AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0148530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148530 MtrunA17_Chr1g0151841 96.286 377 13 1 1 376 1 377 0.0 757
Msa0148530 MtrunA17_Chr8g0341461 68.155 336 103 2 35 369 75 407 1.54e-177 499
Msa0148530 MtrunA17_Chr1g0209531 56.190 315 134 4 63 376 82 393 7.05e-133 386
Msa0148530 MtrunA17_Chr2g0276861 58.086 303 125 2 75 376 137 438 4.94e-132 385
Msa0148530 MtrunA17_Chr5g0423131 49.856 347 166 3 26 366 37 381 1.29e-126 369
Msa0148530 MtrunA17_Chr6g0484141 52.532 316 148 2 52 366 96 410 1.63e-124 365
Msa0148530 MtrunA17_Chr5g0394961 54.485 301 135 2 67 366 113 412 7.46e-122 358
Msa0148530 MtrunA17_Chr3g0136091 49.834 301 131 4 67 366 103 384 2.20e-105 315
Msa0148530 MtrunA17_Chr4g0073871 57.353 204 87 0 163 366 9 212 4.83e-89 267
Msa0148530 MtrunA17_Chr5g0394981 55.882 204 90 0 163 366 2 205 4.66e-85 257
Msa0148530 MtrunA17_Chr3g0138871 39.692 325 170 5 75 376 60 381 1.03e-79 249
Msa0148530 MtrunA17_Chr1g0148241 38.356 365 196 7 25 366 32 390 6.55e-77 243
Msa0148530 MtrunA17_Chr4g0071911 43.706 286 137 5 107 371 108 390 2.48e-75 238
Msa0148530 MtrunA17_Chr2g0298501 42.361 288 141 5 106 371 105 389 1.43e-72 231
Msa0148530 MtrunA17_Chr2g0298511 41.115 287 145 4 106 371 97 380 9.96e-72 229
Msa0148530 MtrunA17_Chr8g0384601 37.049 305 147 8 106 368 55 356 2.06e-54 183
Msa0148530 MtrunA17_Chr2g0289021 37.855 317 153 10 91 366 46 359 1.63e-53 181
Msa0148530 MtrunA17_Chr1g0170231 34.828 290 159 7 106 374 63 343 1.15e-47 165
Msa0148530 MtrunA17_Chr3g0137661 34.520 281 171 7 107 374 95 375 9.89e-41 147
Msa0148530 MtrunA17_Chr1g0170151 35.211 284 154 9 106 369 64 337 4.22e-38 139
Msa0148530 MtrunA17_Chr2g0322161 33.667 300 156 11 107 374 78 366 1.65e-36 136
Msa0148530 MtrunA17_Chr5g0394971 57.471 87 36 1 79 164 1 87 1.51e-30 112
Msa0148530 MtrunA17_Chr4g0073881 51.000 100 47 2 67 165 112 210 1.58e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148530 AT5G11730.1 67.183 387 115 3 1 376 1 386 0.0 536
Msa0148530 AT5G25970.1 64.987 377 121 1 3 368 4 380 1.20e-180 507
Msa0148530 AT5G25970.2 64.987 377 121 1 3 368 4 380 1.20e-180 507
Msa0148530 AT5G25970.3 64.987 377 121 1 3 368 4 380 1.20e-180 507
Msa0148530 AT3G21310.1 62.974 343 121 3 35 376 46 383 1.70e-161 458
Msa0148530 AT3G21310.3 62.974 343 121 3 35 376 46 383 1.70e-161 458
Msa0148530 AT1G51770.1 59.827 346 131 3 35 376 51 392 2.07e-157 449
Msa0148530 AT1G51770.2 55.043 347 121 4 34 376 50 365 1.42e-138 400
Msa0148530 AT1G10280.1 56.113 319 137 3 59 376 96 412 3.48e-132 385
Msa0148530 AT1G68390.1 54.167 312 140 2 67 376 98 408 2.84e-126 369
Msa0148530 AT5G16170.1 53.094 307 126 2 78 366 94 400 5.94e-118 348
Msa0148530 AT1G10880.1 52.759 290 132 2 81 368 93 379 6.07e-116 342
Msa0148530 AT1G68380.1 47.324 355 171 8 26 370 39 387 1.35e-108 324
Msa0148530 AT1G73810.1 50.492 305 145 3 70 371 113 414 4.59e-107 321
Msa0148530 AT3G21310.2 61.905 210 75 2 35 243 46 251 2.53e-90 273
Msa0148530 AT4G31350.4 43.878 294 139 5 96 366 76 366 1.92e-80 251
Msa0148530 AT4G31350.1 43.878 294 139 5 96 366 76 366 1.92e-80 251
Msa0148530 AT4G31350.2 43.878 294 139 5 96 366 76 366 1.92e-80 251
Msa0148530 AT4G30060.2 38.005 371 193 10 24 371 36 392 2.52e-76 241
Msa0148530 AT4G30060.1 38.005 371 193 10 24 371 36 392 2.52e-76 241
Msa0148530 AT4G31350.3 43.197 294 136 6 96 366 76 361 4.24e-76 240
Msa0148530 AT2G19160.2 37.634 372 187 13 24 368 33 386 7.70e-74 235
Msa0148530 AT2G19160.1 37.634 372 187 13 24 368 33 386 7.70e-74 235
Msa0148530 AT4G25870.1 38.854 314 165 6 79 368 70 380 1.83e-72 231
Msa0148530 AT5G57270.3 36.000 375 208 9 17 368 14 379 1.24e-70 226
Msa0148530 AT5G57270.1 36.000 375 208 9 17 368 14 379 1.24e-70 226
Msa0148530 AT5G57270.4 36.000 375 208 9 17 368 14 379 1.24e-70 226
Msa0148530 AT5G57270.5 36.000 375 208 9 17 368 14 379 1.24e-70 226
Msa0148530 AT5G57270.2 36.000 375 208 9 17 368 14 379 1.24e-70 226
Msa0148530 AT5G14550.2 40.310 258 132 6 97 335 55 309 7.78e-57 189
Msa0148530 AT5G14550.3 37.342 316 153 8 97 370 55 367 1.41e-56 189
Msa0148530 AT5G14550.1 37.025 316 153 9 97 369 55 367 2.41e-56 189
Msa0148530 AT5G25330.1 34.973 366 216 12 24 375 4 361 2.81e-50 172
Msa0148530 AT1G62305.1 36.190 315 155 10 92 366 56 364 9.65e-50 172
Msa0148530 AT1G11940.1 36.149 296 146 8 106 361 73 365 3.53e-49 170
Msa0148530 AT3G52060.1 34.409 279 163 8 106 373 74 343 2.24e-48 167
Msa0148530 AT5G14550.4 36.149 296 157 8 97 370 55 340 1.43e-45 160
Msa0148530 AT1G62305.3 41.304 230 107 7 92 299 56 279 3.41e-45 158
Msa0148530 AT1G11940.2 43.258 178 94 4 106 279 73 247 2.89e-40 144
Msa0148530 AT5G22070.1 33.445 299 159 9 107 374 71 360 1.01e-39 145
Msa0148530 AT4G32290.1 33.242 364 208 11 31 375 31 378 2.99e-37 139
Msa0148530 AT1G62305.2 32.381 315 143 11 92 366 56 340 2.05e-35 133

Find 110 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTACAAATGAGCTTAT+TGG 0.154481 1_4:+8880284 Msa0148530:three_prime_UTR
ATAAAATGGCGTTAAATTTA+TGG 0.158413 1_4:-8873884 None:intergenic
GATCAAATATTTAATGTAAA+TGG 0.200317 1_4:-8873919 None:intergenic
TGCACCGACGAAGCTGAATT+TGG 0.205834 1_4:-8879622 None:intergenic
TATGAAAGATCAAATTATTA+AGG 0.209862 1_4:-8873951 None:intergenic
GTTCTTTATCACTCATATTA+TGG 0.210415 1_4:-8874332 None:intergenic
CATTGCCTCTTGCACCTGTT+TGG 0.243558 1_4:+8874445 Msa0148530:CDS
ACTTCTTTGGAGAGCTTCTT+TGG 0.250935 1_4:+8874353 Msa0148530:CDS
AAAGGGTAATTCTTAATCTT+AGG 0.260696 1_4:-8874378 None:intergenic
GTATACACAATTAAGCATTT+TGG 0.282389 1_4:+8874210 Msa0148530:CDS
TGAGTGATAAAGAACTTCTT+TGG 0.293369 1_4:+8874340 Msa0148530:CDS
ATTGCCTCTTGCACCTGTTT+GGG 0.296741 1_4:+8874446 Msa0148530:CDS
GGAGTAATAAATGCATAAAA+TGG 0.319411 1_4:-8873898 None:intergenic
ATGGTAACCACCCTCTATTA+AGG 0.319959 1_4:-8873976 None:intergenic
TAGAGTTTCTATTGTTATAC+AGG 0.336336 1_4:-8879998 None:intergenic
CTTGGAACCTTTGTTAGATA+TGG 0.338936 1_4:+8880061 Msa0148530:CDS
AGGAACATAAAAGCAATCTT+AGG 0.357395 1_4:-8874411 None:intergenic
ATGCGGTGTCTTCCACAATA+TGG 0.362225 1_4:-8879764 None:intergenic
CTCTAGTCAACGTTACAAAA+TGG 0.364473 1_4:+8879697 Msa0148530:CDS
AGAATGAATGAAACTTTATA+TGG 0.376699 1_4:-8873995 None:intergenic
CGTTGAAGAACGTGCTGGTT+TGG 0.378429 1_4:+8874278 Msa0148530:CDS
ATGAAAGATCAAATTATTAA+GGG 0.384476 1_4:-8873950 None:intergenic
TGGCATGGTGATTGCCTCAT+TGG 0.392310 1_4:+8880200 Msa0148530:three_prime_UTR
ATCTTAGGAACTCTTTCAAA+AGG 0.395819 1_4:-8874396 None:intergenic
CTACAGTATTGTTCGAACTT+AGG 0.401155 1_4:-8879792 None:intergenic
ATTAGCAAGTAGTCTTCTTT+CGG 0.401766 1_4:-8879502 None:intergenic
GTCGGTGCATTTGATGATCC+TGG 0.408642 1_4:+8879636 Msa0148530:CDS
CTCTTGCACCTGTTTGGGAG+AGG 0.412242 1_4:+8874451 Msa0148530:CDS
CAACACACTCCCCGCTTGAA+TGG 0.413577 1_4:-8879859 None:intergenic
TCTTGTTCAGATTGCTGAGT+GGG 0.414497 1_4:+8879458 Msa0148530:intron
GGGTGGATTGGTCTAGAGGT+GGG 0.417834 1_4:+8879901 Msa0148530:CDS
CAAGATGCAATCGAGGGCTT+TGG 0.417995 1_4:+8874092 Msa0148530:exon
GGCGTTAAATTTATGGTCTA+CGG 0.420625 1_4:-8873877 None:intergenic
GGGGCCCATCCAGCTACATT+TGG 0.423319 1_4:+8879921 Msa0148530:CDS
TTCAGAAACCTCTCCCAAAC+AGG 0.428489 1_4:-8874459 None:intergenic
CGGGGAGTGTGTTGGCAAAT+CGG 0.432852 1_4:+8879868 Msa0148530:CDS
TGGCAAATCGGAGCATAACT+TGG 0.433668 1_4:+8879880 Msa0148530:CDS
CACTACAATAAAACAAGCTA+TGG 0.438371 1_4:-8873831 None:intergenic
TCTGAAGAAGGAAAATCAAA+AGG 0.438585 1_4:+8874117 Msa0148530:CDS
TGGTAACCACCCTCTATTAA+GGG 0.441814 1_4:-8873975 None:intergenic
ATCGAAGTTGTAGACTATGC+TGG 0.455602 1_4:-8873803 None:intergenic
CAAAATATACATACCTGACT+AGG 0.457704 1_4:-8874576 None:intergenic
AACAGATGAAGGAGGAAACT+TGG 0.460141 1_4:-8874535 None:intergenic
GGTTGGGGAGAACAAGATTA+TGG 0.462623 1_4:-8873760 None:intergenic
AAAATTTGCTCCTAGTGCCT+TGG 0.467657 1_4:+8880043 Msa0148530:CDS
CAATAGAATAAACCGCTCAT+TGG 0.469034 1_4:-8879541 None:intergenic
GGAAACTTGGCTTGATAAGA+AGG 0.470311 1_4:-8874522 None:intergenic
TAAGAGACAAATCCCTAGTC+AGG 0.472658 1_4:+8874563 Msa0148530:CDS
GGAGCATAACTTGGGTGGAT+TGG 0.479204 1_4:+8879889 Msa0148530:CDS
GCTTGAATGGTTAACATGGT+TGG 0.484426 1_4:-8879846 None:intergenic
AACGTGCTGGTTTGGAACAA+TGG 0.490018 1_4:+8874286 Msa0148530:CDS
TCTTTCATAACCCTTAATAG+AGG 0.493403 1_4:+8873965 Msa0148530:five_prime_UTR
TTGGCTTGATAAGAAGGAGT+TGG 0.500843 1_4:-8874516 None:intergenic
CGTCCTCTTCCGTATGGACC+AGG 0.503162 1_4:-8879654 None:intergenic
TTTGGGAGAGGTTTCTGAAA+GGG 0.509717 1_4:+8874463 Msa0148530:CDS
GTAGAGAGGGATACATGATT+CGG 0.512493 1_4:-8879565 None:intergenic
GAGGCAATGGTCCTTTAGTA+AGG 0.515491 1_4:-8874431 None:intergenic
CTAGACTGAATTTGTAGAGA+GGG 0.522832 1_4:-8879578 None:intergenic
ATATTATGGATCAGATTTGA+AGG 0.522939 1_4:-8874318 None:intergenic
TGGGTGGATTGGTCTAGAGG+TGG 0.535618 1_4:+8879900 Msa0148530:CDS
TCTTAGGAACTCTTTCAAAA+GGG 0.537953 1_4:-8874395 None:intergenic
TTCAGATTGCTGAGTGGGGA+AGG 0.538958 1_4:+8879463 Msa0148530:intron
CTCTCCCAAACAGGTGCAAG+AGG 0.544373 1_4:-8874450 None:intergenic
CTCAAAAGTTATGAAAATTG+AGG 0.546705 1_4:-8880253 None:intergenic
AACGTTACAAAATGGCGTAA+AGG 0.547258 1_4:+8879705 Msa0148530:CDS
TCGAAGTTGTAGACTATGCT+GGG 0.549060 1_4:-8873802 None:intergenic
ACCATGTTAACCATTCAAGC+GGG 0.549181 1_4:+8879849 Msa0148530:CDS
TTGTAGCGTCCTCTTCCGTA+TGG 0.550327 1_4:-8879660 None:intergenic
CATATCTAACAAAGGTTCCA+AGG 0.551048 1_4:-8880060 None:intergenic
CTGAAGAAGGAAAATCAAAA+GGG 0.552666 1_4:+8874118 Msa0148530:CDS
CAAGCTTGCCGTCCATATTG+TGG 0.554887 1_4:+8879752 Msa0148530:CDS
CTTGTTCAGATTGCTGAGTG+GGG 0.555008 1_4:+8879459 Msa0148530:intron
AGGGCTTTGGCATCTGAAGA+AGG 0.556245 1_4:+8874105 Msa0148530:CDS
TTTGATGATCCTGGTCCATA+CGG 0.557830 1_4:+8879645 Msa0148530:CDS
GATCCTGGTCCATACGGAAG+AGG 0.560466 1_4:+8879651 Msa0148530:CDS
AAATCCAAATTCAGCTTCGT+CGG 0.569207 1_4:+8879618 Msa0148530:CDS
ATGGTGATTGCCTCATTGGA+TGG 0.570076 1_4:+8880204 Msa0148530:three_prime_UTR
GGTGGATTGGTCTAGAGGTG+GGG 0.570596 1_4:+8879902 Msa0148530:CDS
AATGGCGTAAAGGCTCTCAA+TGG 0.571190 1_4:+8879715 Msa0148530:CDS
CAAACAGGTGCAAGAGGCAA+TGG 0.572308 1_4:-8874444 None:intergenic
CATTCAAGCGGGGAGTGTGT+TGG 0.572448 1_4:+8879860 Msa0148530:CDS
ACTTGGGTGGATTGGTCTAG+AGG 0.573299 1_4:+8879897 Msa0148530:CDS
CCCCGCTTGAATGGTTAACA+TGG 0.575864 1_4:-8879850 None:intergenic
CTTTCATAACCCTTAATAGA+GGG 0.580391 1_4:+8873966 Msa0148530:five_prime_UTR
CCAGCACGTTCTTCAACGCA+TGG 0.586978 1_4:-8874273 None:intergenic
AACCATGTTAACCATTCAAG+CGG 0.590819 1_4:+8879848 Msa0148530:CDS
CCATGCGTTGAAGAACGTGC+TGG 0.593014 1_4:+8874273 Msa0148530:CDS
AAAATATACATACCTGACTA+GGG 0.593555 1_4:-8874575 None:intergenic
GAATTCACCATATCTAACAA+AGG 0.595366 1_4:-8880068 None:intergenic
GTTTGGGAGAGGTTTCTGAA+AGG 0.596050 1_4:+8874462 Msa0148530:CDS
TTCTTGTTCAGATTGCTGAG+TGG 0.597688 1_4:+8879457 Msa0148530:intron
GTTCGAACAATACTGTAGAC+CGG 0.597734 1_4:+8879797 Msa0148530:CDS
TCATAACCCTTAATAGAGGG+TGG 0.597941 1_4:+8873969 Msa0148530:five_prime_UTR
GGCAAATCGGAGCATAACTT+GGG 0.604748 1_4:+8879881 Msa0148530:CDS
AACAAAGGTTCCAAGGCACT+AGG 0.605399 1_4:-8880053 None:intergenic
TTTAAGCAAGATGCAATCGA+GGG 0.613015 1_4:+8874086 Msa0148530:exon
TACTTGACATCTCCAATGAG+CGG 0.613960 1_4:+8879529 Msa0148530:CDS
AAAACACAACACATAGTGCA+AGG 0.624692 1_4:-8874176 None:intergenic
GAGAACAAGATTATGGCACA+TGG 0.629394 1_4:-8873753 None:intergenic
TGCTCGTCGACATAACAAGC+CGG 0.649367 1_4:-8879816 None:intergenic
TTCGAACTTAGGATAAAATG+CGG 0.652612 1_4:-8879781 None:intergenic
ACTAGACTGAATTTGTAGAG+AGG 0.654314 1_4:-8879579 None:intergenic
AAATCGGAGCATAACTTGGG+TGG 0.655678 1_4:+8879884 Msa0148530:CDS
GGATGGTGAATGCTAGATGA+TGG 0.659665 1_4:+8880221 Msa0148530:three_prime_UTR
TTATGGATCAGATTTGAAGG+AGG 0.663245 1_4:-8874315 None:intergenic
GGTGTCTTCCACAATATGGA+CGG 0.663514 1_4:-8879760 None:intergenic
CTAGCATTCACCATCCAATG+AGG 0.673494 1_4:-8880214 None:intergenic
AGAACAAGATTATGGCACAT+GGG 0.685703 1_4:-8873752 None:intergenic
AGGACGCTACAACTCAAACA+TGG 0.687528 1_4:+8879671 Msa0148530:CDS
CCATGTTAACCATTCAAGCG+GGG 0.708045 1_4:+8879850 Msa0148530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAGAAATTTTATTATA+TGG + chr1_4:8880175-8880194 Msa0148530:three_prime_UTR 10.0%
!! GATCAAATATTTAATGTAAA+TGG - chr1_4:8873922-8873941 None:intergenic 15.0%
!! ATGAAAGATCAAATTATTAA+GGG - chr1_4:8873953-8873972 None:intergenic 15.0%
!! TATGAAAGATCAAATTATTA+AGG - chr1_4:8873954-8873973 None:intergenic 15.0%
!!! AGATAATTTTTGTTTATTTG+AGG + chr1_4:8874061-8874080 Msa0148530:five_prime_UTR 15.0%
!! AGAAGTTAATAATGTTTAAT+TGG + chr1_4:8874651-8874670 Msa0148530:intron 15.0%
!! ATAAATAAATACATATCACT+TGG + chr1_4:8875827-8875846 Msa0148530:intron 15.0%
!!! CTTTAATAATTTAAGGTTTT+AGG - chr1_4:8875868-8875887 None:intergenic 15.0%
!! CTAAAACCTTAAATTATTAA+AGG + chr1_4:8875866-8875885 Msa0148530:intron 15.0%
!!! AATTAGTTTTACAAGTTTAT+AGG + chr1_4:8876567-8876586 Msa0148530:intron 15.0%
!!! ATTAGTTTTACAAGTTTATA+GGG + chr1_4:8876568-8876587 Msa0148530:intron 15.0%
!! TCATAAAAACTTACTATTTA+AGG + chr1_4:8877407-8877426 Msa0148530:intron 15.0%
!!! ATTTTTTTTTGAAGAAAAAC+TGG - chr1_4:8878916-8878935 None:intergenic 15.0%
!! ATAAAATGGCGTTAAATTTA+TGG - chr1_4:8873887-8873906 None:intergenic 20.0%
!! AGAATGAATGAAACTTTATA+TGG - chr1_4:8873998-8874017 None:intergenic 20.0%
!!! AGGTTTTGATGAATTTTTTT+GGG + chr1_4:8874748-8874767 Msa0148530:intron 20.0%
!! TATATAGTATTGTCAAATAG+CGG - chr1_4:8874946-8874965 None:intergenic 20.0%
!!! AAAACATTTAGGTTTATGTA+AGG + chr1_4:8875123-8875142 Msa0148530:intron 20.0%
!!! AAACATTTAGGTTTATGTAA+GGG + chr1_4:8875124-8875143 Msa0148530:intron 20.0%
!! TTATGCAAAGTTATATTGTA+AGG + chr1_4:8875364-8875383 Msa0148530:intron 20.0%
!! TATGCAAAGTTATATTGTAA+GGG + chr1_4:8875365-8875384 Msa0148530:intron 20.0%
!! TATTAATAGCTTAAGCATAT+AGG - chr1_4:8875698-8875717 None:intergenic 20.0%
!! ATGCTTAAGCTATTAATATA+CGG + chr1_4:8875700-8875719 Msa0148530:intron 20.0%
!! ACTTAATTTATCATTTGATG+CGG - chr1_4:8875782-8875801 None:intergenic 20.0%
!!! AAATTAAGTTGTGAAGAATA+AGG + chr1_4:8875793-8875812 Msa0148530:intron 20.0%
!!! AATTAAGTTGTGAAGAATAA+GGG + chr1_4:8875794-8875813 Msa0148530:intron 20.0%
!! TTCATGCCTTTAATAATTTA+AGG - chr1_4:8875875-8875894 None:intergenic 20.0%
!!! CTTTAACAATTTAAGCTTTT+AGG - chr1_4:8876541-8876560 None:intergenic 20.0%
!! CTAAAAGCTTAAATTGTTAA+AGG + chr1_4:8876539-8876558 Msa0148530:intron 20.0%
!!! TCTAGCTTAAAATATCATTT+AGG + chr1_4:8877100-8877119 Msa0148530:intron 20.0%
!! CTAGCTTAAAATATCATTTA+GGG + chr1_4:8877101-8877120 Msa0148530:intron 20.0%
!! AATACTAAAACATTGTCATT+TGG + chr1_4:8877132-8877151 Msa0148530:intron 20.0%
!! AATACTAAAACATTGTCATT+TGG + chr1_4:8877132-8877151 Msa0148530:intron 20.0%
!!! TGATAGTCGTTTATTTTTAT+AGG + chr1_4:8879316-8879335 Msa0148530:intron 20.0%
!!! AGAAATTTTATTATATGGCA+TGG + chr1_4:8880180-8880199 Msa0148530:three_prime_UTR 20.0%
! GGAGTAATAAATGCATAAAA+TGG - chr1_4:8873901-8873920 None:intergenic 25.0%
!! GTATACACAATTAAGCATTT+TGG + chr1_4:8874210-8874229 Msa0148530:CDS 25.0%
! ATATTATGGATCAGATTTGA+AGG - chr1_4:8874321-8874340 None:intergenic 25.0%
! GTTCTTTATCACTCATATTA+TGG - chr1_4:8874335-8874354 None:intergenic 25.0%
! AAAGGGTAATTCTTAATCTT+AGG - chr1_4:8874381-8874400 None:intergenic 25.0%
! TTATAAAAAACAGATGAAGG+AGG - chr1_4:8874546-8874565 None:intergenic 25.0%
! CTCTTATAAAAAACAGATGA+AGG - chr1_4:8874549-8874568 None:intergenic 25.0%
! AAAATATACATACCTGACTA+GGG - chr1_4:8874578-8874597 None:intergenic 25.0%
!!! GAGGTTTTGATGAATTTTTT+TGG + chr1_4:8874747-8874766 Msa0148530:intron 25.0%
!!! TTTTTTTGGGTTATAGATTG+TGG + chr1_4:8874761-8874780 Msa0148530:intron 25.0%
!! TGAGAATATAACATGCTTTT+GGG + chr1_4:8875223-8875242 Msa0148530:intron 25.0%
! TACGCAGAAAATGATAAAAA+GGG - chr1_4:8875340-8875359 None:intergenic 25.0%
! TTACGCAGAAAATGATAAAA+AGG - chr1_4:8875341-8875360 None:intergenic 25.0%
!!! ATTTACTTTTACTGCATGTT+CGG + chr1_4:8875578-8875597 Msa0148530:intron 25.0%
! AACTCGTTGTGATTAAATTA+CGG + chr1_4:8875651-8875670 Msa0148530:intron 25.0%
!! AAGGCATGAAATTAGTTTAA+AGG + chr1_4:8875885-8875904 Msa0148530:intron 25.0%
!! AGGCATGAAATTAGTTTAAA+GGG + chr1_4:8875886-8875905 Msa0148530:intron 25.0%
! AACGAGATATCAGAAATATT+AGG - chr1_4:8875940-8875959 None:intergenic 25.0%
!!! ATTGACTTTTGTGAAATGTT+AGG - chr1_4:8875982-8876001 None:intergenic 25.0%
! ATTAGAATTCTAACAGAATC+TGG + chr1_4:8876088-8876107 Msa0148530:intron 25.0%
! ACTTAATAGCTTAAGTTTAG+AGG - chr1_4:8876171-8876190 None:intergenic 25.0%
! AAACTTAAGCTATTAAGTGA+AGG + chr1_4:8876173-8876192 Msa0148530:intron 25.0%
! ATATTAACCTGTGAAGAATA+AGG + chr1_4:8876265-8876284 Msa0148530:intron 25.0%
! AGATATCTGGATATATATTG+TGG - chr1_4:8876609-8876628 None:intergenic 25.0%
! AATCACTTTAACAAGATATC+TGG - chr1_4:8876622-8876641 None:intergenic 25.0%
! ATTTACATATGTGGAATCTT+AGG - chr1_4:8876655-8876674 None:intergenic 25.0%
!! TCTCCATATTTTATCTCAAT+GGG - chr1_4:8876807-8876826 None:intergenic 25.0%
!! TTCTCCATATTTTATCTCAA+TGG - chr1_4:8876808-8876827 None:intergenic 25.0%
!! ATTAGAGTTCTAACAGAATT+TGG + chr1_4:8876966-8876985 Msa0148530:intron 25.0%
! AATCACTTTAACAAGATATC+TGG - chr1_4:8876622-8876641 None:intergenic 25.0%
! ATTTACATATGTGGAATCTT+AGG - chr1_4:8876655-8876674 None:intergenic 25.0%
! ATTTCCCATTGAGATAAATA+TGG + chr1_4:8877463-8877482 Msa0148530:intron 25.0%
! TTCTCCATATTTATCTCAAT+GGG - chr1_4:8877470-8877489 None:intergenic 25.0%
!! ATTAGAGTTCTAACAGAATT+TGG + chr1_4:8876966-8876985 Msa0148530:intron 25.0%
!! TCTAGCTTACAATATCATTT+CGG + chr1_4:8877762-8877781 Msa0148530:intron 25.0%
! AATGTAACAGCTAAATGATA+AGG + chr1_4:8877944-8877963 Msa0148530:intron 25.0%
!!! AGGTTCTCAACTATTTTAAT+AGG - chr1_4:8878064-8878083 None:intergenic 25.0%
! TTAATCTGTGTTATCAATCT+TGG - chr1_4:8878396-8878415 None:intergenic 25.0%
! TTGAATATTTATTGTGCATG+TGG + chr1_4:8878438-8878457 Msa0148530:intron 25.0%
! TTGAATATTTATTGTGCATG+TGG + chr1_4:8878438-8878457 Msa0148530:intron 25.0%
! CAATTATCTGATAAAGATAC+TGG - chr1_4:8878947-8878966 None:intergenic 25.0%
!!! TTCTCGAGTTATTGTTATTT+CGG + chr1_4:8879081-8879100 Msa0148530:intron 25.0%
! TGCTTAGGTTTATGTTAATA+TGG + chr1_4:8879406-8879425 Msa0148530:intron 25.0%
! TGGAAAAACAGATATTACAA+AGG + chr1_4:8879941-8879960 Msa0148530:CDS 25.0%
! TAGAGTTTCTATTGTTATAC+AGG - chr1_4:8880001-8880020 None:intergenic 25.0%
! CTCAAAAGTTATGAAAATTG+AGG - chr1_4:8880256-8880275 None:intergenic 25.0%
! CAAAATGAAGACTTTTCTGA+AGG - chr1_4:8873725-8873744 None:intergenic 30.0%
! ACTTTTGAATATATGGGGTT+GGG - chr1_4:8873779-8873798 None:intergenic 30.0%
! AACTTTTGAATATATGGGGT+TGG - chr1_4:8873780-8873799 None:intergenic 30.0%
! GGTCAACTTTTGAATATATG+GGG - chr1_4:8873784-8873803 None:intergenic 30.0%
! GGGTCAACTTTTGAATATAT+GGG - chr1_4:8873785-8873804 None:intergenic 30.0%
! TGGGTCAACTTTTGAATATA+TGG - chr1_4:8873786-8873805 None:intergenic 30.0%
CACTACAATAAAACAAGCTA+TGG - chr1_4:8873834-8873853 None:intergenic 30.0%
TCTTTCATAACCCTTAATAG+AGG + chr1_4:8873965-8873984 Msa0148530:five_prime_UTR 30.0%
CTTTCATAACCCTTAATAGA+GGG + chr1_4:8873966-8873985 Msa0148530:five_prime_UTR 30.0%
TCTGAAGAAGGAAAATCAAA+AGG + chr1_4:8874117-8874136 Msa0148530:CDS 30.0%
CTGAAGAAGGAAAATCAAAA+GGG + chr1_4:8874118-8874137 Msa0148530:CDS 30.0%
TGAGTGATAAAGAACTTCTT+TGG + chr1_4:8874340-8874359 Msa0148530:CDS 30.0%
TCTTAGGAACTCTTTCAAAA+GGG - chr1_4:8874398-8874417 None:intergenic 30.0%
ATCTTAGGAACTCTTTCAAA+AGG - chr1_4:8874399-8874418 None:intergenic 30.0%
AGGAACATAAAAGCAATCTT+AGG - chr1_4:8874414-8874433 None:intergenic 30.0%
! GCTTTTATGTTCCTTACTAA+AGG + chr1_4:8874420-8874439 Msa0148530:CDS 30.0%
CAAAATATACATACCTGACT+AGG - chr1_4:8874579-8874598 None:intergenic 30.0%
CCTCAAAACAATCATAAACA+AGG - chr1_4:8874731-8874750 None:intergenic 30.0%
!! CCTTGTTTATGATTGTTTTG+AGG + chr1_4:8874728-8874747 Msa0148530:intron 30.0%
AAGTTCCACTAAACTAATAG+CGG + chr1_4:8875006-8875025 Msa0148530:intron 30.0%
TCAAGTACAATGTTGTCAAA+TGG - chr1_4:8875042-8875061 None:intergenic 30.0%
TAGAACTACATAAGGAACTA+AGG + chr1_4:8875079-8875098 Msa0148530:intron 30.0%
AACTAAGGAAAGACTTATGA+GGG + chr1_4:8875094-8875113 Msa0148530:intron 30.0%
! GAGGGTATACAAAAACATTT+AGG + chr1_4:8875112-8875131 Msa0148530:intron 30.0%
! GTGAGAATATAACATGCTTT+TGG + chr1_4:8875222-8875241 Msa0148530:intron 30.0%
AGGAAAAAATAAGATCACTC+AGG + chr1_4:8875408-8875427 Msa0148530:intron 30.0%
GGAAAAAATAAGATCACTCA+GGG + chr1_4:8875409-8875428 Msa0148530:intron 30.0%
AAGTAATTGTTGCCTATTCA+TGG + chr1_4:8875466-8875485 Msa0148530:intron 30.0%
CAACGAGTTTGATGAAATAA+AGG - chr1_4:8875640-8875659 None:intergenic 30.0%
ACTCGTTGTGATTAAATTAC+GGG + chr1_4:8875652-8875671 Msa0148530:intron 30.0%
AATTTATCATTTGATGCGGT+GGG - chr1_4:8875778-8875797 None:intergenic 30.0%
TAATTTATCATTTGATGCGG+TGG - chr1_4:8875779-8875798 None:intergenic 30.0%
AAATATTAGGCTATGAACAG+AGG - chr1_4:8875927-8875946 None:intergenic 30.0%
ACCAATTGTTGACATAGTTA+AGG + chr1_4:8876032-8876051 Msa0148530:intron 30.0%
ACCTTAACTATGTCAACAAT+TGG - chr1_4:8876036-8876055 None:intergenic 30.0%
TAAAGTTAGTTAGTGCTTGT+AGG + chr1_4:8876059-8876078 Msa0148530:intron 30.0%
GCTTAAGTTTAGAGGAAATT+TGG - chr1_4:8876163-8876182 None:intergenic 30.0%
TATTAAGTGAAGGACATGAT+TGG + chr1_4:8876183-8876202 Msa0148530:intron 30.0%
GAGTTTCCAATATTGTGTAT+GGG + chr1_4:8876507-8876526 Msa0148530:intron 30.0%
TCTCCCATTGAGATAAAATA+TGG + chr1_4:8876801-8876820 Msa0148530:intron 30.0%
TAGTACTAGTTAGAGTTAGT+TGG + chr1_4:8876927-8876946 Msa0148530:intron 30.0%
GATGTAGGGAGAAAAAAATT+AGG + chr1_4:8877006-8877025 Msa0148530:intron 30.0%
! TAAAACATTGTCATTTGGTG+AGG + chr1_4:8877137-8877156 Msa0148530:intron 30.0%
GTTCTCCATATTTATCTCAA+TGG - chr1_4:8877471-8877490 None:intergenic 30.0%
TTAACTAAGTCAGCAATTGA+GGG - chr1_4:8877573-8877592 None:intergenic 30.0%
GATGTAGGGAGAAAAAAATT+AGG + chr1_4:8877006-8877025 Msa0148530:intron 30.0%
CTAGCTTACAATATCATTTC+GGG + chr1_4:8877763-8877782 Msa0148530:intron 30.0%
! TAAAACATTGTCATTTGGTG+AGG + chr1_4:8877137-8877156 Msa0148530:intron 30.0%
! CATTAAAACGTTGTCATTTC+AGG - chr1_4:8877909-8877928 None:intergenic 30.0%
!! TCTCGAGTTATTGTTATTTC+GGG + chr1_4:8879082-8879101 Msa0148530:intron 30.0%
ATTAGCAAGTAGTCTTCTTT+CGG - chr1_4:8879505-8879524 None:intergenic 30.0%
!! ATTTTGTAACGTTGACTAGA+GGG - chr1_4:8879698-8879717 None:intergenic 30.0%
TTCGAACTTAGGATAAAATG+CGG - chr1_4:8879784-8879803 None:intergenic 30.0%
GAATTCACCATATCTAACAA+AGG - chr1_4:8880071-8880090 None:intergenic 30.0%
! TTTTATTATATGGCATGGCA+TGG + chr1_4:8880185-8880204 Msa0148530:three_prime_UTR 30.0%
GAATGTACAAATGAGCTTAT+TGG + chr1_4:8880284-8880303 Msa0148530:three_prime_UTR 30.0%
AGAACAAGATTATGGCACAT+GGG - chr1_4:8873755-8873774 None:intergenic 35.0%
! CTTTTGAATATATGGGGTTG+GGG - chr1_4:8873778-8873797 None:intergenic 35.0%
GGCGTTAAATTTATGGTCTA+CGG - chr1_4:8873880-8873899 None:intergenic 35.0%
! TTTTAAGCAAGATGCAATCG+AGG + chr1_4:8874085-8874104 Msa0148530:exon 35.0%
TTTAAGCAAGATGCAATCGA+GGG + chr1_4:8874086-8874105 Msa0148530:exon 35.0%
AAAACACAACACATAGTGCA+AGG - chr1_4:8874179-8874198 None:intergenic 35.0%
TTATGGATCAGATTTGAAGG+AGG - chr1_4:8874318-8874337 None:intergenic 35.0%
GGCTGATATGCACTTTATTA+TGG + chr1_4:8874782-8874801 Msa0148530:intron 35.0%
! CTATACCGCTATTAGTTTAG+TGG - chr1_4:8875014-8875033 None:intergenic 35.0%
AGTACAATGTTGTCAAATGG+TGG - chr1_4:8875039-8875058 None:intergenic 35.0%
ATTGTACTTGATCAGTTCAC+CGG + chr1_4:8875051-8875070 Msa0148530:intron 35.0%
GAACTAAGGAAAGACTTATG+AGG + chr1_4:8875093-8875112 Msa0148530:intron 35.0%
TCGACGAGTTAAATTTCTCA+AGG + chr1_4:8875170-8875189 Msa0148530:intron 35.0%
CGACGAGTTAAATTTCTCAA+GGG + chr1_4:8875171-8875190 Msa0148530:intron 35.0%
ATAAGTGTGCAGAAACATGT+TGG + chr1_4:8875256-8875275 Msa0148530:intron 35.0%
ACGTATAATTAGGTCGTATG+TGG - chr1_4:8875286-8875305 None:intergenic 35.0%
CCAACTAGGTACGTATAATT+AGG - chr1_4:8875296-8875315 None:intergenic 35.0%
CCTAATTATACGTACCTAGT+TGG + chr1_4:8875293-8875312 Msa0148530:intron 35.0%
TGAATTTGCAACAACCAACT+AGG - chr1_4:8875310-8875329 None:intergenic 35.0%
CATGATACAAGTTTGAGAGA+AGG + chr1_4:8875388-8875407 Msa0148530:intron 35.0%
ATAAGATCACTCAGGGATTA+AGG + chr1_4:8875416-8875435 Msa0148530:intron 35.0%
ATTACTTCCATGTCTCTTCT+TGG - chr1_4:8875453-8875472 None:intergenic 35.0%
ACAGATAACAGACCATGAAT+AGG - chr1_4:8875481-8875500 None:intergenic 35.0%
GTCTGTTATCTGTTTGTAGA+GGG + chr1_4:8875488-8875507 Msa0148530:intron 35.0%
!! TGCACGTATTTTGGATTTCA+TGG + chr1_4:8875539-8875558 Msa0148530:intron 35.0%
!! GCACGTATTTTGGATTTCAT+GGG + chr1_4:8875540-8875559 Msa0148530:intron 35.0%
! TTTTGGATTTCATGGGAAGA+TGG + chr1_4:8875547-8875566 Msa0148530:intron 35.0%
! TTTTACTGCATGTTCGGATT+TGG + chr1_4:8875584-8875603 Msa0148530:intron 35.0%
CGAGTTTGATGAAATAAAGG+TGG - chr1_4:8875637-8875656 None:intergenic 35.0%
CTCGTTGTGATTAAATTACG+GGG + chr1_4:8875653-8875672 Msa0148530:intron 35.0%
GCTTAAGCATATAGGAAAGT+TGG - chr1_4:8875690-8875709 None:intergenic 35.0%
GCTATTAATATACGGACACA+TGG + chr1_4:8875708-8875727 Msa0148530:intron 35.0%
TTAATATACGGACACATGGT+TGG + chr1_4:8875712-8875731 Msa0148530:intron 35.0%
TAAGTTGTGAAGAATAAGGG+TGG + chr1_4:8875797-8875816 Msa0148530:intron 35.0%
CTTAAAAGTCTACAGCAAAC+AGG + chr1_4:8876004-8876023 Msa0148530:intron 35.0%
AATTCTAACAGAATCTGGCA+CGG + chr1_4:8876093-8876112 Msa0148530:intron 35.0%
AAAACTGTAGGGAGAAGATT+AGG + chr1_4:8876125-8876144 Msa0148530:intron 35.0%
CTGTGTATCATCACACTTTA+TGG - chr1_4:8876225-8876244 None:intergenic 35.0%
AGGTTAATATCAGCATGCAA+TGG - chr1_4:8876255-8876274 None:intergenic 35.0%
TAACCTGTGAAGAATAAGGA+TGG + chr1_4:8876269-8876288 Msa0148530:intron 35.0%
CGATAAGTGATTGACAACAT+TGG + chr1_4:8876459-8876478 Msa0148530:intron 35.0%
TGGTAGAAATTCAGATCACT+TGG + chr1_4:8876479-8876498 Msa0148530:intron 35.0%
AAATTCAGATCACTTGGTCA+AGG + chr1_4:8876485-8876504 Msa0148530:intron 35.0%
GGAGTTTCCAATATTGTGTA+TGG + chr1_4:8876506-8876525 Msa0148530:intron 35.0%
CCATGTCTCATTTACATATG+TGG - chr1_4:8876664-8876683 None:intergenic 35.0%
CCACATATGTAAATGAGACA+TGG + chr1_4:8876661-8876680 Msa0148530:intron 35.0%
! TTGAAATCCTTAAAGTGTCC+CGG - chr1_4:8876704-8876723 None:intergenic 35.0%
CTTAAAAGCCTACATCAAAC+AGG + chr1_4:8876876-8876895 Msa0148530:intron 35.0%
TTAACTAAGTCAGCAATTGG+GGG - chr1_4:8876905-8876924 None:intergenic 35.0%
CTTAACTAAGTCAGCAATTG+GGG - chr1_4:8876906-8876925 None:intergenic 35.0%
CCTTAACTAAGTCAGCAATT+GGG - chr1_4:8876907-8876926 None:intergenic 35.0%
ACCTTAACTAAGTCAGCAAT+TGG - chr1_4:8876908-8876927 None:intergenic 35.0%
!! TTTGACTTTTGACAACCTTG+CGG - chr1_4:8877032-8877051 None:intergenic 35.0%
AACAAGTTTGCAAGTAGACT+CGG + chr1_4:8877167-8877186 Msa0148530:intron 35.0%
! TTTCAAGTGGACTCTTATGA+TGG + chr1_4:8877194-8877213 Msa0148530:intron 35.0%
TCCACATATGTAAATGAGAC+AGG + chr1_4:8876660-8876679 Msa0148530:intron 35.0%
CCACATATGTAAATGAGACA+GGG + chr1_4:8876661-8876680 Msa0148530:intron 35.0%
CTTAAAAGCCTACATCAAAC+AGG + chr1_4:8876876-8876895 Msa0148530:intron 35.0%
CTTAACTAAGTCAGCAATTG+AGG - chr1_4:8876906-8876925 None:intergenic 35.0%
!! CTCAATTGCTGACTTAGTTA+AGG + chr1_4:8877572-8877591 Msa0148530:intron 35.0%
!! TAGAGTTAGTTTGTGCTTGT+AGG + chr1_4:8877599-8877618 Msa0148530:intron 35.0%
TCATAACCATATGAGTCTCT+AGG + chr1_4:8877723-8877742 Msa0148530:intron 35.0%
TTGATACCTAGAGACTCATA+TGG - chr1_4:8877732-8877751 None:intergenic 35.0%
! TGTCATTTGGTGAGGAAAAT+TGG + chr1_4:8877807-8877826 Msa0148530:intron 35.0%
AGTAGACTCAGATCATTTCA+AGG + chr1_4:8877841-8877860 Msa0148530:intron 35.0%
GGTTAATGTTTAGTGCACTA+TGG - chr1_4:8877972-8877991 None:intergenic 35.0%
ATACCTAAAATGCCCTTACT+AGG - chr1_4:8878038-8878057 None:intergenic 35.0%
!!! CTCTTTTTTTTACCTCATCG+TGG + chr1_4:8878166-8878185 Msa0148530:intron 35.0%
TCTGTGTTATCAATCTTGGA+TGG - chr1_4:8878392-8878411 None:intergenic 35.0%
!! TGTGTTTGTTGAGTTGAGAT+TGG + chr1_4:8878753-8878772 Msa0148530:intron 35.0%
!!! TGTTGAGTTGAGATTGGTTT+TGG + chr1_4:8878759-8878778 Msa0148530:intron 35.0%
!!! GAGATTGGTTTTGGTTCTTT+AGG + chr1_4:8878768-8878787 Msa0148530:intron 35.0%
!!! TTGGTTTTGGTTCTTTAGGA+TGG + chr1_4:8878772-8878791 Msa0148530:intron 35.0%
TTCATCACTTGTTCAAGCTA+AGG + chr1_4:8878842-8878861 Msa0148530:intron 35.0%
TCATCACTTGTTCAAGCTAA+GGG + chr1_4:8878843-8878862 Msa0148530:intron 35.0%
!! ACGCAAAAAGAGCATCTTTA+TGG - chr1_4:8878981-8879000 None:intergenic 35.0%
! GCTCTTTTTGCGTTAAGAAT+CGG + chr1_4:8878988-8879007 Msa0148530:intron 35.0%
TTAAGAATCGGTAAAGACTG+CGG + chr1_4:8879000-8879019 Msa0148530:intron 35.0%
TGCGGATATGAATAGCATTT+GGG + chr1_4:8879018-8879037 Msa0148530:intron 35.0%
GATATGAATAGCATTTGGGT+AGG + chr1_4:8879022-8879041 Msa0148530:intron 35.0%
ACACCATATCTTCACCATAT+GGG - chr1_4:8879196-8879215 None:intergenic 35.0%
! TTTTGTTGCAGTTCTCTGTT+GGG - chr1_4:8879278-8879297 None:intergenic 35.0%
! TTTTTGTTGCAGTTCTCTGT+TGG - chr1_4:8879279-8879298 None:intergenic 35.0%
CAATAGAATAAACCGCTCAT+TGG - chr1_4:8879544-8879563 None:intergenic 35.0%
CTAGACTGAATTTGTAGAGA+GGG - chr1_4:8879581-8879600 None:intergenic 35.0%
ACTAGACTGAATTTGTAGAG+AGG - chr1_4:8879582-8879601 None:intergenic 35.0%
AAATCCAAATTCAGCTTCGT+CGG + chr1_4:8879618-8879637 Msa0148530:CDS 35.0%
!! TTTTGTAACGTTGACTAGAG+GGG - chr1_4:8879697-8879716 None:intergenic 35.0%
!! CATTTTGTAACGTTGACTAG+AGG - chr1_4:8879699-8879718 None:intergenic 35.0%
CTCTAGTCAACGTTACAAAA+TGG + chr1_4:8879697-8879716 Msa0148530:CDS 35.0%
AACGTTACAAAATGGCGTAA+AGG + chr1_4:8879705-8879724 Msa0148530:CDS 35.0%
CTACAGTATTGTTCGAACTT+AGG - chr1_4:8879795-8879814 None:intergenic 35.0%
AACCATGTTAACCATTCAAG+CGG + chr1_4:8879848-8879867 Msa0148530:CDS 35.0%
! TTTTCCAAATGTAGCTGGAT+GGG - chr1_4:8879928-8879947 None:intergenic 35.0%
! TTTTTCCAAATGTAGCTGGA+TGG - chr1_4:8879929-8879948 None:intergenic 35.0%
!! TCTGTTTTTCCAAATGTAGC+TGG - chr1_4:8879933-8879952 None:intergenic 35.0%
!!! GAGTTTTTTGATAGAGTTCG+TGG + chr1_4:8879963-8879982 Msa0148530:CDS 35.0%
!!! TTTTTTGATAGAGTTCGTGG+AGG + chr1_4:8879966-8879985 Msa0148530:CDS 35.0%
CATATCTAACAAAGGTTCCA+AGG - chr1_4:8880063-8880082 None:intergenic 35.0%
CTTGGAACCTTTGTTAGATA+TGG + chr1_4:8880061-8880080 Msa0148530:CDS 35.0%
GAGAACAAGATTATGGCACA+TGG - chr1_4:8873756-8873775 None:intergenic 40.0%
TCGAAGTTGTAGACTATGCT+GGG - chr1_4:8873805-8873824 None:intergenic 40.0%
ATCGAAGTTGTAGACTATGC+TGG - chr1_4:8873806-8873825 None:intergenic 40.0%
TCATAACCCTTAATAGAGGG+TGG + chr1_4:8873969-8873988 Msa0148530:five_prime_UTR 40.0%
TGGTAACCACCCTCTATTAA+GGG - chr1_4:8873978-8873997 None:intergenic 40.0%
ATGGTAACCACCCTCTATTA+AGG - chr1_4:8873979-8873998 None:intergenic 40.0%
!!! GCATTTTGGAATTCAGAGTG+TGG + chr1_4:8874224-8874243 Msa0148530:CDS 40.0%
! ACTTCTTTGGAGAGCTTCTT+TGG + chr1_4:8874353-8874372 Msa0148530:CDS 40.0%
! TTTGGGAGAGGTTTCTGAAA+GGG + chr1_4:8874463-8874482 Msa0148530:CDS 40.0%
! TTGGCTTGATAAGAAGGAGT+TGG - chr1_4:8874519-8874538 None:intergenic 40.0%
! GGAAACTTGGCTTGATAAGA+AGG - chr1_4:8874525-8874544 None:intergenic 40.0%
AACAGATGAAGGAGGAAACT+TGG - chr1_4:8874538-8874557 None:intergenic 40.0%
TAAGAGACAAATCCCTAGTC+AGG + chr1_4:8874563-8874582 Msa0148530:CDS 40.0%
ACTCGTCATGTAACAATGAC+GGG - chr1_4:8874855-8874874 None:intergenic 40.0%
CACTCGTCATGTAACAATGA+CGG - chr1_4:8874856-8874875 None:intergenic 40.0%
TTGTACTTGATCAGTTCACC+GGG + chr1_4:8875052-8875071 Msa0148530:intron 40.0%
!! CTTATGTAGTTCTAGCAACC+CGG - chr1_4:8875073-8875092 None:intergenic 40.0%
GGTCTGTTATCTGTTTGTAG+AGG + chr1_4:8875487-8875506 Msa0148530:intron 40.0%
TGTTATCTGTTTGTAGAGGG+TGG + chr1_4:8875491-8875510 Msa0148530:intron 40.0%
GTTATCTGTTTGTAGAGGGT+GGG + chr1_4:8875492-8875511 Msa0148530:intron 40.0%
TTATCTGTTTGTAGAGGGTG+GGG + chr1_4:8875493-8875512 Msa0148530:intron 40.0%
TACGTGCAGATCATCCATTT+AGG - chr1_4:8875527-8875546 None:intergenic 40.0%
! TGGATGATCTGCACGTATTT+TGG + chr1_4:8875530-8875549 Msa0148530:intron 40.0%
CTATGATTCTACCTAACTCG+CGG - chr1_4:8875610-8875629 None:intergenic 40.0%
TTAAATTACGGGGCTTGTCA+AGG + chr1_4:8875663-8875682 Msa0148530:intron 40.0%
!!! TGGTTGGTTTTACAGCCATT+TGG + chr1_4:8875728-8875747 Msa0148530:intron 40.0%
! CTCAGTATCATCGCATTTTG+TGG - chr1_4:8875754-8875773 None:intergenic 40.0%
TGTGAAGAATAAGGGTGGAA+AGG + chr1_4:8875802-8875821 Msa0148530:intron 40.0%
GGACAAGCTACAAAACTGTA+GGG + chr1_4:8876114-8876133 Msa0148530:intron 40.0%
!! TGATTGGTTTGACAGCCATT+TGG + chr1_4:8876199-8876218 Msa0148530:intron 40.0%
CATCACACTTTATGGCCAAA+TGG - chr1_4:8876217-8876236 None:intergenic 40.0%
TGTCCATCCTTATTCTTCAC+AGG - chr1_4:8876275-8876294 None:intergenic 40.0%
TGTGAAGAATAAGGATGGAC+AGG + chr1_4:8876274-8876293 Msa0148530:intron 40.0%
GCTAGTCCCATACACAATAT+TGG - chr1_4:8876516-8876535 None:intergenic 40.0%
! TGAAATCCTTAAAGTGTCCC+GGG - chr1_4:8876703-8876722 None:intergenic 40.0%
AAATATGGAGAACTCCCTGT+CGG + chr1_4:8876816-8876835 Msa0148530:intron 40.0%
!! CCCAATTGCTGACTTAGTTA+AGG + chr1_4:8876904-8876923 Msa0148530:intron 40.0%
TAACAGAATTTGGCAGACAC+AGG + chr1_4:8876976-8876995 Msa0148530:intron 40.0%
ACACAGGCTACAAAGATGTA+GGG + chr1_4:8876992-8877011 Msa0148530:intron 40.0%
GAGAAAAAAATTAGGCCGCA+AGG + chr1_4:8877014-8877033 Msa0148530:intron 40.0%
TTGATACCTAGAGTCTCATC+TGG - chr1_4:8877070-8877089 None:intergenic 40.0%
TAGACTCGGATCATTTCAAG+TGG + chr1_4:8877181-8877200 Msa0148530:intron 40.0%
CCCTGTCTCATTTACATATG+TGG - chr1_4:8877280-8877299 None:intergenic 40.0%
!! AATTCCTTAAAGAGTGTCCC+GGG - chr1_4:8877319-8877338 None:intergenic 40.0%
!! GAATTCCTTAAAGAGTGTCC+CGG - chr1_4:8877320-8877339 None:intergenic 40.0%
TAACAGAATTTGGCAGACAC+AGG + chr1_4:8876976-8876995 Msa0148530:intron 40.0%
ACACAGGCTACAAAGATGTA+GGG + chr1_4:8876992-8877011 Msa0148530:intron 40.0%
TTTCAAGGAGACTCGTATGA+TGG + chr1_4:8877856-8877875 Msa0148530:intron 40.0%
! TGTCATTTCAGGCATCTCAA+GGG - chr1_4:8877898-8877917 None:intergenic 40.0%
! TTGTCATTTCAGGCATCTCA+AGG - chr1_4:8877899-8877918 None:intergenic 40.0%
TGCACTAAACATTAACCTCG+CGG + chr1_4:8877975-8877994 Msa0148530:intron 40.0%
TGCAAATCGTGTCCTAGTAA+GGG + chr1_4:8878023-8878042 Msa0148530:intron 40.0%
!!! TGTCCTAGTAAGGGCATTTT+AGG + chr1_4:8878032-8878051 Msa0148530:intron 40.0%
TACAGTTAATCCTTGCTGAG+AGG - chr1_4:8878214-8878233 None:intergenic 40.0%
! AAATGCCAAGGAGGTATAGT+GGG - chr1_4:8878347-8878366 None:intergenic 40.0%
! AAAATGCCAAGGAGGTATAG+TGG - chr1_4:8878348-8878367 None:intergenic 40.0%
! ACTATACCTCCTTGGCATTT+TGG + chr1_4:8878347-8878366 Msa0148530:intron 40.0%
! CTATACCTCCTTGGCATTTT+GGG + chr1_4:8878348-8878367 Msa0148530:intron 40.0%
! TATACCTCCTTGGCATTTTG+GGG + chr1_4:8878349-8878368 Msa0148530:intron 40.0%
GTGTTATCAATCTTGGATGG+TGG - chr1_4:8878389-8878408 None:intergenic 40.0%
ACAAGTGATGAACCTAGGTT+AGG - chr1_4:8878834-8878853 None:intergenic 40.0%
CTTGAACAAGTGATGAACCT+AGG - chr1_4:8878839-8878858 None:intergenic 40.0%
CTGCGGATATGAATAGCATT+TGG + chr1_4:8879017-8879036 Msa0148530:intron 40.0%
TTTGGGTAGGATAACATAGC+TGG + chr1_4:8879035-8879054 Msa0148530:intron 40.0%
!! AAGTGTTGATGTGTCAAGTG+TGG + chr1_4:8879111-8879130 Msa0148530:intron 40.0%
!! AGTGTTGATGTGTCAAGTGT+GGG + chr1_4:8879112-8879131 Msa0148530:intron 40.0%
TCCACATCTTCATCCAATGT+CGG - chr1_4:8879146-8879165 None:intergenic 40.0%
GACACCATATCTTCACCATA+TGG - chr1_4:8879197-8879216 None:intergenic 40.0%
!! ATGGTGTCCAAACCACTTTT+TGG + chr1_4:8879209-8879228 Msa0148530:intron 40.0%
AGAGCAACCAAAAAGTGGTT+TGG - chr1_4:8879219-8879238 None:intergenic 40.0%
GACTAAGAGCAACCAAAAAG+TGG - chr1_4:8879224-8879243 None:intergenic 40.0%
!!! TGCATCTGTTGCTTTTGCTT+AGG + chr1_4:8879391-8879410 Msa0148530:intron 40.0%
TTCTTGTTCAGATTGCTGAG+TGG + chr1_4:8879457-8879476 Msa0148530:intron 40.0%
TCTTGTTCAGATTGCTGAGT+GGG + chr1_4:8879458-8879477 Msa0148530:intron 40.0%
TACTTGACATCTCCAATGAG+CGG + chr1_4:8879529-8879548 Msa0148530:CDS 40.0%
GTAGAGAGGGATACATGATT+CGG - chr1_4:8879568-8879587 None:intergenic 40.0%
! TTTGATGATCCTGGTCCATA+CGG + chr1_4:8879645-8879664 Msa0148530:CDS 40.0%
GTTCGAACAATACTGTAGAC+CGG + chr1_4:8879797-8879816 Msa0148530:CDS 40.0%
GCTTGAATGGTTAACATGGT+TGG - chr1_4:8879849-8879868 None:intergenic 40.0%
ACCATGTTAACCATTCAAGC+GGG + chr1_4:8879849-8879868 Msa0148530:CDS 40.0%
! AAAATTTGCTCCTAGTGCCT+TGG + chr1_4:8880043-8880062 Msa0148530:CDS 40.0%
GGTTGGGGAGAACAAGATTA+TGG - chr1_4:8873763-8873782 None:intergenic 45.0%
!! AACGTGCTGGTTTGGAACAA+TGG + chr1_4:8874286-8874305 Msa0148530:CDS 45.0%
GAGGCAATGGTCCTTTAGTA+AGG - chr1_4:8874434-8874453 None:intergenic 45.0%
ATTGCCTCTTGCACCTGTTT+GGG + chr1_4:8874446-8874465 Msa0148530:CDS 45.0%
TTCAGAAACCTCTCCCAAAC+AGG - chr1_4:8874462-8874481 None:intergenic 45.0%
GTTTGGGAGAGGTTTCTGAA+AGG + chr1_4:8874462-8874481 Msa0148530:CDS 45.0%
ATGACGAGTGTTATCAGTCG+CGG + chr1_4:8874866-8874885 Msa0148530:intron 45.0%
CGGGTTGCTAGAACTACATA+AGG + chr1_4:8875071-8875090 Msa0148530:intron 45.0%
ACTTCCATGTCTCTTCTTGG+AGG - chr1_4:8875450-8875469 None:intergenic 45.0%
TATCTGTTTGTAGAGGGTGG+GGG + chr1_4:8875494-8875513 Msa0148530:intron 45.0%
! CATCGCATTTTGTGGCCAAA+TGG - chr1_4:8875746-8875765 None:intergenic 45.0%
CGGACAAGCTACAAAACTGT+AGG + chr1_4:8876113-8876132 Msa0148530:intron 45.0%
ACTATAGCGCTGTAGCATAG+CGG + chr1_4:8876411-8876430 Msa0148530:intron 45.0%
! GAAATCCTTAAAGTGTCCCG+GGG - chr1_4:8876702-8876721 None:intergenic 45.0%
GACACAGGCTACAAAGATGT+AGG + chr1_4:8876991-8877010 Msa0148530:intron 45.0%
TCAGAACCAGATGAGACTCT+AGG + chr1_4:8877061-8877080 Msa0148530:intron 45.0%
!! ATTCCTTAAAGAGTGTCCCG+GGG - chr1_4:8877318-8877337 None:intergenic 45.0%
TAAAAGCTGCCAACCAAGTC+GGG - chr1_4:8877496-8877515 None:intergenic 45.0%
CTAAAAGCTGCCAACCAAGT+CGG - chr1_4:8877497-8877516 None:intergenic 45.0%
GACACAGGCTACAAAGATGT+AGG + chr1_4:8876991-8877010 Msa0148530:intron 45.0%
GTCATTTCAGGCATCTCAAG+GGG - chr1_4:8877897-8877916 None:intergenic 45.0%
CTGCAAATCGTGTCCTAGTA+AGG + chr1_4:8878022-8878041 Msa0148530:intron 45.0%
! TTGCTAGAGAGAGAAGCACA+AGG - chr1_4:8878092-8878111 None:intergenic 45.0%
GGATGAAATTGACCACGATG+AGG - chr1_4:8878181-8878200 None:intergenic 45.0%
TTGCTGAGAGGATGTTGCAA+TGG - chr1_4:8878202-8878221 None:intergenic 45.0%
ATTGCAACATCCTCTCAGCA+AGG + chr1_4:8878201-8878220 Msa0148530:intron 45.0%
TACTACCCACTATACCTCCT+TGG + chr1_4:8878339-8878358 Msa0148530:intron 45.0%
!! TCTTGGATGGTGGAGCAAAA+TGG - chr1_4:8878379-8878398 None:intergenic 45.0%
! GTTCTGTCACTTCCTAACCT+AGG + chr1_4:8878819-8878838 Msa0148530:intron 45.0%
TCCGACATTGGATGAAGATG+TGG + chr1_4:8879142-8879161 Msa0148530:intron 45.0%
TGAGCAGCTATACAAGTGAG+AGG + chr1_4:8879169-8879188 Msa0148530:intron 45.0%
GAGCAGCTATACAAGTGAGA+GGG + chr1_4:8879170-8879189 Msa0148530:intron 45.0%
AGTTCTCTGTTGGGTCATGA+GGG - chr1_4:8879269-8879288 None:intergenic 45.0%
CTTGTTCAGATTGCTGAGTG+GGG + chr1_4:8879459-8879478 Msa0148530:intron 45.0%
AGGACGCTACAACTCAAACA+TGG + chr1_4:8879671-8879690 Msa0148530:CDS 45.0%
AATGGCGTAAAGGCTCTCAA+TGG + chr1_4:8879715-8879734 Msa0148530:CDS 45.0%
GGTGTCTTCCACAATATGGA+CGG - chr1_4:8879763-8879782 None:intergenic 45.0%
ATGCGGTGTCTTCCACAATA+TGG - chr1_4:8879767-8879786 None:intergenic 45.0%
CCATGTTAACCATTCAAGCG+GGG + chr1_4:8879850-8879869 Msa0148530:CDS 45.0%
TGGCAAATCGGAGCATAACT+TGG + chr1_4:8879880-8879899 Msa0148530:CDS 45.0%
GGCAAATCGGAGCATAACTT+GGG + chr1_4:8879881-8879900 Msa0148530:CDS 45.0%
AAATCGGAGCATAACTTGGG+TGG + chr1_4:8879884-8879903 Msa0148530:CDS 45.0%
! AACAAAGGTTCCAAGGCACT+AGG - chr1_4:8880056-8880075 None:intergenic 45.0%
ATGGTGATTGCCTCATTGGA+TGG + chr1_4:8880204-8880223 Msa0148530:three_prime_UTR 45.0%
CTAGCATTCACCATCCAATG+AGG - chr1_4:8880217-8880236 None:intergenic 45.0%
GGATGGTGAATGCTAGATGA+TGG + chr1_4:8880221-8880240 Msa0148530:three_prime_UTR 45.0%
CAAGATGCAATCGAGGGCTT+TGG + chr1_4:8874092-8874111 Msa0148530:exon 50.0%
! AGGGCTTTGGCATCTGAAGA+AGG + chr1_4:8874105-8874124 Msa0148530:CDS 50.0%
!! CGTTGAAGAACGTGCTGGTT+TGG + chr1_4:8874278-8874297 Msa0148530:CDS 50.0%
CAAACAGGTGCAAGAGGCAA+TGG - chr1_4:8874447-8874466 None:intergenic 50.0%
CATTGCCTCTTGCACCTGTT+TGG + chr1_4:8874445-8874464 Msa0148530:CDS 50.0%
GCTTCCTCCAAGAAGAGACA+TGG + chr1_4:8875443-8875462 Msa0148530:intron 50.0%
ATCTGTTTGTAGAGGGTGGG+GGG + chr1_4:8875495-8875514 Msa0148530:intron 50.0%
AGGGAGAAGATTAGGCAGCA+TGG + chr1_4:8876133-8876152 Msa0148530:intron 50.0%
GCTATGCTACAGCGCTATAG+TGG - chr1_4:8876412-8876431 None:intergenic 50.0%
TCAGCTAAAAGCTGCCGACA+GGG - chr1_4:8876833-8876852 None:intergenic 50.0%
AAATGCTAACAAGTGCCCCC+GGG - chr1_4:8877447-8877466 None:intergenic 50.0%
GAAATGCTAACAAGTGCCCC+CGG - chr1_4:8877448-8877467 None:intergenic 50.0%
ATATGGAGAACTCCCCGACT+TGG + chr1_4:8877480-8877499 Msa0148530:intron 50.0%
AAAAGCTGCCAACCAAGTCG+GGG - chr1_4:8877495-8877514 None:intergenic 50.0%
GAGGGCTTCCTGTTTGATGT+AGG - chr1_4:8877555-8877574 None:intergenic 50.0%
AGTCTAGTGCTAAAACCGCG+AGG - chr1_4:8877993-8878012 None:intergenic 50.0%
GACACGATTTGCAGCATCTG+TGG - chr1_4:8878016-8878035 None:intergenic 50.0%
! GAGAGAAGCACAAGGTTGAG+AGG - chr1_4:8878084-8878103 None:intergenic 50.0%
AACAGAGGTCTGCACAGAGA+TGG - chr1_4:8878122-8878141 None:intergenic 50.0%
AGCTCTGCAGCAAGAAACAG+AGG - chr1_4:8878137-8878156 None:intergenic 50.0%
!! GTGGGTTAGAAGTCCGACAT+TGG + chr1_4:8879130-8879149 Msa0148530:intron 50.0%
TACAAGTGAGAGGGCCCATA+TGG + chr1_4:8879179-8879198 Msa0148530:intron 50.0%
GGGCCCATATGGTGAAGATA+TGG + chr1_4:8879190-8879209 Msa0148530:intron 50.0%
TAGTCTACCGTGATGATCCC+TGG + chr1_4:8879239-8879258 Msa0148530:intron 50.0%
AGTCTACCGTGATGATCCCT+GGG + chr1_4:8879240-8879259 Msa0148530:intron 50.0%
GTTCTCTGTTGGGTCATGAG+GGG - chr1_4:8879268-8879287 None:intergenic 50.0%
CAGTTCTCTGTTGGGTCATG+AGG - chr1_4:8879270-8879289 None:intergenic 50.0%
TTCAGATTGCTGAGTGGGGA+AGG + chr1_4:8879463-8879482 Msa0148530:intron 50.0%
! TGCACCGACGAAGCTGAATT+TGG - chr1_4:8879625-8879644 None:intergenic 50.0%
! GTCGGTGCATTTGATGATCC+TGG + chr1_4:8879636-8879655 Msa0148530:CDS 50.0%
TTGTAGCGTCCTCTTCCGTA+TGG - chr1_4:8879663-8879682 None:intergenic 50.0%
CAAGCTTGCCGTCCATATTG+TGG + chr1_4:8879752-8879771 Msa0148530:CDS 50.0%
TGCTCGTCGACATAACAAGC+CGG - chr1_4:8879819-8879838 None:intergenic 50.0%
CCCCGCTTGAATGGTTAACA+TGG - chr1_4:8879853-8879872 None:intergenic 50.0%
GGAGCATAACTTGGGTGGAT+TGG + chr1_4:8879889-8879908 Msa0148530:CDS 50.0%
!! ACTTGGGTGGATTGGTCTAG+AGG + chr1_4:8879897-8879916 Msa0148530:CDS 50.0%
TGGCATGGTGATTGCCTCAT+TGG + chr1_4:8880200-8880219 Msa0148530:three_prime_UTR 50.0%
CCAGCACGTTCTTCAACGCA+TGG - chr1_4:8874276-8874295 None:intergenic 55.0%
CCATGCGTTGAAGAACGTGC+TGG + chr1_4:8874273-8874292 Msa0148530:CDS 55.0%
CTCTCCCAAACAGGTGCAAG+AGG - chr1_4:8874453-8874472 None:intergenic 55.0%
CTCTTGCACCTGTTTGGGAG+AGG + chr1_4:8874451-8874470 Msa0148530:CDS 55.0%
GTGGGGGGTAACAGCCTAAA+TGG + chr1_4:8875510-8875529 Msa0148530:intron 55.0%
TTCGGATTTGGCCGCGAGTT+AGG + chr1_4:8875596-8875615 Msa0148530:intron 55.0%
!! TTCCCATTGAAGAGTGCCCC+CGG + chr1_4:8876766-8876785 Msa0148530:intron 55.0%
TGGGAGATGCTAACGAGTGC+CGG - chr1_4:8876788-8876807 None:intergenic 55.0%
CTCAGCTAAAAGCTGCCGAC+AGG - chr1_4:8876834-8876853 None:intergenic 55.0%
GGGGGCTTCCTGTTTGATGT+AGG - chr1_4:8876887-8876906 None:intergenic 55.0%
GGTCTTGCTAATGAGTGCCC+CGG + chr1_4:8877298-8877317 Msa0148530:intron 55.0%
GTCTTGCTAATGAGTGCCCC+GGG + chr1_4:8877299-8877318 Msa0148530:intron 55.0%
!! AAGGCCCTTAAAGAGTGCCC+CGG + chr1_4:8877426-8877445 Msa0148530:intron 55.0%
AATGCTAACAAGTGCCCCCG+GGG - chr1_4:8877446-8877465 None:intergenic 55.0%
GTTTCTTGCTGCAGAGCTGC+TGG + chr1_4:8878139-8878158 Msa0148530:intron 55.0%
!!! CCTCCTTGGCATTTTGGGGT+CGG + chr1_4:8878353-8878372 Msa0148530:intron 55.0%
GATCCTGGTCCATACGGAAG+AGG + chr1_4:8879651-8879670 Msa0148530:CDS 55.0%
CAACACACTCCCCGCTTGAA+TGG - chr1_4:8879862-8879881 None:intergenic 55.0%
! CATTCAAGCGGGGAGTGTGT+TGG + chr1_4:8879860-8879879 Msa0148530:CDS 55.0%
! CGGGGAGTGTGTTGGCAAAT+CGG + chr1_4:8879868-8879887 Msa0148530:CDS 55.0%
!! TGGGTGGATTGGTCTAGAGG+TGG + chr1_4:8879900-8879919 Msa0148530:CDS 55.0%
!! GGGTGGATTGGTCTAGAGGT+GGG + chr1_4:8879901-8879920 Msa0148530:CDS 55.0%
!! GGTGGATTGGTCTAGAGGTG+GGG + chr1_4:8879902-8879921 Msa0148530:CDS 55.0%
GGTCTTGCTAACGAGTGCCC+CGG + chr1_4:8876682-8876701 Msa0148530:intron 60.0%
GTCTTGCTAACGAGTGCCCC+GGG + chr1_4:8876683-8876702 Msa0148530:intron 60.0%
GAGTGCCCCGGGACACTTTA+AGG + chr1_4:8876694-8876713 Msa0148530:intron 60.0%
!! TGCCGGGGGCACTCTTCAAT+GGG - chr1_4:8876771-8876790 None:intergenic 60.0%
!! GAGATGCTAACGAGTGCCGG+GGG - chr1_4:8876785-8876804 None:intergenic 60.0%
! GGAGATGCTAACGAGTGCCG+GGG - chr1_4:8876786-8876805 None:intergenic 60.0%
GGGAGATGCTAACGAGTGCC+GGG - chr1_4:8876787-8876806 None:intergenic 60.0%
GTGCCCCGGGACACTCTTTA+AGG + chr1_4:8877312-8877331 Msa0148530:intron 60.0%
!! AGGCCCTTAAAGAGTGCCCC+GGG + chr1_4:8877427-8877446 Msa0148530:intron 60.0%
!! GGAGAACTCCCCGACTTGGT+TGG + chr1_4:8877484-8877503 Msa0148530:intron 60.0%
CCGACCCCAAAATGCCAAGG+AGG - chr1_4:8878356-8878375 None:intergenic 60.0%
TGGCCGACCCCAAAATGCCA+AGG - chr1_4:8878359-8878378 None:intergenic 60.0%
GGGGAACCCAGGGATCATCA+CGG - chr1_4:8879249-8879268 None:intergenic 60.0%
TGGGTCATGAGGGGAACCCA+GGG - chr1_4:8879259-8879278 None:intergenic 60.0%
TTGGGTCATGAGGGGAACCC+AGG - chr1_4:8879260-8879279 None:intergenic 60.0%
CGTCCTCTTCCGTATGGACC+AGG - chr1_4:8879657-8879676 None:intergenic 60.0%
GGGGCCCATCCAGCTACATT+TGG + chr1_4:8879921-8879940 Msa0148530:CDS 60.0%
!! GTGCCGGGGGCACTCTTCAA+TGG - chr1_4:8876772-8876791 None:intergenic 65.0%
!! GGCCCTTAAAGAGTGCCCCG+GGG + chr1_4:8877428-8877447 Msa0148530:intron 65.0%
!! GCCCTTAAAGAGTGCCCCGG+GGG + chr1_4:8877429-8877448 Msa0148530:intron 65.0%
! GCCCCCGGGGCACTCTTTAA+GGG - chr1_4:8877433-8877452 None:intergenic 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG - chr1_4:8877434-8877453 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 8873706 8880343 8873706 ID=Msa0148530;Name=Msa0148530
chr1_4 mRNA 8873706 8880343 8873706 ID=Msa0148530-mRNA-1;Parent=Msa0148530;Name=Msa0148530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=390|1|1|1|1|1|2|234|376
chr1_4 exon 8873706 8874584 8873706 ID=Msa0148530-mRNA-1:exon:3738;Parent=Msa0148530-mRNA-1
chr1_4 exon 8879468 8880343 8879468 ID=Msa0148530-mRNA-1:exon:3739;Parent=Msa0148530-mRNA-1
chr1_4 five_prime_UTR 8873706 8874095 8873706 ID=Msa0148530-mRNA-1:five_prime_utr;Parent=Msa0148530-mRNA-1
chr1_4 CDS 8874096 8874584 8874096 ID=Msa0148530-mRNA-1:cds;Parent=Msa0148530-mRNA-1
chr1_4 CDS 8879468 8880109 8879468 ID=Msa0148530-mRNA-1:cds;Parent=Msa0148530-mRNA-1
chr1_4 three_prime_UTR 8880110 8880343 8880110 ID=Msa0148530-mRNA-1:three_prime_utr;Parent=Msa0148530-mRNA-1
Gene Sequence

>Msa0148530

ATGCAATCGAGGGCTTTGGCATCTGAAGAAGGAAAATCAAAAGGGTTATCATTAAGATCACTGCGTTTACTTGTTGTTTTCCTTGCACTATGTGTTGTGTTTTCTGTCATAAGCGTATACACAATTAAGCATTTTGGAATTCAGAGTGTGGTTACTACAATGAGTTCAAGTTTTCAACCATGCGTTGAAGAACGTGCTGGTTTGGAACAATGGATTAAACCTCCTTCAAATCTGATCCATAATATGAGTGATAAAGAACTTCTTTGGAGAGCTTCTTTGGTTCCTAAGATTAAGAATTACCCTTTTGAAAGAGTTCCTAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCTGTTTGGGAGAGGTTTCTGAAAGGGCATGAGAGTCGTTATAGTGTGTATGTTCATCCAACTCCTTCTTATCAAGCCAAGTTTCCTCCTTCATCTGTTTTTTATAAGAGACAAATCCCTAGTCAGATTGCTGAGTGGGGAAGGATGAGCATGTGCGACGCCGAAAGAAGACTACTTGCTAATGCATTACTTGACATCTCCAATGAGCGGTTTATTCTATTGTCCGAATCATGTATCCCTCTCTACAAATTCAGTCTAGTCTACAACTATTTAATGAAATCCAAATTCAGCTTCGTCGGTGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTACAACTCAAACATGGCCCCTCTAGTCAACGTTACAAAATGGCGTAAAGGCTCTCAATGGTTCGAAGTAAATCGCAAGCTTGCCGTCCATATTGTGGAAGACACCGCATTTTATCCTAAGTTCGAACAATACTGTAGACCGGCTTGTTATGTCGACGAGCACTATTTTCCAACCATGTTAACCATTCAAGCGGGGAGTGTGTTGGCAAATCGGAGCATAACTTGGGTGGATTGGTCTAGAGGTGGGGCCCATCCAGCTACATTTGGAAAAACAGATATTACAAAGGAGTTTTTTGATAGAGTTCGTGGAGGTCAAAAATGCCTGTATAACAATAGAAACTCTACGCTTTGTTCTCTTTTTGCAAGAAAATTTGCTCCTAGTGCCTTGGAACCTTTGTTAGATATGGTGAATTCAAAAGTCTTAGACTTCTGA
Protein sequence

>Msa0148530

MQSRALASEEGKSKGLSLRSLRLLVVFLALCVVFSVISVYTIKHFGIQSVVTTMSSSFQPCVEERAGLEQWIKPPSNLIHNMSDKELLWRASLVPKIKNYPFERVPKIAFMFLTKGPLPLAPVWERFLKGHESRYSVYVHPTPSYQAKFPPSSVFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNERFILLSESCIPLYKFSLVYNYLMKSKFSFVGAFDDPGPYGRGRYNSNMAPLVNVTKWRKGSQWFEVNRKLAVHIVEDTAFYPKFEQYCRPACYVDEHYFPTMLTIQAGSVLANRSITWVDWSRGGAHPATFGKTDITKEFFDRVRGGQKCLYNNRNSTLCSLFARKFAPSALEPLLDMVNSKVLDF*