Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049020 | XP_003589653.1 | 99.203 | 251 | 2 | 0 | 1 | 251 | 1 | 251 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049020 | B7FHH9 | 99.203 | 251 | 2 | 0 | 1 | 251 | 1 | 251 | 0.0 | 516 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012280 | Msa0049020 | 0.958712 | 1.192171e-116 | -8.615850e-47 |
| Msa0049020 | Msa0049060 | 0.849567 | 2.977050e-60 | -8.615850e-47 |
| Msa0049020 | Msa0060950 | 0.949123 | 2.402500e-107 | -8.615850e-47 |
| Msa0049020 | Msa0108810 | 0.946301 | 5.996967e-105 | -8.615850e-47 |
| Msa0049020 | Msa1415840 | 0.979879 | 6.018759e-149 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049020 | MtrunA17_Chr1g0160791 | 99.203 | 251 | 2 | 0 | 1 | 251 | 1 | 251 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049020 | AT1G23110.7 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.4 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.1 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.6 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.3 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.5 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G23110.2 | 69.721 | 251 | 73 | 2 | 1 | 251 | 1 | 248 | 4.47e-130 | 368 |
| Msa0049020 | AT1G70900.1 | 68.526 | 251 | 72 | 2 | 1 | 251 | 1 | 244 | 5.03e-128 | 362 |
Find 90 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGAAGATGTTTAATAAT+TGG | 0.144161 | 1_2:-2181282 | None:intergenic |
| CACGCATATTCGGCTTATTT+TGG | 0.171631 | 1_2:-2176096 | None:intergenic |
| TTCAGGTAGCATTTGCTAAA+AGG | 0.205366 | 1_2:+2180796 | Msa0049020:intron |
| TCTTCCAGTTAATCCATTAA+TGG | 0.209417 | 1_2:+2179922 | Msa0049020:CDS |
| TGAATAAGTGTAACCATTAA+TGG | 0.230670 | 1_2:-2179935 | None:intergenic |
| TTGTATGCCAATTCATTAAT+TGG | 0.241173 | 1_2:+2177826 | Msa0049020:CDS |
| ATGTTCATTAGTTAATTTAT+TGG | 0.267527 | 1_2:+2181204 | Msa0049020:three_prime_UTR |
| GCACAAAATGTCATCATTAA+TGG | 0.269537 | 1_2:+2180857 | Msa0049020:CDS |
| CTGGGCCAGCAATTTCTTGC+TGG | 0.276545 | 1_2:-2177147 | None:intergenic |
| ACCAGATGCAATTCAACTTC+TGG | 0.290522 | 1_2:-2177166 | None:intergenic |
| TTACTTTCTTCTGTTGTAGT+TGG | 0.302779 | 1_2:+2181181 | Msa0049020:three_prime_UTR |
| TTTATAATCTTAACTATTGC+TGG | 0.304439 | 1_2:-2181084 | None:intergenic |
| CACAAAATGTCATCATTAAT+GGG | 0.310527 | 1_2:+2180858 | Msa0049020:CDS |
| GTAACCATTAATGGATTAAC+TGG | 0.336183 | 1_2:-2179926 | None:intergenic |
| TTCACTCCAAGAGCTATAAA+AGG | 0.340939 | 1_2:-2177694 | None:intergenic |
| TTAGTTAATTTATTGGAGAT+AGG | 0.353074 | 1_2:+2181211 | Msa0049020:three_prime_UTR |
| TCATTAAGCAATAATATTAA+CGG | 0.356709 | 1_2:-2181255 | None:intergenic |
| CAAATAATAGCTGGTTTGAT+TGG | 0.356731 | 1_2:+2176054 | None:intergenic |
| TCCAACTCCAATTAATGAAT+TGG | 0.359861 | 1_2:-2177833 | None:intergenic |
| GTTGAAGTTCCACCCGTTGA+TGG | 0.369925 | 1_2:-2177318 | None:intergenic |
| TGGCATCTTGCTGCTGCTGT+TGG | 0.370168 | 1_2:+2180939 | Msa0049020:CDS |
| CTTGCTGCTGCTGTTGGCGT+AGG | 0.370230 | 1_2:+2180945 | Msa0049020:CDS |
| TATATAGCTCCACGCATATT+CGG | 0.382156 | 1_2:-2176106 | None:intergenic |
| AGTTATGTTTATATTGTAGC+TGG | 0.388062 | 1_2:+2181124 | Msa0049020:three_prime_UTR |
| GTGTGAGCCATTCTCAAGTC+TGG | 0.396348 | 1_2:-2180831 | None:intergenic |
| TCAGGTAGCATTTGCTAAAA+GGG | 0.403276 | 1_2:+2180797 | Msa0049020:intron |
| GATTAAGATAGAAATTATAA+TGG | 0.409267 | 1_2:-2181300 | None:intergenic |
| ATGCCGCCATCAGCAACTTC+GGG | 0.411544 | 1_2:-2179889 | None:intergenic |
| CCAGATGCAATTCAACTTCT+GGG | 0.413188 | 1_2:-2177165 | None:intergenic |
| GCCAATTCATTAATTGGAGT+TGG | 0.425449 | 1_2:+2177832 | Msa0049020:CDS |
| TATTCATACTCTGCACATAA+TGG | 0.426676 | 1_2:-2181028 | None:intergenic |
| TTGGAGATAGGGATTTGTAT+AGG | 0.428957 | 1_2:+2181223 | Msa0049020:three_prime_UTR |
| GATGCCGCCATCAGCAACTT+CGG | 0.434740 | 1_2:-2179890 | None:intergenic |
| CTTAACTATTGCTGGTTACA+AGG | 0.438636 | 1_2:-2181076 | None:intergenic |
| CCCAGAAGTTGAATTGCATC+TGG | 0.439703 | 1_2:+2177165 | Msa0049020:five_prime_UTR |
| TAGTTAATTTATTGGAGATA+GGG | 0.440772 | 1_2:+2181212 | Msa0049020:three_prime_UTR |
| ACTTATTCACACTGGGATGA+TGG | 0.450402 | 1_2:+2179949 | Msa0049020:CDS |
| AGAGCCCTTGAGGGTGTCCA+TGG | 0.461445 | 1_2:+2177231 | Msa0049020:CDS |
| GTTATGTTTATATTGTAGCT+GGG | 0.468914 | 1_2:+2181125 | Msa0049020:three_prime_UTR |
| TGGTGCCAGCAAGAAATTGC+TGG | 0.485808 | 1_2:+2177142 | Msa0049020:five_prime_UTR |
| GGAGGTCTTCATCCATCAAC+GGG | 0.486108 | 1_2:+2177306 | Msa0049020:CDS |
| TACAGCACTCTTGAACCAAC+TGG | 0.486971 | 1_2:+2177122 | Msa0049020:five_prime_UTR |
| CTACTCGAGAAGCTTATTGC+AGG | 0.492357 | 1_2:-2180970 | None:intergenic |
| GAATTGCATCTGGTCTAGTC+AGG | 0.495250 | 1_2:+2177175 | Msa0049020:five_prime_UTR |
| GGAAGATGCTTACTTAAGTC+GGG | 0.495469 | 1_2:-2176136 | None:intergenic |
| TTACTCTCTGTCAAAGAAAA+CGG | 0.507422 | 1_2:-2177276 | None:intergenic |
| AGGAAGATGCTTACTTAAGT+CGG | 0.509199 | 1_2:-2176137 | None:intergenic |
| GAAGTAGAACAAATAATAGC+TGG | 0.510746 | 1_2:+2176045 | None:intergenic |
| TGCCATGCAGCATGAAGGTA+TGG | 0.516087 | 1_2:-2180921 | None:intergenic |
| GAGCCCTTGAGGGTGTCCAT+GGG | 0.521864 | 1_2:+2177232 | Msa0049020:CDS |
| ACATTACTTGTAGACGGGTA+TGG | 0.528584 | 1_2:+2177470 | Msa0049020:intron |
| CATTGTAGTGCTAGTTGTCA+TGG | 0.530052 | 1_2:+2177523 | Msa0049020:CDS |
| AATTTCTTGCTGGCACCAGT+TGG | 0.533337 | 1_2:-2177137 | None:intergenic |
| GTCAAAGAAAACGGTGAATG+AGG | 0.534729 | 1_2:-2177267 | None:intergenic |
| TGGTTACACTTATTCACACT+GGG | 0.539486 | 1_2:+2179942 | Msa0049020:CDS |
| CCGTACTGCAGTGTCTGTCA+AGG | 0.540712 | 1_2:+2179849 | Msa0049020:intron |
| TTCATTAATTGGAGTTGGAG+TGG | 0.540804 | 1_2:+2177837 | Msa0049020:CDS |
| CTCCATACCTTCATGCTGCA+TGG | 0.543276 | 1_2:+2180919 | Msa0049020:CDS |
| ATGGTTACACTTATTCACAC+TGG | 0.543526 | 1_2:+2179941 | Msa0049020:CDS |
| AATCATAGTAGAGCCCTTGA+GGG | 0.544572 | 1_2:+2177222 | Msa0049020:CDS |
| AGCTGAGGAAATATTTGAGA+TGG | 0.555169 | 1_2:+2177890 | Msa0049020:CDS |
| CAAGATGCCATGCAGCATGA+AGG | 0.556021 | 1_2:-2180926 | None:intergenic |
| TGGATAGGTCTCAAGCATGC+AGG | 0.558026 | 1_2:-2177502 | None:intergenic |
| GAACCCCATGGACACCCTCA+AGG | 0.559915 | 1_2:-2177236 | None:intergenic |
| GAATCATAGTAGAGCCCTTG+AGG | 0.562280 | 1_2:+2177221 | Msa0049020:CDS |
| GAAAGATCCAGACTTGAGAA+TGG | 0.562355 | 1_2:+2180824 | Msa0049020:CDS |
| CAAAATAAGCCGAATATGCG+TGG | 0.565542 | 1_2:+2176097 | Msa0049020:five_prime_UTR |
| TGCATACACTACTAACATTG+TGG | 0.582508 | 1_2:+2180998 | Msa0049020:three_prime_UTR |
| CAACTAGCACTACAATGGAT+AGG | 0.589791 | 1_2:-2177517 | None:intergenic |
| TGGAGGTCTTCATCCATCAA+CGG | 0.597327 | 1_2:+2177305 | Msa0049020:CDS |
| CATGACAACTAGCACTACAA+TGG | 0.598876 | 1_2:-2177522 | None:intergenic |
| AACCCCATGGACACCCTCAA+GGG | 0.598877 | 1_2:-2177235 | None:intergenic |
| AGTGTGTATCATTGTTCAAG+AGG | 0.603766 | 1_2:+2177865 | Msa0049020:CDS |
| TGAAAACCCGAAGTTGCTGA+TGG | 0.606713 | 1_2:+2179883 | Msa0049020:CDS |
| CGTACTGCAGTGTCTGTCAA+GGG | 0.610659 | 1_2:+2179850 | Msa0049020:intron |
| CAAAATGTCATCATTAATGG+GGG | 0.614239 | 1_2:+2180860 | Msa0049020:CDS |
| GGGTGTCCATGGGGTTCACG+TGG | 0.615207 | 1_2:+2177242 | Msa0049020:CDS |
| ACAAAATGTCATCATTAATG+GGG | 0.617550 | 1_2:+2180859 | Msa0049020:CDS |
| ATTGTTCAAGAGGGAAGCTG+AGG | 0.630623 | 1_2:+2177875 | Msa0049020:CDS |
| CTCTTGGAGTGAATGCCCCA+AGG | 0.633390 | 1_2:+2177704 | Msa0049020:CDS |
| GTGTGTATCATTGTTCAAGA+GGG | 0.637169 | 1_2:+2177866 | Msa0049020:CDS |
| GAGGCACCACGTGAACCCCA+TGG | 0.642175 | 1_2:-2177248 | None:intergenic |
| AGCCCTTGAGGGTGTCCATG+GGG | 0.647945 | 1_2:+2177233 | Msa0049020:CDS |
| ACAGAGAGTAATCAAAGTGG+AGG | 0.655486 | 1_2:+2177288 | Msa0049020:CDS |
| TTGACAGAGAGTAATCAAAG+TGG | 0.672739 | 1_2:+2177285 | Msa0049020:CDS |
| AAACCCGAAGTTGCTGATGG+CGG | 0.674850 | 1_2:+2179886 | Msa0049020:CDS |
| GGTCTTCATCCATCAACGGG+TGG | 0.677085 | 1_2:+2177309 | Msa0049020:CDS |
| TATTCACACTGGGATGATGG+AGG | 0.677284 | 1_2:+2179952 | Msa0049020:CDS |
| AAAATGTCATCATTAATGGG+GGG | 0.708086 | 1_2:+2180861 | Msa0049020:CDS |
| TCAGGCACATGAGTCAACAG+AGG | 0.745998 | 1_2:+2177193 | Msa0049020:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATAATAATATAT+TGG | - | chr1_2:2176396-2176415 | None:intergenic | 0.0% |
| !!! | TTATTTAATTTTTATTTTTT+GGG | + | chr1_2:2179598-2179617 | Msa0049020:intron | 0.0% |
| !!! | TTATTTATTTTTTATTTTTT+TGG | + | chr1_2:2179691-2179710 | Msa0049020:intron | 0.0% |
| !!! | TATTTATTTTTTATTTTTTT+GGG | + | chr1_2:2179692-2179711 | Msa0049020:intron | 0.0% |
| !! | AATATAAAACTTGAAATATA+GGG | - | chr1_2:2179757-2179776 | None:intergenic | 10.0% |
| !! | AAATATAAAACTTGAAATAT+AGG | - | chr1_2:2179758-2179777 | None:intergenic | 10.0% |
| !! | AACTAAAATAATAACAAATT+AGG | - | chr1_2:2179791-2179810 | None:intergenic | 10.0% |
| !!! | TTTTGATAAGGAAAAAAAAA+AGG | - | chr1_2:2176173-2176192 | None:intergenic | 15.0% |
| !!! | ATATTTAATTAGTAGTTTTC+TGG | + | chr1_2:2176482-2176501 | Msa0049020:intron | 15.0% |
| !!! | TTTGATTTAATGAAAATTCT+GGG | + | chr1_2:2176556-2176575 | Msa0049020:intron | 15.0% |
| !!! | TTATTTTTTGTGATAGTATA+AGG | + | chr1_2:2177409-2177428 | Msa0049020:intron | 15.0% |
| !! | ATAGTAGAACAAAAAAAAAT+GGG | + | chr1_2:2178373-2178392 | Msa0049020:intron | 15.0% |
| !! | AAAACAAAAAAAAAAGGTTT+AGG | + | chr1_2:2178463-2178482 | Msa0049020:intron | 15.0% |
| !! | AAACAAAAAAAAAAGGTTTA+GGG | + | chr1_2:2178464-2178483 | Msa0049020:intron | 15.0% |
| !! | TTATTACAATGAAATAATGA+AGG | + | chr1_2:2178790-2178809 | Msa0049020:intron | 15.0% |
| !!! | CATGTTTATATTTTATATAG+AGG | + | chr1_2:2179322-2179341 | Msa0049020:intron | 15.0% |
| !! | ATAATGTTAATTAGTTAACT+TGG | - | chr1_2:2180062-2180081 | None:intergenic | 15.0% |
| !!! | AAATTTAAGACTTTATTTAC+GGG | - | chr1_2:2180527-2180546 | None:intergenic | 15.0% |
| !!! | CAAATTTAAGACTTTATTTA+CGG | - | chr1_2:2180528-2180547 | None:intergenic | 15.0% |
| !!! | ATTACATCTAATACTTTTTT+TGG | - | chr1_2:2180680-2180699 | None:intergenic | 15.0% |
| !! | AAGAAAGTAAAAAAAAATAC+TGG | - | chr1_2:2181171-2181190 | None:intergenic | 15.0% |
| !! | ATGTTCATTAGTTAATTTAT+TGG | + | chr1_2:2181204-2181223 | Msa0049020:three_prime_UTR | 15.0% |
| !! | TCATTAAGCAATAATATTAA+CGG | - | chr1_2:2181258-2181277 | None:intergenic | 15.0% |
| !! | GAGAATATGTGTTTATTTAT+AGG | - | chr1_2:2176287-2176306 | None:intergenic | 20.0% |
| !! | TAATTTATTTACTTTGCTTC+AGG | + | chr1_2:2176343-2176362 | Msa0049020:intron | 20.0% |
| !!! | TTCAATTAAAGGGATATTTT+GGG | + | chr1_2:2176441-2176460 | Msa0049020:intron | 20.0% |
| !!! | GTTTGATTTAATGAAAATTC+TGG | + | chr1_2:2176555-2176574 | Msa0049020:intron | 20.0% |
| !!! | AGTTTAAAATATGACATCAT+AGG | + | chr1_2:2176660-2176679 | Msa0049020:intron | 20.0% |
| !!! | TGCAAACATAATTTTGTTTA+TGG | + | chr1_2:2176831-2176850 | Msa0049020:intron | 20.0% |
| !!! | TTTTATTGTTACATTGGTAT+TGG | - | chr1_2:2178306-2178325 | None:intergenic | 20.0% |
| !!! | GCATTTTTTTATTGTTACAT+TGG | - | chr1_2:2178312-2178331 | None:intergenic | 20.0% |
| !! | CATAGTAGAACAAAAAAAAA+TGG | + | chr1_2:2178372-2178391 | Msa0049020:intron | 20.0% |
| !! | CAGTGAAAAACAAAAAAAAA+AGG | + | chr1_2:2178457-2178476 | Msa0049020:intron | 20.0% |
| !!! | GTTTATATTTTATATAGAGG+AGG | + | chr1_2:2179325-2179344 | Msa0049020:intron | 20.0% |
| !! | TGAATTTGTGAAAATTAACT+AGG | - | chr1_2:2179508-2179527 | None:intergenic | 20.0% |
| !!! | GTTAATTTTCACAAATTCAA+TGG | + | chr1_2:2179509-2179528 | Msa0049020:intron | 20.0% |
| !! | CTAATTAACATTATATTTCG+AGG | + | chr1_2:2180068-2180087 | Msa0049020:intron | 20.0% |
| !!! | CTCAAAAATAAAAAGCATTA+TGG | - | chr1_2:2180227-2180246 | None:intergenic | 20.0% |
| !! | CAAATTATTGTCAGTATTAA+TGG | - | chr1_2:2180316-2180335 | None:intergenic | 20.0% |
| !! | TAATGCTAATGATACTTATA+AGG | + | chr1_2:2180380-2180399 | Msa0049020:intron | 20.0% |
| !! | TAATGATACTTATAAGGATA+AGG | + | chr1_2:2180386-2180405 | Msa0049020:intron | 20.0% |
| !! | AGATATTCAATATTACATTC+CGG | + | chr1_2:2180483-2180502 | Msa0049020:intron | 20.0% |
| !!! | AATACTTTTCCTCTATAATA+TGG | + | chr1_2:2180651-2180670 | Msa0049020:intron | 20.0% |
| !! | TTTATAATCTTAACTATTGC+TGG | - | chr1_2:2181087-2181106 | None:intergenic | 20.0% |
| !! | TTAGTTAATTTATTGGAGAT+AGG | + | chr1_2:2181211-2181230 | Msa0049020:three_prime_UTR | 20.0% |
| !! | TAGTTAATTTATTGGAGATA+GGG | + | chr1_2:2181212-2181231 | Msa0049020:three_prime_UTR | 20.0% |
| !! | AATGGAAGATGTTTAATAAT+TGG | - | chr1_2:2181285-2181304 | None:intergenic | 20.0% |
| ! | AAAAAAAAGGAATAAGAGAG+AGG | - | chr1_2:2176160-2176179 | None:intergenic | 25.0% |
| !! | GTTCAATTAAAGGGATATTT+TGG | + | chr1_2:2176440-2176459 | Msa0049020:intron | 25.0% |
| !! | TCAATTAAAGGGATATTTTG+GGG | + | chr1_2:2176442-2176461 | Msa0049020:intron | 25.0% |
| ! | AGCATAAATCACAAAATGAT+GGG | - | chr1_2:2176604-2176623 | None:intergenic | 25.0% |
| ! | TAGCATAAATCACAAAATGA+TGG | - | chr1_2:2176605-2176624 | None:intergenic | 25.0% |
| !! | TTTCAGTTATCTGAAATGTT+TGG | + | chr1_2:2176689-2176708 | Msa0049020:intron | 25.0% |
| ! | GTACATAATCTGTTATTGTT+TGG | + | chr1_2:2176869-2176888 | Msa0049020:intron | 25.0% |
| !!! | TATTTTTATCGCAGAATTGT+TGG | + | chr1_2:2177093-2177112 | Msa0049020:intron | 25.0% |
| !! | ATTTTTATCGCAGAATTGTT+GGG | + | chr1_2:2177094-2177113 | Msa0049020:intron | 25.0% |
| ! | AAAACAAGAACAACATCAAA+TGG | - | chr1_2:2177564-2177583 | None:intergenic | 25.0% |
| ! | CATAAGACTAGATTATTCTA+AGG | - | chr1_2:2177587-2177606 | None:intergenic | 25.0% |
| !!! | GATGAATTTTTTTGCAATGT+AGG | + | chr1_2:2177785-2177804 | Msa0049020:intron | 25.0% |
| ! | TTGTATGCCAATTCATTAAT+TGG | + | chr1_2:2177826-2177845 | Msa0049020:CDS | 25.0% |
| ! | AGATAGACATGAATAACTAA+AGG | + | chr1_2:2177963-2177982 | Msa0049020:intron | 25.0% |
| ! | AGACTATATATGTTATACTC+TGG | + | chr1_2:2178035-2178054 | Msa0049020:intron | 25.0% |
| ! | AGATTCAATGTAAATTCAAC+TGG | + | chr1_2:2178277-2178296 | Msa0049020:intron | 25.0% |
| ! | TTAAATTTGAACCGTTTGAA+GGG | - | chr1_2:2178566-2178585 | None:intergenic | 25.0% |
| ! | TTCAAACGGTTCAAATTTAA+GGG | + | chr1_2:2178566-2178585 | Msa0049020:intron | 25.0% |
| ! | TAAGAATCCTATCTATAGAA+GGG | - | chr1_2:2178995-2179014 | None:intergenic | 25.0% |
| ! | TCTTAGAAGAGTTTATATAG+AGG | + | chr1_2:2179010-2179029 | Msa0049020:intron | 25.0% |
| ! | TCTTAGAAGAGTTTATATAG+AGG | + | chr1_2:2179010-2179029 | Msa0049020:intron | 25.0% |
| ! | ATCTACATATTTCATTTCTG+TGG | + | chr1_2:2179457-2179476 | Msa0049020:intron | 25.0% |
| !!! | TTTTGGGTTAACTAAACATT+CGG | + | chr1_2:2179614-2179633 | Msa0049020:intron | 25.0% |
| !!! | AGTACGGTTTTATAGAAAAT+AGG | - | chr1_2:2179836-2179855 | None:intergenic | 25.0% |
| ! | TGAATAAGTGTAACCATTAA+TGG | - | chr1_2:2179938-2179957 | None:intergenic | 25.0% |
| ! | TTGCTTTCAAATATTTGCAA+TGG | + | chr1_2:2179979-2179998 | Msa0049020:intron | 25.0% |
| ! | ATTATTGTCAGTATTAATGG+TGG | - | chr1_2:2180313-2180332 | None:intergenic | 25.0% |
| !! | GACATATTTTACTCATTATG+TGG | - | chr1_2:2180461-2180480 | None:intergenic | 25.0% |
| ! | GATATTCAATATTACATTCC+GGG | + | chr1_2:2180484-2180503 | Msa0049020:intron | 25.0% |
| !!! | TTTTGGTAACCATATTATAG+AGG | - | chr1_2:2180663-2180682 | None:intergenic | 25.0% |
| ! | CACAAAATGTCATCATTAAT+GGG | + | chr1_2:2180858-2180877 | Msa0049020:CDS | 25.0% |
| ! | ACAAAATGTCATCATTAATG+GGG | + | chr1_2:2180859-2180878 | Msa0049020:CDS | 25.0% |
| !!! | AGTTTTAGGGAATAAATCAT+CGG | - | chr1_2:2180901-2180920 | None:intergenic | 25.0% |
| ! | AGTTATGTTTATATTGTAGC+TGG | + | chr1_2:2181124-2181143 | Msa0049020:three_prime_UTR | 25.0% |
| ! | GTTATGTTTATATTGTAGCT+GGG | + | chr1_2:2181125-2181144 | Msa0049020:three_prime_UTR | 25.0% |
| !!! | AGCGCGTTTTTATTTTGATA+AGG | - | chr1_2:2176185-2176204 | None:intergenic | 30.0% |
| TGCTGTTAGAGTTCAATTAA+AGG | + | chr1_2:2176430-2176449 | Msa0049020:intron | 30.0% | |
| GCTGTTAGAGTTCAATTAAA+GGG | + | chr1_2:2176431-2176450 | Msa0049020:intron | 30.0% | |
| GCATAAATCACAAAATGATG+GGG | - | chr1_2:2176603-2176622 | None:intergenic | 30.0% | |
| TCTGTTATTGTTTGGTTGTT+AGG | + | chr1_2:2176877-2176896 | Msa0049020:intron | 30.0% | |
| CTGTTATTGTTTGGTTGTTA+GGG | + | chr1_2:2176878-2176897 | Msa0049020:intron | 30.0% | |
| TTACTCTCTGTCAAAGAAAA+CGG | - | chr1_2:2177279-2177298 | None:intergenic | 30.0% | |
| ! | TCAATTCCTTTTATAGCTCT+TGG | + | chr1_2:2177688-2177707 | Msa0049020:CDS | 30.0% |
| TTGGAGGAAAATATTACCTT+GGG | - | chr1_2:2177723-2177742 | None:intergenic | 30.0% | |
| ATTGGAGGAAAATATTACCT+TGG | - | chr1_2:2177724-2177743 | None:intergenic | 30.0% | |
| ! | TAAGATATCTTTCTAGCCAA+AGG | - | chr1_2:2177758-2177777 | None:intergenic | 30.0% |
| TCCAACTCCAATTAATGAAT+TGG | - | chr1_2:2177836-2177855 | None:intergenic | 30.0% | |
| CAATAATATGCAAAATCCCT+TGG | + | chr1_2:2177991-2178010 | Msa0049020:intron | 30.0% | |
| !!! | TCGCACTTTTTTTTTACCAA+GGG | - | chr1_2:2178010-2178029 | None:intergenic | 30.0% |
| !!! | TTCGCACTTTTTTTTTACCA+AGG | - | chr1_2:2178011-2178030 | None:intergenic | 30.0% |
| TATATGTTATACTCTGGACT+TGG | + | chr1_2:2178041-2178060 | Msa0049020:intron | 30.0% | |
| AGAGATTGTATAAGAAACAG+AGG | + | chr1_2:2178216-2178235 | Msa0049020:intron | 30.0% | |
| AACACAGAACATGTAATGAA+TGG | + | chr1_2:2178344-2178363 | Msa0049020:intron | 30.0% | |
| ! | AAAAAGGTTTAGGGTGAAAA+CGG | + | chr1_2:2178473-2178492 | Msa0049020:intron | 30.0% |
| CTTAAATTTGAACCGTTTGA+AGG | - | chr1_2:2178567-2178586 | None:intergenic | 30.0% | |
| CTTCAAACGGTTCAAATTTA+AGG | + | chr1_2:2178565-2178584 | Msa0049020:intron | 30.0% | |
| AAGAATCCTATCTATAGAAG+GGG | - | chr1_2:2178994-2179013 | None:intergenic | 30.0% | |
| CTAAGAATCCTATCTATAGA+AGG | - | chr1_2:2178996-2179015 | None:intergenic | 30.0% | |
| TAGAAGAGTTTATATAGAGG+AGG | + | chr1_2:2179013-2179032 | Msa0049020:intron | 30.0% | |
| TATTGCAAAACATCAAGTGT+TGG | + | chr1_2:2179423-2179442 | Msa0049020:intron | 30.0% | |
| CATATTTCATTTCTGTGGTT+TGG | + | chr1_2:2179462-2179481 | Msa0049020:intron | 30.0% | |
| ! | AAATTCAATGGTTCTGTCTT+CGG | + | chr1_2:2179521-2179540 | Msa0049020:intron | 30.0% |
| TGAAATATAGGGAAAAATGC+AGG | - | chr1_2:2179746-2179765 | None:intergenic | 30.0% | |
| TCTTCCAGTTAATCCATTAA+TGG | + | chr1_2:2179922-2179941 | Msa0049020:CDS | 30.0% | |
| !! | GTAACCATTAATGGATTAAC+TGG | - | chr1_2:2179929-2179948 | None:intergenic | 30.0% |
| TCTATGTTGTAAACATGTGT+AGG | + | chr1_2:2180183-2180202 | Msa0049020:intron | 30.0% | |
| ! | AGTCTTAAATTTGAGTGTTG+TGG | + | chr1_2:2180535-2180554 | Msa0049020:intron | 30.0% |
| ! | TTAAATTTGAGTGTTGTGGA+CGG | + | chr1_2:2180539-2180558 | Msa0049020:intron | 30.0% |
| !!! | ATTTGACAAGCCACTTTTAA+TGG | - | chr1_2:2180591-2180610 | None:intergenic | 30.0% |
| !! | TATAGAGGAAAAGTATTCAC+CGG | - | chr1_2:2180648-2180667 | None:intergenic | 30.0% |
| GCACAAAATGTCATCATTAA+TGG | + | chr1_2:2180857-2180876 | Msa0049020:CDS | 30.0% | |
| CAAAATGTCATCATTAATGG+GGG | + | chr1_2:2180860-2180879 | Msa0049020:CDS | 30.0% | |
| AAAATGTCATCATTAATGGG+GGG | + | chr1_2:2180861-2180880 | Msa0049020:CDS | 30.0% | |
| TATTCATACTCTGCACATAA+TGG | - | chr1_2:2181031-2181050 | None:intergenic | 30.0% | |
| TTACTTTCTTCTGTTGTAGT+TGG | + | chr1_2:2181181-2181200 | Msa0049020:three_prime_UTR | 30.0% | |
| TATATAGCTCCACGCATATT+CGG | - | chr1_2:2176109-2176128 | None:intergenic | 35.0% | |
| AGGAAGATGCTTACTTAAGT+CGG | - | chr1_2:2176140-2176159 | None:intergenic | 35.0% | |
| TTATAGGAGAAGTGAGATGA+GGG | - | chr1_2:2176271-2176290 | None:intergenic | 35.0% | |
| TTTATAGGAGAAGTGAGATG+AGG | - | chr1_2:2176272-2176291 | None:intergenic | 35.0% | |
| ! | ATTTACTTTGCTTCAGGTTC+AGG | + | chr1_2:2176349-2176368 | Msa0049020:intron | 35.0% |
| ACTCTAACAGCAATGAAACA+GGG | - | chr1_2:2176422-2176441 | None:intergenic | 35.0% | |
| AACTCTAACAGCAATGAAAC+AGG | - | chr1_2:2176423-2176442 | None:intergenic | 35.0% | |
| ! | AACCACTGTGATTTTGCTAA+TGG | + | chr1_2:2176742-2176761 | Msa0049020:intron | 35.0% |
| TACCATTAGCAAAATCACAG+TGG | - | chr1_2:2176747-2176766 | None:intergenic | 35.0% | |
| ! | CTGTGATTTTGCTAATGGTA+AGG | + | chr1_2:2176747-2176766 | Msa0049020:intron | 35.0% |
| ! | TAATGGTAAGGTTTGAAGCT+TGG | + | chr1_2:2176759-2176778 | Msa0049020:intron | 35.0% |
| AGGTGTGTTTGACAAAATCA+CGG | - | chr1_2:2176787-2176806 | None:intergenic | 35.0% | |
| ! | CAGTATTAGCTTAGCTGTAA+TGG | - | chr1_2:2176921-2176940 | None:intergenic | 35.0% |
| CATTACAGCTAAGCTAATAC+TGG | + | chr1_2:2176919-2176938 | Msa0049020:intron | 35.0% | |
| !!! | GTATCTAGCAGTTTTTTGTG+TGG | + | chr1_2:2177019-2177038 | Msa0049020:intron | 35.0% |
| TTGACAGAGAGTAATCAAAG+TGG | + | chr1_2:2177285-2177304 | Msa0049020:CDS | 35.0% | |
| ATGTAGTCGGTTAGTATTCA+GGG | - | chr1_2:2177454-2177473 | None:intergenic | 35.0% | |
| AATGTAGTCGGTTAGTATTC+AGG | - | chr1_2:2177455-2177474 | None:intergenic | 35.0% | |
| !! | GAATAATCTAGTCTTATGCG+TGG | + | chr1_2:2177589-2177608 | Msa0049020:intron | 35.0% |
| AAGATGTTGATCACCTGATA+CGG | - | chr1_2:2177641-2177660 | None:intergenic | 35.0% | |
| TTCACTCCAAGAGCTATAAA+AGG | - | chr1_2:2177697-2177716 | None:intergenic | 35.0% | |
| TGGAGGAAAATATTACCTTG+GGG | - | chr1_2:2177722-2177741 | None:intergenic | 35.0% | |
| ! | AAGGAATTTAGGATGATTGG+AGG | - | chr1_2:2177739-2177758 | None:intergenic | 35.0% |
| ! | CCAAAGGAATTTAGGATGAT+TGG | - | chr1_2:2177742-2177761 | None:intergenic | 35.0% |
| CCAATCATCCTAAATTCCTT+TGG | + | chr1_2:2177739-2177758 | Msa0049020:intron | 35.0% | |
| ! | CTTTCTAGCCAAAGGAATTT+AGG | - | chr1_2:2177750-2177769 | None:intergenic | 35.0% |
| GCCAATTCATTAATTGGAGT+TGG | + | chr1_2:2177832-2177851 | Msa0049020:CDS | 35.0% | |
| TTCATTAATTGGAGTTGGAG+TGG | + | chr1_2:2177837-2177856 | Msa0049020:CDS | 35.0% | |
| AGTGTGTATCATTGTTCAAG+AGG | + | chr1_2:2177865-2177884 | Msa0049020:CDS | 35.0% | |
| GTGTGTATCATTGTTCAAGA+GGG | + | chr1_2:2177866-2177885 | Msa0049020:CDS | 35.0% | |
| AGCTGAGGAAATATTTGAGA+TGG | + | chr1_2:2177890-2177909 | Msa0049020:CDS | 35.0% | |
| TATACTCTGGACTTGGAAAT+TGG | + | chr1_2:2178048-2178067 | Msa0049020:intron | 35.0% | |
| !! | AGCGACATATTTTAGAGACT+TGG | - | chr1_2:2178082-2178101 | None:intergenic | 35.0% |
| TTAAACCCTCATAGTTCTCT+AGG | - | chr1_2:2178742-2178761 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_2:2179057-2179076 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_2:2179057-2179076 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_2:2179057-2179076 | None:intergenic | 35.0% | |
| !! | AACATCAAGTGTTGGCTAAT+TGG | + | chr1_2:2179431-2179450 | Msa0049020:intron | 35.0% |
| GTTCATATAACTGACTGCTT+AGG | + | chr1_2:2179572-2179591 | Msa0049020:intron | 35.0% | |
| GTTCATATAACTGACTGCTT+AGG | + | chr1_2:2179572-2179591 | Msa0049020:intron | 35.0% | |
| ATGGTTACACTTATTCACAC+TGG | + | chr1_2:2179941-2179960 | Msa0049020:CDS | 35.0% | |
| TGGTTACACTTATTCACACT+GGG | + | chr1_2:2179942-2179961 | Msa0049020:CDS | 35.0% | |
| ATACCAACCACACAACAAAT+AGG | + | chr1_2:2180092-2180111 | Msa0049020:intron | 35.0% | |
| TACCAACCACACAACAAATA+GGG | + | chr1_2:2180093-2180112 | Msa0049020:intron | 35.0% | |
| TTGTCAGTATTAATGGTGGT+GGG | - | chr1_2:2180309-2180328 | None:intergenic | 35.0% | |
| ATTGTCAGTATTAATGGTGG+TGG | - | chr1_2:2180310-2180329 | None:intergenic | 35.0% | |
| ATTCAATATTACATTCCGGG+TGG | + | chr1_2:2180487-2180506 | Msa0049020:intron | 35.0% | |
| ! | TAAATTTGAGTGTTGTGGAC+GGG | + | chr1_2:2180540-2180559 | Msa0049020:intron | 35.0% |
| TCAAATTCACCAACCAAGAT+TGG | + | chr1_2:2180605-2180624 | Msa0049020:intron | 35.0% | |
| CTACGAAATATTGCTTCTTC+AGG | + | chr1_2:2180779-2180798 | Msa0049020:intron | 35.0% | |
| ! | TTCAGGTAGCATTTGCTAAA+AGG | + | chr1_2:2180796-2180815 | Msa0049020:intron | 35.0% |
| ! | TCAGGTAGCATTTGCTAAAA+GGG | + | chr1_2:2180797-2180816 | Msa0049020:intron | 35.0% |
| !! | CATGAAGGTATGGAGTTTTA+GGG | - | chr1_2:2180914-2180933 | None:intergenic | 35.0% |
| TGCATACACTACTAACATTG+TGG | + | chr1_2:2180998-2181017 | Msa0049020:three_prime_UTR | 35.0% | |
| ! | CTTAACTATTGCTGGTTACA+AGG | - | chr1_2:2181079-2181098 | None:intergenic | 35.0% |
| TTGGAGATAGGGATTTGTAT+AGG | + | chr1_2:2181223-2181242 | Msa0049020:three_prime_UTR | 35.0% | |
| GGGATTTGTATAGGAAAAAC+TGG | + | chr1_2:2181232-2181251 | Msa0049020:three_prime_UTR | 35.0% | |
| ! | CACGCATATTCGGCTTATTT+TGG | - | chr1_2:2176099-2176118 | None:intergenic | 40.0% |
| CAAAATAAGCCGAATATGCG+TGG | + | chr1_2:2176097-2176116 | Msa0049020:five_prime_UTR | 40.0% | |
| GGAAGATGCTTACTTAAGTC+GGG | - | chr1_2:2176139-2176158 | None:intergenic | 40.0% | |
| ! | GTGGTTGATTTCAGTTGGTA+AGG | - | chr1_2:2176244-2176263 | None:intergenic | 40.0% |
| CTCTAACAGCAATGAAACAG+GGG | - | chr1_2:2176421-2176440 | None:intergenic | 40.0% | |
| ! | ACGTTGTACGTTTGGAATCA+AGG | - | chr1_2:2176807-2176826 | None:intergenic | 40.0% |
| TGATTCCAAACGTACAACGT+TGG | + | chr1_2:2176807-2176826 | Msa0049020:intron | 40.0% | |
| ACAGCTAAGCTAATACTGGA+AGG | + | chr1_2:2176923-2176942 | Msa0049020:intron | 40.0% | |
| CCAGATGCAATTCAACTTCT+GGG | - | chr1_2:2177168-2177187 | None:intergenic | 40.0% | |
| ACCAGATGCAATTCAACTTC+TGG | - | chr1_2:2177169-2177188 | None:intergenic | 40.0% | |
| AATCATAGTAGAGCCCTTGA+GGG | + | chr1_2:2177222-2177241 | Msa0049020:CDS | 40.0% | |
| GTCAAAGAAAACGGTGAATG+AGG | - | chr1_2:2177270-2177289 | None:intergenic | 40.0% | |
| ACAGAGAGTAATCAAAGTGG+AGG | + | chr1_2:2177288-2177307 | Msa0049020:CDS | 40.0% | |
| CCGTCTACAAGTAATGTAGT+CGG | - | chr1_2:2177467-2177486 | None:intergenic | 40.0% | |
| CCGACTACATTACTTGTAGA+CGG | + | chr1_2:2177464-2177483 | Msa0049020:intron | 40.0% | |
| CGACTACATTACTTGTAGAC+GGG | + | chr1_2:2177465-2177484 | Msa0049020:intron | 40.0% | |
| ACATTACTTGTAGACGGGTA+TGG | + | chr1_2:2177470-2177489 | Msa0049020:intron | 40.0% | |
| CAACTAGCACTACAATGGAT+AGG | - | chr1_2:2177520-2177539 | None:intergenic | 40.0% | |
| CATGACAACTAGCACTACAA+TGG | - | chr1_2:2177525-2177544 | None:intergenic | 40.0% | |
| CATTGTAGTGCTAGTTGTCA+TGG | + | chr1_2:2177523-2177542 | Msa0049020:CDS | 40.0% | |
| AGATGTTGATCACCTGATAC+GGG | - | chr1_2:2177640-2177659 | None:intergenic | 40.0% | |
| TTATCCAGGATTGACTACCT+AGG | - | chr1_2:2178137-2178156 | None:intergenic | 40.0% | |
| AGGTAGTCAATCCTGGATAA+AGG | + | chr1_2:2178137-2178156 | Msa0049020:intron | 40.0% | |
| AATACAGAGAGGGAATGGAA+AGG | + | chr1_2:2178498-2178517 | Msa0049020:intron | 40.0% | |
| ATACAGAGAGGGAATGGAAA+GGG | + | chr1_2:2178499-2178518 | Msa0049020:intron | 40.0% | |
| AACCCAAATTGCCCTTCAAA+CGG | + | chr1_2:2178552-2178571 | Msa0049020:intron | 40.0% | |
| AACCGTTTGAAGGGCAATTT+GGG | - | chr1_2:2178557-2178576 | None:intergenic | 40.0% | |
| GTGTTGTCAAATATCTGCCA+TGG | + | chr1_2:2178859-2178878 | Msa0049020:intron | 40.0% | |
| GGTTGTCAAAATATCTGCCA+TGG | - | chr1_2:2178879-2178898 | None:intergenic | 40.0% | |
| !! | ATTTTGACAACCTCTGTGAC+CGG | + | chr1_2:2178887-2178906 | Msa0049020:intron | 40.0% |
| !!! | AGCTTGAAATGGCGGTTTTT+TGG | + | chr1_2:2178954-2178973 | Msa0049020:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_2:2179055-2179074 | Msa0049020:intron | 40.0% |
| ATACCATGTCACGAATATCG+AGG | - | chr1_2:2179081-2179100 | None:intergenic | 40.0% | |
| GAATCCTATCTATCCGATGT+GGG | - | chr1_2:2179215-2179234 | None:intergenic | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | - | chr1_2:2179216-2179235 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_2:2179055-2179074 | Msa0049020:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_2:2179055-2179074 | Msa0049020:intron | 40.0% |
| ATATAGGGAAAAATGCAGGC+AGG | - | chr1_2:2179742-2179761 | None:intergenic | 40.0% | |
| ACTTATTCACACTGGGATGA+TGG | + | chr1_2:2179949-2179968 | Msa0049020:CDS | 40.0% | |
| !! | ACTTCTCCCTATTTGTTGTG+TGG | - | chr1_2:2180102-2180121 | None:intergenic | 40.0% |
| ACATGTGTAGGCATAAGAAG+TGG | + | chr1_2:2180195-2180214 | Msa0049020:intron | 40.0% | |
| ! | CTCATTTAAAGTGTGAGTCC+AGG | + | chr1_2:2180273-2180292 | Msa0049020:intron | 40.0% |
| ! | ATTTAAAGTGTGAGTCCAGG+AGG | + | chr1_2:2180276-2180295 | Msa0049020:intron | 40.0% |
| ! | TGTCAGTATTAATGGTGGTG+GGG | - | chr1_2:2180308-2180327 | None:intergenic | 40.0% |
| GATCTAAGTCTAATTCCACC+CGG | - | chr1_2:2180505-2180524 | None:intergenic | 40.0% | |
| GAAAGATCCAGACTTGAGAA+TGG | + | chr1_2:2180824-2180843 | Msa0049020:CDS | 40.0% | |
| !! | GCATGAAGGTATGGAGTTTT+AGG | - | chr1_2:2180915-2180934 | None:intergenic | 40.0% |
| ! | GTGTGGTGGTTGATTTCAGT+TGG | - | chr1_2:2176249-2176268 | None:intergenic | 45.0% |
| TACAGCACTCTTGAACCAAC+TGG | + | chr1_2:2177122-2177141 | Msa0049020:five_prime_UTR | 45.0% | |
| AATTTCTTGCTGGCACCAGT+TGG | - | chr1_2:2177140-2177159 | None:intergenic | 45.0% | |
| CCCAGAAGTTGAATTGCATC+TGG | + | chr1_2:2177165-2177184 | Msa0049020:five_prime_UTR | 45.0% | |
| GAATTGCATCTGGTCTAGTC+AGG | + | chr1_2:2177175-2177194 | Msa0049020:five_prime_UTR | 45.0% | |
| GAATCATAGTAGAGCCCTTG+AGG | + | chr1_2:2177221-2177240 | Msa0049020:CDS | 45.0% | |
| TGGAGGTCTTCATCCATCAA+CGG | + | chr1_2:2177305-2177324 | Msa0049020:CDS | 45.0% | |
| TATTGCTATGTCCCCGTATC+AGG | + | chr1_2:2177625-2177644 | Msa0049020:intron | 45.0% | |
| GATGTTGATCACCTGATACG+GGG | - | chr1_2:2177639-2177658 | None:intergenic | 45.0% | |
| ATTGTTCAAGAGGGAAGCTG+AGG | + | chr1_2:2177875-2177894 | Msa0049020:CDS | 45.0% | |
| AGAACCTAGGTAGTCAATCC+TGG | + | chr1_2:2178130-2178149 | Msa0049020:intron | 45.0% | |
| GTCAATCCTGGATAAAGGCT+TGG | + | chr1_2:2178142-2178161 | Msa0049020:intron | 45.0% | |
| !! | ATCCTGCTATCCCACTTTTG+GGG | - | chr1_2:2178177-2178196 | None:intergenic | 45.0% |
| !! | GATCCTGCTATCCCACTTTT+GGG | - | chr1_2:2178178-2178197 | None:intergenic | 45.0% |
| TGAAAACGGCGAATACAGAG+AGG | + | chr1_2:2178487-2178506 | Msa0049020:intron | 45.0% | |
| GAAAACGGCGAATACAGAGA+GGG | + | chr1_2:2178488-2178507 | Msa0049020:intron | 45.0% | |
| TACAGAGAGGGAATGGAAAG+GGG | + | chr1_2:2178500-2178519 | Msa0049020:intron | 45.0% | |
| ATGGAAAGGGGAAGAGAGAA+AGG | + | chr1_2:2178512-2178531 | Msa0049020:intron | 45.0% | |
| TGGAAAGGGGAAGAGAGAAA+GGG | + | chr1_2:2178513-2178532 | Msa0049020:intron | 45.0% | |
| GAACCGTTTGAAGGGCAATT+TGG | - | chr1_2:2178558-2178577 | None:intergenic | 45.0% | |
| ! | AATCGTGATTTTCCGAGAGC+CGG | + | chr1_2:2178592-2178611 | Msa0049020:intron | 45.0% |
| ATCTCAGTGAAAAACCGCAC+GGG | - | chr1_2:2178684-2178703 | None:intergenic | 45.0% | |
| CATCTCAGTGAAAAACCGCA+CGG | - | chr1_2:2178685-2178704 | None:intergenic | 45.0% | |
| GTTCTCTAGGTAGCCAATAC+CGG | - | chr1_2:2178729-2178748 | None:intergenic | 45.0% | |
| TGGCTACCTAGAGAACTATG+AGG | + | chr1_2:2178733-2178752 | Msa0049020:intron | 45.0% | |
| GGCTACCTAGAGAACTATGA+GGG | + | chr1_2:2178734-2178753 | Msa0049020:intron | 45.0% | |
| TTCTCCACACGTGTTACACT+TGG | + | chr1_2:2178837-2178856 | Msa0049020:intron | 45.0% | |
| AACACCAAGTGTAACACGTG+TGG | - | chr1_2:2178844-2178863 | None:intergenic | 45.0% | |
| !! | TGTGACCGGTTTTCTAAGGA+TGG | + | chr1_2:2178901-2178920 | Msa0049020:intron | 45.0% |
| CTCTGCCATCCTTAGAAAAC+CGG | - | chr1_2:2178909-2178928 | None:intergenic | 45.0% | |
| CATATCGGTCATATAACGCC+TGG | - | chr1_2:2178932-2178951 | None:intergenic | 45.0% | |
| CAGGCGTTATATGACCGATA+TGG | + | chr1_2:2178930-2178949 | Msa0049020:intron | 45.0% | |
| ACCGATATGGCAGCTTGAAA+TGG | + | chr1_2:2178943-2178962 | Msa0049020:intron | 45.0% | |
| GCCATTTCAAGCTGCCATAT+CGG | - | chr1_2:2178947-2178966 | None:intergenic | 45.0% | |
| GATATGGCAGCTTGAAATGG+CGG | + | chr1_2:2178946-2178965 | Msa0049020:intron | 45.0% | |
| CTATCTATAGAAGGGGACCA+TGG | - | chr1_2:2178987-2179006 | None:intergenic | 45.0% | |
| CATGGTCCCCTTCTATAGAT+AGG | + | chr1_2:2178985-2179004 | Msa0049020:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+CGG | - | chr1_2:2179048-2179067 | None:intergenic | 45.0% |
| GACATGGTATCAGAGCCTAT+CGG | + | chr1_2:2179091-2179110 | Msa0049020:intron | 45.0% | |
| ACATGGTATCAGAGCCTATC+GGG | + | chr1_2:2179092-2179111 | Msa0049020:intron | 45.0% | |
| GACTAAATCCCACTGAGTGT+TGG | - | chr1_2:2179193-2179212 | None:intergenic | 45.0% | |
| AGTGGGATTTAGTCCCACAT+CGG | + | chr1_2:2179199-2179218 | Msa0049020:intron | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | + | chr1_2:2179208-2179227 | Msa0049020:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+CGG | - | chr1_2:2179048-2179067 | None:intergenic | 45.0% |
| TGCAAGTGTCACGAATATCG+AGG | - | chr1_2:2179304-2179323 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+CGG | - | chr1_2:2179048-2179067 | None:intergenic | 45.0% |
| TGCAAGTGTCACGAATATCG+AGG | - | chr1_2:2179304-2179323 | None:intergenic | 45.0% | |
| TGAAAACCCGAAGTTGCTGA+TGG | + | chr1_2:2179883-2179902 | Msa0049020:CDS | 45.0% | |
| ! | TATTCACACTGGGATGATGG+AGG | + | chr1_2:2179952-2179971 | Msa0049020:CDS | 45.0% |
| !! | CTCCCTATTTGTTGTGTGGT+TGG | - | chr1_2:2180098-2180117 | None:intergenic | 45.0% |
| TGTTGTGGACGGGAAAAACA+AGG | + | chr1_2:2180550-2180569 | Msa0049020:intron | 45.0% | |
| TGGACGGGAAAAACAAGGTT+GGG | + | chr1_2:2180555-2180574 | Msa0049020:intron | 45.0% | |
| AGGGGAGACACCATTAAAAG+TGG | + | chr1_2:2180578-2180597 | Msa0049020:intron | 45.0% | |
| ATGAGATGGCCAATCTTGGT+TGG | - | chr1_2:2180617-2180636 | None:intergenic | 45.0% | |
| ! | ACCAAGATTGGCCATCTCAT+CGG | + | chr1_2:2180617-2180636 | Msa0049020:intron | 45.0% |
| CTACTCGAGAAGCTTATTGC+AGG | - | chr1_2:2180973-2180992 | None:intergenic | 45.0% | |
| !!! | ATATAATTTGTTATATTAAA+AGG | + | chr1_2:2176995-2177014 | Msa0049020:intron | 5.0% |
| !!! | GTTATTTAATTTTTATTTTT+TGG | + | chr1_2:2179597-2179616 | Msa0049020:intron | 5.0% |
| TGCAGCCAACGTTGTACGTT+TGG | - | chr1_2:2176815-2176834 | None:intergenic | 50.0% | |
| ! | TGGTGCCAGCAAGAAATTGC+TGG | + | chr1_2:2177142-2177161 | Msa0049020:five_prime_UTR | 50.0% |
| TCAGGCACATGAGTCAACAG+AGG | + | chr1_2:2177193-2177212 | Msa0049020:exon | 50.0% | |
| GGAGGTCTTCATCCATCAAC+GGG | + | chr1_2:2177306-2177325 | Msa0049020:CDS | 50.0% | |
| GTTGAAGTTCCACCCGTTGA+TGG | - | chr1_2:2177321-2177340 | None:intergenic | 50.0% | |
| TGGATAGGTCTCAAGCATGC+AGG | - | chr1_2:2177505-2177524 | None:intergenic | 50.0% | |
| GTCGCTGCAACCAATCTATC+CGG | + | chr1_2:2178096-2178115 | Msa0049020:intron | 50.0% | |
| CTATCCAGAGCCGGATAGAT+TGG | - | chr1_2:2178109-2178128 | None:intergenic | 50.0% | |
| !! | CAATCTATCCGGCTCTGGAT+AGG | + | chr1_2:2178107-2178126 | Msa0049020:intron | 50.0% |
| TAGGTTCTCCTATCCAGAGC+CGG | - | chr1_2:2178118-2178137 | None:intergenic | 50.0% | |
| !!! | TGCTATCCCACTTTTGGGGT+CGG | - | chr1_2:2178173-2178192 | None:intergenic | 50.0% |
| ! | GGATCCTGCTATCCCACTTT+TGG | - | chr1_2:2178179-2178198 | None:intergenic | 50.0% |
| AAAGTGGGATAGCAGGATCC+CGG | + | chr1_2:2178179-2178198 | Msa0049020:intron | 50.0% | |
| AGGGGAAGAGAGAAAGGGTT+AGG | + | chr1_2:2178518-2178537 | Msa0049020:intron | 50.0% | |
| GGGGAAGAGAGAAAGGGTTA+GGG | + | chr1_2:2178519-2178538 | Msa0049020:intron | 50.0% | |
| CCTTAGAAAACCGGTCACAG+AGG | - | chr1_2:2178900-2178919 | None:intergenic | 50.0% | |
| !! | CCTCTGTGACCGGTTTTCTA+AGG | + | chr1_2:2178897-2178916 | Msa0049020:intron | 50.0% |
| ! | TTTCTAAGGATGGCAGAGCC+AGG | + | chr1_2:2178911-2178930 | Msa0049020:intron | 50.0% |
| !!! | GGTTTTTTGGCTTTCCGCCA+TGG | + | chr1_2:2178967-2178986 | Msa0049020:intron | 50.0% |
| TCTATAGAAGGGGACCATGG+CGG | - | chr1_2:2178984-2179003 | None:intergenic | 50.0% | |
| !! | CCGTACAAGCCGGTTTTGTA+AGG | + | chr1_2:2179045-2179064 | Msa0049020:intron | 50.0% |
| AGGCCTCGATATTCGTGACA+TGG | + | chr1_2:2179075-2179094 | Msa0049020:intron | 50.0% | |
| AGCCTATCGGGTTCATCGTT+GGG | + | chr1_2:2179104-2179123 | Msa0049020:intron | 50.0% | |
| !! | CCGTACAAGCCGGTTTTGTA+AGG | + | chr1_2:2179045-2179064 | Msa0049020:intron | 50.0% |
| !! | CCGTACAAGCCGGTTTTGTA+AGG | + | chr1_2:2179045-2179064 | Msa0049020:intron | 50.0% |
| CCTTGACAGACACTGCAGTA+CGG | - | chr1_2:2179852-2179871 | None:intergenic | 50.0% | |
| CGTACTGCAGTGTCTGTCAA+GGG | + | chr1_2:2179850-2179869 | Msa0049020:intron | 50.0% | |
| AAACCCGAAGTTGCTGATGG+CGG | + | chr1_2:2179886-2179905 | Msa0049020:CDS | 50.0% | |
| GTGGACGGGAAAAACAAGGT+TGG | + | chr1_2:2180554-2180573 | Msa0049020:intron | 50.0% | |
| ACGGGAAAAACAAGGTTGGG+AGG | + | chr1_2:2180558-2180577 | Msa0049020:intron | 50.0% | |
| CGGGAAAAACAAGGTTGGGA+GGG | + | chr1_2:2180559-2180578 | Msa0049020:intron | 50.0% | |
| GGGAAAAACAAGGTTGGGAG+GGG | + | chr1_2:2180560-2180579 | Msa0049020:intron | 50.0% | |
| ACCGATGAGATGGCCAATCT+TGG | - | chr1_2:2180621-2180640 | None:intergenic | 50.0% | |
| GTGTGAGCCATTCTCAAGTC+TGG | - | chr1_2:2180834-2180853 | None:intergenic | 50.0% | |
| CTCCATACCTTCATGCTGCA+TGG | + | chr1_2:2180919-2180938 | Msa0049020:CDS | 50.0% | |
| TGCCATGCAGCATGAAGGTA+TGG | - | chr1_2:2180924-2180943 | None:intergenic | 50.0% | |
| CAAGATGCCATGCAGCATGA+AGG | - | chr1_2:2180929-2180948 | None:intergenic | 50.0% | |
| ! | GAAGTGAGATGAGGGTGTGG+TGG | - | chr1_2:2176263-2176282 | None:intergenic | 55.0% |
| GGAGAAGTGAGATGAGGGTG+TGG | - | chr1_2:2176266-2176285 | None:intergenic | 55.0% | |
| CTGGGCCAGCAATTTCTTGC+TGG | - | chr1_2:2177150-2177169 | None:intergenic | 55.0% | |
| AACCCCATGGACACCCTCAA+GGG | - | chr1_2:2177238-2177257 | None:intergenic | 55.0% | |
| GGTCTTCATCCATCAACGGG+TGG | + | chr1_2:2177309-2177328 | Msa0049020:CDS | 55.0% | |
| CTCTTGGAGTGAATGCCCCA+AGG | + | chr1_2:2177704-2177723 | Msa0049020:CDS | 55.0% | |
| GCAACCAATCTATCCGGCTC+TGG | + | chr1_2:2178102-2178121 | Msa0049020:intron | 55.0% | |
| !! | GGCTCTGGATAGGAGAACCT+AGG | + | chr1_2:2178117-2178136 | Msa0049020:intron | 55.0% |
| GTCGCTCCAAGCCTTTATCC+AGG | - | chr1_2:2178151-2178170 | None:intergenic | 55.0% | |
| GACCCCAAAAGTGGGATAGC+AGG | + | chr1_2:2178172-2178191 | Msa0049020:intron | 55.0% | |
| AAGTGGGATAGCAGGATCCC+GGG | + | chr1_2:2178180-2178199 | Msa0049020:intron | 55.0% | |
| TCTCTCCTCTCCTCTGTTCC+CGG | - | chr1_2:2178201-2178220 | None:intergenic | 55.0% | |
| CGGCGAATACAGAGAGGGAA+TGG | + | chr1_2:2178493-2178512 | Msa0049020:intron | 55.0% | |
| ACACTCCTCACCGTACAAGC+CGG | + | chr1_2:2179035-2179054 | Msa0049020:intron | 55.0% | |
| !! | CAAAACCGGCTTGTACGGTG+AGG | - | chr1_2:2179043-2179062 | None:intergenic | 55.0% |
| GAGCCTATCGGGTTCATCGT+TGG | + | chr1_2:2179103-2179122 | Msa0049020:intron | 55.0% | |
| AGCCCAACGATGAACCCGAT+AGG | - | chr1_2:2179109-2179128 | None:intergenic | 55.0% | |
| TGTTAGCGGCCAACACTCAG+TGG | + | chr1_2:2179181-2179200 | Msa0049020:intron | 55.0% | |
| GTTAGCGGCCAACACTCAGT+GGG | + | chr1_2:2179182-2179201 | Msa0049020:intron | 55.0% | |
| !! | CAAAACCGGCTTGTACGGTG+AGG | - | chr1_2:2179043-2179062 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTACGGTG+AGG | - | chr1_2:2179043-2179062 | None:intergenic | 55.0% |
| CCGTACTGCAGTGTCTGTCA+AGG | + | chr1_2:2179849-2179868 | Msa0049020:intron | 55.0% | |
| ATGCCGCCATCAGCAACTTC+GGG | - | chr1_2:2179892-2179911 | None:intergenic | 55.0% | |
| GATGCCGCCATCAGCAACTT+CGG | - | chr1_2:2179893-2179912 | None:intergenic | 55.0% | |
| TGGCATCTTGCTGCTGCTGT+TGG | + | chr1_2:2180939-2180958 | Msa0049020:CDS | 55.0% | |
| !! | AGAGCCCTTGAGGGTGTCCA+TGG | + | chr1_2:2177231-2177250 | Msa0049020:CDS | 60.0% |
| !! | GAGCCCTTGAGGGTGTCCAT+GGG | + | chr1_2:2177232-2177251 | Msa0049020:CDS | 60.0% |
| !! | AGCCCTTGAGGGTGTCCATG+GGG | + | chr1_2:2177233-2177252 | Msa0049020:CDS | 60.0% |
| GAACCCCATGGACACCCTCA+AGG | - | chr1_2:2177239-2177258 | None:intergenic | 60.0% | |
| GAGCGACCGACCCCAAAAGT+GGG | + | chr1_2:2178164-2178183 | Msa0049020:intron | 60.0% | |
| TAGCAGGATCCCGGGAACAG+AGG | + | chr1_2:2178188-2178207 | Msa0049020:intron | 60.0% | |
| CTCTCCTCTCCTCTGTTCCC+GGG | - | chr1_2:2178200-2178219 | None:intergenic | 60.0% | |
| TGGAAGATCGGGTTCCCGGT+GGG | - | chr1_2:2178620-2178639 | None:intergenic | 60.0% | |
| CAGGTGGAAGATCGGGTTCC+CGG | - | chr1_2:2178624-2178643 | None:intergenic | 60.0% | |
| AGCGCTCCAGGTGGAAGATC+GGG | - | chr1_2:2178631-2178650 | None:intergenic | 60.0% | |
| CAGCGCTCCAGGTGGAAGAT+CGG | - | chr1_2:2178632-2178651 | None:intergenic | 60.0% | |
| ! | GAGCGCTGCGAACCAGAAGT+GGG | + | chr1_2:2178644-2178663 | Msa0049020:intron | 60.0% |
| GCTGCGAACCAGAAGTGGGA+CGG | + | chr1_2:2178648-2178667 | Msa0049020:intron | 60.0% | |
| CTGCGAACCAGAAGTGGGAC+GGG | + | chr1_2:2178649-2178668 | Msa0049020:intron | 60.0% | |
| TGCGAATCCCGTCCCACTTC+TGG | - | chr1_2:2178659-2178678 | None:intergenic | 60.0% | |
| ACGGGATTCGCATTCCCGTG+CGG | + | chr1_2:2178667-2178686 | Msa0049020:intron | 60.0% | |
| ACTGAGATGCACCGCTCCTC+CGG | + | chr1_2:2178696-2178715 | Msa0049020:intron | 60.0% | |
| AGCCAATACCGGCGAGATCC+CGG | - | chr1_2:2178718-2178737 | None:intergenic | 60.0% | |
| GCTTCCATCGTCCACGCTTC+AGG | + | chr1_2:2179126-2179145 | Msa0049020:intron | 60.0% | |
| GTCCACGCTTCAGGCCCATT+GGG | + | chr1_2:2179135-2179154 | Msa0049020:intron | 60.0% | |
| ACGCTTTAGCCCGGCCCAAT+GGG | - | chr1_2:2179152-2179171 | None:intergenic | 60.0% | |
| ! | AGCGTGAGGGGGTGTGTTAG+CGG | + | chr1_2:2179167-2179186 | Msa0049020:intron | 60.0% |
| GCACTCCTCACCGTACAAGC+CGG | + | chr1_2:2179258-2179277 | Msa0049020:intron | 60.0% | |
| GCACTCCTCACCGTACAAGC+CGG | + | chr1_2:2179258-2179277 | Msa0049020:intron | 60.0% | |
| ! | GTGGTGGGGACAAATCCTCC+TGG | - | chr1_2:2180294-2180313 | None:intergenic | 60.0% |
| GGCCATCTCATCGGTGAAGC+CGG | + | chr1_2:2180626-2180645 | Msa0049020:intron | 60.0% | |
| !! | CACCGGCTTCACCGATGAGA+TGG | - | chr1_2:2180631-2180650 | None:intergenic | 60.0% |
| CTTGCTGCTGCTGTTGGCGT+AGG | + | chr1_2:2180945-2180964 | Msa0049020:CDS | 60.0% | |
| GGGTGTCCATGGGGTTCACG+TGG | + | chr1_2:2177242-2177261 | Msa0049020:CDS | 65.0% | |
| ! | GAGGCACCACGTGAACCCCA+TGG | - | chr1_2:2177251-2177270 | None:intergenic | 65.0% |
| GGAGCGACCGACCCCAAAAG+TGG | + | chr1_2:2178163-2178182 | Msa0049020:intron | 65.0% | |
| GGATCCCGGGAACAGAGGAG+AGG | + | chr1_2:2178193-2178212 | Msa0049020:intron | 65.0% | |
| GGAAGATCGGGTTCCCGGTG+GGG | - | chr1_2:2178619-2178638 | None:intergenic | 65.0% | |
| GTGGAAGATCGGGTTCCCGG+TGG | - | chr1_2:2178621-2178640 | None:intergenic | 65.0% | |
| CGGGAACCCGATCTTCCACC+TGG | + | chr1_2:2178622-2178641 | Msa0049020:intron | 65.0% | |
| !! | CTTCTGGTTCGCAGCGCTCC+AGG | - | chr1_2:2178643-2178662 | None:intergenic | 65.0% |
| !! | GGAGCGCTGCGAACCAGAAG+TGG | + | chr1_2:2178643-2178662 | Msa0049020:intron | 65.0% |
| CTGAGATGCACCGCTCCTCC+GGG | + | chr1_2:2178697-2178716 | Msa0049020:intron | 65.0% | |
| CAATACCGGCGAGATCCCGG+AGG | - | chr1_2:2178715-2178734 | None:intergenic | 65.0% | |
| CTCCGGGATCTCGCCGGTAT+TGG | + | chr1_2:2178713-2178732 | Msa0049020:intron | 65.0% | |
| TGGGCCTGAAGCGTGGACGA+TGG | - | chr1_2:2179133-2179152 | None:intergenic | 65.0% | |
| CGTCCACGCTTCAGGCCCAT+TGG | + | chr1_2:2179134-2179153 | Msa0049020:intron | 65.0% | |
| ACGCTTCAGGCCCATTGGGC+CGG | + | chr1_2:2179139-2179158 | Msa0049020:intron | 65.0% | |
| CACGCTTTAGCCCGGCCCAA+TGG | - | chr1_2:2179153-2179172 | None:intergenic | 65.0% | |
| TTGGGCCGGGCTAAAGCGTG+AGG | + | chr1_2:2179153-2179172 | Msa0049020:intron | 65.0% | |
| TGGGCCGGGCTAAAGCGTGA+GGG | + | chr1_2:2179154-2179173 | Msa0049020:intron | 65.0% | |
| CACCCCCTCACGCTTTAGCC+CGG | - | chr1_2:2179161-2179180 | None:intergenic | 65.0% | |
| TTCCGAGAGCCGGACCCCAC+CGG | + | chr1_2:2178602-2178621 | Msa0049020:intron | 70.0% | |
| ATCGGGTTCCCGGTGGGGTC+CGG | - | chr1_2:2178614-2178633 | None:intergenic | 70.0% | |
| ! | CTGGTTCGCAGCGCTCCAGG+TGG | - | chr1_2:2178640-2178659 | None:intergenic | 70.0% |
| GGCCCAATGGGCCTGAAGCG+TGG | - | chr1_2:2179140-2179159 | None:intergenic | 70.0% | |
| CGCTTCAGGCCCATTGGGCC+GGG | + | chr1_2:2179140-2179159 | Msa0049020:intron | 70.0% | |
| GGGCCGGGCTAAAGCGTGAG+GGG | + | chr1_2:2179155-2179174 | Msa0049020:intron | 70.0% | |
| GGCCGGGCTAAAGCGTGAGG+GGG | + | chr1_2:2179156-2179175 | Msa0049020:intron | 70.0% | |
| TCCGAGAGCCGGACCCCACC+GGG | + | chr1_2:2178603-2178622 | Msa0049020:intron | 75.0% | |
| TCCCGGTGGGGTCCGGCTCT+CGG | - | chr1_2:2178607-2178626 | None:intergenic | 75.0% | |
| CCGGCGAGATCCCGGAGGAG+CGG | - | chr1_2:2178710-2178729 | None:intergenic | 75.0% | |
| CCGCTCCTCCGGGATCTCGC+CGG | + | chr1_2:2178707-2178726 | Msa0049020:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 2176055 | 2181308 | 2176055 | ID=Msa0049020;Name=Msa0049020 |
| chr1_2 | mRNA | 2176055 | 2181308 | 2176055 | ID=Msa0049020-mRNA-1;Parent=Msa0049020;Name=Msa0049020-mRNA-1;_AED=0.19;_eAED=0.19;_QI=185|1|1|1|0.83|0.71|7|316|251 |
| chr1_2 | exon | 2176055 | 2176145 | 2176055 | ID=Msa0049020-mRNA-1:exon:416;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2177107 | 2177370 | 2177107 | ID=Msa0049020-mRNA-1:exon:417;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2177483 | 2177544 | 2177483 | ID=Msa0049020-mRNA-1:exon:418;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2177647 | 2177725 | 2177647 | ID=Msa0049020-mRNA-1:exon:419;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2177807 | 2177945 | 2177807 | ID=Msa0049020-mRNA-1:exon:420;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2179860 | 2179973 | 2179860 | ID=Msa0049020-mRNA-1:exon:421;Parent=Msa0049020-mRNA-1 |
| chr1_2 | exon | 2180801 | 2181308 | 2180801 | ID=Msa0049020-mRNA-1:exon:422;Parent=Msa0049020-mRNA-1 |
| chr1_2 | five_prime_UTR | 2176055 | 2176145 | 2176055 | ID=Msa0049020-mRNA-1:five_prime_utr;Parent=Msa0049020-mRNA-1 |
| chr1_2 | five_prime_UTR | 2177107 | 2177200 | 2177107 | ID=Msa0049020-mRNA-1:five_prime_utr;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2177201 | 2177370 | 2177201 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2177483 | 2177544 | 2177483 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2177647 | 2177725 | 2177647 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2177807 | 2177945 | 2177807 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2179860 | 2179973 | 2179860 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | CDS | 2180801 | 2180992 | 2180801 | ID=Msa0049020-mRNA-1:cds;Parent=Msa0049020-mRNA-1 |
| chr1_2 | three_prime_UTR | 2180993 | 2181308 | 2180993 | ID=Msa0049020-mRNA-1:three_prime_utr;Parent=Msa0049020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
