AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0052930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052930 MtrunA17_Chr1g0151841 96.552 377 12 1 1 376 1 377 0.0 759
Msa0052930 MtrunA17_Chr8g0341461 68.155 336 103 2 35 369 75 407 3.39e-177 499
Msa0052930 MtrunA17_Chr1g0209531 56.190 315 134 4 63 376 82 393 8.67e-133 386
Msa0052930 MtrunA17_Chr2g0276861 58.086 303 125 2 75 376 137 438 1.02e-131 384
Msa0052930 MtrunA17_Chr5g0423131 49.856 347 166 3 26 366 37 381 1.66e-126 369
Msa0052930 MtrunA17_Chr6g0484141 52.532 316 148 2 52 366 96 410 3.95e-124 364
Msa0052930 MtrunA17_Chr5g0394961 54.485 301 135 2 67 366 113 412 1.45e-121 358
Msa0052930 MtrunA17_Chr3g0136091 49.834 301 131 4 67 366 103 384 2.33e-105 315
Msa0052930 MtrunA17_Chr4g0073871 57.353 204 87 0 163 366 9 212 5.38e-89 267
Msa0052930 MtrunA17_Chr5g0394981 55.882 204 90 0 163 366 2 205 6.05e-85 257
Msa0052930 MtrunA17_Chr3g0138871 39.692 325 170 5 75 376 60 381 1.97e-79 248
Msa0052930 MtrunA17_Chr1g0148241 38.356 365 196 7 25 366 32 390 1.02e-76 242
Msa0052930 MtrunA17_Chr4g0071911 41.479 311 157 6 83 371 83 390 5.38e-75 238
Msa0052930 MtrunA17_Chr2g0298501 42.361 288 141 5 106 371 105 389 2.35e-72 231
Msa0052930 MtrunA17_Chr2g0298511 41.115 287 145 4 106 371 97 380 1.51e-71 228
Msa0052930 MtrunA17_Chr8g0384601 37.377 305 146 8 106 368 55 356 1.06e-55 186
Msa0052930 MtrunA17_Chr2g0289021 38.170 317 152 10 91 366 46 359 7.48e-55 184
Msa0052930 MtrunA17_Chr1g0170231 34.828 290 159 7 106 374 63 343 3.41e-47 164
Msa0052930 MtrunA17_Chr3g0137661 34.520 281 171 7 107 374 95 375 1.68e-40 147
Msa0052930 MtrunA17_Chr1g0170151 35.211 284 154 9 106 369 64 337 9.38e-38 139
Msa0052930 MtrunA17_Chr2g0322161 33.667 300 156 11 107 374 78 366 1.60e-36 136
Msa0052930 MtrunA17_Chr5g0394971 57.471 87 36 1 79 164 1 87 1.63e-30 112
Msa0052930 MtrunA17_Chr4g0073881 51.000 100 47 2 67 165 112 210 1.70e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052930 AT5G11730.1 67.183 387 115 3 1 376 1 386 0.0 535
Msa0052930 AT5G25970.1 64.987 377 121 1 3 368 4 380 3.20e-180 506
Msa0052930 AT5G25970.2 64.987 377 121 1 3 368 4 380 3.20e-180 506
Msa0052930 AT5G25970.3 64.987 377 121 1 3 368 4 380 3.20e-180 506
Msa0052930 AT3G21310.1 62.974 343 121 3 35 376 46 383 3.57e-161 457
Msa0052930 AT3G21310.3 62.974 343 121 3 35 376 46 383 3.57e-161 457
Msa0052930 AT1G51770.1 59.827 346 131 3 35 376 51 392 6.04e-157 447
Msa0052930 AT1G51770.2 55.043 347 121 4 34 376 50 365 3.95e-138 399
Msa0052930 AT1G10280.1 56.113 319 137 3 59 376 96 412 5.10e-132 384
Msa0052930 AT1G68390.1 54.487 312 139 2 67 376 98 408 1.83e-127 372
Msa0052930 AT5G16170.1 53.094 307 126 2 78 366 94 400 1.02e-117 348
Msa0052930 AT1G10880.1 53.103 290 131 2 81 368 93 379 4.86e-117 345
Msa0052930 AT1G68380.1 47.324 355 171 8 26 370 39 387 2.68e-108 323
Msa0052930 AT1G73810.1 50.492 305 145 3 70 371 113 414 7.56e-107 320
Msa0052930 AT3G21310.2 61.905 210 75 2 35 243 46 251 5.41e-90 272
Msa0052930 AT4G31350.4 43.878 294 139 5 96 366 76 366 6.28e-80 250
Msa0052930 AT4G31350.1 43.878 294 139 5 96 366 76 366 6.28e-80 250
Msa0052930 AT4G31350.2 43.878 294 139 5 96 366 76 366 6.28e-80 250
Msa0052930 AT4G30060.2 37.466 371 195 9 24 371 36 392 8.29e-76 240
Msa0052930 AT4G30060.1 37.466 371 195 9 24 371 36 392 8.29e-76 240
Msa0052930 AT4G31350.3 43.197 294 136 6 96 366 76 361 8.90e-76 239
Msa0052930 AT2G19160.2 37.634 372 187 13 24 368 33 386 1.72e-73 234
Msa0052930 AT2G19160.1 37.634 372 187 13 24 368 33 386 1.72e-73 234
Msa0052930 AT4G25870.1 38.854 314 165 6 79 368 70 380 2.75e-72 231
Msa0052930 AT5G57270.3 36.000 375 208 9 17 368 14 379 2.27e-70 226
Msa0052930 AT5G57270.1 36.000 375 208 9 17 368 14 379 2.27e-70 226
Msa0052930 AT5G57270.4 36.000 375 208 9 17 368 14 379 2.27e-70 226
Msa0052930 AT5G57270.5 36.000 375 208 9 17 368 14 379 2.27e-70 226
Msa0052930 AT5G57270.2 36.000 375 208 9 17 368 14 379 2.27e-70 226
Msa0052930 AT5G14550.2 41.270 252 126 6 103 335 61 309 3.35e-58 193
Msa0052930 AT5G14550.3 37.658 316 152 8 97 370 55 367 8.64e-58 192
Msa0052930 AT5G14550.1 37.342 316 152 9 97 369 55 367 1.55e-57 192
Msa0052930 AT5G25330.1 35.054 368 213 13 24 375 4 361 3.62e-50 172
Msa0052930 AT1G62305.1 36.190 315 155 10 92 366 56 364 1.15e-49 171
Msa0052930 AT1G11940.1 36.149 296 146 8 106 361 73 365 4.59e-49 170
Msa0052930 AT3G52060.1 34.409 279 163 8 106 373 74 343 4.65e-48 166
Msa0052930 AT5G14550.4 36.486 296 156 8 97 370 55 340 9.01e-47 163
Msa0052930 AT1G62305.3 41.304 230 107 7 92 299 56 279 4.08e-45 158
Msa0052930 AT1G11940.2 43.258 178 94 4 106 279 73 247 3.68e-40 143
Msa0052930 AT5G22070.1 33.445 299 159 9 107 374 71 360 2.61e-39 144
Msa0052930 AT4G32290.1 33.242 364 208 11 31 375 31 378 3.35e-37 138
Msa0052930 AT1G62305.2 32.381 315 143 11 92 366 56 340 2.52e-35 133

Find 111 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTACAAATGAGCTTAT+TGG 0.154481 1_2:+7301849 Msa0052930:three_prime_UTR
ATAAAATGGCGTTAAATTTA+TGG 0.158413 1_2:-7295448 None:intergenic
GATCAAATATTTAATGTAAA+TGG 0.200317 1_2:-7295483 None:intergenic
TGCACCGACGAAGCTGAATT+TGG 0.205834 1_2:-7301187 None:intergenic
TATGAAAGATCAAATTATTA+AGG 0.209862 1_2:-7295515 None:intergenic
GTTCTTTATCACTCATATTA+TGG 0.210415 1_2:-7295896 None:intergenic
CATTGCCTCTTGCACCTGTT+TGG 0.243558 1_2:+7296009 Msa0052930:CDS
ACTTCTTTGGAGAGCTTCTT+TGG 0.250935 1_2:+7295917 Msa0052930:CDS
AAAGGGTAATTCTTAATCTT+AGG 0.260696 1_2:-7295942 None:intergenic
GTATACACAATTAAGCATTT+TGG 0.282389 1_2:+7295774 Msa0052930:CDS
TGAGTGATAAAGAACTTCTT+TGG 0.293369 1_2:+7295904 Msa0052930:CDS
ATTGCCTCTTGCACCTGTTT+GGG 0.296741 1_2:+7296010 Msa0052930:CDS
GGAGTAATAAATGCATAAAA+TGG 0.319411 1_2:-7295462 None:intergenic
ATGGTAACCACCCTCTATTA+AGG 0.319959 1_2:-7295540 None:intergenic
TAGAGTTTCTATTGTTATAC+AGG 0.336336 1_2:-7301563 None:intergenic
CTTGGAACCTTTGTTAGATA+TGG 0.338936 1_2:+7301626 Msa0052930:CDS
TTGACTAGAGGGGCCATGTT+TGG 0.342155 1_2:-7301249 None:intergenic
AGGAACATAAAAGCAATCTT+AGG 0.357395 1_2:-7295975 None:intergenic
TGACTAGAGGGGCCATGTTT+GGG 0.361044 1_2:-7301248 None:intergenic
ATGCGGTGTCTTCCACAATA+TGG 0.362225 1_2:-7301329 None:intergenic
CTCTAGTCAACGTTACAAAA+TGG 0.364473 1_2:+7301262 Msa0052930:CDS
AGAATGAATGAAACTTTATA+TGG 0.376699 1_2:-7295559 None:intergenic
CGTTGAAGAACGTGCTGGTT+TGG 0.378429 1_2:+7295842 Msa0052930:CDS
ATGAAAGATCAAATTATTAA+GGG 0.384476 1_2:-7295514 None:intergenic
TGGCATGGTGATTGCCTCAT+TGG 0.392310 1_2:+7301765 Msa0052930:three_prime_UTR
ATCTTAGGAACTCTTTCAAA+AGG 0.395819 1_2:-7295960 None:intergenic
CTACAGTATTGTTCGAACTT+AGG 0.401155 1_2:-7301357 None:intergenic
ATTAGCAAGTAGTCTTCTTT+CGG 0.401766 1_2:-7301067 None:intergenic
GTCGGTGCATTTGATGATCC+TGG 0.408642 1_2:+7301201 Msa0052930:CDS
CTCTTGCACCTGTTTGGGAG+AGG 0.412242 1_2:+7296015 Msa0052930:CDS
CAACACACTCCCCGCTTGAA+TGG 0.413577 1_2:-7301424 None:intergenic
TCTTGTTCAGATTGCTGAGT+GGG 0.414497 1_2:+7301023 Msa0052930:intron
GGGTGGATTGGTCTAGAGGT+GGG 0.417834 1_2:+7301466 Msa0052930:CDS
CAAGATGCAATCGAGGGCTT+TGG 0.417995 1_2:+7295656 Msa0052930:exon
GGCGTTAAATTTATGGTCTA+CGG 0.420625 1_2:-7295441 None:intergenic
GGGGCCCATCCAGCTACATT+TGG 0.423319 1_2:+7301486 Msa0052930:CDS
CAATAGAATAAAACGCTCAT+TGG 0.425390 1_2:-7301106 None:intergenic
TTCAGAAACCTCTCCCAAAC+AGG 0.428489 1_2:-7296023 None:intergenic
CGGGGAGTGTGTTGGCAAAT+CGG 0.432852 1_2:+7301433 Msa0052930:CDS
TGGCAAATCGGAGCATAACT+TGG 0.433668 1_2:+7301445 Msa0052930:CDS
CACTACAATAAAACAAGCTA+TGG 0.438371 1_2:-7295395 None:intergenic
TCTGAAGAAGGAAAATCAAA+AGG 0.438585 1_2:+7295681 Msa0052930:CDS
TGGTAACCACCCTCTATTAA+GGG 0.441814 1_2:-7295539 None:intergenic
ATCGAAGTTGTAGACTATGC+TGG 0.455602 1_2:-7295367 None:intergenic
CAAAATATACATACCTGACT+AGG 0.457704 1_2:-7296140 None:intergenic
AACAGATGAAGGAGGAAACT+TGG 0.460141 1_2:-7296099 None:intergenic
GGTTGGGGAGAACAAGATTA+TGG 0.462623 1_2:-7295324 None:intergenic
AAAATTTGCTCCTAGTGCCT+TGG 0.467657 1_2:+7301608 Msa0052930:CDS
GGAAACTTGGCTTGATAAGA+AGG 0.470311 1_2:-7296086 None:intergenic
TAAGAGACAAATCCCTAGTC+AGG 0.472658 1_2:+7296127 Msa0052930:CDS
GGAGCATAACTTGGGTGGAT+TGG 0.479204 1_2:+7301454 Msa0052930:CDS
GCTTGAATGGTTAACATGGT+TGG 0.484426 1_2:-7301411 None:intergenic
AACGTGCTGGTTTGGAACAA+TGG 0.490018 1_2:+7295850 Msa0052930:CDS
TCTTTCATAACCCTTAATAG+AGG 0.493403 1_2:+7295529 Msa0052930:five_prime_UTR
TTGGCTTGATAAGAAGGAGT+TGG 0.500843 1_2:-7296080 None:intergenic
CGTCCTCTTCCGTATGGACC+AGG 0.503162 1_2:-7301219 None:intergenic
TTTGGGAGAGGTTTCTGAAA+GGG 0.509717 1_2:+7296027 Msa0052930:CDS
GTAGAGAGGGATACATGATT+CGG 0.512493 1_2:-7301130 None:intergenic
GAGGCAATGGTCCTTTAGTA+AGG 0.515491 1_2:-7295995 None:intergenic
CTAGACTGAATTTGTAGAGA+GGG 0.522832 1_2:-7301143 None:intergenic
ATATTATGGATCAGATTTGA+AGG 0.522939 1_2:-7295882 None:intergenic
TGGGTGGATTGGTCTAGAGG+TGG 0.535618 1_2:+7301465 Msa0052930:CDS
TTGTAGCGTCCTCTTCCGTA+TGG 0.537017 1_2:-7301225 None:intergenic
TCTTAGGAACTCTTTCAAAA+GGG 0.537953 1_2:-7295959 None:intergenic
TTCAGATTGCTGAGTGGGGA+AGG 0.538958 1_2:+7301028 Msa0052930:intron
CTCTCCCAAACAGGTGCAAG+AGG 0.544373 1_2:-7296014 None:intergenic
CTCAAAAGTTATGAAAATTG+AGG 0.546705 1_2:-7301818 None:intergenic
AACGTTACAAAATGGCGTAA+AGG 0.547258 1_2:+7301270 Msa0052930:CDS
TCGAAGTTGTAGACTATGCT+GGG 0.549060 1_2:-7295366 None:intergenic
ACCATGTTAACCATTCAAGC+GGG 0.549181 1_2:+7301414 Msa0052930:CDS
CATATCTAACAAAGGTTCCA+AGG 0.551048 1_2:-7301625 None:intergenic
CTGAAGAAGGAAAATCAAAA+GGG 0.552666 1_2:+7295682 Msa0052930:CDS
CAAGCTTGCCGTCCATATTG+TGG 0.554887 1_2:+7301317 Msa0052930:CDS
CTTGTTCAGATTGCTGAGTG+GGG 0.555008 1_2:+7301024 Msa0052930:intron
AGGGCTTTGGCATCTGAAGA+AGG 0.556245 1_2:+7295669 Msa0052930:CDS
TTTGATGATCCTGGTCCATA+CGG 0.557830 1_2:+7301210 Msa0052930:CDS
GATCCTGGTCCATACGGAAG+AGG 0.560466 1_2:+7301216 Msa0052930:CDS
AAATCCAAATTCAGCTTCGT+CGG 0.569207 1_2:+7301183 Msa0052930:CDS
ATGGTGATTGCCTCATTGGA+TGG 0.570076 1_2:+7301769 Msa0052930:three_prime_UTR
GGTGGATTGGTCTAGAGGTG+GGG 0.570596 1_2:+7301467 Msa0052930:CDS
AATGGCGTAAAGGCTCTCAA+TGG 0.571190 1_2:+7301280 Msa0052930:CDS
CAAACAGGTGCAAGAGGCAA+TGG 0.572308 1_2:-7296008 None:intergenic
CATTCAAGCGGGGAGTGTGT+TGG 0.572448 1_2:+7301425 Msa0052930:CDS
ACTTGGGTGGATTGGTCTAG+AGG 0.573299 1_2:+7301462 Msa0052930:CDS
CCCCGCTTGAATGGTTAACA+TGG 0.575864 1_2:-7301415 None:intergenic
CTTTCATAACCCTTAATAGA+GGG 0.580391 1_2:+7295530 Msa0052930:five_prime_UTR
CCAGCACGTTCTTCAACGCA+TGG 0.586978 1_2:-7295837 None:intergenic
AACCATGTTAACCATTCAAG+CGG 0.590819 1_2:+7301413 Msa0052930:CDS
CCATGCGTTGAAGAACGTGC+TGG 0.593014 1_2:+7295837 Msa0052930:CDS
AAAATATACATACCTGACTA+GGG 0.593555 1_2:-7296139 None:intergenic
GAATTCACCATATCTAACAA+AGG 0.595366 1_2:-7301633 None:intergenic
GTTTGGGAGAGGTTTCTGAA+AGG 0.596050 1_2:+7296026 Msa0052930:CDS
TTCTTGTTCAGATTGCTGAG+TGG 0.597688 1_2:+7301022 Msa0052930:intron
GTTCGAACAATACTGTAGAC+CGG 0.597734 1_2:+7301362 Msa0052930:CDS
TCATAACCCTTAATAGAGGG+TGG 0.597941 1_2:+7295533 Msa0052930:five_prime_UTR
GGCAAATCGGAGCATAACTT+GGG 0.604748 1_2:+7301446 Msa0052930:CDS
AACAAAGGTTCCAAGGCACT+AGG 0.605399 1_2:-7301618 None:intergenic
TTTAAGCAAGATGCAATCGA+GGG 0.613015 1_2:+7295650 Msa0052930:exon
AAAACACAACACATAGTGCA+AGG 0.624692 1_2:-7295740 None:intergenic
GAGAACAAGATTATGGCACA+TGG 0.629394 1_2:-7295317 None:intergenic
AGGACGCTACAACCCAAACA+TGG 0.648045 1_2:+7301236 Msa0052930:CDS
TGCTCGTCGACATAACAAGC+CGG 0.649367 1_2:-7301381 None:intergenic
TTCGAACTTAGGATAAAATG+CGG 0.652612 1_2:-7301346 None:intergenic
ACTAGACTGAATTTGTAGAG+AGG 0.654314 1_2:-7301144 None:intergenic
AAATCGGAGCATAACTTGGG+TGG 0.655678 1_2:+7301449 Msa0052930:CDS
GGATGGTGAATGCTAGATGA+TGG 0.659665 1_2:+7301786 Msa0052930:three_prime_UTR
TTATGGATCAGATTTGAAGG+AGG 0.663245 1_2:-7295879 None:intergenic
GGTGTCTTCCACAATATGGA+CGG 0.663514 1_2:-7301325 None:intergenic
CTAGCATTCACCATCCAATG+AGG 0.673494 1_2:-7301779 None:intergenic
AGAACAAGATTATGGCACAT+GGG 0.685703 1_2:-7295316 None:intergenic
CCATGTTAACCATTCAAGCG+GGG 0.708045 1_2:+7301415 Msa0052930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAGAAATTTTATTATA+TGG + chr1_2:7301740-7301759 Msa0052930:three_prime_UTR 10.0%
!! GATCAAATATTTAATGTAAA+TGG - chr1_2:7295486-7295505 None:intergenic 15.0%
!! ATGAAAGATCAAATTATTAA+GGG - chr1_2:7295517-7295536 None:intergenic 15.0%
!! TATGAAAGATCAAATTATTA+AGG - chr1_2:7295518-7295537 None:intergenic 15.0%
!!! AGATAATTTTTGTTTATTTG+AGG + chr1_2:7295625-7295644 Msa0052930:five_prime_UTR 15.0%
!! AGAAGTTAATAATGTTTAAT+TGG + chr1_2:7296215-7296234 Msa0052930:intron 15.0%
!! ATAAATAAATACATATCACT+TGG + chr1_2:7297391-7297410 Msa0052930:intron 15.0%
!!! CTTTAATAATTTAAGGTTTT+AGG - chr1_2:7297432-7297451 None:intergenic 15.0%
!! CTAAAACCTTAAATTATTAA+AGG + chr1_2:7297430-7297449 Msa0052930:intron 15.0%
!!! AATTAGTTTTACAAGTTTAT+AGG + chr1_2:7298131-7298150 Msa0052930:intron 15.0%
!!! ATTAGTTTTACAAGTTTATA+GGG + chr1_2:7298132-7298151 Msa0052930:intron 15.0%
!! TCATAAAAACTTACTATTTA+AGG + chr1_2:7298972-7298991 Msa0052930:intron 15.0%
!!! ATTTTTTTTTGAAGAAAAAC+TGG - chr1_2:7300481-7300500 None:intergenic 15.0%
!! ATAAAATGGCGTTAAATTTA+TGG - chr1_2:7295451-7295470 None:intergenic 20.0%
!! AGAATGAATGAAACTTTATA+TGG - chr1_2:7295562-7295581 None:intergenic 20.0%
!!! AGGTTTTGATGAATTTTTTT+GGG + chr1_2:7296312-7296331 Msa0052930:intron 20.0%
!! TATATAGTATTGTCAAATAG+CGG - chr1_2:7296510-7296529 None:intergenic 20.0%
!!! AAAACATTTAGGTTTATGTA+AGG + chr1_2:7296687-7296706 Msa0052930:intron 20.0%
!!! AAACATTTAGGTTTATGTAA+GGG + chr1_2:7296688-7296707 Msa0052930:intron 20.0%
!! TTATGCAAAGTTATATTGTA+AGG + chr1_2:7296928-7296947 Msa0052930:intron 20.0%
!! TATGCAAAGTTATATTGTAA+GGG + chr1_2:7296929-7296948 Msa0052930:intron 20.0%
!! TATTAATAGCTTAAGCATAT+AGG - chr1_2:7297262-7297281 None:intergenic 20.0%
!! ATGCTTAAGCTATTAATATA+CGG + chr1_2:7297264-7297283 Msa0052930:intron 20.0%
!! ACTTAATTTATCATTTGATG+CGG - chr1_2:7297346-7297365 None:intergenic 20.0%
!!! AAATTAAGTTGTGAAGAATA+AGG + chr1_2:7297357-7297376 Msa0052930:intron 20.0%
!!! AATTAAGTTGTGAAGAATAA+GGG + chr1_2:7297358-7297377 Msa0052930:intron 20.0%
!! TTCATGCCTTTAATAATTTA+AGG - chr1_2:7297439-7297458 None:intergenic 20.0%
!!! CTTTAACAATTTAAGCTTTT+AGG - chr1_2:7298105-7298124 None:intergenic 20.0%
!! CTAAAAGCTTAAATTGTTAA+AGG + chr1_2:7298103-7298122 Msa0052930:intron 20.0%
!!! TCTAGCTTAAAATATCATTT+AGG + chr1_2:7298665-7298684 Msa0052930:intron 20.0%
!! CTAGCTTAAAATATCATTTA+GGG + chr1_2:7298666-7298685 Msa0052930:intron 20.0%
!! AATACTAAAACATTGTCATT+TGG + chr1_2:7298697-7298716 Msa0052930:intron 20.0%
!! AATACTAAAACATTGTCATT+TGG + chr1_2:7298697-7298716 Msa0052930:intron 20.0%
!!! TGATAGTCGTTTATTTTTAT+AGG + chr1_2:7300881-7300900 Msa0052930:intron 20.0%
!!! AGAAATTTTATTATATGGCA+TGG + chr1_2:7301745-7301764 Msa0052930:three_prime_UTR 20.0%
! GGAGTAATAAATGCATAAAA+TGG - chr1_2:7295465-7295484 None:intergenic 25.0%
!! GTATACACAATTAAGCATTT+TGG + chr1_2:7295774-7295793 Msa0052930:CDS 25.0%
! ATATTATGGATCAGATTTGA+AGG - chr1_2:7295885-7295904 None:intergenic 25.0%
! GTTCTTTATCACTCATATTA+TGG - chr1_2:7295899-7295918 None:intergenic 25.0%
! AAAGGGTAATTCTTAATCTT+AGG - chr1_2:7295945-7295964 None:intergenic 25.0%
! TTATAAAAAACAGATGAAGG+AGG - chr1_2:7296110-7296129 None:intergenic 25.0%
! CTCTTATAAAAAACAGATGA+AGG - chr1_2:7296113-7296132 None:intergenic 25.0%
! AAAATATACATACCTGACTA+GGG - chr1_2:7296142-7296161 None:intergenic 25.0%
!!! GAGGTTTTGATGAATTTTTT+TGG + chr1_2:7296311-7296330 Msa0052930:intron 25.0%
!!! TTTTTTTGGGTTATAGATTG+TGG + chr1_2:7296325-7296344 Msa0052930:intron 25.0%
!! TGAGAATATAACATGCTTTT+GGG + chr1_2:7296787-7296806 Msa0052930:intron 25.0%
! TACGCAGAAAATGATAAAAA+GGG - chr1_2:7296904-7296923 None:intergenic 25.0%
! TTACGCAGAAAATGATAAAA+AGG - chr1_2:7296905-7296924 None:intergenic 25.0%
!!! ATTTACTTTTACTGCATGTT+CGG + chr1_2:7297142-7297161 Msa0052930:intron 25.0%
! AACTCGTTGTGATTAAATTA+CGG + chr1_2:7297215-7297234 Msa0052930:intron 25.0%
!! AAGGCATGAAATTAGTTTAA+AGG + chr1_2:7297449-7297468 Msa0052930:intron 25.0%
!! AGGCATGAAATTAGTTTAAA+GGG + chr1_2:7297450-7297469 Msa0052930:intron 25.0%
! AACGAGATATCAGAAATATT+AGG - chr1_2:7297504-7297523 None:intergenic 25.0%
!!! ATTGACTTTTGTGAAATGTT+AGG - chr1_2:7297546-7297565 None:intergenic 25.0%
! ATTAGAATTCTAACAGAATC+TGG + chr1_2:7297652-7297671 Msa0052930:intron 25.0%
! ACTTAATAGCTTAAGTTTAG+AGG - chr1_2:7297735-7297754 None:intergenic 25.0%
! AAACTTAAGCTATTAAGTGA+AGG + chr1_2:7297737-7297756 Msa0052930:intron 25.0%
! ATATTAACCTGTGAAGAATA+AGG + chr1_2:7297829-7297848 Msa0052930:intron 25.0%
! AGATATCTGGATATATATTG+TGG - chr1_2:7298173-7298192 None:intergenic 25.0%
! AATCACTTTAACAAGATATC+TGG - chr1_2:7298186-7298205 None:intergenic 25.0%
! ATTTACATATGTGGAATCTT+AGG - chr1_2:7298219-7298238 None:intergenic 25.0%
!! TCTCCATATTTTATCTCAAT+GGG - chr1_2:7298372-7298391 None:intergenic 25.0%
!! TTCTCCATATTTTATCTCAA+TGG - chr1_2:7298373-7298392 None:intergenic 25.0%
!! ATTAGAGTTCTAACAGAATT+TGG + chr1_2:7298531-7298550 Msa0052930:intron 25.0%
! AATCACTTTAACAAGATATC+TGG - chr1_2:7298186-7298205 None:intergenic 25.0%
! ATTTACATATGTGGAATCTT+AGG - chr1_2:7298219-7298238 None:intergenic 25.0%
! ATTTCCCATTGAGATAAATA+TGG + chr1_2:7299028-7299047 Msa0052930:intron 25.0%
! TTCTCCATATTTATCTCAAT+GGG - chr1_2:7299035-7299054 None:intergenic 25.0%
!! ATTAGAGTTCTAACAGAATT+TGG + chr1_2:7298531-7298550 Msa0052930:intron 25.0%
!! TCTAGCTTACAATATCATTT+CGG + chr1_2:7299327-7299346 Msa0052930:intron 25.0%
! AATGTAACAGCTAAATGATA+AGG + chr1_2:7299509-7299528 Msa0052930:intron 25.0%
!!! AGGTTCTCAACTATTTTAAT+AGG - chr1_2:7299629-7299648 None:intergenic 25.0%
! TTAATCTGTGTTATCAATCT+TGG - chr1_2:7299961-7299980 None:intergenic 25.0%
! TTGAATATTTATTGTGCATG+TGG + chr1_2:7300003-7300022 Msa0052930:intron 25.0%
! TTGAATATTTATTGTGCATG+TGG + chr1_2:7300003-7300022 Msa0052930:intron 25.0%
! CAATTATCTGATAAAGATAC+TGG - chr1_2:7300512-7300531 None:intergenic 25.0%
!!! TTCTCGAGTTATTGTTATTT+CGG + chr1_2:7300646-7300665 Msa0052930:intron 25.0%
! TGCTTAGGTTTATGTTAATA+TGG + chr1_2:7300971-7300990 Msa0052930:intron 25.0%
! TGGAAAAACAGATATTACAA+AGG + chr1_2:7301506-7301525 Msa0052930:CDS 25.0%
! TAGAGTTTCTATTGTTATAC+AGG - chr1_2:7301566-7301585 None:intergenic 25.0%
! CTCAAAAGTTATGAAAATTG+AGG - chr1_2:7301821-7301840 None:intergenic 25.0%
! CAAAATGAAGACTTTTCTGA+AGG - chr1_2:7295289-7295308 None:intergenic 30.0%
! ACTTTTGAATATATGGGGTT+GGG - chr1_2:7295343-7295362 None:intergenic 30.0%
! AACTTTTGAATATATGGGGT+TGG - chr1_2:7295344-7295363 None:intergenic 30.0%
! GGTCAACTTTTGAATATATG+GGG - chr1_2:7295348-7295367 None:intergenic 30.0%
! GGGTCAACTTTTGAATATAT+GGG - chr1_2:7295349-7295368 None:intergenic 30.0%
! TGGGTCAACTTTTGAATATA+TGG - chr1_2:7295350-7295369 None:intergenic 30.0%
CACTACAATAAAACAAGCTA+TGG - chr1_2:7295398-7295417 None:intergenic 30.0%
TCTTTCATAACCCTTAATAG+AGG + chr1_2:7295529-7295548 Msa0052930:five_prime_UTR 30.0%
CTTTCATAACCCTTAATAGA+GGG + chr1_2:7295530-7295549 Msa0052930:five_prime_UTR 30.0%
TCTGAAGAAGGAAAATCAAA+AGG + chr1_2:7295681-7295700 Msa0052930:CDS 30.0%
CTGAAGAAGGAAAATCAAAA+GGG + chr1_2:7295682-7295701 Msa0052930:CDS 30.0%
TGAGTGATAAAGAACTTCTT+TGG + chr1_2:7295904-7295923 Msa0052930:CDS 30.0%
TCTTAGGAACTCTTTCAAAA+GGG - chr1_2:7295962-7295981 None:intergenic 30.0%
ATCTTAGGAACTCTTTCAAA+AGG - chr1_2:7295963-7295982 None:intergenic 30.0%
AGGAACATAAAAGCAATCTT+AGG - chr1_2:7295978-7295997 None:intergenic 30.0%
! GCTTTTATGTTCCTTACTAA+AGG + chr1_2:7295984-7296003 Msa0052930:CDS 30.0%
CAAAATATACATACCTGACT+AGG - chr1_2:7296143-7296162 None:intergenic 30.0%
CCTCAAAACAATCATAAACA+AGG - chr1_2:7296295-7296314 None:intergenic 30.0%
!! CCTTGTTTATGATTGTTTTG+AGG + chr1_2:7296292-7296311 Msa0052930:intron 30.0%
AAGTTCCACTAAACTAATAG+CGG + chr1_2:7296570-7296589 Msa0052930:intron 30.0%
TCAAGTACAATGTTGTCAAA+TGG - chr1_2:7296606-7296625 None:intergenic 30.0%
TAGAACTACATAAGGAACTA+AGG + chr1_2:7296643-7296662 Msa0052930:intron 30.0%
AACTAAGGAAAGACTTATGA+GGG + chr1_2:7296658-7296677 Msa0052930:intron 30.0%
! GAGGGTATACAAAAACATTT+AGG + chr1_2:7296676-7296695 Msa0052930:intron 30.0%
! GTGAGAATATAACATGCTTT+TGG + chr1_2:7296786-7296805 Msa0052930:intron 30.0%
AGGAAAAAATAAGATCACTC+AGG + chr1_2:7296972-7296991 Msa0052930:intron 30.0%
GGAAAAAATAAGATCACTCA+GGG + chr1_2:7296973-7296992 Msa0052930:intron 30.0%
AAGTAATTGTTGCCTATTCA+TGG + chr1_2:7297030-7297049 Msa0052930:intron 30.0%
CAACGAGTTTGATGAAATAA+AGG - chr1_2:7297204-7297223 None:intergenic 30.0%
ACTCGTTGTGATTAAATTAC+GGG + chr1_2:7297216-7297235 Msa0052930:intron 30.0%
AATTTATCATTTGATGCGGT+GGG - chr1_2:7297342-7297361 None:intergenic 30.0%
TAATTTATCATTTGATGCGG+TGG - chr1_2:7297343-7297362 None:intergenic 30.0%
AAATATTAGGCTATGAACAG+AGG - chr1_2:7297491-7297510 None:intergenic 30.0%
ACCAATTGTTGACATAGTTA+AGG + chr1_2:7297596-7297615 Msa0052930:intron 30.0%
ACCTTAACTATGTCAACAAT+TGG - chr1_2:7297600-7297619 None:intergenic 30.0%
TAAAGTTAGTTAGTGCTTGT+AGG + chr1_2:7297623-7297642 Msa0052930:intron 30.0%
GCTTAAGTTTAGAGGAAATT+TGG - chr1_2:7297727-7297746 None:intergenic 30.0%
TATTAAGTGAAGGACATGAT+TGG + chr1_2:7297747-7297766 Msa0052930:intron 30.0%
GAGTTTCCAATATTGTGTAT+GGG + chr1_2:7298071-7298090 Msa0052930:intron 30.0%
TCTCCCATTGAGATAAAATA+TGG + chr1_2:7298366-7298385 Msa0052930:intron 30.0%
TAGTACTAGTTAGAGTTAGT+TGG + chr1_2:7298492-7298511 Msa0052930:intron 30.0%
GATGTAGGGAGAAAAAAATT+AGG + chr1_2:7298571-7298590 Msa0052930:intron 30.0%
! TAAAACATTGTCATTTGGTG+AGG + chr1_2:7298702-7298721 Msa0052930:intron 30.0%
GTTCTCCATATTTATCTCAA+TGG - chr1_2:7299036-7299055 None:intergenic 30.0%
TTAACTAAGTCAGCAATTGA+GGG - chr1_2:7299138-7299157 None:intergenic 30.0%
GATGTAGGGAGAAAAAAATT+AGG + chr1_2:7298571-7298590 Msa0052930:intron 30.0%
CTAGCTTACAATATCATTTC+GGG + chr1_2:7299328-7299347 Msa0052930:intron 30.0%
! TAAAACATTGTCATTTGGTG+AGG + chr1_2:7298702-7298721 Msa0052930:intron 30.0%
! CATTAAAACGTTGTCATTTC+AGG - chr1_2:7299474-7299493 None:intergenic 30.0%
!! TCTCGAGTTATTGTTATTTC+GGG + chr1_2:7300647-7300666 Msa0052930:intron 30.0%
ATTAGCAAGTAGTCTTCTTT+CGG - chr1_2:7301070-7301089 None:intergenic 30.0%
CAATAGAATAAAACGCTCAT+TGG - chr1_2:7301109-7301128 None:intergenic 30.0%
!! ATTTTGTAACGTTGACTAGA+GGG - chr1_2:7301263-7301282 None:intergenic 30.0%
TTCGAACTTAGGATAAAATG+CGG - chr1_2:7301349-7301368 None:intergenic 30.0%
GAATTCACCATATCTAACAA+AGG - chr1_2:7301636-7301655 None:intergenic 30.0%
! TTTTATTATATGGCATGGCA+TGG + chr1_2:7301750-7301769 Msa0052930:three_prime_UTR 30.0%
GAATGTACAAATGAGCTTAT+TGG + chr1_2:7301849-7301868 Msa0052930:three_prime_UTR 30.0%
AGAACAAGATTATGGCACAT+GGG - chr1_2:7295319-7295338 None:intergenic 35.0%
! CTTTTGAATATATGGGGTTG+GGG - chr1_2:7295342-7295361 None:intergenic 35.0%
GGCGTTAAATTTATGGTCTA+CGG - chr1_2:7295444-7295463 None:intergenic 35.0%
! TTTTAAGCAAGATGCAATCG+AGG + chr1_2:7295649-7295668 Msa0052930:exon 35.0%
TTTAAGCAAGATGCAATCGA+GGG + chr1_2:7295650-7295669 Msa0052930:exon 35.0%
AAAACACAACACATAGTGCA+AGG - chr1_2:7295743-7295762 None:intergenic 35.0%
TTATGGATCAGATTTGAAGG+AGG - chr1_2:7295882-7295901 None:intergenic 35.0%
GGCTGATATGCACTTTATTA+TGG + chr1_2:7296346-7296365 Msa0052930:intron 35.0%
! CTATACCGCTATTAGTTTAG+TGG - chr1_2:7296578-7296597 None:intergenic 35.0%
AGTACAATGTTGTCAAATGG+TGG - chr1_2:7296603-7296622 None:intergenic 35.0%
ATTGTACTTGATCAGTTCAC+CGG + chr1_2:7296615-7296634 Msa0052930:intron 35.0%
GAACTAAGGAAAGACTTATG+AGG + chr1_2:7296657-7296676 Msa0052930:intron 35.0%
TCGACGAGTTAAATTTCTCA+AGG + chr1_2:7296734-7296753 Msa0052930:intron 35.0%
CGACGAGTTAAATTTCTCAA+GGG + chr1_2:7296735-7296754 Msa0052930:intron 35.0%
ATAAGTGTGCAGAAACATGT+TGG + chr1_2:7296820-7296839 Msa0052930:intron 35.0%
ACGTATAATTAGGTCGTATG+TGG - chr1_2:7296850-7296869 None:intergenic 35.0%
CCAACTAGGTACGTATAATT+AGG - chr1_2:7296860-7296879 None:intergenic 35.0%
CCTAATTATACGTACCTAGT+TGG + chr1_2:7296857-7296876 Msa0052930:intron 35.0%
TGAATTTGCAACAACCAACT+AGG - chr1_2:7296874-7296893 None:intergenic 35.0%
CATGATACAAGTTTGAGAGA+AGG + chr1_2:7296952-7296971 Msa0052930:intron 35.0%
ATAAGATCACTCAGGGATTA+AGG + chr1_2:7296980-7296999 Msa0052930:intron 35.0%
ATTACTTCCATGTCTCTTCT+TGG - chr1_2:7297017-7297036 None:intergenic 35.0%
ACAGATAACAGACCATGAAT+AGG - chr1_2:7297045-7297064 None:intergenic 35.0%
GTCTGTTATCTGTTTGTAGA+GGG + chr1_2:7297052-7297071 Msa0052930:intron 35.0%
!! TGCACGTATTTTGGATTTCA+TGG + chr1_2:7297103-7297122 Msa0052930:intron 35.0%
!! GCACGTATTTTGGATTTCAT+GGG + chr1_2:7297104-7297123 Msa0052930:intron 35.0%
! TTTTGGATTTCATGGGAAGA+TGG + chr1_2:7297111-7297130 Msa0052930:intron 35.0%
! TTTTACTGCATGTTCGGATT+TGG + chr1_2:7297148-7297167 Msa0052930:intron 35.0%
CGAGTTTGATGAAATAAAGG+TGG - chr1_2:7297201-7297220 None:intergenic 35.0%
CTCGTTGTGATTAAATTACG+GGG + chr1_2:7297217-7297236 Msa0052930:intron 35.0%
GCTTAAGCATATAGGAAAGT+TGG - chr1_2:7297254-7297273 None:intergenic 35.0%
GCTATTAATATACGGACACA+TGG + chr1_2:7297272-7297291 Msa0052930:intron 35.0%
TTAATATACGGACACATGGT+TGG + chr1_2:7297276-7297295 Msa0052930:intron 35.0%
TAAGTTGTGAAGAATAAGGG+TGG + chr1_2:7297361-7297380 Msa0052930:intron 35.0%
CTTAAAAGTCTACAGCAAAC+AGG + chr1_2:7297568-7297587 Msa0052930:intron 35.0%
AATTCTAACAGAATCTGGCA+CGG + chr1_2:7297657-7297676 Msa0052930:intron 35.0%
AAAACTGTAGGGAGAAGATT+AGG + chr1_2:7297689-7297708 Msa0052930:intron 35.0%
CTGTGTATCATCACACTTTA+TGG - chr1_2:7297789-7297808 None:intergenic 35.0%
AGGTTAATATCAGCATGCAA+TGG - chr1_2:7297819-7297838 None:intergenic 35.0%
TAACCTGTGAAGAATAAGGA+TGG + chr1_2:7297833-7297852 Msa0052930:intron 35.0%
CGATAAGTGATTGACAACAT+TGG + chr1_2:7298023-7298042 Msa0052930:intron 35.0%
TGGTAGAAATTCAGATCACT+TGG + chr1_2:7298043-7298062 Msa0052930:intron 35.0%
AAATTCAGATCACTTGGTCA+AGG + chr1_2:7298049-7298068 Msa0052930:intron 35.0%
GGAGTTTCCAATATTGTGTA+TGG + chr1_2:7298070-7298089 Msa0052930:intron 35.0%
CCATGTCTCATTTACATATG+TGG - chr1_2:7298228-7298247 None:intergenic 35.0%
CCACATATGTAAATGAGACA+TGG + chr1_2:7298225-7298244 Msa0052930:intron 35.0%
! TTGAAATCCTTAAAGTGTCC+CGG - chr1_2:7298268-7298287 None:intergenic 35.0%
CTTAAAAGCCTACATCAAAC+AGG + chr1_2:7298441-7298460 Msa0052930:intron 35.0%
TTAACTAAGTCAGCAATTGG+GGG - chr1_2:7298470-7298489 None:intergenic 35.0%
CTTAACTAAGTCAGCAATTG+GGG - chr1_2:7298471-7298490 None:intergenic 35.0%
CCTTAACTAAGTCAGCAATT+GGG - chr1_2:7298472-7298491 None:intergenic 35.0%
ACCTTAACTAAGTCAGCAAT+TGG - chr1_2:7298473-7298492 None:intergenic 35.0%
!! TTTGACTTTTGACAACCTTG+CGG - chr1_2:7298597-7298616 None:intergenic 35.0%
AACAAGTTTGCAAGTAGACT+CGG + chr1_2:7298732-7298751 Msa0052930:intron 35.0%
! TTTCAAGTGGACTCTTATGA+TGG + chr1_2:7298759-7298778 Msa0052930:intron 35.0%
TCCACATATGTAAATGAGAC+AGG + chr1_2:7298224-7298243 Msa0052930:intron 35.0%
CCACATATGTAAATGAGACA+GGG + chr1_2:7298225-7298244 Msa0052930:intron 35.0%
CTTAAAAGCCTACATCAAAC+AGG + chr1_2:7298441-7298460 Msa0052930:intron 35.0%
CTTAACTAAGTCAGCAATTG+AGG - chr1_2:7298471-7298490 None:intergenic 35.0%
!! CTCAATTGCTGACTTAGTTA+AGG + chr1_2:7299137-7299156 Msa0052930:intron 35.0%
!! TAGAGTTAGTTTGTGCTTGT+AGG + chr1_2:7299164-7299183 Msa0052930:intron 35.0%
TCATAACCATATGAGTCTCT+AGG + chr1_2:7299288-7299307 Msa0052930:intron 35.0%
TTGATACCTAGAGACTCATA+TGG - chr1_2:7299297-7299316 None:intergenic 35.0%
! TGTCATTTGGTGAGGAAAAT+TGG + chr1_2:7299372-7299391 Msa0052930:intron 35.0%
AGTAGACTCAGATCATTTCA+AGG + chr1_2:7299406-7299425 Msa0052930:intron 35.0%
GGTTAATGTTTAGTGCACTA+TGG - chr1_2:7299537-7299556 None:intergenic 35.0%
ATACCTAAAATGCCCTTACT+AGG - chr1_2:7299603-7299622 None:intergenic 35.0%
!!! CTCTTTTTTTTACCTCATCG+TGG + chr1_2:7299731-7299750 Msa0052930:intron 35.0%
TCTGTGTTATCAATCTTGGA+TGG - chr1_2:7299957-7299976 None:intergenic 35.0%
!! TGTGTTTGTTGAGTTGAGAT+TGG + chr1_2:7300318-7300337 Msa0052930:intron 35.0%
!!! TGTTGAGTTGAGATTGGTTT+TGG + chr1_2:7300324-7300343 Msa0052930:intron 35.0%
!!! GAGATTGGTTTTGGTTCTTT+AGG + chr1_2:7300333-7300352 Msa0052930:intron 35.0%
!!! TTGGTTTTGGTTCTTTAGGA+TGG + chr1_2:7300337-7300356 Msa0052930:intron 35.0%
TTCATCACTTGTTCAAGCTA+AGG + chr1_2:7300407-7300426 Msa0052930:intron 35.0%
TCATCACTTGTTCAAGCTAA+GGG + chr1_2:7300408-7300427 Msa0052930:intron 35.0%
!! ACGCAAAAAGAGCATCTTTA+TGG - chr1_2:7300546-7300565 None:intergenic 35.0%
! GCTCTTTTTGCGTTAAGAAT+CGG + chr1_2:7300553-7300572 Msa0052930:intron 35.0%
TTAAGAATCGGTAAAGACTG+CGG + chr1_2:7300565-7300584 Msa0052930:intron 35.0%
TGCGGATATGAATAGCATTT+GGG + chr1_2:7300583-7300602 Msa0052930:intron 35.0%
GATATGAATAGCATTTGGGT+AGG + chr1_2:7300587-7300606 Msa0052930:intron 35.0%
ACACCATATCTTCACCATAT+GGG - chr1_2:7300761-7300780 None:intergenic 35.0%
! TTTTGTTGCAGTTCTCTGTT+GGG - chr1_2:7300843-7300862 None:intergenic 35.0%
! TTTTTGTTGCAGTTCTCTGT+TGG - chr1_2:7300844-7300863 None:intergenic 35.0%
CTAGACTGAATTTGTAGAGA+GGG - chr1_2:7301146-7301165 None:intergenic 35.0%
ACTAGACTGAATTTGTAGAG+AGG - chr1_2:7301147-7301166 None:intergenic 35.0%
AAATCCAAATTCAGCTTCGT+CGG + chr1_2:7301183-7301202 Msa0052930:CDS 35.0%
!! TTTTGTAACGTTGACTAGAG+GGG - chr1_2:7301262-7301281 None:intergenic 35.0%
!! CATTTTGTAACGTTGACTAG+AGG - chr1_2:7301264-7301283 None:intergenic 35.0%
CTCTAGTCAACGTTACAAAA+TGG + chr1_2:7301262-7301281 Msa0052930:CDS 35.0%
AACGTTACAAAATGGCGTAA+AGG + chr1_2:7301270-7301289 Msa0052930:CDS 35.0%
CTACAGTATTGTTCGAACTT+AGG - chr1_2:7301360-7301379 None:intergenic 35.0%
AACCATGTTAACCATTCAAG+CGG + chr1_2:7301413-7301432 Msa0052930:CDS 35.0%
! TTTTCCAAATGTAGCTGGAT+GGG - chr1_2:7301493-7301512 None:intergenic 35.0%
! TTTTTCCAAATGTAGCTGGA+TGG - chr1_2:7301494-7301513 None:intergenic 35.0%
!! TCTGTTTTTCCAAATGTAGC+TGG - chr1_2:7301498-7301517 None:intergenic 35.0%
!!! GAGTTTTTTGATAGAGTTCG+TGG + chr1_2:7301528-7301547 Msa0052930:CDS 35.0%
!!! TTTTTTGATAGAGTTCGTGG+AGG + chr1_2:7301531-7301550 Msa0052930:CDS 35.0%
CATATCTAACAAAGGTTCCA+AGG - chr1_2:7301628-7301647 None:intergenic 35.0%
CTTGGAACCTTTGTTAGATA+TGG + chr1_2:7301626-7301645 Msa0052930:CDS 35.0%
GAGAACAAGATTATGGCACA+TGG - chr1_2:7295320-7295339 None:intergenic 40.0%
TCGAAGTTGTAGACTATGCT+GGG - chr1_2:7295369-7295388 None:intergenic 40.0%
ATCGAAGTTGTAGACTATGC+TGG - chr1_2:7295370-7295389 None:intergenic 40.0%
TCATAACCCTTAATAGAGGG+TGG + chr1_2:7295533-7295552 Msa0052930:five_prime_UTR 40.0%
TGGTAACCACCCTCTATTAA+GGG - chr1_2:7295542-7295561 None:intergenic 40.0%
ATGGTAACCACCCTCTATTA+AGG - chr1_2:7295543-7295562 None:intergenic 40.0%
!!! GCATTTTGGAATTCAGAGTG+TGG + chr1_2:7295788-7295807 Msa0052930:CDS 40.0%
! ACTTCTTTGGAGAGCTTCTT+TGG + chr1_2:7295917-7295936 Msa0052930:CDS 40.0%
! TTTGGGAGAGGTTTCTGAAA+GGG + chr1_2:7296027-7296046 Msa0052930:CDS 40.0%
! TTGGCTTGATAAGAAGGAGT+TGG - chr1_2:7296083-7296102 None:intergenic 40.0%
! GGAAACTTGGCTTGATAAGA+AGG - chr1_2:7296089-7296108 None:intergenic 40.0%
AACAGATGAAGGAGGAAACT+TGG - chr1_2:7296102-7296121 None:intergenic 40.0%
TAAGAGACAAATCCCTAGTC+AGG + chr1_2:7296127-7296146 Msa0052930:CDS 40.0%
ACTCGTCATGTAACAATGAC+GGG - chr1_2:7296419-7296438 None:intergenic 40.0%
CACTCGTCATGTAACAATGA+CGG - chr1_2:7296420-7296439 None:intergenic 40.0%
TTGTACTTGATCAGTTCACC+GGG + chr1_2:7296616-7296635 Msa0052930:intron 40.0%
!! CTTATGTAGTTCTAGCAACC+CGG - chr1_2:7296637-7296656 None:intergenic 40.0%
GGTCTGTTATCTGTTTGTAG+AGG + chr1_2:7297051-7297070 Msa0052930:intron 40.0%
TGTTATCTGTTTGTAGAGGG+TGG + chr1_2:7297055-7297074 Msa0052930:intron 40.0%
GTTATCTGTTTGTAGAGGGT+GGG + chr1_2:7297056-7297075 Msa0052930:intron 40.0%
TTATCTGTTTGTAGAGGGTG+GGG + chr1_2:7297057-7297076 Msa0052930:intron 40.0%
TACGTGCAGATCATCCATTT+AGG - chr1_2:7297091-7297110 None:intergenic 40.0%
! TGGATGATCTGCACGTATTT+TGG + chr1_2:7297094-7297113 Msa0052930:intron 40.0%
CTATGATTCTACCTAACTCG+CGG - chr1_2:7297174-7297193 None:intergenic 40.0%
TTAAATTACGGGGCTTGTCA+AGG + chr1_2:7297227-7297246 Msa0052930:intron 40.0%
!!! TGGTTGGTTTTACAGCCATT+TGG + chr1_2:7297292-7297311 Msa0052930:intron 40.0%
! CTCAGTATCATCGCATTTTG+TGG - chr1_2:7297318-7297337 None:intergenic 40.0%
TGTGAAGAATAAGGGTGGAA+AGG + chr1_2:7297366-7297385 Msa0052930:intron 40.0%
GGACAAGCTACAAAACTGTA+GGG + chr1_2:7297678-7297697 Msa0052930:intron 40.0%
!! TGATTGGTTTGACAGCCATT+TGG + chr1_2:7297763-7297782 Msa0052930:intron 40.0%
CATCACACTTTATGGCCAAA+TGG - chr1_2:7297781-7297800 None:intergenic 40.0%
TGTCCATCCTTATTCTTCAC+AGG - chr1_2:7297839-7297858 None:intergenic 40.0%
TGTGAAGAATAAGGATGGAC+AGG + chr1_2:7297838-7297857 Msa0052930:intron 40.0%
GCTAGTCCCATACACAATAT+TGG - chr1_2:7298080-7298099 None:intergenic 40.0%
! TGAAATCCTTAAAGTGTCCC+GGG - chr1_2:7298267-7298286 None:intergenic 40.0%
AAATATGGAGAACTCCCTGT+CGG + chr1_2:7298381-7298400 Msa0052930:intron 40.0%
!! CCCAATTGCTGACTTAGTTA+AGG + chr1_2:7298469-7298488 Msa0052930:intron 40.0%
TAACAGAATTTGGCAGACAC+AGG + chr1_2:7298541-7298560 Msa0052930:intron 40.0%
ACACAGGCTACAAAGATGTA+GGG + chr1_2:7298557-7298576 Msa0052930:intron 40.0%
GAGAAAAAAATTAGGCCGCA+AGG + chr1_2:7298579-7298598 Msa0052930:intron 40.0%
TTGATACCTAGAGTCTCATC+TGG - chr1_2:7298635-7298654 None:intergenic 40.0%
TAGACTCGGATCATTTCAAG+TGG + chr1_2:7298746-7298765 Msa0052930:intron 40.0%
CCCTGTCTCATTTACATATG+TGG - chr1_2:7298845-7298864 None:intergenic 40.0%
!! AATTCCTTAAAGAGTGTCCC+GGG - chr1_2:7298884-7298903 None:intergenic 40.0%
!! GAATTCCTTAAAGAGTGTCC+CGG - chr1_2:7298885-7298904 None:intergenic 40.0%
TAACAGAATTTGGCAGACAC+AGG + chr1_2:7298541-7298560 Msa0052930:intron 40.0%
ACACAGGCTACAAAGATGTA+GGG + chr1_2:7298557-7298576 Msa0052930:intron 40.0%
TTTCAAGGAGACTCGTATGA+TGG + chr1_2:7299421-7299440 Msa0052930:intron 40.0%
! TGTCATTTCAGGCATCTCAA+GGG - chr1_2:7299463-7299482 None:intergenic 40.0%
! TTGTCATTTCAGGCATCTCA+AGG - chr1_2:7299464-7299483 None:intergenic 40.0%
TGCACTAAACATTAACCTCG+CGG + chr1_2:7299540-7299559 Msa0052930:intron 40.0%
TGCAAATCGTGTCCTAGTAA+GGG + chr1_2:7299588-7299607 Msa0052930:intron 40.0%
!!! TGTCCTAGTAAGGGCATTTT+AGG + chr1_2:7299597-7299616 Msa0052930:intron 40.0%
TACAGTTAATCCTTGCTGAG+AGG - chr1_2:7299779-7299798 None:intergenic 40.0%
! AAATGCCAAGGAGGTATAGT+GGG - chr1_2:7299912-7299931 None:intergenic 40.0%
! AAAATGCCAAGGAGGTATAG+TGG - chr1_2:7299913-7299932 None:intergenic 40.0%
! ACTATACCTCCTTGGCATTT+TGG + chr1_2:7299912-7299931 Msa0052930:intron 40.0%
! CTATACCTCCTTGGCATTTT+GGG + chr1_2:7299913-7299932 Msa0052930:intron 40.0%
! TATACCTCCTTGGCATTTTG+GGG + chr1_2:7299914-7299933 Msa0052930:intron 40.0%
GTGTTATCAATCTTGGATGG+TGG - chr1_2:7299954-7299973 None:intergenic 40.0%
ACAAGTGATGAACCTAGGTT+AGG - chr1_2:7300399-7300418 None:intergenic 40.0%
CTTGAACAAGTGATGAACCT+AGG - chr1_2:7300404-7300423 None:intergenic 40.0%
CTGCGGATATGAATAGCATT+TGG + chr1_2:7300582-7300601 Msa0052930:intron 40.0%
TTTGGGTAGGATAACATAGC+TGG + chr1_2:7300600-7300619 Msa0052930:intron 40.0%
!! AAGTGTTGATGTGTCAAGTG+TGG + chr1_2:7300676-7300695 Msa0052930:intron 40.0%
!! AGTGTTGATGTGTCAAGTGT+GGG + chr1_2:7300677-7300696 Msa0052930:intron 40.0%
TCCACATCTTCATCCAATGT+CGG - chr1_2:7300711-7300730 None:intergenic 40.0%
GACACCATATCTTCACCATA+TGG - chr1_2:7300762-7300781 None:intergenic 40.0%
!! ATGGTGTCCAAACCACTTTT+TGG + chr1_2:7300774-7300793 Msa0052930:intron 40.0%
AGAGCAACCAAAAAGTGGTT+TGG - chr1_2:7300784-7300803 None:intergenic 40.0%
GACTAAGAGCAACCAAAAAG+TGG - chr1_2:7300789-7300808 None:intergenic 40.0%
!!! TGCATCTGTTGCTTTTGCTT+AGG + chr1_2:7300956-7300975 Msa0052930:intron 40.0%
TTCTTGTTCAGATTGCTGAG+TGG + chr1_2:7301022-7301041 Msa0052930:intron 40.0%
TCTTGTTCAGATTGCTGAGT+GGG + chr1_2:7301023-7301042 Msa0052930:intron 40.0%
GTAGAGAGGGATACATGATT+CGG - chr1_2:7301133-7301152 None:intergenic 40.0%
! TTTGATGATCCTGGTCCATA+CGG + chr1_2:7301210-7301229 Msa0052930:CDS 40.0%
GTTCGAACAATACTGTAGAC+CGG + chr1_2:7301362-7301381 Msa0052930:CDS 40.0%
GCTTGAATGGTTAACATGGT+TGG - chr1_2:7301414-7301433 None:intergenic 40.0%
ACCATGTTAACCATTCAAGC+GGG + chr1_2:7301414-7301433 Msa0052930:CDS 40.0%
! AAAATTTGCTCCTAGTGCCT+TGG + chr1_2:7301608-7301627 Msa0052930:CDS 40.0%
GGTTGGGGAGAACAAGATTA+TGG - chr1_2:7295327-7295346 None:intergenic 45.0%
!! AACGTGCTGGTTTGGAACAA+TGG + chr1_2:7295850-7295869 Msa0052930:CDS 45.0%
GAGGCAATGGTCCTTTAGTA+AGG - chr1_2:7295998-7296017 None:intergenic 45.0%
ATTGCCTCTTGCACCTGTTT+GGG + chr1_2:7296010-7296029 Msa0052930:CDS 45.0%
TTCAGAAACCTCTCCCAAAC+AGG - chr1_2:7296026-7296045 None:intergenic 45.0%
GTTTGGGAGAGGTTTCTGAA+AGG + chr1_2:7296026-7296045 Msa0052930:CDS 45.0%
ATGACGAGTGTTATCAGTCG+CGG + chr1_2:7296430-7296449 Msa0052930:intron 45.0%
CGGGTTGCTAGAACTACATA+AGG + chr1_2:7296635-7296654 Msa0052930:intron 45.0%
ACTTCCATGTCTCTTCTTGG+AGG - chr1_2:7297014-7297033 None:intergenic 45.0%
TATCTGTTTGTAGAGGGTGG+GGG + chr1_2:7297058-7297077 Msa0052930:intron 45.0%
! CATCGCATTTTGTGGCCAAA+TGG - chr1_2:7297310-7297329 None:intergenic 45.0%
CGGACAAGCTACAAAACTGT+AGG + chr1_2:7297677-7297696 Msa0052930:intron 45.0%
ACTATAGCGCTGTAGCATAG+CGG + chr1_2:7297975-7297994 Msa0052930:intron 45.0%
! GAAATCCTTAAAGTGTCCCG+GGG - chr1_2:7298266-7298285 None:intergenic 45.0%
GACACAGGCTACAAAGATGT+AGG + chr1_2:7298556-7298575 Msa0052930:intron 45.0%
TCAGAACCAGATGAGACTCT+AGG + chr1_2:7298626-7298645 Msa0052930:intron 45.0%
!! ATTCCTTAAAGAGTGTCCCG+GGG - chr1_2:7298883-7298902 None:intergenic 45.0%
TAAAAGCTGCCAACCAAGTC+GGG - chr1_2:7299061-7299080 None:intergenic 45.0%
CTAAAAGCTGCCAACCAAGT+CGG - chr1_2:7299062-7299081 None:intergenic 45.0%
GACACAGGCTACAAAGATGT+AGG + chr1_2:7298556-7298575 Msa0052930:intron 45.0%
GTCATTTCAGGCATCTCAAG+GGG - chr1_2:7299462-7299481 None:intergenic 45.0%
CTGCAAATCGTGTCCTAGTA+AGG + chr1_2:7299587-7299606 Msa0052930:intron 45.0%
! TTGCTAGAGAGAGAAGCACA+AGG - chr1_2:7299657-7299676 None:intergenic 45.0%
GGATGAAATTGACCACGATG+AGG - chr1_2:7299746-7299765 None:intergenic 45.0%
TTGCTGAGAGGATGTTGCAA+TGG - chr1_2:7299767-7299786 None:intergenic 45.0%
ATTGCAACATCCTCTCAGCA+AGG + chr1_2:7299766-7299785 Msa0052930:intron 45.0%
TACTACCCACTATACCTCCT+TGG + chr1_2:7299904-7299923 Msa0052930:intron 45.0%
!! TCTTGGATGGTGGAGCAAAA+TGG - chr1_2:7299944-7299963 None:intergenic 45.0%
! GTTCTGTCACTTCCTAACCT+AGG + chr1_2:7300384-7300403 Msa0052930:intron 45.0%
TCCGACATTGGATGAAGATG+TGG + chr1_2:7300707-7300726 Msa0052930:intron 45.0%
TGAGCAGCTATACAAGTGAG+AGG + chr1_2:7300734-7300753 Msa0052930:intron 45.0%
GAGCAGCTATACAAGTGAGA+GGG + chr1_2:7300735-7300754 Msa0052930:intron 45.0%
AGTTCTCTGTTGGGTCATGA+GGG - chr1_2:7300834-7300853 None:intergenic 45.0%
CTTGTTCAGATTGCTGAGTG+GGG + chr1_2:7301024-7301043 Msa0052930:intron 45.0%
AATGGCGTAAAGGCTCTCAA+TGG + chr1_2:7301280-7301299 Msa0052930:CDS 45.0%
GGTGTCTTCCACAATATGGA+CGG - chr1_2:7301328-7301347 None:intergenic 45.0%
ATGCGGTGTCTTCCACAATA+TGG - chr1_2:7301332-7301351 None:intergenic 45.0%
CCATGTTAACCATTCAAGCG+GGG + chr1_2:7301415-7301434 Msa0052930:CDS 45.0%
TGGCAAATCGGAGCATAACT+TGG + chr1_2:7301445-7301464 Msa0052930:CDS 45.0%
GGCAAATCGGAGCATAACTT+GGG + chr1_2:7301446-7301465 Msa0052930:CDS 45.0%
AAATCGGAGCATAACTTGGG+TGG + chr1_2:7301449-7301468 Msa0052930:CDS 45.0%
! AACAAAGGTTCCAAGGCACT+AGG - chr1_2:7301621-7301640 None:intergenic 45.0%
ATGGTGATTGCCTCATTGGA+TGG + chr1_2:7301769-7301788 Msa0052930:three_prime_UTR 45.0%
CTAGCATTCACCATCCAATG+AGG - chr1_2:7301782-7301801 None:intergenic 45.0%
GGATGGTGAATGCTAGATGA+TGG + chr1_2:7301786-7301805 Msa0052930:three_prime_UTR 45.0%
CAAGATGCAATCGAGGGCTT+TGG + chr1_2:7295656-7295675 Msa0052930:exon 50.0%
! AGGGCTTTGGCATCTGAAGA+AGG + chr1_2:7295669-7295688 Msa0052930:CDS 50.0%
!! CGTTGAAGAACGTGCTGGTT+TGG + chr1_2:7295842-7295861 Msa0052930:CDS 50.0%
CAAACAGGTGCAAGAGGCAA+TGG - chr1_2:7296011-7296030 None:intergenic 50.0%
CATTGCCTCTTGCACCTGTT+TGG + chr1_2:7296009-7296028 Msa0052930:CDS 50.0%
GCTTCCTCCAAGAAGAGACA+TGG + chr1_2:7297007-7297026 Msa0052930:intron 50.0%
ATCTGTTTGTAGAGGGTGGG+GGG + chr1_2:7297059-7297078 Msa0052930:intron 50.0%
AGGGAGAAGATTAGGCAGCA+TGG + chr1_2:7297697-7297716 Msa0052930:intron 50.0%
GCTATGCTACAGCGCTATAG+TGG - chr1_2:7297976-7297995 None:intergenic 50.0%
TCAGCTAAAAGCTGCCGACA+GGG - chr1_2:7298398-7298417 None:intergenic 50.0%
AAATGCTAACAAGTGCCCCC+GGG - chr1_2:7299012-7299031 None:intergenic 50.0%
GAAATGCTAACAAGTGCCCC+CGG - chr1_2:7299013-7299032 None:intergenic 50.0%
ATATGGAGAACTCCCCGACT+TGG + chr1_2:7299045-7299064 Msa0052930:intron 50.0%
AAAAGCTGCCAACCAAGTCG+GGG - chr1_2:7299060-7299079 None:intergenic 50.0%
GAGGGCTTCCTGTTTGATGT+AGG - chr1_2:7299120-7299139 None:intergenic 50.0%
AGTCTAGTGCTAAAACCGCG+AGG - chr1_2:7299558-7299577 None:intergenic 50.0%
GACACGATTTGCAGCATCTG+TGG - chr1_2:7299581-7299600 None:intergenic 50.0%
! GAGAGAAGCACAAGGTTGAG+AGG - chr1_2:7299649-7299668 None:intergenic 50.0%
AACAGAGGTCTGCACAGAGA+TGG - chr1_2:7299687-7299706 None:intergenic 50.0%
AGCTCTGCAGCAAGAAACAG+AGG - chr1_2:7299702-7299721 None:intergenic 50.0%
!! GTGGGTTAGAAGTCCGACAT+TGG + chr1_2:7300695-7300714 Msa0052930:intron 50.0%
TACAAGTGAGAGGGCCCATA+TGG + chr1_2:7300744-7300763 Msa0052930:intron 50.0%
GGGCCCATATGGTGAAGATA+TGG + chr1_2:7300755-7300774 Msa0052930:intron 50.0%
TAGTCTACCGTGATGATCCC+TGG + chr1_2:7300804-7300823 Msa0052930:intron 50.0%
AGTCTACCGTGATGATCCCT+GGG + chr1_2:7300805-7300824 Msa0052930:intron 50.0%
GTTCTCTGTTGGGTCATGAG+GGG - chr1_2:7300833-7300852 None:intergenic 50.0%
CAGTTCTCTGTTGGGTCATG+AGG - chr1_2:7300835-7300854 None:intergenic 50.0%
TTCAGATTGCTGAGTGGGGA+AGG + chr1_2:7301028-7301047 Msa0052930:intron 50.0%
! TGCACCGACGAAGCTGAATT+TGG - chr1_2:7301190-7301209 None:intergenic 50.0%
! GTCGGTGCATTTGATGATCC+TGG + chr1_2:7301201-7301220 Msa0052930:CDS 50.0%
TTGTAGCGTCCTCTTCCGTA+TGG - chr1_2:7301228-7301247 None:intergenic 50.0%
AGGACGCTACAACCCAAACA+TGG + chr1_2:7301236-7301255 Msa0052930:CDS 50.0%
TGACTAGAGGGGCCATGTTT+GGG - chr1_2:7301251-7301270 None:intergenic 50.0%
TTGACTAGAGGGGCCATGTT+TGG - chr1_2:7301252-7301271 None:intergenic 50.0%
CAAGCTTGCCGTCCATATTG+TGG + chr1_2:7301317-7301336 Msa0052930:CDS 50.0%
TGCTCGTCGACATAACAAGC+CGG - chr1_2:7301384-7301403 None:intergenic 50.0%
CCCCGCTTGAATGGTTAACA+TGG - chr1_2:7301418-7301437 None:intergenic 50.0%
GGAGCATAACTTGGGTGGAT+TGG + chr1_2:7301454-7301473 Msa0052930:CDS 50.0%
!! ACTTGGGTGGATTGGTCTAG+AGG + chr1_2:7301462-7301481 Msa0052930:CDS 50.0%
TGGCATGGTGATTGCCTCAT+TGG + chr1_2:7301765-7301784 Msa0052930:three_prime_UTR 50.0%
CCAGCACGTTCTTCAACGCA+TGG - chr1_2:7295840-7295859 None:intergenic 55.0%
CCATGCGTTGAAGAACGTGC+TGG + chr1_2:7295837-7295856 Msa0052930:CDS 55.0%
CTCTCCCAAACAGGTGCAAG+AGG - chr1_2:7296017-7296036 None:intergenic 55.0%
CTCTTGCACCTGTTTGGGAG+AGG + chr1_2:7296015-7296034 Msa0052930:CDS 55.0%
GTGGGGGGTAACAGCCTAAA+TGG + chr1_2:7297074-7297093 Msa0052930:intron 55.0%
TTCGGATTTGGCCGCGAGTT+AGG + chr1_2:7297160-7297179 Msa0052930:intron 55.0%
!! TTCCCATTGAAGAGTGCCCC+CGG + chr1_2:7298331-7298350 Msa0052930:intron 55.0%
TGGGAGATGCTAACGAGTGC+CGG - chr1_2:7298353-7298372 None:intergenic 55.0%
CTCAGCTAAAAGCTGCCGAC+AGG - chr1_2:7298399-7298418 None:intergenic 55.0%
GGGGGCTTCCTGTTTGATGT+AGG - chr1_2:7298452-7298471 None:intergenic 55.0%
GGTCTTGCTAATGAGTGCCC+CGG + chr1_2:7298863-7298882 Msa0052930:intron 55.0%
GTCTTGCTAATGAGTGCCCC+GGG + chr1_2:7298864-7298883 Msa0052930:intron 55.0%
!! AAGGCCCTTAAAGAGTGCCC+CGG + chr1_2:7298991-7299010 Msa0052930:intron 55.0%
AATGCTAACAAGTGCCCCCG+GGG - chr1_2:7299011-7299030 None:intergenic 55.0%
GTTTCTTGCTGCAGAGCTGC+TGG + chr1_2:7299704-7299723 Msa0052930:intron 55.0%
!!! CCTCCTTGGCATTTTGGGGT+CGG + chr1_2:7299918-7299937 Msa0052930:intron 55.0%
GATCCTGGTCCATACGGAAG+AGG + chr1_2:7301216-7301235 Msa0052930:CDS 55.0%
CAACACACTCCCCGCTTGAA+TGG - chr1_2:7301427-7301446 None:intergenic 55.0%
! CATTCAAGCGGGGAGTGTGT+TGG + chr1_2:7301425-7301444 Msa0052930:CDS 55.0%
! CGGGGAGTGTGTTGGCAAAT+CGG + chr1_2:7301433-7301452 Msa0052930:CDS 55.0%
!! TGGGTGGATTGGTCTAGAGG+TGG + chr1_2:7301465-7301484 Msa0052930:CDS 55.0%
!! GGGTGGATTGGTCTAGAGGT+GGG + chr1_2:7301466-7301485 Msa0052930:CDS 55.0%
!! GGTGGATTGGTCTAGAGGTG+GGG + chr1_2:7301467-7301486 Msa0052930:CDS 55.0%
GGTCTTGCTAACGAGTGCCC+CGG + chr1_2:7298246-7298265 Msa0052930:intron 60.0%
GTCTTGCTAACGAGTGCCCC+GGG + chr1_2:7298247-7298266 Msa0052930:intron 60.0%
GAGTGCCCCGGGACACTTTA+AGG + chr1_2:7298258-7298277 Msa0052930:intron 60.0%
!! TGCCGGGGGCACTCTTCAAT+GGG - chr1_2:7298336-7298355 None:intergenic 60.0%
!! GAGATGCTAACGAGTGCCGG+GGG - chr1_2:7298350-7298369 None:intergenic 60.0%
! GGAGATGCTAACGAGTGCCG+GGG - chr1_2:7298351-7298370 None:intergenic 60.0%
GGGAGATGCTAACGAGTGCC+GGG - chr1_2:7298352-7298371 None:intergenic 60.0%
GTGCCCCGGGACACTCTTTA+AGG + chr1_2:7298877-7298896 Msa0052930:intron 60.0%
!! AGGCCCTTAAAGAGTGCCCC+GGG + chr1_2:7298992-7299011 Msa0052930:intron 60.0%
!! GGAGAACTCCCCGACTTGGT+TGG + chr1_2:7299049-7299068 Msa0052930:intron 60.0%
CCGACCCCAAAATGCCAAGG+AGG - chr1_2:7299921-7299940 None:intergenic 60.0%
TGGCCGACCCCAAAATGCCA+AGG - chr1_2:7299924-7299943 None:intergenic 60.0%
GGGGAACCCAGGGATCATCA+CGG - chr1_2:7300814-7300833 None:intergenic 60.0%
TGGGTCATGAGGGGAACCCA+GGG - chr1_2:7300824-7300843 None:intergenic 60.0%
TTGGGTCATGAGGGGAACCC+AGG - chr1_2:7300825-7300844 None:intergenic 60.0%
CGTCCTCTTCCGTATGGACC+AGG - chr1_2:7301222-7301241 None:intergenic 60.0%
GGGGCCCATCCAGCTACATT+TGG + chr1_2:7301486-7301505 Msa0052930:CDS 60.0%
!! GTGCCGGGGGCACTCTTCAA+TGG - chr1_2:7298337-7298356 None:intergenic 65.0%
!! GGCCCTTAAAGAGTGCCCCG+GGG + chr1_2:7298993-7299012 Msa0052930:intron 65.0%
!! GCCCTTAAAGAGTGCCCCGG+GGG + chr1_2:7298994-7299013 Msa0052930:intron 65.0%
! GCCCCCGGGGCACTCTTTAA+GGG - chr1_2:7298998-7299017 None:intergenic 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG - chr1_2:7298999-7299018 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 7295270 7301908 7295270 ID=Msa0052930;Name=Msa0052930
chr1_2 mRNA 7295270 7301908 7295270 ID=Msa0052930-mRNA-1;Parent=Msa0052930;Name=Msa0052930-mRNA-1;_AED=0.00;_eAED=0.00;_QI=390|1|1|1|1|1|2|234|376
chr1_2 exon 7295270 7296148 7295270 ID=Msa0052930-mRNA-1:exon:2461;Parent=Msa0052930-mRNA-1
chr1_2 exon 7301033 7301908 7301033 ID=Msa0052930-mRNA-1:exon:2462;Parent=Msa0052930-mRNA-1
chr1_2 five_prime_UTR 7295270 7295659 7295270 ID=Msa0052930-mRNA-1:five_prime_utr;Parent=Msa0052930-mRNA-1
chr1_2 CDS 7295660 7296148 7295660 ID=Msa0052930-mRNA-1:cds;Parent=Msa0052930-mRNA-1
chr1_2 CDS 7301033 7301674 7301033 ID=Msa0052930-mRNA-1:cds;Parent=Msa0052930-mRNA-1
chr1_2 three_prime_UTR 7301675 7301908 7301675 ID=Msa0052930-mRNA-1:three_prime_utr;Parent=Msa0052930-mRNA-1
Gene Sequence

>Msa0052930

ATGCAATCGAGGGCTTTGGCATCTGAAGAAGGAAAATCAAAAGGGTTATCATTAAGATCACTGCGTTTACTTGTTGTTTTCCTTGCACTATGTGTTGTGTTTTCTGTCATAAGCGTATACACAATTAAGCATTTTGGAATTCAGAGTGTGGTTACTACAATGAGTTCAAGTTTTCAACCATGCGTTGAAGAACGTGCTGGTTTGGAACAATGGATTAAACCTCCTTCAAATCTGATCCATAATATGAGTGATAAAGAACTTCTTTGGAGAGCTTCTTTGGTTCCTAAGATTAAGAATTACCCTTTTGAAAGAGTTCCTAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCTGTTTGGGAGAGGTTTCTGAAAGGGCATGAGAGTCGTTATAGTGTGTATGTTCATCCAACTCCTTCTTATCAAGCCAAGTTTCCTCCTTCATCTGTTTTTTATAAGAGACAAATCCCTAGTCAGATTGCTGAGTGGGGAAGGATGAGCATGTGCGACGCCGAAAGAAGACTACTTGCTAATGCATTACTTGACATCTCCAATGAGCGTTTTATTCTATTGTCCGAATCATGTATCCCTCTCTACAAATTCAGTCTAGTCTACAACTATTTAATGAAATCCAAATTCAGCTTCGTCGGTGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTACAACCCAAACATGGCCCCTCTAGTCAACGTTACAAAATGGCGTAAAGGCTCTCAATGGTTCGAAGTAAATCGCAAGCTTGCCGTCCATATTGTGGAAGACACCGCATTTTATCCTAAGTTCGAACAATACTGTAGACCGGCTTGTTATGTCGACGAGCACTATTTTCCAACCATGTTAACCATTCAAGCGGGGAGTGTGTTGGCAAATCGGAGCATAACTTGGGTGGATTGGTCTAGAGGTGGGGCCCATCCAGCTACATTTGGAAAAACAGATATTACAAAGGAGTTTTTTGATAGAGTTCGTGGAGGTCAAAAATGCCTGTATAACAATAGAAACTCTACGCTTTGTTCTCTTTTTGCAAGAAAATTTGCTCCTAGTGCCTTGGAACCTTTGTTAGATATGGTGAATTCAAAAGTCTTAGACTTCTGA
Protein sequence

>Msa0052930

MQSRALASEEGKSKGLSLRSLRLLVVFLALCVVFSVISVYTIKHFGIQSVVTTMSSSFQPCVEERAGLEQWIKPPSNLIHNMSDKELLWRASLVPKIKNYPFERVPKIAFMFLTKGPLPLAPVWERFLKGHESRYSVYVHPTPSYQAKFPPSSVFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNERFILLSESCIPLYKFSLVYNYLMKSKFSFVGAFDDPGPYGRGRYNPNMAPLVNVTKWRKGSQWFEVNRKLAVHIVEDTAFYPKFEQYCRPACYVDEHYFPTMLTIQAGSVLANRSITWVDWSRGGAHPATFGKTDITKEFFDRVRGGQKCLYNNRNSTLCSLFARKFAPSALEPLLDMVNSKVLDF*