Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038400 | XP_003626441.2 | 95.775 | 355 | 11 | 1 | 1 | 355 | 1 | 351 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038400 | sp|C6TBN2|AKR1_SOYBN | 77.778 | 351 | 69 | 5 | 8 | 355 | 2 | 346 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038400 | G7L1W1 | 95.775 | 355 | 11 | 1 | 1 | 355 | 1 | 351 | 0.0 | 700 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046890 | Msa1038400 | 0.822943 | 1.807579e-53 | -8.615850e-47 |
| Msa0481660 | Msa1038400 | 0.868979 | 4.363784e-66 | -8.615850e-47 |
| Msa1038400 | Msa1129360 | 0.833868 | 4.164450e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038400 | MtrunA17_Chr7g0274071 | 95.775 | 355 | 11 | 1 | 1 | 355 | 1 | 351 | 0.0 | 700 |
| Msa1038400 | MtrunA17_Chr7g0274061 | 82.336 | 351 | 50 | 4 | 8 | 350 | 4 | 350 | 0.0 | 580 |
| Msa1038400 | MtrunA17_Chr1g0204651 | 63.824 | 340 | 116 | 3 | 13 | 349 | 5 | 340 | 2.77e-165 | 465 |
| Msa1038400 | MtrunA17_Chr7g0274041 | 65.103 | 341 | 110 | 5 | 13 | 349 | 7 | 342 | 3.64e-163 | 459 |
| Msa1038400 | MtrunA17_Chr7g0221791 | 57.738 | 336 | 129 | 7 | 16 | 348 | 7 | 332 | 1.67e-135 | 389 |
| Msa1038400 | MtrunA17_Chr7g0222171 | 56.637 | 339 | 134 | 7 | 13 | 348 | 4 | 332 | 2.42e-133 | 384 |
| Msa1038400 | MtrunA17_Chr7g0222121 | 52.432 | 370 | 129 | 8 | 16 | 348 | 7 | 366 | 3.54e-128 | 372 |
| Msa1038400 | MtrunA17_Chr7g0274081 | 77.665 | 197 | 40 | 2 | 158 | 350 | 2 | 198 | 3.14e-109 | 317 |
| Msa1038400 | MtrunA17_Chr7g0274091 | 80.392 | 102 | 19 | 1 | 9 | 109 | 5 | 106 | 1.29e-51 | 167 |
| Msa1038400 | MtrunA17_Chr7g0221781 | 53.488 | 129 | 58 | 2 | 13 | 141 | 4 | 130 | 2.50e-40 | 139 |
| Msa1038400 | MtrunA17_Chr7g0221771 | 50.000 | 110 | 51 | 2 | 239 | 348 | 1 | 106 | 3.82e-34 | 122 |
| Msa1038400 | MtrunA17_Chr7g0222141 | 70.667 | 75 | 21 | 1 | 163 | 236 | 65 | 139 | 1.05e-33 | 122 |
| Msa1038400 | MtrunA17_Chr1g0169691 | 30.164 | 305 | 192 | 9 | 17 | 308 | 5 | 301 | 1.09e-29 | 116 |
| Msa1038400 | MtrunA17_Chr7g0222151 | 58.667 | 75 | 31 | 0 | 240 | 314 | 2 | 76 | 2.75e-27 | 102 |
| Msa1038400 | MtrunA17_Chr3g0095421 | 29.483 | 329 | 192 | 12 | 16 | 320 | 38 | 350 | 2.32e-26 | 107 |
| Msa1038400 | MtrunA17_Chr3g0127491 | 28.615 | 325 | 192 | 14 | 23 | 324 | 44 | 351 | 1.44e-25 | 105 |
| Msa1038400 | MtrunA17_Chr8g0380261 | 26.316 | 342 | 202 | 12 | 22 | 319 | 48 | 383 | 1.88e-24 | 103 |
| Msa1038400 | MtrunA17_Chr1g0167421 | 28.144 | 334 | 185 | 13 | 18 | 306 | 66 | 389 | 5.07e-23 | 99.4 |
| Msa1038400 | MtrunA17_Chr4g0049341 | 28.231 | 294 | 186 | 9 | 18 | 305 | 6 | 280 | 2.08e-22 | 96.3 |
| Msa1038400 | MtrunA17_Chr7g0221801 | 50.725 | 69 | 33 | 1 | 13 | 81 | 4 | 71 | 1.34e-15 | 71.2 |
| Msa1038400 | MtrunA17_Chr4g0018921 | 26.333 | 300 | 166 | 10 | 37 | 318 | 20 | 282 | 1.24e-13 | 70.9 |
| Msa1038400 | MtrunA17_Chr3g0121001 | 26.190 | 294 | 164 | 10 | 54 | 329 | 44 | 302 | 2.52e-13 | 70.1 |
| Msa1038400 | MtrunA17_Chr4g0036051 | 27.300 | 337 | 163 | 14 | 16 | 320 | 3 | 289 | 4.85e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038400 | AT1G60710.1 | 59.882 | 339 | 126 | 5 | 13 | 348 | 7 | 338 | 1.26e-141 | 405 |
| Msa1038400 | AT1G60690.1 | 58.997 | 339 | 129 | 5 | 13 | 348 | 7 | 338 | 8.35e-141 | 403 |
| Msa1038400 | AT1G60680.1 | 56.196 | 347 | 141 | 6 | 13 | 355 | 7 | 346 | 1.95e-137 | 395 |
| Msa1038400 | AT1G60750.1 | 56.973 | 337 | 123 | 5 | 13 | 348 | 8 | 323 | 4.60e-136 | 390 |
| Msa1038400 | AT1G60730.1 | 56.932 | 339 | 136 | 5 | 13 | 348 | 7 | 338 | 2.32e-135 | 389 |
| Msa1038400 | AT1G60730.3 | 54.366 | 355 | 140 | 5 | 13 | 348 | 7 | 358 | 8.31e-133 | 384 |
| Msa1038400 | AT1G10810.1 | 54.783 | 345 | 146 | 5 | 13 | 354 | 7 | 344 | 1.52e-127 | 369 |
| Msa1038400 | AT1G10810.3 | 56.631 | 279 | 112 | 4 | 79 | 354 | 20 | 292 | 2.96e-107 | 316 |
| Msa1038400 | AT1G60680.2 | 62.844 | 218 | 75 | 3 | 13 | 229 | 7 | 219 | 2.68e-95 | 284 |
| Msa1038400 | AT1G10810.2 | 58.009 | 231 | 86 | 3 | 13 | 243 | 7 | 226 | 3.72e-88 | 266 |
| Msa1038400 | AT1G60730.2 | 50.968 | 155 | 75 | 1 | 13 | 167 | 7 | 160 | 6.67e-47 | 157 |
| Msa1038400 | AT1G04690.1 | 29.904 | 311 | 193 | 9 | 13 | 308 | 1 | 301 | 8.23e-31 | 119 |
| Msa1038400 | AT5G53580.1 | 28.788 | 330 | 187 | 13 | 23 | 325 | 45 | 353 | 6.53e-28 | 112 |
| Msa1038400 | AT1G06690.1 | 28.829 | 333 | 197 | 11 | 16 | 324 | 49 | 365 | 7.41e-28 | 112 |
| Msa1038400 | AT4G33670.1 | 27.157 | 313 | 199 | 10 | 18 | 320 | 9 | 302 | 1.26e-24 | 102 |
| Msa1038400 | AT1G04420.1 | 27.576 | 330 | 192 | 13 | 18 | 306 | 61 | 384 | 4.58e-19 | 88.2 |
| Msa1038400 | AT2G21260.1 | 26.190 | 336 | 168 | 14 | 16 | 320 | 3 | 289 | 3.99e-13 | 69.7 |
| Msa1038400 | AT2G21250.1 | 26.113 | 337 | 167 | 14 | 16 | 320 | 3 | 289 | 5.07e-12 | 66.2 |
| Msa1038400 | AT2G37760.4 | 27.106 | 273 | 140 | 11 | 50 | 300 | 29 | 264 | 1.34e-11 | 65.1 |
| Msa1038400 | AT2G37760.3 | 27.106 | 273 | 140 | 11 | 50 | 300 | 29 | 264 | 1.34e-11 | 65.1 |
| Msa1038400 | AT2G21260.2 | 26.724 | 232 | 119 | 8 | 114 | 320 | 16 | 221 | 1.38e-11 | 64.3 |
| Msa1038400 | AT2G37760.5 | 27.106 | 273 | 140 | 11 | 50 | 300 | 29 | 264 | 1.41e-11 | 65.1 |
| Msa1038400 | AT2G27680.1 | 23.675 | 283 | 187 | 8 | 19 | 283 | 52 | 323 | 1.49e-11 | 65.5 |
| Msa1038400 | AT2G37760.2 | 27.106 | 273 | 140 | 11 | 50 | 300 | 29 | 264 | 1.92e-11 | 64.7 |
| Msa1038400 | AT2G37760.1 | 27.106 | 273 | 140 | 11 | 50 | 300 | 29 | 264 | 1.92e-11 | 64.7 |
Find 103 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATCCCTTATTATTTA+TGG | 0.046291 | 7_1:-75217014 | None:intergenic |
| TTTGACACTGCTGATGTTTA+TGG | 0.130046 | 7_1:+75214391 | Msa1038400:CDS |
| CGATGGTGGGAATGAAATTT+TGG | 0.194348 | 7_1:+75214417 | Msa1038400:CDS |
| ATCCAGGTGGCTACAAAATT+TGG | 0.216306 | 7_1:+75214676 | Msa1038400:CDS |
| GCCCATACCACCGGCACTTC+TGG | 0.222164 | 7_1:-75214704 | None:intergenic |
| GTTGAGACCGTTGAAACTTT+TGG | 0.258801 | 7_1:-75216839 | None:intergenic |
| TGTGCTCTCCTTATTGTATC+AGG | 0.290458 | 7_1:-75215146 | None:intergenic |
| GATCCTCTTCCTGAAGAAAT+TGG | 0.293230 | 7_1:+75214325 | Msa1038400:CDS |
| TAGGTTTCAAAATTCGGTTT+AGG | 0.304608 | 7_1:+75214274 | Msa1038400:intron |
| AGGTTTCAAAATTCGGTTTA+GGG | 0.317344 | 7_1:+75214275 | Msa1038400:intron |
| AACAACTAAGATTGAGAATC+TGG | 0.331104 | 7_1:+75216673 | Msa1038400:CDS |
| TGTTTGTGTTGCGGTCATTT+TGG | 0.342332 | 7_1:-75214099 | None:intergenic |
| ACGGAAATGCCAATTTCTTC+AGG | 0.353338 | 7_1:-75214334 | None:intergenic |
| CGAAGATGTGCCGAGCTTCA+TGG | 0.363687 | 7_1:+75215524 | Msa1038400:CDS |
| ACTGAATGCATGCTTAATTA+CGG | 0.364560 | 7_1:-75214353 | None:intergenic |
| GAGGGAAAAGTTAAGTATAT+TGG | 0.364781 | 7_1:+75215107 | Msa1038400:CDS |
| CCTTTACCAAGTGGACTATA+TGG | 0.375897 | 7_1:-75215477 | None:intergenic |
| TTTCATTCCATAAATAATAA+GGG | 0.382154 | 7_1:+75217007 | Msa1038400:three_prime_UTR |
| TGATACAGAGAGCTTGGTAT+TGG | 0.386936 | 7_1:+75215447 | Msa1038400:intron |
| AAAATTCGGTTTAGGGTGTA+TGG | 0.387624 | 7_1:+75214282 | Msa1038400:CDS |
| ATCCTCCTCTGTGTGTCAGC+GGG | 0.392134 | 7_1:-75213980 | None:intergenic |
| GAATGCACTCATCATGAATA+AGG | 0.392763 | 7_1:+75216888 | Msa1038400:three_prime_UTR |
| AAGGATGTTGTGCCTATTCC+TGG | 0.394764 | 7_1:+75215984 | Msa1038400:CDS |
| ATCCAGAAGTGCCGGTGGTA+TGG | 0.399554 | 7_1:+75214702 | Msa1038400:CDS |
| GGTAGGTGAACTTAAGAAAC+TGG | 0.404929 | 7_1:+75215079 | Msa1038400:intron |
| AAGCCAGCCCTGATACAATA+AGG | 0.414769 | 7_1:+75215138 | Msa1038400:CDS |
| CCGCTTCCAAGCTGAGAACT+TGG | 0.415734 | 7_1:+75215863 | Msa1038400:CDS |
| CTACCTGCTATATCATCTTC+AGG | 0.426229 | 7_1:-75216764 | None:intergenic |
| GCACAACATCCTTGCCTTGT+TGG | 0.434088 | 7_1:-75215974 | None:intergenic |
| TCTATTTGTAAAGCTGTGAT+AGG | 0.434957 | 7_1:-75215179 | None:intergenic |
| TACAAATAGAGTGGTCTCTC+TGG | 0.437707 | 7_1:+75215192 | Msa1038400:CDS |
| GATTTGAATCAAATTCTCAT+AGG | 0.443062 | 7_1:+75217029 | Msa1038400:three_prime_UTR |
| GAAGTAAAATCTCTTTCAGT+TGG | 0.444389 | 7_1:+75216864 | Msa1038400:exon |
| TCCTTAACTGTATCCTCAAT+AGG | 0.450280 | 7_1:-75214835 | None:intergenic |
| ACTTGGAACCCAAGGCTTTG+AGG | 0.456286 | 7_1:+75214154 | Msa1038400:CDS |
| AGGTGTGTTAGCAAACTTCC+AGG | 0.458381 | 7_1:-75216816 | None:intergenic |
| TCTCCTTATTGTATCAGGGC+TGG | 0.459103 | 7_1:-75215141 | None:intergenic |
| GCCTATTGAGGATACAGTTA+AGG | 0.476827 | 7_1:+75214834 | Msa1038400:CDS |
| CCATATAGTCCACTTGGTAA+AGG | 0.481916 | 7_1:+75215477 | Msa1038400:CDS |
| ATGCCAATTTCTTCAGGAAG+AGG | 0.491719 | 7_1:-75214328 | None:intergenic |
| TCCAGAAGTGCCGGTGGTAT+GGG | 0.494504 | 7_1:+75214703 | Msa1038400:CDS |
| ATCTTCGAGAACTCCTTTGC+CGG | 0.497825 | 7_1:-75215508 | None:intergenic |
| TTAGATGAATGTGAATGAAA+TGG | 0.500630 | 7_1:+75217060 | Msa1038400:three_prime_UTR |
| CAAGTTCTCAGCTTGGAAGC+GGG | 0.500791 | 7_1:-75215862 | None:intergenic |
| CTAATTCCTCATGTCACACT+TGG | 0.500882 | 7_1:+75214137 | Msa1038400:CDS |
| TGATGATACCTCAAAGCCTT+GGG | 0.505021 | 7_1:-75214162 | None:intergenic |
| ATTAAGCATGCATTCAGTAA+AGG | 0.507501 | 7_1:+75214358 | Msa1038400:CDS |
| AGAACAAGGTTATATATGAT+AGG | 0.508380 | 7_1:+75215889 | Msa1038400:CDS |
| ACTTAAGAAACTGGTGGATG+AGG | 0.511244 | 7_1:+75215088 | Msa1038400:CDS |
| ACGAGATAGTTCCTCTCTGC+AGG | 0.515403 | 7_1:+75215231 | Msa1038400:CDS |
| ACCTTTGATGCCCATACCAC+CGG | 0.515860 | 7_1:-75214713 | None:intergenic |
| CGATACAACTGTGCCTATTG+AGG | 0.516697 | 7_1:+75214822 | Msa1038400:CDS |
| CCAAGTTCTCAGCTTGGAAG+CGG | 0.517525 | 7_1:-75215863 | None:intergenic |
| TCTTGACCAAGTTCTCAGCT+TGG | 0.528939 | 7_1:-75215869 | None:intergenic |
| GTGCTCTCCTTATTGTATCA+GGG | 0.530977 | 7_1:-75215145 | None:intergenic |
| GTGATGATACCTCAAAGCCT+TGG | 0.533843 | 7_1:-75214163 | None:intergenic |
| CTTAAGAAACTGGTGGATGA+GGG | 0.536361 | 7_1:+75215089 | Msa1038400:CDS |
| GCCGGTGGTATGGGCATCAA+AGG | 0.537453 | 7_1:+75214712 | Msa1038400:CDS |
| TCATTCACATTCATCTAACA+TGG | 0.540927 | 7_1:-75217055 | None:intergenic |
| ATGGAATGGATAGTTTATCC+TGG | 0.545904 | 7_1:+75216798 | Msa1038400:CDS |
| CTGCTCAGTTAGCATTAGCA+TGG | 0.546251 | 7_1:+75215946 | Msa1038400:CDS |
| GGGTGTATGGCCCTCAGTGG+AGG | 0.554437 | 7_1:+75214295 | Msa1038400:CDS |
| TTGTGTTTGTGTTTGTGTTG+CGG | 0.560555 | 7_1:-75214108 | None:intergenic |
| CACACCTCCAAAAGTTTCAA+CGG | 0.566882 | 7_1:+75216832 | Msa1038400:CDS |
| CATGTCACACTTGGAACCCA+AGG | 0.578508 | 7_1:+75214146 | Msa1038400:CDS |
| GTTCCTGAAGATGATATAGC+AGG | 0.578538 | 7_1:+75216761 | Msa1038400:CDS |
| TATGGGCATCAAAGGTTCAC+CGG | 0.579317 | 7_1:+75214720 | Msa1038400:CDS |
| TCCTCCTCTGTGTGTCAGCG+GGG | 0.579998 | 7_1:-75213979 | None:intergenic |
| GAGAATCTGGATCAAAACCT+TGG | 0.589578 | 7_1:+75216686 | Msa1038400:CDS |
| CAGCTTGAACGCACATACTC+CGG | 0.590970 | 7_1:-75214739 | None:intergenic |
| TTTGGTATATCCAGAAGTGC+CGG | 0.592216 | 7_1:+75214694 | Msa1038400:CDS |
| TGAGAACTTGGTCAAGAACA+AGG | 0.594858 | 7_1:+75215875 | Msa1038400:CDS |
| AGCAGTGAAACTATCAGAAG+AGG | 0.596544 | 7_1:+75216715 | Msa1038400:CDS |
| ACTTCCCAGAGAAAAGATCC+AGG | 0.597330 | 7_1:+75214660 | Msa1038400:CDS |
| ATCATTATAACCTCCACTGA+GGG | 0.598759 | 7_1:-75214305 | None:intergenic |
| TAGTAGATACTACAATGGAA+TGG | 0.602882 | 7_1:+75216784 | Msa1038400:CDS |
| TATCCTCCTCTGTGTGTCAG+CGG | 0.607033 | 7_1:-75213981 | None:intergenic |
| CCTCCTCTGTGTGTCAGCGG+GGG | 0.607663 | 7_1:-75213978 | None:intergenic |
| ATGGGTACTCCAACAAGGCA+AGG | 0.611881 | 7_1:+75215965 | Msa1038400:CDS |
| GATGTTTATGGACTCGATGG+TGG | 0.612735 | 7_1:+75214403 | Msa1038400:CDS |
| ATTGTACCATATAGTCCACT+TGG | 0.612810 | 7_1:+75215471 | Msa1038400:CDS |
| AAGTTCTCAGCTTGGAAGCG+GGG | 0.613856 | 7_1:-75215861 | None:intergenic |
| AAATGCTATACCATGAAGCT+CGG | 0.620782 | 7_1:-75215534 | None:intergenic |
| ATGTTTATGGACTCGATGGT+GGG | 0.621527 | 7_1:+75214404 | Msa1038400:CDS |
| GAAAGTCTTAGCAAGAAGCA+TGG | 0.623738 | 7_1:+75215915 | Msa1038400:CDS |
| TCTCTGGACTCGCGACATTG+AGG | 0.626799 | 7_1:+75215208 | Msa1038400:CDS |
| GCTGATGTTTATGGACTCGA+TGG | 0.627574 | 7_1:+75214400 | Msa1038400:CDS |
| TGCTCAGTTAGCATTAGCAT+GGG | 0.633628 | 7_1:+75215947 | Msa1038400:CDS |
| AGGTGAACTTAAGAAACTGG+TGG | 0.648118 | 7_1:+75215082 | Msa1038400:CDS |
| TCACAGCTTTACAAATAGAG+TGG | 0.653310 | 7_1:+75215183 | Msa1038400:CDS |
| TTAGGGTGTATGGCCCTCAG+TGG | 0.653469 | 7_1:+75214292 | Msa1038400:CDS |
| AACTATCAGAAGAGGACACG+CGG | 0.654133 | 7_1:+75216723 | Msa1038400:CDS |
| GAGGAGGATATCACAAAGCG+AGG | 0.654372 | 7_1:+75213994 | Msa1038400:five_prime_UTR |
| ATATATACGCATGCGCATCG+CGG | 0.669506 | 7_1:-75214027 | None:intergenic |
| GTTTCACTGCTAATGCACCA+AGG | 0.681712 | 7_1:-75216703 | None:intergenic |
| TGGGTTCCAAGTGTGACATG+AGG | 0.682273 | 7_1:-75214143 | None:intergenic |
| GCAGGTAGTAGATACTACAA+TGG | 0.684368 | 7_1:+75216779 | Msa1038400:CDS |
| TTAGCATGGGTACTCCAACA+AGG | 0.686154 | 7_1:+75215960 | Msa1038400:CDS |
| ACTATCAGAAGAGGACACGC+GGG | 0.693352 | 7_1:+75216724 | Msa1038400:CDS |
| GGTATATCCAGAAGTGCCGG+TGG | 0.696646 | 7_1:+75214697 | Msa1038400:CDS |
| GATCATTATAACCTCCACTG+AGG | 0.735023 | 7_1:-75214306 | None:intergenic |
| ACTCGAACTAACCTGCAGAG+AGG | 0.749098 | 7_1:-75215242 | None:intergenic |
| TCCCAGAGAAAAGATCCAGG+TGG | 0.757635 | 7_1:+75214663 | Msa1038400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTCTTGAAAATATTA+TGG | + | chr7_1:75216632-75216651 | Msa1038400:intron | 10.0% |
| !! | CCTAAAATAAAAACAATAAT+AGG | - | chr7_1:75214258-75214277 | None:intergenic | 15.0% |
| !!! | CCTATTATTGTTTTTATTTT+AGG | + | chr7_1:75214255-75214274 | Msa1038400:intron | 15.0% |
| !!! | TTATTTTAGGTTTCAAAATT+CGG | + | chr7_1:75214268-75214287 | Msa1038400:intron | 15.0% |
| !!! | ATATCTTTTATGTTCTAAAT+TGG | + | chr7_1:75214551-75214570 | Msa1038400:intron | 15.0% |
| !! | AAGAAAAAAAAAACTCAAAT+TGG | - | chr7_1:75214599-75214618 | None:intergenic | 15.0% |
| !!! | ATAAACTTTTTAAAAAGGAA+AGG | - | chr7_1:75215801-75215820 | None:intergenic | 15.0% |
| !!! | ACAACATAAACTTTTTAAAA+AGG | - | chr7_1:75215806-75215825 | None:intergenic | 15.0% |
| !! | ATTATTGTAAAAATCTTTGA+TGG | + | chr7_1:75216043-75216062 | Msa1038400:intron | 15.0% |
| !! | AAAAAGCTGAAAATAAAATT+AGG | - | chr7_1:75216614-75216633 | None:intergenic | 15.0% |
| !!! | TTTTCATTCCATAAATAATA+AGG | + | chr7_1:75217006-75217025 | Msa1038400:three_prime_UTR | 15.0% |
| !! | TTTCATTCCATAAATAATAA+GGG | + | chr7_1:75217007-75217026 | Msa1038400:three_prime_UTR | 15.0% |
| !! | TATAGAGAGAAGAATATAAA+TGG | - | chr7_1:75214216-75214235 | None:intergenic | 20.0% |
| !! | TTAATATTTACTCATTTGTC+CGG | - | chr7_1:75214523-75214542 | None:intergenic | 20.0% |
| !!! | TTTATGTTCTAAATTGGATA+CGG | + | chr7_1:75214557-75214576 | Msa1038400:intron | 20.0% |
| !!! | ATTCAAGTTTGAAGATTATT+TGG | + | chr7_1:75215013-75215032 | Msa1038400:intron | 20.0% |
| !! | TAACAAGTTTATTGTGTTAT+AGG | + | chr7_1:75215058-75215077 | Msa1038400:intron | 20.0% |
| !! | CTTGATCATGAATTAAATAT+TGG | + | chr7_1:75215643-75215662 | Msa1038400:intron | 20.0% |
| !!! | TCTAACAAAAGTGTATTTTT+TGG | - | chr7_1:75216244-75216263 | None:intergenic | 20.0% |
| !! | TAACAATTTATCACATAGTT+TGG | + | chr7_1:75216316-75216335 | Msa1038400:intron | 20.0% |
| !! | TAAAAATTTAGAAGAACCTT+TGG | - | chr7_1:75216549-75216568 | None:intergenic | 20.0% |
| !! | TTCAAATCCCTTATTATTTA+TGG | - | chr7_1:75217017-75217036 | None:intergenic | 20.0% |
| ! | CAACACAATCAAATAATGAA+AGG | - | chr7_1:75214624-75214643 | None:intergenic | 25.0% |
| !!! | ATTATTTGATTGTGTTGACT+AGG | + | chr7_1:75214627-75214646 | Msa1038400:intron | 25.0% |
| ! | CATGTTAATTCTTACTGATA+TGG | + | chr7_1:75214904-75214923 | Msa1038400:intron | 25.0% |
| ! | AAGTTTATTGTGTTATAGGT+AGG | + | chr7_1:75215062-75215081 | Msa1038400:intron | 25.0% |
| !! | TTGAACAACTTTCATTGATT+AGG | + | chr7_1:75215328-75215347 | Msa1038400:intron | 25.0% |
| ! | GATCAATGCTATTACATAAT+TGG | - | chr7_1:75215619-75215638 | None:intergenic | 25.0% |
| ! | TTAAACTTGAGTAATGTTAC+AGG | + | chr7_1:75215710-75215729 | Msa1038400:intron | 25.0% |
| ! | TAAACTTGAGTAATGTTACA+GGG | + | chr7_1:75215711-75215730 | Msa1038400:intron | 25.0% |
| ! | CATGTGAGAAAAAACAAATA+AGG | - | chr7_1:75215745-75215764 | None:intergenic | 25.0% |
| ! | AGAACAAGGTTATATATGAT+AGG | + | chr7_1:75215889-75215908 | Msa1038400:CDS | 25.0% |
| ! | TGTTCAGATTCATAAATAAG+AGG | - | chr7_1:75216114-75216133 | None:intergenic | 25.0% |
| ! | TTCTTAATTGTTAGGATACA+TGG | - | chr7_1:75216150-75216169 | None:intergenic | 25.0% |
| ! | ATGTAACGTTATAAATCGTA+CGG | + | chr7_1:75216418-75216437 | Msa1038400:intron | 25.0% |
| ! | CTCTTAATATATGAAATGCA+AGG | - | chr7_1:75216499-75216518 | None:intergenic | 25.0% |
| ! | AAGCTGAAAATAAAATTAGG+TGG | - | chr7_1:75216611-75216630 | None:intergenic | 25.0% |
| ! | GATTTGAATCAAATTCTCAT+AGG | + | chr7_1:75217029-75217048 | Msa1038400:three_prime_UTR | 25.0% |
| ! | TTAGATGAATGTGAATGAAA+TGG | + | chr7_1:75217060-75217079 | Msa1038400:three_prime_UTR | 25.0% |
| TCACTGCAAAATGCAAAAAT+TGG | + | chr7_1:75214052-75214071 | Msa1038400:five_prime_UTR | 30.0% | |
| TAGGTTTCAAAATTCGGTTT+AGG | + | chr7_1:75214274-75214293 | Msa1038400:intron | 30.0% | |
| AGGTTTCAAAATTCGGTTTA+GGG | + | chr7_1:75214275-75214294 | Msa1038400:intron | 30.0% | |
| ACTGAATGCATGCTTAATTA+CGG | - | chr7_1:75214356-75214375 | None:intergenic | 30.0% | |
| ATTAAGCATGCATTCAGTAA+AGG | + | chr7_1:75214358-75214377 | Msa1038400:CDS | 30.0% | |
| !!! | GAATGAAATTTTGGTTGGAA+AGG | + | chr7_1:75214426-75214445 | Msa1038400:CDS | 30.0% |
| CTAATCATAGCTACAAGAAT+CGG | + | chr7_1:75214459-75214478 | Msa1038400:intron | 30.0% | |
| TGAGAGTCCCAAATTATAAA+TGG | + | chr7_1:75214940-75214959 | Msa1038400:intron | 30.0% | |
| GAGAGTCCCAAATTATAAAT+GGG | + | chr7_1:75214941-75214960 | Msa1038400:intron | 30.0% | |
| GAGTCTCCCATTTATAATTT+GGG | - | chr7_1:75214950-75214969 | None:intergenic | 30.0% | |
| AAAACCAGTTTATAGAGGTA+GGG | - | chr7_1:75214973-75214992 | None:intergenic | 30.0% | |
| !!! | CTCTATAAACTGGTTTTGTA+GGG | + | chr7_1:75214976-75214995 | Msa1038400:intron | 30.0% |
| GAGGGAAAAGTTAAGTATAT+TGG | + | chr7_1:75215107-75215126 | Msa1038400:CDS | 30.0% | |
| TCTATTTGTAAAGCTGTGAT+AGG | - | chr7_1:75215182-75215201 | None:intergenic | 30.0% | |
| ATGTCTCAACAGTAATTCTA+TGG | - | chr7_1:75215595-75215614 | None:intergenic | 30.0% | |
| AAACTTGAGTAATGTTACAG+GGG | + | chr7_1:75215712-75215731 | Msa1038400:intron | 30.0% | |
| ! | CTCATATTTCTGATACTGTT+AGG | - | chr7_1:75216087-75216106 | None:intergenic | 30.0% |
| ATGGTGCATTCTTAATTGTT+AGG | - | chr7_1:75216158-75216177 | None:intergenic | 30.0% | |
| ! | ACAACGATAGAAGAAGTATA+TGG | - | chr7_1:75216177-75216196 | None:intergenic | 30.0% |
| TATCACATAGTTTGGCTAAT+TGG | + | chr7_1:75216324-75216343 | Msa1038400:intron | 30.0% | |
| ATTACAAGTTTACCCCTTAT+TGG | + | chr7_1:75216446-75216465 | Msa1038400:intron | 30.0% | |
| TGACTCATATTCACCAATAA+GGG | - | chr7_1:75216462-75216481 | None:intergenic | 30.0% | |
| ATGACTCATATTCACCAATA+AGG | - | chr7_1:75216463-75216482 | None:intergenic | 30.0% | |
| AACAACTAAGATTGAGAATC+TGG | + | chr7_1:75216673-75216692 | Msa1038400:CDS | 30.0% | |
| TAGTAGATACTACAATGGAA+TGG | + | chr7_1:75216784-75216803 | Msa1038400:CDS | 30.0% | |
| ! | ACTGAAAGAGATTTTACTTC+AGG | - | chr7_1:75216864-75216883 | None:intergenic | 30.0% |
| GAAGTAAAATCTCTTTCAGT+TGG | + | chr7_1:75216864-75216883 | Msa1038400:exon | 30.0% | |
| TCATTCACATTCATCTAACA+TGG | - | chr7_1:75217058-75217077 | None:intergenic | 30.0% | |
| TTGTGTTTGTGTTTGTGTTG+CGG | - | chr7_1:75214111-75214130 | None:intergenic | 35.0% | |
| ! | AAAATTCGGTTTAGGGTGTA+TGG | + | chr7_1:75214282-75214301 | Msa1038400:CDS | 35.0% |
| ATCATTATAACCTCCACTGA+GGG | - | chr7_1:75214308-75214327 | None:intergenic | 35.0% | |
| TTTGACACTGCTGATGTTTA+TGG | + | chr7_1:75214391-75214410 | Msa1038400:CDS | 35.0% | |
| TCCTTAACTGTATCCTCAAT+AGG | - | chr7_1:75214838-75214857 | None:intergenic | 35.0% | |
| GGAGTCTCCCATTTATAATT+TGG | - | chr7_1:75214951-75214970 | None:intergenic | 35.0% | |
| AAACCAGTTTATAGAGGTAG+GGG | - | chr7_1:75214972-75214991 | None:intergenic | 35.0% | |
| CAAAACCAGTTTATAGAGGT+AGG | - | chr7_1:75214974-75214993 | None:intergenic | 35.0% | |
| CCTACAAAACCAGTTTATAG+AGG | - | chr7_1:75214978-75214997 | None:intergenic | 35.0% | |
| !!! | CCTCTATAAACTGGTTTTGT+AGG | + | chr7_1:75214975-75214994 | Msa1038400:intron | 35.0% |
| TCACAGCTTTACAAATAGAG+TGG | + | chr7_1:75215183-75215202 | Msa1038400:CDS | 35.0% | |
| ! | TCATTGATTAGGAGTTACTC+AGG | + | chr7_1:75215339-75215358 | Msa1038400:intron | 35.0% |
| ! | CATTGATTAGGAGTTACTCA+GGG | + | chr7_1:75215340-75215359 | Msa1038400:intron | 35.0% |
| GTTACTCAGGGTTAAAGAAA+TGG | + | chr7_1:75215352-75215371 | Msa1038400:intron | 35.0% | |
| ! | TTTTGTTGATACAGAGAGCT+TGG | + | chr7_1:75215441-75215460 | Msa1038400:intron | 35.0% |
| ATTGTACCATATAGTCCACT+TGG | + | chr7_1:75215471-75215490 | Msa1038400:CDS | 35.0% | |
| GCAAAAAAACCTTTACCAAG+TGG | - | chr7_1:75215489-75215508 | None:intergenic | 35.0% | |
| !!! | CTTGGTAAAGGTTTTTTTGC+CGG | + | chr7_1:75215489-75215508 | Msa1038400:CDS | 35.0% |
| AAATGCTATACCATGAAGCT+CGG | - | chr7_1:75215537-75215556 | None:intergenic | 35.0% | |
| ! | TTTTGTAACTCACCAGGAAT+AGG | - | chr7_1:75215999-75216018 | None:intergenic | 35.0% |
| ! | TGCATATTTTGTAACTCACC+AGG | - | chr7_1:75216005-75216024 | None:intergenic | 35.0% |
| TACAACAATCACTCTGTTGT+CGG | - | chr7_1:75216360-75216379 | None:intergenic | 35.0% | |
| GACTCATATTCACCAATAAG+GGG | - | chr7_1:75216461-75216480 | None:intergenic | 35.0% | |
| ! | TATGGACTTCTTTTGTTCTC+AGG | + | chr7_1:75216650-75216669 | Msa1038400:intron | 35.0% |
| ATGGAATGGATAGTTTATCC+TGG | + | chr7_1:75216798-75216817 | Msa1038400:CDS | 35.0% | |
| GAATGCACTCATCATGAATA+AGG | + | chr7_1:75216888-75216907 | Msa1038400:three_prime_UTR | 35.0% | |
| ! | TGTTTGTGTTGCGGTCATTT+TGG | - | chr7_1:75214102-75214121 | None:intergenic | 40.0% |
| CTAATTCCTCATGTCACACT+TGG | + | chr7_1:75214137-75214156 | Msa1038400:CDS | 40.0% | |
| TGATGATACCTCAAAGCCTT+GGG | - | chr7_1:75214165-75214184 | None:intergenic | 40.0% | |
| GATCATTATAACCTCCACTG+AGG | - | chr7_1:75214309-75214328 | None:intergenic | 40.0% | |
| GATCCTCTTCCTGAAGAAAT+TGG | + | chr7_1:75214325-75214344 | Msa1038400:CDS | 40.0% | |
| ATGCCAATTTCTTCAGGAAG+AGG | - | chr7_1:75214331-75214350 | None:intergenic | 40.0% | |
| ACGGAAATGCCAATTTCTTC+AGG | - | chr7_1:75214337-75214356 | None:intergenic | 40.0% | |
| ATGTTTATGGACTCGATGGT+GGG | + | chr7_1:75214404-75214423 | Msa1038400:CDS | 40.0% | |
| !!! | CGATGGTGGGAATGAAATTT+TGG | + | chr7_1:75214417-75214436 | Msa1038400:CDS | 40.0% |
| !! | GGTGGGAATGAAATTTTGGT+TGG | + | chr7_1:75214421-75214440 | Msa1038400:CDS | 40.0% |
| ATCATAGCTACAAGAATCGG+AGG | + | chr7_1:75214462-75214481 | Msa1038400:intron | 40.0% | |
| TTTGAACCAGGACCTCTATA+GGG | - | chr7_1:75214499-75214518 | None:intergenic | 40.0% | |
| ATTTGAACCAGGACCTCTAT+AGG | - | chr7_1:75214500-75214519 | None:intergenic | 40.0% | |
| ATCCAGGTGGCTACAAAATT+TGG | + | chr7_1:75214676-75214695 | Msa1038400:CDS | 40.0% | |
| ! | TACCAAATTTTGTAGCCACC+TGG | - | chr7_1:75214681-75214700 | None:intergenic | 40.0% |
| ! | TTTGGTATATCCAGAAGTGC+CGG | + | chr7_1:75214694-75214713 | Msa1038400:CDS | 40.0% |
| GCCTATTGAGGATACAGTTA+AGG | + | chr7_1:75214834-75214853 | Msa1038400:CDS | 40.0% | |
| GGTAGGTGAACTTAAGAAAC+TGG | + | chr7_1:75215079-75215098 | Msa1038400:intron | 40.0% | |
| AGGTGAACTTAAGAAACTGG+TGG | + | chr7_1:75215082-75215101 | Msa1038400:CDS | 40.0% | |
| ! | ACTTAAGAAACTGGTGGATG+AGG | + | chr7_1:75215088-75215107 | Msa1038400:CDS | 40.0% |
| ! | CTTAAGAAACTGGTGGATGA+GGG | + | chr7_1:75215089-75215108 | Msa1038400:CDS | 40.0% |
| GTGCTCTCCTTATTGTATCA+GGG | - | chr7_1:75215148-75215167 | None:intergenic | 40.0% | |
| TGTGCTCTCCTTATTGTATC+AGG | - | chr7_1:75215149-75215168 | None:intergenic | 40.0% | |
| TACAAATAGAGTGGTCTCTC+TGG | + | chr7_1:75215192-75215211 | Msa1038400:CDS | 40.0% | |
| CTTATCCTGTGAACTTAGAG+AGG | - | chr7_1:75215269-75215288 | None:intergenic | 40.0% | |
| GAAATGGAACTGATTGCTCT+TGG | + | chr7_1:75215368-75215387 | Msa1038400:intron | 40.0% | |
| TGATACAGAGAGCTTGGTAT+TGG | + | chr7_1:75215447-75215466 | Msa1038400:intron | 40.0% | |
| !! | CCTTTACCAAGTGGACTATA+TGG | - | chr7_1:75215480-75215499 | None:intergenic | 40.0% |
| CCATATAGTCCACTTGGTAA+AGG | + | chr7_1:75215477-75215496 | Msa1038400:CDS | 40.0% | |
| !!! | AAAGGTTTTTTTGCCGGCAA+AGG | + | chr7_1:75215495-75215514 | Msa1038400:CDS | 40.0% |
| TGAGAACTTGGTCAAGAACA+AGG | + | chr7_1:75215875-75215894 | Msa1038400:CDS | 40.0% | |
| GAAAGTCTTAGCAAGAAGCA+TGG | + | chr7_1:75215915-75215934 | Msa1038400:CDS | 40.0% | |
| TGCTCAGTTAGCATTAGCAT+GGG | + | chr7_1:75215947-75215966 | Msa1038400:CDS | 40.0% | |
| ! | TTTGATGGCAGTCTCTTAAC+TGG | + | chr7_1:75216058-75216077 | Msa1038400:intron | 40.0% |
| GTACTCAGGTTACTAACCAA+AGG | + | chr7_1:75216530-75216549 | Msa1038400:intron | 40.0% | |
| ! | TTAGGTGGAAAGCATATGCT+TGG | - | chr7_1:75216596-75216615 | None:intergenic | 40.0% |
| GAGAATCTGGATCAAAACCT+TGG | + | chr7_1:75216686-75216705 | Msa1038400:CDS | 40.0% | |
| AGCAGTGAAACTATCAGAAG+AGG | + | chr7_1:75216715-75216734 | Msa1038400:CDS | 40.0% | |
| GTTCCTGAAGATGATATAGC+AGG | + | chr7_1:75216761-75216780 | Msa1038400:CDS | 40.0% | |
| CTACCTGCTATATCATCTTC+AGG | - | chr7_1:75216767-75216786 | None:intergenic | 40.0% | |
| GCAGGTAGTAGATACTACAA+TGG | + | chr7_1:75216779-75216798 | Msa1038400:CDS | 40.0% | |
| CACACCTCCAAAAGTTTCAA+CGG | + | chr7_1:75216832-75216851 | Msa1038400:CDS | 40.0% | |
| ! | GTTGAGACCGTTGAAACTTT+TGG | - | chr7_1:75216842-75216861 | None:intergenic | 40.0% |
| ATATATACGCATGCGCATCG+CGG | - | chr7_1:75214030-75214049 | None:intergenic | 45.0% | |
| GTGATGATACCTCAAAGCCT+TGG | - | chr7_1:75214166-75214185 | None:intergenic | 45.0% | |
| GCTGATGTTTATGGACTCGA+TGG | + | chr7_1:75214400-75214419 | Msa1038400:CDS | 45.0% | |
| GATGTTTATGGACTCGATGG+TGG | + | chr7_1:75214403-75214422 | Msa1038400:CDS | 45.0% | |
| AGCTACAAGAATCGGAGGTT+AGG | + | chr7_1:75214467-75214486 | Msa1038400:intron | 45.0% | |
| GTTAGGTAGTTCCCCTATAG+AGG | + | chr7_1:75214484-75214503 | Msa1038400:intron | 45.0% | |
| TTGAACCAGGACCTCTATAG+GGG | - | chr7_1:75214498-75214517 | None:intergenic | 45.0% | |
| TAGAGGTCCTGGTTCAAATC+CGG | + | chr7_1:75214501-75214520 | Msa1038400:intron | 45.0% | |
| CATTTGTCCGGATTTGAACC+AGG | - | chr7_1:75214511-75214530 | None:intergenic | 45.0% | |
| ACTTCCCAGAGAAAAGATCC+AGG | + | chr7_1:75214660-75214679 | Msa1038400:CDS | 45.0% | |
| TATGGGCATCAAAGGTTCAC+CGG | + | chr7_1:75214720-75214739 | Msa1038400:CDS | 45.0% | |
| CGATACAACTGTGCCTATTG+AGG | + | chr7_1:75214822-75214841 | Msa1038400:CDS | 45.0% | |
| ACTCCCCTACCTCTATAAAC+TGG | + | chr7_1:75214966-75214985 | Msa1038400:intron | 45.0% | |
| AAGCCAGCCCTGATACAATA+AGG | + | chr7_1:75215138-75215157 | Msa1038400:CDS | 45.0% | |
| TCTCCTTATTGTATCAGGGC+TGG | - | chr7_1:75215144-75215163 | None:intergenic | 45.0% | |
| GAGTTCCTCTCTAAGTTCAC+AGG | + | chr7_1:75215261-75215280 | Msa1038400:intron | 45.0% | |
| ATCTTCGAGAACTCCTTTGC+CGG | - | chr7_1:75215511-75215530 | None:intergenic | 45.0% | |
| TCTTGACCAAGTTCTCAGCT+TGG | - | chr7_1:75215872-75215891 | None:intergenic | 45.0% | |
| CTGCTCAGTTAGCATTAGCA+TGG | + | chr7_1:75215946-75215965 | Msa1038400:CDS | 45.0% | |
| TTAGCATGGGTACTCCAACA+AGG | + | chr7_1:75215960-75215979 | Msa1038400:CDS | 45.0% | |
| AAGGATGTTGTGCCTATTCC+TGG | + | chr7_1:75215984-75216003 | Msa1038400:CDS | 45.0% | |
| GAGTGTCATCTGATGTACTC+AGG | + | chr7_1:75216516-75216535 | Msa1038400:intron | 45.0% | |
| GTTTCACTGCTAATGCACCA+AGG | - | chr7_1:75216706-75216725 | None:intergenic | 45.0% | |
| AACTATCAGAAGAGGACACG+CGG | + | chr7_1:75216723-75216742 | Msa1038400:CDS | 45.0% | |
| AGGTGTGTTAGCAAACTTCC+AGG | - | chr7_1:75216819-75216838 | None:intergenic | 45.0% | |
| ! | GAGACCGTTGAAACTTTTGG+AGG | - | chr7_1:75216839-75216858 | None:intergenic | 45.0% |
| !!! | TATTTGTTTTTATTATAATT+AGG | - | chr7_1:75216275-75216294 | None:intergenic | 5.0% |
| TATCCTCCTCTGTGTGTCAG+CGG | - | chr7_1:75213984-75214003 | None:intergenic | 50.0% | |
| GAGGAGGATATCACAAAGCG+AGG | + | chr7_1:75213994-75214013 | Msa1038400:five_prime_UTR | 50.0% | |
| TGGGTTCCAAGTGTGACATG+AGG | - | chr7_1:75214146-75214165 | None:intergenic | 50.0% | |
| CATGTCACACTTGGAACCCA+AGG | + | chr7_1:75214146-75214165 | Msa1038400:CDS | 50.0% | |
| ACTTGGAACCCAAGGCTTTG+AGG | + | chr7_1:75214154-75214173 | Msa1038400:CDS | 50.0% | |
| TAGTTCCCCTATAGAGGTCC+TGG | + | chr7_1:75214490-75214509 | Msa1038400:intron | 50.0% | |
| TCCCAGAGAAAAGATCCAGG+TGG | + | chr7_1:75214663-75214682 | Msa1038400:CDS | 50.0% | |
| ! | GCCACCTGGATCTTTTCTCT+GGG | - | chr7_1:75214667-75214686 | None:intergenic | 50.0% |
| ! | AGCCACCTGGATCTTTTCTC+TGG | - | chr7_1:75214668-75214687 | None:intergenic | 50.0% |
| ACCTTTGATGCCCATACCAC+CGG | - | chr7_1:75214716-75214735 | None:intergenic | 50.0% | |
| CAGCTTGAACGCACATACTC+CGG | - | chr7_1:75214742-75214761 | None:intergenic | 50.0% | |
| ACGAGATAGTTCCTCTCTGC+AGG | + | chr7_1:75215231-75215250 | Msa1038400:CDS | 50.0% | |
| ACTCGAACTAACCTGCAGAG+AGG | - | chr7_1:75215245-75215264 | None:intergenic | 50.0% | |
| AAGTTCTCAGCTTGGAAGCG+GGG | - | chr7_1:75215864-75215883 | None:intergenic | 50.0% | |
| CAAGTTCTCAGCTTGGAAGC+GGG | - | chr7_1:75215865-75215884 | None:intergenic | 50.0% | |
| CCAAGTTCTCAGCTTGGAAG+CGG | - | chr7_1:75215866-75215885 | None:intergenic | 50.0% | |
| ATGGGTACTCCAACAAGGCA+AGG | + | chr7_1:75215965-75215984 | Msa1038400:CDS | 50.0% | |
| GCACAACATCCTTGCCTTGT+TGG | - | chr7_1:75215977-75215996 | None:intergenic | 50.0% | |
| ACTATCAGAAGAGGACACGC+GGG | + | chr7_1:75216724-75216743 | Msa1038400:CDS | 50.0% | |
| ATCCTCCTCTGTGTGTCAGC+GGG | - | chr7_1:75213983-75214002 | None:intergenic | 55.0% | |
| TTAGGGTGTATGGCCCTCAG+TGG | + | chr7_1:75214292-75214311 | Msa1038400:CDS | 55.0% | |
| !! | GGTATATCCAGAAGTGCCGG+TGG | + | chr7_1:75214697-75214716 | Msa1038400:CDS | 55.0% |
| !! | ATCCAGAAGTGCCGGTGGTA+TGG | + | chr7_1:75214702-75214721 | Msa1038400:CDS | 55.0% |
| !! | TCCAGAAGTGCCGGTGGTAT+GGG | + | chr7_1:75214703-75214722 | Msa1038400:CDS | 55.0% |
| TCTCTGGACTCGCGACATTG+AGG | + | chr7_1:75215208-75215227 | Msa1038400:CDS | 55.0% | |
| CGAAGATGTGCCGAGCTTCA+TGG | + | chr7_1:75215524-75215543 | Msa1038400:CDS | 55.0% | |
| CCGCTTCCAAGCTGAGAACT+TGG | + | chr7_1:75215863-75215882 | Msa1038400:CDS | 55.0% | |
| CTGTGTGTCAGCGGGGGTTA+TGG | - | chr7_1:75213975-75213994 | None:intergenic | 60.0% | |
| TAACCCCCGCTGACACACAG+AGG | + | chr7_1:75213975-75213994 | Msa1038400:five_prime_UTR | 60.0% | |
| TCCTCCTCTGTGTGTCAGCG+GGG | - | chr7_1:75213982-75214001 | None:intergenic | 60.0% | |
| GCCGGTGGTATGGGCATCAA+AGG | + | chr7_1:75214712-75214731 | Msa1038400:CDS | 60.0% | |
| CCTCCTCTGTGTGTCAGCGG+GGG | - | chr7_1:75213981-75214000 | None:intergenic | 65.0% | |
| GGGTGTATGGCCCTCAGTGG+AGG | + | chr7_1:75214295-75214314 | Msa1038400:CDS | 65.0% | |
| GCCCATACCACCGGCACTTC+TGG | - | chr7_1:75214707-75214726 | None:intergenic | 65.0% | |
| CCCCCGCTGACACACAGAGG+AGG | + | chr7_1:75213978-75213997 | Msa1038400:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 75213938 | 75217089 | 75213938 | ID=Msa1038400;Name=Msa1038400 |
| chr7_1 | mRNA | 75213938 | 75217089 | 75213938 | ID=Msa1038400-mRNA-1;Parent=Msa1038400;Name=Msa1038400-mRNA-1;_AED=0.36;_eAED=0.36;_QI=166|0.83|0.85|1|1|1|7|224|355 |
| chr7_1 | exon | 75213938 | 75214175 | 75213938 | ID=Msa1038400-mRNA-1:exon:19190;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75214277 | 75214447 | 75214277 | ID=Msa1038400-mRNA-1:exon:19191;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75214649 | 75214861 | 75214649 | ID=Msa1038400-mRNA-1:exon:19192;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75215080 | 75215252 | 75215080 | ID=Msa1038400-mRNA-1:exon:19193;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75215455 | 75215545 | 75215455 | ID=Msa1038400-mRNA-1:exon:19194;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75215852 | 75216005 | 75215852 | ID=Msa1038400-mRNA-1:exon:19195;Parent=Msa1038400-mRNA-1 |
| chr7_1 | exon | 75216672 | 75217089 | 75216672 | ID=Msa1038400-mRNA-1:exon:19196;Parent=Msa1038400-mRNA-1 |
| chr7_1 | five_prime_UTR | 75213938 | 75214103 | 75213938 | ID=Msa1038400-mRNA-1:five_prime_utr;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75214104 | 75214175 | 75214104 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75214277 | 75214447 | 75214277 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75214649 | 75214861 | 75214649 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75215080 | 75215252 | 75215080 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75215455 | 75215545 | 75215455 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75215852 | 75216005 | 75215852 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | CDS | 75216672 | 75216865 | 75216672 | ID=Msa1038400-mRNA-1:cds;Parent=Msa1038400-mRNA-1 |
| chr7_1 | three_prime_UTR | 75216866 | 75217089 | 75216866 | ID=Msa1038400-mRNA-1:three_prime_utr;Parent=Msa1038400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
