGGCCACAGAAGCTGGCTCAATATTTGACGAGCTTCAGAGCTGTCTTTCAACACAACATGGTGAATTGACACTTTTTGCTAGGGAAGTACGCAATAGATTCAATCTTAGCGTGGAACAAATAAAGGAGATTTCTGAGCGATCGGAAGAATTAGTTGAAAAGCTTTTTGAAGAATCAAAAAATCTTGAAGAGTTTGTAGCACGGGCTGACCAAATGCAAACAGAGAGCATTGATGATTTTAAGAAAGCTTACGAGGAGCAATCAAAATCCGAGTCGGAGAAACTCATTGCTGATATGACTAGCTTGATTTCTGATCACATTCGTCGTCAAGTCCATCTTGTAGACTCAAAGCTTGTTGATCTTAGGGAGAGTGGCATAAAGAACAAGTCATTCTTCGATGGACATGTGTCATCAGTGGAAGATATTACAACCAATGCAAAAAGGAAATGGCAGTCCTTTTGCATACAAGCAGAAAAAGACGCAAAAGATACTGCTGATTACTCTGCAGCAAAGCATTGCCGTATGGAGGTACTCCTGCAGCAAAGTGTTAGTACTGCTCATTCGGCTTTTGGACAAGTGAAGAGGACACATGAGGCTGTAAATGAGTTAGGGGCCAAACATATTTTTGCGACAGAGTCACTTATCAGGAACGCTTGTGAGAGCCATGTGCAGCATGTTGCAGAGGTCAATTCTGCACGAGCAGCAGCCGAGGAAGATGTGGCAAAGAACACTGATGATTTTTTGCAGCAGTTCGATGCCACATCTGCAGAAGAACGTGAATCTGTATGTAGCGTCGTAAATGTTGTGAAAAGCCATGCAAATACACTTGAGATGTTTAGAGAGAATCACTCAGGGCAAGCTGCTTCCATTGAACACAGGGCATGTGAAACTTTTCAGCAGAATTATATGGACTATGAGCCTAGTGGTACAACACCAGTAAGATGTGAGCCTGAGGTTCCAAGTAAGGGTACAATAGACTCTCTTCGAACCTTGCCAATTGAAGCCCTTCTTGAGGAATTCCGGGAAAATAATTCATATGAATCTTCTTCTGATGTAAAGGAGTTGAAACCGTCTCTTATTCCACGTTCTCCTCTCACCCAATTGAATTAA

Protein sequence

>Msa0709440

MSGKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYSREVAVSQNIAGKHIDRVFTFDKVFGPSAQQRELYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTFTMEGECKRSKSGPNGELPPEAGVIPRAVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEEISKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTCASEIYTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKSEVYATREKNGVYIPKERYYQEEIEKKAMADQIEQMGITIESYQKQLEDMRNKYDDQVRQCSDLSNKLDTTEKNLNKTSKVLASREEELKKCRYTVNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFAKIGREDKLSSDNRAVVNNFQAELAQKVGSLCNTVTTSLSEQNGHLQGVEKLCHSFLGIHDKAAIDLKEKMKDLRAVYVSHIEAVQNVVRLHKASSDASLEELSSAISSHGHSIEEFLTTAATEAGSIFDELQSCLSTQHGELTLFAREVRNRFNLSVEQIKEISERSEELVEKLFEESKNLEEFVARADQMQTESIDDFKKAYEEQSKSESEKLIADMTSLISDHIRRQVHLVDSKLVDLRESGIKNKSFFDGHVSSVEDITTNAKRKWQSFCIQAEKDAKDTADYSAAKHCRMEVLLQQSVSTAHSAFGQVKRTHEAVNELGAKHIFATESLIRNACESHVQHVAEVNSARAAAEEDVAKNTDDFLQQFDATSAEERESVCSVVNVVKSHANTLEMFRENHSGQAASIEHRACETFQQNYMDYEPSGTTPVRCEPEVPSKGTIDSLRTLPIEALLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN*