Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046890 | sp|C6TBN2|AKR1_SOYBN | 76.190 | 357 | 70 | 5 | 8 | 361 | 2 | 346 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046890 | Msa0208510 | 0.831477 | 1.632910e-55 | -8.615850e-47 |
| Msa0046890 | Msa0481660 | 0.860041 | 2.722681e-63 | -8.615850e-47 |
| Msa0046890 | Msa0915360 | 0.808522 | 2.971762e-50 | -8.615850e-47 |
| Msa0046890 | Msa1038400 | 0.822943 | 1.807579e-53 | -8.615850e-47 |
| Msa0046890 | Msa1129360 | 0.855168 | 7.559980e-62 | -8.615850e-47 |
| Msa0046890 | Msa1350480 | 0.816527 | 5.281546e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046890 | MtrunA17_Chr7g0274071 | 94.737 | 361 | 9 | 1 | 1 | 361 | 1 | 351 | 0.0 | 702 |
| Msa0046890 | MtrunA17_Chr7g0274061 | 81.232 | 357 | 49 | 4 | 8 | 356 | 4 | 350 | 0.0 | 581 |
| Msa0046890 | MtrunA17_Chr1g0204651 | 62.428 | 346 | 117 | 3 | 13 | 355 | 5 | 340 | 2.29e-164 | 462 |
| Msa0046890 | MtrunA17_Chr7g0274041 | 63.689 | 347 | 111 | 5 | 13 | 355 | 7 | 342 | 2.81e-162 | 457 |
| Msa0046890 | MtrunA17_Chr7g0221791 | 56.725 | 342 | 129 | 7 | 16 | 354 | 7 | 332 | 3.59e-135 | 389 |
| Msa0046890 | MtrunA17_Chr7g0222171 | 55.652 | 345 | 134 | 7 | 13 | 354 | 4 | 332 | 3.56e-133 | 384 |
| Msa0046890 | MtrunA17_Chr7g0222121 | 51.596 | 376 | 129 | 8 | 16 | 354 | 7 | 366 | 7.60e-128 | 371 |
| Msa0046890 | MtrunA17_Chr7g0274081 | 78.173 | 197 | 39 | 2 | 164 | 356 | 2 | 198 | 2.37e-110 | 320 |
| Msa0046890 | MtrunA17_Chr7g0274091 | 81.373 | 102 | 18 | 1 | 9 | 109 | 5 | 106 | 4.94e-52 | 168 |
| Msa0046890 | MtrunA17_Chr7g0221781 | 52.713 | 129 | 59 | 2 | 13 | 141 | 4 | 130 | 7.64e-40 | 138 |
| Msa0046890 | MtrunA17_Chr7g0221771 | 50.909 | 110 | 50 | 2 | 245 | 354 | 1 | 106 | 3.52e-35 | 124 |
| Msa0046890 | MtrunA17_Chr7g0222141 | 51.376 | 109 | 52 | 1 | 135 | 242 | 31 | 139 | 5.44e-34 | 123 |
| Msa0046890 | MtrunA17_Chr1g0169691 | 29.664 | 327 | 201 | 10 | 17 | 328 | 5 | 317 | 4.29e-29 | 114 |
| Msa0046890 | MtrunA17_Chr7g0222151 | 58.667 | 75 | 31 | 0 | 246 | 320 | 2 | 76 | 2.26e-27 | 103 |
| Msa0046890 | MtrunA17_Chr3g0095421 | 29.167 | 336 | 190 | 13 | 16 | 326 | 38 | 350 | 1.59e-26 | 108 |
| Msa0046890 | MtrunA17_Chr3g0127491 | 27.554 | 323 | 200 | 12 | 25 | 330 | 46 | 351 | 3.25e-25 | 104 |
| Msa0046890 | MtrunA17_Chr8g0380261 | 27.193 | 342 | 205 | 13 | 22 | 325 | 48 | 383 | 6.71e-25 | 104 |
| Msa0046890 | MtrunA17_Chr1g0167421 | 28.443 | 334 | 190 | 13 | 18 | 312 | 66 | 389 | 1.61e-23 | 100 |
| Msa0046890 | MtrunA17_Chr4g0049341 | 27.632 | 304 | 181 | 10 | 18 | 311 | 6 | 280 | 4.69e-20 | 89.7 |
| Msa0046890 | MtrunA17_Chr4g0018921 | 26.246 | 301 | 171 | 10 | 37 | 324 | 20 | 282 | 5.33e-15 | 75.1 |
| Msa0046890 | MtrunA17_Chr7g0221801 | 53.125 | 64 | 29 | 1 | 18 | 81 | 9 | 71 | 8.10e-15 | 69.3 |
| Msa0046890 | MtrunA17_Chr3g0121001 | 27.273 | 297 | 163 | 13 | 54 | 335 | 44 | 302 | 3.59e-13 | 69.7 |
| Msa0046890 | MtrunA17_Chr6g0480011 | 26.727 | 333 | 175 | 15 | 13 | 324 | 6 | 290 | 2.88e-12 | 67.0 |
| Msa0046890 | MtrunA17_Chr4g0036051 | 28.829 | 333 | 169 | 15 | 16 | 326 | 3 | 289 | 8.50e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046890 | AT1G60710.1 | 58.841 | 345 | 126 | 5 | 13 | 354 | 7 | 338 | 2.17e-141 | 405 |
| Msa0046890 | AT1G60690.1 | 57.971 | 345 | 129 | 5 | 13 | 354 | 7 | 338 | 1.50e-140 | 403 |
| Msa0046890 | AT1G60680.1 | 54.958 | 353 | 142 | 6 | 13 | 361 | 7 | 346 | 1.63e-136 | 392 |
| Msa0046890 | AT1G60750.1 | 55.977 | 343 | 123 | 5 | 13 | 354 | 8 | 323 | 9.18e-136 | 390 |
| Msa0046890 | AT1G60730.1 | 55.942 | 345 | 136 | 5 | 13 | 354 | 7 | 338 | 6.16e-135 | 389 |
| Msa0046890 | AT1G60730.3 | 54.930 | 355 | 144 | 6 | 13 | 354 | 7 | 358 | 6.28e-134 | 387 |
| Msa0046890 | AT1G10810.1 | 53.846 | 351 | 146 | 5 | 13 | 360 | 7 | 344 | 4.94e-127 | 369 |
| Msa0046890 | AT1G10810.3 | 55.789 | 285 | 111 | 4 | 79 | 360 | 20 | 292 | 2.31e-107 | 317 |
| Msa0046890 | AT1G60680.2 | 60.714 | 224 | 76 | 3 | 13 | 235 | 7 | 219 | 5.95e-94 | 281 |
| Msa0046890 | AT1G10810.2 | 56.118 | 237 | 87 | 3 | 13 | 249 | 7 | 226 | 1.04e-86 | 263 |
| Msa0046890 | AT1G60730.2 | 53.571 | 140 | 64 | 1 | 13 | 152 | 7 | 145 | 9.99e-46 | 155 |
| Msa0046890 | AT1G04690.1 | 30.351 | 313 | 187 | 10 | 17 | 314 | 5 | 301 | 5.31e-30 | 117 |
| Msa0046890 | AT1G06690.1 | 28.319 | 339 | 197 | 12 | 16 | 330 | 49 | 365 | 1.82e-27 | 111 |
| Msa0046890 | AT5G53580.1 | 28.274 | 336 | 187 | 13 | 23 | 331 | 45 | 353 | 5.04e-27 | 110 |
| Msa0046890 | AT4G33670.1 | 26.625 | 323 | 194 | 11 | 18 | 326 | 9 | 302 | 1.12e-22 | 97.4 |
| Msa0046890 | AT1G04420.1 | 27.954 | 347 | 206 | 15 | 18 | 326 | 61 | 401 | 7.58e-20 | 90.5 |
| Msa0046890 | AT2G21260.1 | 27.003 | 337 | 170 | 15 | 16 | 326 | 3 | 289 | 2.83e-14 | 73.2 |
| Msa0046890 | AT2G37760.4 | 28.623 | 276 | 138 | 12 | 50 | 306 | 29 | 264 | 5.31e-13 | 69.3 |
| Msa0046890 | AT2G37760.3 | 28.623 | 276 | 138 | 12 | 50 | 306 | 29 | 264 | 5.31e-13 | 69.3 |
| Msa0046890 | AT2G37760.5 | 28.623 | 276 | 138 | 12 | 50 | 306 | 29 | 264 | 6.06e-13 | 68.9 |
| Msa0046890 | AT2G21250.1 | 27.628 | 333 | 173 | 15 | 16 | 326 | 3 | 289 | 6.78e-13 | 68.9 |
| Msa0046890 | AT2G37760.2 | 28.623 | 276 | 138 | 12 | 50 | 306 | 29 | 264 | 7.50e-13 | 68.9 |
| Msa0046890 | AT2G37760.1 | 28.623 | 276 | 138 | 12 | 50 | 306 | 29 | 264 | 7.50e-13 | 68.9 |
| Msa0046890 | AT2G21260.2 | 27.897 | 233 | 121 | 9 | 114 | 326 | 16 | 221 | 1.29e-12 | 67.4 |
Find 100 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATCCCTTAGTATTTA+TGG | 0.040654 | 1_1:+79313456 | None:intergenic |
| TTTGACACTGCTGATGTTTA+TGG | 0.130046 | 1_1:-79316095 | Msa0046890:CDS |
| CGATGGTGGGAATGAAATTT+TGG | 0.194348 | 1_1:-79316069 | Msa0046890:CDS |
| ATCCAGGTGGCTACAAAATT+TGG | 0.216306 | 1_1:-79315813 | Msa0046890:CDS |
| TCCCATACCACCGGCACTTC+TGG | 0.235548 | 1_1:+79315785 | None:intergenic |
| GTTGAGACCGTTGAAACTTT+TGG | 0.258801 | 1_1:+79313632 | None:intergenic |
| ACTTGGAACCCAAGGCTTTC+AGG | 0.279174 | 1_1:-79316332 | Msa0046890:intron |
| TGTGCTCTCCTTATTGTATC+AGG | 0.290458 | 1_1:+79315325 | None:intergenic |
| GATCCTCTTCCTGAAGAAAT+TGG | 0.293230 | 1_1:-79316161 | Msa0046890:CDS |
| TAGGTTTCAAAATTCGGTTT+AGG | 0.304608 | 1_1:-79316212 | Msa0046890:CDS |
| AGGTTTCAAAATTCGGTTTA+GGG | 0.317344 | 1_1:-79316211 | Msa0046890:CDS |
| AACAACTAAGATTGAGAATC+TGG | 0.331104 | 1_1:-79313798 | Msa0046890:CDS |
| TGTTTGTGTTGCGGTCATTT+TGG | 0.342332 | 1_1:+79316387 | None:intergenic |
| ACGGAAATGCCAATTTCTTC+AGG | 0.353338 | 1_1:+79316152 | None:intergenic |
| CGAAGATGTGCCGAGCTTCA+TGG | 0.363687 | 1_1:-79314947 | Msa0046890:intron |
| ACTGAATGCATGCTTAATTA+CGG | 0.364560 | 1_1:+79316133 | None:intergenic |
| AATGCACTTGATCATGAATA+AGG | 0.365496 | 1_1:-79313582 | Msa0046890:three_prime_UTR |
| CCTTTACCAAGTGGACTATA+TGG | 0.375897 | 1_1:+79314994 | None:intergenic |
| TGATACAGAGAGCTTGGTAT+TGG | 0.386936 | 1_1:-79315024 | Msa0046890:intron |
| AAAATTCGGTTTAGGGTGTA+TGG | 0.387624 | 1_1:-79316204 | Msa0046890:CDS |
| GAGGGAAAAGTTAAGTATAT+TGG | 0.391690 | 1_1:-79315364 | Msa0046890:CDS |
| ATCCTCCTCTGTGTGTCAGC+GGG | 0.392134 | 1_1:+79316525 | None:intergenic |
| AAGGATGTTGTGCCTATTCC+TGG | 0.394764 | 1_1:-79314487 | Msa0046890:intron |
| GGTAGGTGAACTTAAGAAAC+TGG | 0.404929 | 1_1:-79315392 | Msa0046890:CDS |
| ATCCAGAAGTGCCGGTGGTA+TGG | 0.406125 | 1_1:-79315787 | Msa0046890:CDS |
| AAGCCAGCCCTGATACAATA+AGG | 0.414769 | 1_1:-79315333 | Msa0046890:CDS |
| CCGCTTCCAAGCTGAGAACT+TGG | 0.415734 | 1_1:-79314608 | Msa0046890:CDS |
| CTACCTGCTATATCATCTTC+AGG | 0.426229 | 1_1:+79313707 | None:intergenic |
| GCACAACATCCTTGCCTTGT+TGG | 0.434088 | 1_1:+79314497 | None:intergenic |
| TCTATTTGTAAAGCTGTGAT+AGG | 0.434957 | 1_1:+79315292 | None:intergenic |
| TACAAATAGAGTGGTCTCTC+TGG | 0.437707 | 1_1:-79315279 | Msa0046890:CDS |
| GATTTGAATCAAATTCTCAT+AGG | 0.443062 | 1_1:-79313441 | Msa0046890:three_prime_UTR |
| TCCTTAACTGTATCCTCAAT+AGG | 0.446629 | 1_1:+79315654 | None:intergenic |
| TCTCCTTATTGTATCAGGGC+TGG | 0.459103 | 1_1:+79315330 | None:intergenic |
| AGGCGTGTTAGCAAACTTCC+AGG | 0.460821 | 1_1:+79313655 | None:intergenic |
| GCCTATTGAGGATACAGTTA+AGG | 0.469796 | 1_1:-79315655 | Msa0046890:CDS |
| CCATATAGTCCACTTGGTAA+AGG | 0.481916 | 1_1:-79314994 | Msa0046890:CDS |
| ATGCCAATTTCTTCAGGAAG+AGG | 0.491719 | 1_1:+79316158 | None:intergenic |
| TCCAGAAGTGCCGGTGGTAT+GGG | 0.494504 | 1_1:-79315786 | Msa0046890:CDS |
| TTAGATGAATGTGAATGAAA+TGG | 0.500630 | 1_1:-79313410 | Msa0046890:three_prime_UTR |
| CAAGTTCTCAGCTTGGAAGC+GGG | 0.500791 | 1_1:+79314609 | None:intergenic |
| CTAATTCCTCATGTCACACT+TGG | 0.500882 | 1_1:-79316349 | Msa0046890:CDS |
| ATTAAGCATGCATTCAGTAA+AGG | 0.507501 | 1_1:-79316128 | Msa0046890:CDS |
| AGAACAAGGTTATATATGAT+AGG | 0.508380 | 1_1:-79314582 | Msa0046890:CDS |
| ACGAGATAGTTCCTCTCTGC+AGG | 0.515403 | 1_1:-79315240 | Msa0046890:intron |
| CGATACAACTGTGCCTATTG+AGG | 0.516697 | 1_1:-79315667 | Msa0046890:CDS |
| CCAAGTTCTCAGCTTGGAAG+CGG | 0.517525 | 1_1:+79314608 | None:intergenic |
| TCTTGACCAAGTTCTCAGCT+TGG | 0.528939 | 1_1:+79314602 | None:intergenic |
| GTGCTCTCCTTATTGTATCA+GGG | 0.530977 | 1_1:+79315326 | None:intergenic |
| ACCTTTGATTCCCATACCAC+CGG | 0.535653 | 1_1:+79315776 | None:intergenic |
| TCATTCACATTCATCTAACA+TGG | 0.540927 | 1_1:+79313415 | None:intergenic |
| TTTCATTCCATAAATACTAA+GGG | 0.543696 | 1_1:-79313463 | Msa0046890:three_prime_UTR |
| ATGGAATGGATAGTTTATCC+TGG | 0.545904 | 1_1:-79313673 | Msa0046890:CDS |
| CTGCTCAGTTAGCATTAGCA+TGG | 0.546251 | 1_1:-79314525 | Msa0046890:CDS |
| GGGTGTATGGCCCTCAGTGG+AGG | 0.554437 | 1_1:-79316191 | Msa0046890:CDS |
| CACGCCTCCAAAAGTTTCAA+CGG | 0.555051 | 1_1:-79313639 | Msa0046890:CDS |
| ACTTAAGAAACTGGTGGACG+AGG | 0.557105 | 1_1:-79315383 | Msa0046890:CDS |
| TTGTGTTTGTGTTTGTGTTG+CGG | 0.560555 | 1_1:+79316378 | None:intergenic |
| TGATGATACCTGAAAGCCTT+GGG | 0.564484 | 1_1:+79316324 | None:intergenic |
| GCCGGTGGTATGGGAATCAA+AGG | 0.566837 | 1_1:-79315777 | Msa0046890:CDS |
| CATGTCACACTTGGAACCCA+AGG | 0.578508 | 1_1:-79316340 | Msa0046890:CDS |
| GTTCCTGAAGATGATATAGC+AGG | 0.578538 | 1_1:-79313710 | Msa0046890:CDS |
| TATGGGAATCAAAGGTTCAC+CGG | 0.579317 | 1_1:-79315769 | Msa0046890:CDS |
| TCCTCCTCTGTGTGTCAGCG+GGG | 0.579998 | 1_1:+79316526 | None:intergenic |
| ACTATCAGAAGAGGACATGC+GGG | 0.584092 | 1_1:-79313747 | Msa0046890:CDS |
| GAGAATCTGGATCAAAACCT+TGG | 0.589578 | 1_1:-79313785 | Msa0046890:CDS |
| CAGCTTGAACGCACATACTC+CGG | 0.590970 | 1_1:+79315750 | None:intergenic |
| TTTGGTATATCCAGAAGTGC+CGG | 0.592216 | 1_1:-79315795 | Msa0046890:CDS |
| TGAGAACTTGGTCAAGAACA+AGG | 0.594858 | 1_1:-79314596 | Msa0046890:CDS |
| AGCAGTGAAACTATCAGAAG+AGG | 0.596544 | 1_1:-79313756 | Msa0046890:CDS |
| ACTTCCCAGAGAAAAGATCC+AGG | 0.597330 | 1_1:-79315829 | Msa0046890:CDS |
| ATCATTATAACCTCCACTGA+GGG | 0.598759 | 1_1:+79316181 | None:intergenic |
| TAGTAGATACTACAATGGAA+TGG | 0.602882 | 1_1:-79313687 | Msa0046890:CDS |
| TATCCTCCTCTGTGTGTCAG+CGG | 0.607033 | 1_1:+79316524 | None:intergenic |
| CCTCCTCTGTGTGTCAGCGG+GGG | 0.607663 | 1_1:+79316527 | None:intergenic |
| ATGGGTACTCCAACAAGGCA+AGG | 0.611881 | 1_1:-79314506 | Msa0046890:CDS |
| GATGTTTATGGACTCGATGG+TGG | 0.612735 | 1_1:-79316083 | Msa0046890:CDS |
| ATTGTACCATATAGTCCACT+TGG | 0.612810 | 1_1:-79315000 | Msa0046890:CDS |
| AAGTTCTCAGCTTGGAAGCG+GGG | 0.613856 | 1_1:+79314610 | None:intergenic |
| AAATGCTATACCATGAAGCT+CGG | 0.620782 | 1_1:+79314937 | None:intergenic |
| ATGTTTATGGACTCGATGGT+GGG | 0.621527 | 1_1:-79316082 | Msa0046890:CDS |
| GAAAGTCTTAGCAAGAAGCA+TGG | 0.623738 | 1_1:-79314556 | Msa0046890:CDS |
| AACTATCAGAAGAGGACATG+CGG | 0.624051 | 1_1:-79313748 | Msa0046890:CDS |
| CTTAAGAAACTGGTGGACGA+GGG | 0.626596 | 1_1:-79315382 | Msa0046890:CDS |
| TCTCTGGACTCGCGACATTG+AGG | 0.626799 | 1_1:-79315263 | Msa0046890:CDS |
| GCTGATGTTTATGGACTCGA+TGG | 0.627574 | 1_1:-79316086 | Msa0046890:CDS |
| TGCTCAGTTAGCATTAGCAT+GGG | 0.633628 | 1_1:-79314524 | Msa0046890:CDS |
| GTGATGATACCTGAAAGCCT+TGG | 0.646270 | 1_1:+79316323 | None:intergenic |
| TCACAGCTTTACAAATAGAG+TGG | 0.653310 | 1_1:-79315288 | Msa0046890:CDS |
| TTAGGGTGTATGGCCCTCAG+TGG | 0.653469 | 1_1:-79316194 | Msa0046890:CDS |
| GAGGAGGATATCACAAAGCG+AGG | 0.654372 | 1_1:-79316511 | Msa0046890:five_prime_UTR |
| AGGTGAACTTAAGAAACTGG+TGG | 0.677931 | 1_1:-79315389 | Msa0046890:CDS |
| GTTTCACTGCTAATGCACCA+AGG | 0.681712 | 1_1:+79313768 | None:intergenic |
| TGGGTTCCAAGTGTGACATG+AGG | 0.682273 | 1_1:+79316343 | None:intergenic |
| GCAGGTAGTAGATACTACAA+TGG | 0.684368 | 1_1:-79313692 | Msa0046890:CDS |
| TTAGCATGGGTACTCCAACA+AGG | 0.686154 | 1_1:-79314511 | Msa0046890:CDS |
| GGTATATCCAGAAGTGCCGG+TGG | 0.696646 | 1_1:-79315792 | Msa0046890:CDS |
| GATCATTATAACCTCCACTG+AGG | 0.735023 | 1_1:+79316180 | None:intergenic |
| ACTCGAACTAACCTGCAGAG+AGG | 0.749098 | 1_1:+79315229 | None:intergenic |
| TCCCAGAGAAAAGATCCAGG+TGG | 0.757635 | 1_1:-79315826 | Msa0046890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTGTTTTTATTATAGTT+AGG | + | chr1_1:79315745-79315764 | None:intergenic | 10.0% |
| !!! | TTTTATTCTTGAAAATATTA+TGG | - | chr1_1:79316102-79316121 | Msa0046890:CDS | 10.0% |
| !!! | TCTATTGTTGTTTTTATTTT+AGG | - | chr1_1:79313710-79313729 | Msa0046890:CDS | 15.0% |
| !!! | TTATTTTAGGTTTCAAAATT+CGG | - | chr1_1:79313723-79313742 | Msa0046890:CDS | 15.0% |
| !!! | ATATCTTTTATGTTCTAAAT+TGG | - | chr1_1:79314004-79314023 | Msa0046890:intron | 15.0% |
| !! | AAAGAAAAAAAAACTCAAAT+TGG | + | chr1_1:79314052-79314071 | None:intergenic | 15.0% |
| !!! | ATAAACTTTTTAAAAAGGAA+AGG | + | chr1_1:79315271-79315290 | None:intergenic | 15.0% |
| !!! | ACAACATAAACTTTTTAAAA+AGG | + | chr1_1:79315276-79315295 | None:intergenic | 15.0% |
| !! | AAAAAGCTGAAAATAAAATT+AGG | + | chr1_1:79316084-79316103 | None:intergenic | 15.0% |
| !! | TATAGAGAGAAGAATATAAA+TGG | + | chr1_1:79313671-79313690 | None:intergenic | 20.0% |
| !! | TTAATATTTACTCATTTGTC+CGG | + | chr1_1:79313976-79313995 | None:intergenic | 20.0% |
| !!! | TTTATGTTCTAAATTGGATA+CGG | - | chr1_1:79314010-79314029 | Msa0046890:intron | 20.0% |
| !!! | ATTCAAGTTTGAAGATTATT+TGG | - | chr1_1:79314483-79314502 | Msa0046890:intron | 20.0% |
| !! | TAACAAGTTTATTGTGTTAT+AGG | - | chr1_1:79314528-79314547 | Msa0046890:CDS | 20.0% |
| !! | CTTGATCATGAATTAAATAT+TGG | - | chr1_1:79315113-79315132 | Msa0046890:intron | 20.0% |
| !!! | TCTAACAAAAGTGTATTTTT+TGG | + | chr1_1:79315714-79315733 | None:intergenic | 20.0% |
| !! | TAACAATTTATCACATAGTT+TGG | - | chr1_1:79315786-79315805 | Msa0046890:CDS | 20.0% |
| !! | ATGTAACGTTATAAATCATA+CGG | - | chr1_1:79315888-79315907 | Msa0046890:intron | 20.0% |
| !! | TAAAAATTTAGAAGAACCTT+TGG | + | chr1_1:79316019-79316038 | None:intergenic | 20.0% |
| !!! | TTTTCATTCCATAAATACTA+AGG | - | chr1_1:79316477-79316496 | Msa0046890:intron | 20.0% |
| !! | TTTCATTCCATAAATACTAA+GGG | - | chr1_1:79316478-79316497 | Msa0046890:intron | 20.0% |
| ! | CAACACAATCAAATAATGAA+AGG | + | chr1_1:79314076-79314095 | None:intergenic | 25.0% |
| !!! | ATTATTTGATTGTGTTGACT+AGG | - | chr1_1:79314079-79314098 | Msa0046890:intron | 25.0% |
| ! | CATGTTAATTCTTACTGATA+TGG | - | chr1_1:79314374-79314393 | Msa0046890:intron | 25.0% |
| ! | AAGTTTATTGTGTTATAGGT+AGG | - | chr1_1:79314532-79314551 | Msa0046890:CDS | 25.0% |
| ! | ATGTCTTAACAGTAATTCTA+TGG | + | chr1_1:79315065-79315084 | None:intergenic | 25.0% |
| ! | GATCAATGCTATTACATAAT+TGG | + | chr1_1:79315089-79315108 | None:intergenic | 25.0% |
| ! | TTAAACTTGAGTAATGTTAC+AGG | - | chr1_1:79315180-79315199 | Msa0046890:intron | 25.0% |
| ! | TAAACTTGAGTAATGTTACA+GGG | - | chr1_1:79315181-79315200 | Msa0046890:intron | 25.0% |
| ! | CATGTGAGAAAAAACAAATA+AGG | + | chr1_1:79315215-79315234 | None:intergenic | 25.0% |
| ! | AGAACAAGGTTATATATGAT+AGG | - | chr1_1:79315359-79315378 | Msa0046890:CDS | 25.0% |
| ! | TGTTCAGATTCATAAATAAG+AGG | + | chr1_1:79315584-79315603 | None:intergenic | 25.0% |
| ! | TTCTTAATTGTTAGGATACA+TGG | + | chr1_1:79315620-79315639 | None:intergenic | 25.0% |
| ! | TATCACATAGTTTGGTTAAT+TGG | - | chr1_1:79315794-79315813 | Msa0046890:CDS | 25.0% |
| ! | CTCTTAATATATGAAATGCA+AGG | + | chr1_1:79315969-79315988 | None:intergenic | 25.0% |
| ! | AAGCTGAAAATAAAATTAGG+TGG | + | chr1_1:79316081-79316100 | None:intergenic | 25.0% |
| !! | ACTAAAAGAGATTTTACTTC+AGG | + | chr1_1:79316334-79316353 | None:intergenic | 25.0% |
| !! | GAAGTAAAATCTCTTTTAGT+TGG | - | chr1_1:79316334-79316353 | Msa0046890:CDS | 25.0% |
| ! | TTCAAATCCCTTAGTATTTA+TGG | + | chr1_1:79316488-79316507 | None:intergenic | 25.0% |
| ! | GATTTGAATCAAATTCTCAT+AGG | - | chr1_1:79316500-79316519 | Msa0046890:intron | 25.0% |
| ! | TTAGATGAATGTGAATGAAA+TGG | - | chr1_1:79316531-79316550 | Msa0046890:five_prime_UTR | 25.0% |
| TCACTGCAAAATGCAAAAAT+TGG | - | chr1_1:79313507-79313526 | Msa0046890:three_prime_UTR | 30.0% | |
| TAGGTTTCAAAATTCGGTTT+AGG | - | chr1_1:79313729-79313748 | Msa0046890:CDS | 30.0% | |
| AGGTTTCAAAATTCGGTTTA+GGG | - | chr1_1:79313730-79313749 | Msa0046890:CDS | 30.0% | |
| ACTGAATGCATGCTTAATTA+CGG | + | chr1_1:79313811-79313830 | None:intergenic | 30.0% | |
| ATTAAGCATGCATTCAGTAA+AGG | - | chr1_1:79313813-79313832 | Msa0046890:intron | 30.0% | |
| !!! | GAATGAAATTTTGGTTGGAA+AGG | - | chr1_1:79313881-79313900 | Msa0046890:intron | 30.0% |
| CTAATCATAGCTACAAGAAT+CGG | - | chr1_1:79313914-79313933 | Msa0046890:intron | 30.0% | |
| TGAGAGTCCCAAATTATAAA+TGG | - | chr1_1:79314410-79314429 | Msa0046890:intron | 30.0% | |
| GAGAGTCCCAAATTATAAAT+GGG | - | chr1_1:79314411-79314430 | Msa0046890:intron | 30.0% | |
| GAGTCTCCCATTTATAATTT+GGG | + | chr1_1:79314420-79314439 | None:intergenic | 30.0% | |
| AAAACCAGTTTATAGAGGTA+GGG | + | chr1_1:79314443-79314462 | None:intergenic | 30.0% | |
| !!! | CTCTATAAACTGGTTTTGTA+GGG | - | chr1_1:79314446-79314465 | Msa0046890:intron | 30.0% |
| GAGGGAAAAGTTAAGTATAT+TGG | - | chr1_1:79314577-79314596 | Msa0046890:CDS | 30.0% | |
| TCTATTTGTAAAGCTGTGAT+AGG | + | chr1_1:79314652-79314671 | None:intergenic | 30.0% | |
| TTGAACAACTTTCATTGATG+AGG | - | chr1_1:79314798-79314817 | Msa0046890:intron | 30.0% | |
| AAACTTGAGTAATGTTACAG+GGG | - | chr1_1:79315182-79315201 | Msa0046890:intron | 30.0% | |
| ! | CTCATATTTCTGATACTGTT+AGG | + | chr1_1:79315557-79315576 | None:intergenic | 30.0% |
| ATGGTGCATTCTTAATTGTT+AGG | + | chr1_1:79315628-79315647 | None:intergenic | 30.0% | |
| ! | ACAACGATAGAAGAAGTATA+TGG | + | chr1_1:79315647-79315666 | None:intergenic | 30.0% |
| AACAACTAAGATTGAGAATC+TGG | - | chr1_1:79316143-79316162 | Msa0046890:CDS | 30.0% | |
| TAGTAGATACTACAATGGAA+TGG | - | chr1_1:79316254-79316273 | Msa0046890:intron | 30.0% | |
| AATGCACTTGATCATGAATA+AGG | - | chr1_1:79316359-79316378 | Msa0046890:CDS | 30.0% | |
| TCATTCACATTCATCTAACA+TGG | + | chr1_1:79316529-79316548 | None:intergenic | 30.0% | |
| TTGTGTTTGTGTTTGTGTTG+CGG | + | chr1_1:79313566-79313585 | None:intergenic | 35.0% | |
| ! | AAAATTCGGTTTAGGGTGTA+TGG | - | chr1_1:79313737-79313756 | Msa0046890:CDS | 35.0% |
| ATCATTATAACCTCCACTGA+GGG | + | chr1_1:79313763-79313782 | None:intergenic | 35.0% | |
| TTTGACACTGCTGATGTTTA+TGG | - | chr1_1:79313846-79313865 | Msa0046890:intron | 35.0% | |
| TCCTTAACTGTATCCTCAAT+AGG | + | chr1_1:79314290-79314309 | None:intergenic | 35.0% | |
| GGAGTCTCCCATTTATAATT+TGG | + | chr1_1:79314421-79314440 | None:intergenic | 35.0% | |
| AAACCAGTTTATAGAGGTAG+GGG | + | chr1_1:79314442-79314461 | None:intergenic | 35.0% | |
| CAAAACCAGTTTATAGAGGT+AGG | + | chr1_1:79314444-79314463 | None:intergenic | 35.0% | |
| CCTACAAAACCAGTTTATAG+AGG | + | chr1_1:79314448-79314467 | None:intergenic | 35.0% | |
| !!! | CCTCTATAAACTGGTTTTGT+AGG | - | chr1_1:79314445-79314464 | Msa0046890:intron | 35.0% |
| TCACAGCTTTACAAATAGAG+TGG | - | chr1_1:79314653-79314672 | Msa0046890:intron | 35.0% | |
| GTTACTCAGGGTTAAAGAAA+TGG | - | chr1_1:79314822-79314841 | Msa0046890:intron | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | - | chr1_1:79314911-79314930 | Msa0046890:intron | 35.0% |
| ATTGTACCATATAGTCCACT+TGG | - | chr1_1:79314941-79314960 | Msa0046890:intron | 35.0% | |
| GCAAAAAAACCTTTACCAAG+TGG | + | chr1_1:79314959-79314978 | None:intergenic | 35.0% | |
| !!! | CTTGGTAAAGGTTTTTTTGC+TGG | - | chr1_1:79314959-79314978 | Msa0046890:CDS | 35.0% |
| !!! | AAAGGTTTTTTTGCTGGCAA+AGG | - | chr1_1:79314965-79314984 | Msa0046890:CDS | 35.0% |
| AAATGCTATACCATGAAGCT+CGG | + | chr1_1:79315007-79315026 | None:intergenic | 35.0% | |
| ! | TTTTGTAACTCACCAGGAAT+AGG | + | chr1_1:79315469-79315488 | None:intergenic | 35.0% |
| ! | TGCATATTTTGTAACTCACC+AGG | + | chr1_1:79315475-79315494 | None:intergenic | 35.0% |
| TTTGATTGCAGTCTCTTAAC+TGG | - | chr1_1:79315528-79315547 | Msa0046890:intron | 35.0% | |
| TACAACAATCACTCTGTTGT+CGG | + | chr1_1:79315830-79315849 | None:intergenic | 35.0% | |
| ATTACAAGTTTACCCCTTGT+TGG | - | chr1_1:79315916-79315935 | Msa0046890:intron | 35.0% | |
| TGACTCATATTCACCAACAA+GGG | + | chr1_1:79315932-79315951 | None:intergenic | 35.0% | |
| ATGACTCATATTCACCAACA+AGG | + | chr1_1:79315933-79315952 | None:intergenic | 35.0% | |
| ! | TATGGACTTCTTTTGTTCTC+AGG | - | chr1_1:79316120-79316139 | Msa0046890:CDS | 35.0% |
| ATGGAATGGATAGTTTATCC+TGG | - | chr1_1:79316268-79316287 | Msa0046890:intron | 35.0% | |
| ! | TGTTTGTGTTGCGGTCATTT+TGG | + | chr1_1:79313557-79313576 | None:intergenic | 40.0% |
| CTAATTCCTCATGTCACACT+TGG | - | chr1_1:79313592-79313611 | Msa0046890:three_prime_UTR | 40.0% | |
| TGATGATACCTGAAAGCCTT+GGG | + | chr1_1:79313620-79313639 | None:intergenic | 40.0% | |
| GATCATTATAACCTCCACTG+AGG | + | chr1_1:79313764-79313783 | None:intergenic | 40.0% | |
| GATCCTCTTCCTGAAGAAAT+TGG | - | chr1_1:79313780-79313799 | Msa0046890:CDS | 40.0% | |
| ATGCCAATTTCTTCAGGAAG+AGG | + | chr1_1:79313786-79313805 | None:intergenic | 40.0% | |
| ACGGAAATGCCAATTTCTTC+AGG | + | chr1_1:79313792-79313811 | None:intergenic | 40.0% | |
| ATGTTTATGGACTCGATGGT+GGG | - | chr1_1:79313859-79313878 | Msa0046890:intron | 40.0% | |
| !!! | CGATGGTGGGAATGAAATTT+TGG | - | chr1_1:79313872-79313891 | Msa0046890:intron | 40.0% |
| !! | GGTGGGAATGAAATTTTGGT+TGG | - | chr1_1:79313876-79313895 | Msa0046890:intron | 40.0% |
| ATCATAGCTACAAGAATCGG+AGG | - | chr1_1:79313917-79313936 | Msa0046890:intron | 40.0% | |
| ATCCAGGTGGCTACAAAATT+TGG | - | chr1_1:79314128-79314147 | Msa0046890:intron | 40.0% | |
| ! | TACCAAATTTTGTAGCCACC+TGG | + | chr1_1:79314133-79314152 | None:intergenic | 40.0% |
| ! | TTTGGTATATCCAGAAGTGC+CGG | - | chr1_1:79314146-79314165 | Msa0046890:intron | 40.0% |
| TATGGGAATCAAAGGTTCAC+CGG | - | chr1_1:79314172-79314191 | Msa0046890:intron | 40.0% | |
| GCCTATTGAGGATACAGTTA+AGG | - | chr1_1:79314286-79314305 | Msa0046890:intron | 40.0% | |
| GGTAGGTGAACTTAAGAAAC+TGG | - | chr1_1:79314549-79314568 | Msa0046890:CDS | 40.0% | |
| AGGTGAACTTAAGAAACTGG+TGG | - | chr1_1:79314552-79314571 | Msa0046890:CDS | 40.0% | |
| GTGCTCTCCTTATTGTATCA+GGG | + | chr1_1:79314618-79314637 | None:intergenic | 40.0% | |
| TGTGCTCTCCTTATTGTATC+AGG | + | chr1_1:79314619-79314638 | None:intergenic | 40.0% | |
| TACAAATAGAGTGGTCTCTC+TGG | - | chr1_1:79314662-79314681 | Msa0046890:intron | 40.0% | |
| CTTATCCTGTGAACTTAGAG+AGG | + | chr1_1:79314739-79314758 | None:intergenic | 40.0% | |
| TCATTGATGAGGAGTTACTC+AGG | - | chr1_1:79314809-79314828 | Msa0046890:intron | 40.0% | |
| CATTGATGAGGAGTTACTCA+GGG | - | chr1_1:79314810-79314829 | Msa0046890:intron | 40.0% | |
| GAAATGGAACTGATTGCTCT+TGG | - | chr1_1:79314838-79314857 | Msa0046890:intron | 40.0% | |
| TGATACAGAGAGCTTGGTAT+TGG | - | chr1_1:79314917-79314936 | Msa0046890:intron | 40.0% | |
| !! | CCTTTACCAAGTGGACTATA+TGG | + | chr1_1:79314950-79314969 | None:intergenic | 40.0% |
| CCATATAGTCCACTTGGTAA+AGG | - | chr1_1:79314947-79314966 | Msa0046890:intron | 40.0% | |
| TGAGAACTTGGTCAAGAACA+AGG | - | chr1_1:79315345-79315364 | Msa0046890:CDS | 40.0% | |
| GAAAGTCTTAGCAAGAAGCA+TGG | - | chr1_1:79315385-79315404 | Msa0046890:CDS | 40.0% | |
| TGCTCAGTTAGCATTAGCAT+GGG | - | chr1_1:79315417-79315436 | Msa0046890:intron | 40.0% | |
| GACTCATATTCACCAACAAG+GGG | + | chr1_1:79315931-79315950 | None:intergenic | 40.0% | |
| GTACTCAGGTTACTAACCAA+AGG | - | chr1_1:79316000-79316019 | Msa0046890:intron | 40.0% | |
| ! | TTAGGTGGAAAGCATATGCA+TGG | + | chr1_1:79316066-79316085 | None:intergenic | 40.0% |
| GAGAATCTGGATCAAAACCT+TGG | - | chr1_1:79316156-79316175 | Msa0046890:CDS | 40.0% | |
| AGCAGTGAAACTATCAGAAG+AGG | - | chr1_1:79316185-79316204 | Msa0046890:CDS | 40.0% | |
| AACTATCAGAAGAGGACATG+CGG | - | chr1_1:79316193-79316212 | Msa0046890:CDS | 40.0% | |
| GTTCCTGAAGATGATATAGC+AGG | - | chr1_1:79316231-79316250 | Msa0046890:intron | 40.0% | |
| CTACCTGCTATATCATCTTC+AGG | + | chr1_1:79316237-79316256 | None:intergenic | 40.0% | |
| GCAGGTAGTAGATACTACAA+TGG | - | chr1_1:79316249-79316268 | Msa0046890:intron | 40.0% | |
| ! | GTTGAGACCGTTGAAACTTT+TGG | + | chr1_1:79316312-79316331 | None:intergenic | 40.0% |
| GTGATGATACCTGAAAGCCT+TGG | + | chr1_1:79313621-79313640 | None:intergenic | 45.0% | |
| GCTGATGTTTATGGACTCGA+TGG | - | chr1_1:79313855-79313874 | Msa0046890:intron | 45.0% | |
| GATGTTTATGGACTCGATGG+TGG | - | chr1_1:79313858-79313877 | Msa0046890:intron | 45.0% | |
| AGCTACAAGAATCGGAGGTT+AGG | - | chr1_1:79313922-79313941 | Msa0046890:intron | 45.0% | |
| AGGTTAGGTAGTTTCCCTAG+AGG | - | chr1_1:79313937-79313956 | Msa0046890:intron | 45.0% | |
| GATTTGAACCAGGACCTCTA+GGG | + | chr1_1:79313954-79313973 | None:intergenic | 45.0% | |
| TAGAGGTCCTGGTTCAAATC+CGG | - | chr1_1:79313954-79313973 | Msa0046890:intron | 45.0% | |
| CATTTGTCCGGATTTGAACC+AGG | + | chr1_1:79313964-79313983 | None:intergenic | 45.0% | |
| ACTTCCCAGAGAAAAGATCC+AGG | - | chr1_1:79314112-79314131 | Msa0046890:intron | 45.0% | |
| ACCTTTGATTCCCATACCAC+CGG | + | chr1_1:79314168-79314187 | None:intergenic | 45.0% | |
| CGATACAACTGTGCCTATTG+AGG | - | chr1_1:79314274-79314293 | Msa0046890:intron | 45.0% | |
| ACTCCCCTACCTCTATAAAC+TGG | - | chr1_1:79314436-79314455 | Msa0046890:intron | 45.0% | |
| ! | ACTTAAGAAACTGGTGGACG+AGG | - | chr1_1:79314558-79314577 | Msa0046890:CDS | 45.0% |
| ! | CTTAAGAAACTGGTGGACGA+GGG | - | chr1_1:79314559-79314578 | Msa0046890:CDS | 45.0% |
| AAGCCAGCCCTGATACAATA+AGG | - | chr1_1:79314608-79314627 | Msa0046890:CDS | 45.0% | |
| TCTCCTTATTGTATCAGGGC+TGG | + | chr1_1:79314614-79314633 | None:intergenic | 45.0% | |
| GAGTTCCTCTCTAAGTTCAC+AGG | - | chr1_1:79314731-79314750 | Msa0046890:intron | 45.0% | |
| TCTTGACCAAGTTCTCAGCT+TGG | + | chr1_1:79315342-79315361 | None:intergenic | 45.0% | |
| CTGCTCAGTTAGCATTAGCA+TGG | - | chr1_1:79315416-79315435 | Msa0046890:intron | 45.0% | |
| TTAGCATGGGTACTCCAACA+AGG | - | chr1_1:79315430-79315449 | Msa0046890:intron | 45.0% | |
| AAGGATGTTGTGCCTATTCC+TGG | - | chr1_1:79315454-79315473 | Msa0046890:intron | 45.0% | |
| GAGTGTCATCTGATGTACTC+AGG | - | chr1_1:79315986-79316005 | Msa0046890:intron | 45.0% | |
| GTTTCACTGCTAATGCACCA+AGG | + | chr1_1:79316176-79316195 | None:intergenic | 45.0% | |
| ACTATCAGAAGAGGACATGC+GGG | - | chr1_1:79316194-79316213 | Msa0046890:CDS | 45.0% | |
| CACGCCTCCAAAAGTTTCAA+CGG | - | chr1_1:79316302-79316321 | Msa0046890:intron | 45.0% | |
| ! | GAGACCGTTGAAACTTTTGG+AGG | + | chr1_1:79316309-79316328 | None:intergenic | 45.0% |
| TATCCTCCTCTGTGTGTCAG+CGG | + | chr1_1:79313420-79313439 | None:intergenic | 50.0% | |
| GAGGAGGATATCACAAAGCG+AGG | - | chr1_1:79313430-79313449 | Msa0046890:three_prime_UTR | 50.0% | |
| TGGGTTCCAAGTGTGACATG+AGG | + | chr1_1:79313601-79313620 | None:intergenic | 50.0% | |
| CATGTCACACTTGGAACCCA+AGG | - | chr1_1:79313601-79313620 | Msa0046890:three_prime_UTR | 50.0% | |
| ACTTGGAACCCAAGGCTTTC+AGG | - | chr1_1:79313609-79313628 | Msa0046890:exon | 50.0% | |
| GGATTTGAACCAGGACCTCT+AGG | + | chr1_1:79313955-79313974 | None:intergenic | 50.0% | |
| TCCCAGAGAAAAGATCCAGG+TGG | - | chr1_1:79314115-79314134 | Msa0046890:intron | 50.0% | |
| ! | GCCACCTGGATCTTTTCTCT+GGG | + | chr1_1:79314119-79314138 | None:intergenic | 50.0% |
| ! | AGCCACCTGGATCTTTTCTC+TGG | + | chr1_1:79314120-79314139 | None:intergenic | 50.0% |
| CAGCTTGAACGCACATACTC+CGG | + | chr1_1:79314194-79314213 | None:intergenic | 50.0% | |
| ACGAGATAGTTCCTCTCTGC+AGG | - | chr1_1:79314701-79314720 | Msa0046890:intron | 50.0% | |
| ACTCGAACTAACCTGCAGAG+AGG | + | chr1_1:79314715-79314734 | None:intergenic | 50.0% | |
| AAGTTCTCAGCTTGGAAGCG+GGG | + | chr1_1:79315334-79315353 | None:intergenic | 50.0% | |
| CAAGTTCTCAGCTTGGAAGC+GGG | + | chr1_1:79315335-79315354 | None:intergenic | 50.0% | |
| CCAAGTTCTCAGCTTGGAAG+CGG | + | chr1_1:79315336-79315355 | None:intergenic | 50.0% | |
| ATGGGTACTCCAACAAGGCA+AGG | - | chr1_1:79315435-79315454 | Msa0046890:intron | 50.0% | |
| GCACAACATCCTTGCCTTGT+TGG | + | chr1_1:79315447-79315466 | None:intergenic | 50.0% | |
| AGGCGTGTTAGCAAACTTCC+AGG | + | chr1_1:79316289-79316308 | None:intergenic | 50.0% | |
| ATCCTCCTCTGTGTGTCAGC+GGG | + | chr1_1:79313419-79313438 | None:intergenic | 55.0% | |
| GATACGATGCATGCGCATCG+CGG | + | chr1_1:79313466-79313485 | None:intergenic | 55.0% | |
| TTAGGGTGTATGGCCCTCAG+TGG | - | chr1_1:79313747-79313766 | Msa0046890:CDS | 55.0% | |
| GGTAGTTTCCCTAGAGGTCC+TGG | - | chr1_1:79313943-79313962 | Msa0046890:intron | 55.0% | |
| !! | GGTATATCCAGAAGTGCCGG+TGG | - | chr1_1:79314149-79314168 | Msa0046890:intron | 55.0% |
| !! | ATCCAGAAGTGCCGGTGGTA+TGG | - | chr1_1:79314154-79314173 | Msa0046890:intron | 55.0% |
| !! | TCCAGAAGTGCCGGTGGTAT+GGG | - | chr1_1:79314155-79314174 | Msa0046890:intron | 55.0% |
| GCCGGTGGTATGGGAATCAA+AGG | - | chr1_1:79314164-79314183 | Msa0046890:intron | 55.0% | |
| TCTCTGGACTCGCGACATTG+AGG | - | chr1_1:79314678-79314697 | Msa0046890:intron | 55.0% | |
| CGAAGATGTGCCGAGCTTCA+TGG | - | chr1_1:79314994-79315013 | Msa0046890:CDS | 55.0% | |
| CCGCTTCCAAGCTGAGAACT+TGG | - | chr1_1:79315333-79315352 | Msa0046890:CDS | 55.0% | |
| CTGTGTGTCAGCGGGGGTTA+TGG | + | chr1_1:79313411-79313430 | None:intergenic | 60.0% | |
| TAACCCCCGCTGACACACAG+AGG | - | chr1_1:79313411-79313430 | Msa0046890:three_prime_UTR | 60.0% | |
| TCCTCCTCTGTGTGTCAGCG+GGG | + | chr1_1:79313418-79313437 | None:intergenic | 60.0% | |
| TCCCATACCACCGGCACTTC+TGG | + | chr1_1:79314159-79314178 | None:intergenic | 60.0% | |
| CCTCCTCTGTGTGTCAGCGG+GGG | + | chr1_1:79313417-79313436 | None:intergenic | 65.0% | |
| GGGTGTATGGCCCTCAGTGG+AGG | - | chr1_1:79313750-79313769 | Msa0046890:CDS | 65.0% | |
| CCCCCGCTGACACACAGAGG+AGG | - | chr1_1:79313414-79313433 | Msa0046890:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 79313403 | 79316560 | 79313403 | ID=Msa0046890;Name=Msa0046890 |
| chr1_1 | mRNA | 79313403 | 79316560 | 79313403 | ID=Msa0046890-mRNA-1;Parent=Msa0046890;Name=Msa0046890-mRNA-1;_AED=0.37;_eAED=0.37;_QI=132|0.85|0.87|1|0.85|0.75|8|225|361 |
| chr1_1 | exon | 79313403 | 79313821 | 79313403 | ID=Msa0046890-mRNA-1:exon:27404;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79314488 | 79314641 | 79314488 | ID=Msa0046890-mRNA-1:exon:27403;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79314948 | 79315038 | 79314948 | ID=Msa0046890-mRNA-1:exon:27402;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79315241 | 79315413 | 79315241 | ID=Msa0046890-mRNA-1:exon:27401;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79315632 | 79315862 | 79315632 | ID=Msa0046890-mRNA-1:exon:27400;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79316061 | 79316231 | 79316061 | ID=Msa0046890-mRNA-1:exon:27399;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79316333 | 79316483 | 79316333 | ID=Msa0046890-mRNA-1:exon:27398;Parent=Msa0046890-mRNA-1 |
| chr1_1 | exon | 79316508 | 79316560 | 79316508 | ID=Msa0046890-mRNA-1:exon:27397;Parent=Msa0046890-mRNA-1 |
| chr1_1 | five_prime_UTR | 79316508 | 79316560 | 79316508 | ID=Msa0046890-mRNA-1:five_prime_utr;Parent=Msa0046890-mRNA-1 |
| chr1_1 | five_prime_UTR | 79316405 | 79316483 | 79316405 | ID=Msa0046890-mRNA-1:five_prime_utr;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79316333 | 79316404 | 79316333 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79316061 | 79316231 | 79316061 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79315632 | 79315862 | 79315632 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79315241 | 79315413 | 79315241 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79314948 | 79315038 | 79314948 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79314488 | 79314641 | 79314488 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | CDS | 79313628 | 79313821 | 79313628 | ID=Msa0046890-mRNA-1:cds;Parent=Msa0046890-mRNA-1 |
| chr1_1 | three_prime_UTR | 79313403 | 79313627 | 79313403 | ID=Msa0046890-mRNA-1:three_prime_utr;Parent=Msa0046890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
