Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098290 | sp|Q65XS5|BC10_ORYSJ | 36.808 | 307 | 146 | 9 | 107 | 368 | 85 | 388 | 5.26e-49 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098290 | A0A072VD62 | 96.809 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0098290 | 0.825797 | 3.853483e-54 | -8.615850e-47 |
| Msa0012710 | Msa0098290 | 0.811994 | 5.299683e-51 | -8.615850e-47 |
| Msa0015090 | Msa0098290 | 0.818355 | 2.047059e-52 | -8.615850e-47 |
| Msa0017320 | Msa0098290 | 0.825518 | 4.486790e-54 | -8.615850e-47 |
| Msa0017660 | Msa0098290 | 0.908503 | 1.592344e-81 | -8.615850e-47 |
| Msa0023330 | Msa0098290 | 0.814774 | 1.298004e-51 | -8.615850e-47 |
| Msa0023480 | Msa0098290 | 0.803300 | 3.722891e-49 | -8.615850e-47 |
| Msa0028620 | Msa0098290 | 0.808833 | 2.549794e-50 | -8.615850e-47 |
| Msa0030160 | Msa0098290 | 0.808610 | 2.845744e-50 | -8.615850e-47 |
| Msa0043980 | Msa0098290 | 0.808767 | 2.634982e-50 | -8.615850e-47 |
| Msa0049750 | Msa0098290 | 0.814424 | 1.551596e-51 | -8.615850e-47 |
| Msa0051040 | Msa0098290 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa0052930 | Msa0098290 | 0.850392 | 1.749712e-60 | -8.615850e-47 |
| Msa0058310 | Msa0098290 | 0.800998 | 1.107669e-48 | -8.615850e-47 |
| Msa0061500 | Msa0098290 | 0.834384 | 3.092379e-56 | -8.615850e-47 |
| Msa0081650 | Msa0098290 | 0.803598 | 3.229982e-49 | -8.615850e-47 |
| Msa0082420 | Msa0098290 | 0.816058 | 6.726377e-52 | -8.615850e-47 |
| Msa0089730 | Msa0098290 | 0.825438 | 4.687463e-54 | -8.615850e-47 |
| Msa0090510 | Msa0098290 | 0.811791 | 5.868245e-51 | -8.615850e-47 |
| Msa0090970 | Msa0098290 | 0.817392 | 3.376541e-52 | -8.615850e-47 |
| Msa0092410 | Msa0098290 | 0.821393 | 4.136087e-53 | -8.615850e-47 |
| Msa0098290 | Msa0102140 | 0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0098290 | Msa0104230 | 0.806779 | 6.968949e-50 | -8.615850e-47 |
| Msa0098290 | Msa0106620 | 0.809478 | 1.854970e-50 | -8.615850e-47 |
| Msa0098290 | Msa0106710 | 0.817571 | 3.077025e-52 | -8.615850e-47 |
| Msa0098290 | Msa0111080 | 0.817565 | 3.086685e-52 | -8.615850e-47 |
| Msa0098290 | Msa0117520 | 0.849449 | 3.210799e-60 | -8.615850e-47 |
| Msa0098290 | Msa0126790 | 0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0098290 | Msa0136630 | 0.850881 | 1.274301e-60 | -8.615850e-47 |
| Msa0098290 | Msa0138020 | 0.849739 | 2.664619e-60 | -8.615850e-47 |
| Msa0098290 | Msa0138900 | 0.810694 | 1.014913e-50 | -8.615850e-47 |
| Msa0098290 | Msa0139670 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0098290 | Msa0142500 | 0.808777 | 2.620966e-50 | -8.615850e-47 |
| Msa0098290 | Msa0144530 | 0.823796 | 1.142169e-53 | -8.615850e-47 |
| Msa0098290 | Msa0148080 | 0.826192 | 3.103739e-54 | -8.615850e-47 |
| Msa0098290 | Msa0148530 | 0.897684 | 1.107083e-76 | -8.615850e-47 |
| Msa0098290 | Msa0152560 | 0.855442 | 6.293097e-62 | -8.615850e-47 |
| Msa0098290 | Msa0154920 | 0.817259 | 3.617982e-52 | -8.615850e-47 |
| Msa0098290 | Msa0160960 | 0.863669 | 2.111160e-64 | -8.615850e-47 |
| Msa0098290 | Msa0171870 | 0.806733 | 7.128733e-50 | -8.615850e-47 |
| Msa0098290 | Msa0172080 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0098290 | Msa0183760 | 0.812157 | 4.882620e-51 | -8.615850e-47 |
| Msa0098290 | Msa0186950 | 0.801387 | 9.221353e-49 | -8.615850e-47 |
| Msa0098290 | Msa0187490 | 0.817467 | 3.248521e-52 | -8.615850e-47 |
| Msa0098290 | Msa0187830 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa0098290 | Msa0189040 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0098290 | Msa0202410 | 0.813006 | 3.184353e-51 | -8.615850e-47 |
| Msa0098290 | Msa0206830 | 0.806035 | 1.000112e-49 | -8.615850e-47 |
| Msa0098290 | Msa0217700 | 0.828763 | 7.504614e-55 | -8.615850e-47 |
| Msa0098290 | Msa0218370 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0098290 | Msa0232020 | 0.822250 | 2.618807e-53 | -8.615850e-47 |
| Msa0098290 | Msa0233370 | 0.824429 | 8.110184e-54 | -8.615850e-47 |
| Msa0098290 | Msa0234090 | 0.804474 | 2.123580e-49 | -8.615850e-47 |
| Msa0098290 | Msa0240270 | 0.842580 | 2.370811e-58 | -8.615850e-47 |
| Msa0098290 | Msa0240900 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0098290 | Msa0241140 | 0.849899 | 2.403975e-60 | -8.615850e-47 |
| Msa0098290 | Msa0257500 | 0.816838 | 4.497591e-52 | -8.615850e-47 |
| Msa0098290 | Msa0267370 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
| Msa0098290 | Msa0267790 | 0.814438 | 1.540786e-51 | -8.615850e-47 |
| Msa0098290 | Msa0269560 | 0.827210 | 1.774126e-54 | -8.615850e-47 |
| Msa0098290 | Msa0278580 | 0.828202 | 1.024722e-54 | -8.615850e-47 |
| Msa0098290 | Msa0287870 | 0.829142 | 6.073356e-55 | -8.615850e-47 |
| Msa0098290 | Msa0295460 | -0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0098290 | Msa0296820 | 0.803821 | 2.903549e-49 | -8.615850e-47 |
| Msa0098290 | Msa0303460 | 0.800798 | 1.217072e-48 | -8.615850e-47 |
| Msa0098290 | Msa0303520 | 0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0098290 | Msa0305410 | 0.816618 | 5.039686e-52 | -8.615850e-47 |
| Msa0098290 | Msa0310440 | 0.835496 | 1.622257e-56 | -8.615850e-47 |
| Msa0098290 | Msa0311720 | 0.807799 | 4.236106e-50 | -8.615850e-47 |
| Msa0098290 | Msa0315690 | 0.802807 | 4.708603e-49 | -8.615850e-47 |
| Msa0098290 | Msa0317960 | 0.800429 | 1.447322e-48 | -8.615850e-47 |
| Msa0098290 | Msa0317970 | 0.817680 | 2.908767e-52 | -8.615850e-47 |
| Msa0098290 | Msa0322240 | 0.802955 | 4.387241e-49 | -8.615850e-47 |
| Msa0098290 | Msa0326750 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0098290 | Msa0347750 | 0.826885 | 2.121860e-54 | -8.615850e-47 |
| Msa0098290 | Msa0363790 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0098290 | Msa0364790 | 0.812620 | 3.867875e-51 | -8.615850e-47 |
| Msa0098290 | Msa0366210 | 0.803384 | 3.577142e-49 | -8.615850e-47 |
| Msa0098290 | Msa0371950 | 0.805992 | 1.021197e-49 | -8.615850e-47 |
| Msa0098290 | Msa0378010 | 0.801502 | 8.736003e-49 | -8.615850e-47 |
| Msa0098290 | Msa0380600 | 0.831830 | 1.336534e-55 | -8.615850e-47 |
| Msa0098290 | Msa0382310 | 0.838783 | 2.342005e-57 | -8.615850e-47 |
| Msa0098290 | Msa0382370 | 0.818749 | 1.666240e-52 | -8.615850e-47 |
| Msa0098290 | Msa0388360 | 0.814017 | 1.908185e-51 | -8.615850e-47 |
| Msa0098290 | Msa0388730 | 0.822939 | 1.810914e-53 | -8.615850e-47 |
| Msa0098290 | Msa0389210 | 0.814730 | 1.327525e-51 | -8.615850e-47 |
| Msa0098290 | Msa0389910 | 0.812317 | 4.505542e-51 | -8.615850e-47 |
| Msa0098290 | Msa0393620 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
| Msa0098290 | Msa0394470 | 0.801239 | 9.889383e-49 | -8.615850e-47 |
| Msa0098290 | Msa0395980 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0098290 | Msa0397270 | 0.805235 | 1.472121e-49 | -8.615850e-47 |
| Msa0098290 | Msa0403490 | 0.812763 | 3.599759e-51 | -8.615850e-47 |
| Msa0098290 | Msa0403770 | 0.814692 | 1.353355e-51 | -8.615850e-47 |
| Msa0098290 | Msa0408300 | 0.801879 | 7.311240e-49 | -8.615850e-47 |
| Msa0098290 | Msa0414140 | 0.831507 | 1.605262e-55 | -8.615850e-47 |
| Msa0098290 | Msa0427580 | 0.859501 | 3.958899e-63 | -8.615850e-47 |
| Msa0098290 | Msa0430240 | 0.828772 | 7.466820e-55 | -8.615850e-47 |
| Msa0098290 | Msa0431210 | 0.823123 | 1.640664e-53 | -8.615850e-47 |
| Msa0098290 | Msa0432160 | 0.822521 | 2.265776e-53 | -8.615850e-47 |
| Msa0098290 | Msa0432500 | 0.800953 | 1.131566e-48 | -8.615850e-47 |
| Msa0098290 | Msa0448610 | 0.801881 | 7.304395e-49 | -8.615850e-47 |
| Msa0098290 | Msa0464100 | 0.810437 | 1.153445e-50 | -8.615850e-47 |
| Msa0098290 | Msa0464120 | 0.826305 | 2.918823e-54 | -8.615850e-47 |
| Msa0098290 | Msa0468320 | 0.813677 | 2.267523e-51 | -8.615850e-47 |
| Msa0098290 | Msa0476680 | 0.830933 | 2.221343e-55 | -8.615850e-47 |
| Msa0098290 | Msa0481030 | 0.837293 | 5.660896e-57 | -8.615850e-47 |
| Msa0098290 | Msa0481280 | 0.807521 | 4.853814e-50 | -8.615850e-47 |
| Msa0098290 | Msa0481970 | 0.815013 | 1.149267e-51 | -8.615850e-47 |
| Msa0098290 | Msa0486690 | 0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0098290 | Msa0491000 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0098290 | Msa0500470 | 0.833282 | 5.832883e-56 | -8.615850e-47 |
| Msa0098290 | Msa0510930 | 0.829640 | 4.596067e-55 | -8.615850e-47 |
| Msa0098290 | Msa0518170 | 0.873801 | 1.109306e-67 | -8.615850e-47 |
| Msa0098290 | Msa0519160 | 0.856324 | 3.474810e-62 | -8.615850e-47 |
| Msa0098290 | Msa0520270 | 0.837472 | 5.094263e-57 | -8.615850e-47 |
| Msa0098290 | Msa0521010 | 0.834058 | 3.733175e-56 | -8.615850e-47 |
| Msa0098290 | Msa0521670 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0098290 | Msa0526020 | 0.810136 | 1.339450e-50 | -8.615850e-47 |
| Msa0098290 | Msa0527540 | 0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0098290 | Msa0530290 | 0.806932 | 6.470721e-50 | -8.615850e-47 |
| Msa0098290 | Msa0534870 | 0.810347 | 1.205865e-50 | -8.615850e-47 |
| Msa0098290 | Msa0545050 | 0.814966 | 1.177211e-51 | -8.615850e-47 |
| Msa0098290 | Msa0552630 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
| Msa0098290 | Msa0566350 | 0.811153 | 8.071378e-51 | -8.615850e-47 |
| Msa0098290 | Msa0566750 | 0.819327 | 1.230986e-52 | -8.615850e-47 |
| Msa0098290 | Msa0569780 | 0.809675 | 1.683298e-50 | -8.615850e-47 |
| Msa0098290 | Msa0573890 | 0.803654 | 3.144489e-49 | -8.615850e-47 |
| Msa0098290 | Msa0574730 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0098290 | Msa0594050 | 0.800926 | 1.145733e-48 | -8.615850e-47 |
| Msa0098290 | Msa0600590 | 0.824517 | 7.732894e-54 | -8.615850e-47 |
| Msa0098290 | Msa0610130 | 0.810864 | 9.322617e-51 | -8.615850e-47 |
| Msa0098290 | Msa0610180 | 0.825448 | 4.661709e-54 | -8.615850e-47 |
| Msa0098290 | Msa0610250 | 0.835233 | 1.890703e-56 | -8.615850e-47 |
| Msa0098290 | Msa0613110 | 0.802413 | 5.678060e-49 | -8.615850e-47 |
| Msa0098290 | Msa0614920 | 0.818667 | 1.739417e-52 | -8.615850e-47 |
| Msa0098290 | Msa0622120 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0098290 | Msa0624060 | 0.815146 | 1.073629e-51 | -8.615850e-47 |
| Msa0098290 | Msa0631320 | 0.808753 | 2.652472e-50 | -8.615850e-47 |
| Msa0098290 | Msa0641130 | 0.824124 | 9.566136e-54 | -8.615850e-47 |
| Msa0098290 | Msa0654900 | 0.807626 | 4.611978e-50 | -8.615850e-47 |
| Msa0098290 | Msa0657120 | 0.809383 | 1.944429e-50 | -8.615850e-47 |
| Msa0098290 | Msa0658680 | 0.801882 | 7.301569e-49 | -8.615850e-47 |
| Msa0098290 | Msa0672550 | 0.814672 | 1.367334e-51 | -8.615850e-47 |
| Msa0098290 | Msa0676130 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa0098290 | Msa0676180 | 0.805731 | 1.158516e-49 | -8.615850e-47 |
| Msa0098290 | Msa0689780 | 0.802215 | 6.236722e-49 | -8.615850e-47 |
| Msa0098290 | Msa0698460 | 0.802918 | 4.466641e-49 | -8.615850e-47 |
| Msa0098290 | Msa0701100 | 0.804262 | 2.350657e-49 | -8.615850e-47 |
| Msa0098290 | Msa0703440 | 0.815214 | 1.036923e-51 | -8.615850e-47 |
| Msa0098290 | Msa0703810 | 0.805015 | 1.637104e-49 | -8.615850e-47 |
| Msa0098290 | Msa0703910 | 0.813552 | 2.415660e-51 | -8.615850e-47 |
| Msa0098290 | Msa0705990 | 0.830807 | 2.385198e-55 | -8.615850e-47 |
| Msa0098290 | Msa0709120 | 0.801741 | 7.802523e-49 | -8.615850e-47 |
| Msa0098290 | Msa0711150 | 0.829093 | 6.241854e-55 | -8.615850e-47 |
| Msa0098290 | Msa0721340 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0098290 | Msa0741440 | 0.807530 | 4.832948e-50 | -8.615850e-47 |
| Msa0098290 | Msa0742150 | 0.806941 | 6.440045e-50 | -8.615850e-47 |
| Msa0098290 | Msa0743930 | 0.808600 | 2.859904e-50 | -8.615850e-47 |
| Msa0098290 | Msa0749440 | 0.811390 | 7.170891e-51 | -8.615850e-47 |
| Msa0098290 | Msa0750810 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
| Msa0098290 | Msa0750850 | 0.837311 | 5.602370e-57 | -8.615850e-47 |
| Msa0098290 | Msa0751850 | 0.802952 | 4.395136e-49 | -8.615850e-47 |
| Msa0098290 | Msa0758260 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa0098290 | Msa0763890 | 0.821247 | 4.469854e-53 | -8.615850e-47 |
| Msa0098290 | Msa0763920 | 0.831637 | 1.491056e-55 | -8.615850e-47 |
| Msa0098290 | Msa0779260 | 0.806232 | 9.092680e-50 | -8.615850e-47 |
| Msa0098290 | Msa0784480 | 0.802032 | 6.799470e-49 | -8.615850e-47 |
| Msa0098290 | Msa0794210 | 0.809068 | 2.271525e-50 | -8.615850e-47 |
| Msa0098290 | Msa0795340 | 0.814661 | 1.375260e-51 | -8.615850e-47 |
| Msa0098290 | Msa0809940 | 0.803588 | 3.245175e-49 | -8.615850e-47 |
| Msa0098290 | Msa0812950 | 0.801838 | 7.455647e-49 | -8.615850e-47 |
| Msa0098290 | Msa0816130 | 0.819150 | 1.351119e-52 | -8.615850e-47 |
| Msa0098290 | Msa0817460 | 0.820053 | 8.405633e-53 | -8.615850e-47 |
| Msa0098290 | Msa0822500 | 0.832516 | 9.040557e-56 | -8.615850e-47 |
| Msa0098290 | Msa0823440 | 0.821263 | 4.429902e-53 | -8.615850e-47 |
| Msa0098290 | Msa0823540 | 0.810418 | 1.164189e-50 | -8.615850e-47 |
| Msa0098290 | Msa0830230 | 0.802373 | 5.785893e-49 | -8.615850e-47 |
| Msa0098290 | Msa0835230 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0098290 | Msa0844110 | 0.822226 | 2.652502e-53 | -8.615850e-47 |
| Msa0098290 | Msa0861470 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
| Msa0098290 | Msa0861570 | 0.824671 | 7.113753e-54 | -8.615850e-47 |
| Msa0098290 | Msa0865030 | 0.802915 | 4.472184e-49 | -8.615850e-47 |
| Msa0098290 | Msa0867870 | 0.823447 | 1.378543e-53 | -8.615850e-47 |
| Msa0098290 | Msa0880810 | 0.805711 | 1.169998e-49 | -8.615850e-47 |
| Msa0098290 | Msa0890550 | 0.809825 | 1.562263e-50 | -8.615850e-47 |
| Msa0098290 | Msa0894710 | 0.840186 | 1.011914e-57 | -8.615850e-47 |
| Msa0098290 | Msa0902830 | 0.814818 | 1.269132e-51 | -8.615850e-47 |
| Msa0098290 | Msa0910620 | 0.813041 | 3.128750e-51 | -8.615850e-47 |
| Msa0098290 | Msa0921420 | 0.847298 | 1.263326e-59 | -8.615850e-47 |
| Msa0098290 | Msa0934140 | 0.811381 | 7.202438e-51 | -8.615850e-47 |
| Msa0098290 | Msa0960390 | 0.844557 | 7.022919e-59 | -8.615850e-47 |
| Msa0098290 | Msa0965290 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0098290 | Msa0970480 | 0.816126 | 6.494573e-52 | -8.615850e-47 |
| Msa0098290 | Msa0975320 | 0.810135 | 1.339609e-50 | -8.615850e-47 |
| Msa0098290 | Msa0985180 | 0.835224 | 1.900416e-56 | -8.615850e-47 |
| Msa0098290 | Msa0992580 | 0.818775 | 1.643358e-52 | -8.615850e-47 |
| Msa0098290 | Msa0992600 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0098290 | Msa0994370 | 0.808291 | 3.329464e-50 | -8.615850e-47 |
| Msa0098290 | Msa0994910 | 0.803944 | 2.737185e-49 | -8.615850e-47 |
| Msa0098290 | Msa0999680 | 0.808482 | 3.031483e-50 | -8.615850e-47 |
| Msa0098290 | Msa1011090 | 0.820939 | 5.261225e-53 | -8.615850e-47 |
| Msa0098290 | Msa1013070 | 0.810566 | 1.081477e-50 | -8.615850e-47 |
| Msa0098290 | Msa1024680 | 0.823750 | 1.170559e-53 | -8.615850e-47 |
| Msa0098290 | Msa1034500 | 0.822093 | 2.848500e-53 | -8.615850e-47 |
| Msa0098290 | Msa1034590 | 0.801555 | 8.520592e-49 | -8.615850e-47 |
| Msa0098290 | Msa1042660 | 0.816168 | 6.353623e-52 | -8.615850e-47 |
| Msa0098290 | Msa1043120 | 0.806195 | 9.256088e-50 | -8.615850e-47 |
| Msa0098290 | Msa1048220 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
| Msa0098290 | Msa1054510 | 0.820983 | 5.140668e-53 | -8.615850e-47 |
| Msa0098290 | Msa1062040 | 0.811023 | 8.613522e-51 | -8.615850e-47 |
| Msa0098290 | Msa1063420 | 0.826064 | 3.329814e-54 | -8.615850e-47 |
| Msa0098290 | Msa1068480 | 0.812652 | 3.806924e-51 | -8.615850e-47 |
| Msa0098290 | Msa1070540 | 0.810650 | 1.037513e-50 | -8.615850e-47 |
| Msa0098290 | Msa1071320 | 0.824245 | 8.959097e-54 | -8.615850e-47 |
| Msa0098290 | Msa1072900 | 0.813775 | 2.157350e-51 | -8.615850e-47 |
| Msa0098290 | Msa1074350 | 0.870324 | 1.590648e-66 | -8.615850e-47 |
| Msa0098290 | Msa1089320 | 0.805782 | 1.130630e-49 | -8.615850e-47 |
| Msa0098290 | Msa1089450 | 0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa0098290 | Msa1089460 | 0.814413 | 1.560540e-51 | -8.615850e-47 |
| Msa0098290 | Msa1093100 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
| Msa0098290 | Msa1101240 | 0.807398 | 5.155401e-50 | -8.615850e-47 |
| Msa0098290 | Msa1107190 | 0.807705 | 4.435447e-50 | -8.615850e-47 |
| Msa0098290 | Msa1107200 | 0.828770 | 7.472921e-55 | -8.615850e-47 |
| Msa0098290 | Msa1109810 | 0.801027 | 1.092559e-48 | -8.615850e-47 |
| Msa0098290 | Msa1122150 | 0.804973 | 1.670241e-49 | -8.615850e-47 |
| Msa0098290 | Msa1126240 | 0.822298 | 2.552680e-53 | -8.615850e-47 |
| Msa0098290 | Msa1137780 | 0.825491 | 4.554192e-54 | -8.615850e-47 |
| Msa0098290 | Msa1144040 | 0.811249 | 7.694634e-51 | -8.615850e-47 |
| Msa0098290 | Msa1150780 | 0.816148 | 6.419496e-52 | -8.615850e-47 |
| Msa0098290 | Msa1158390 | 0.848327 | 6.576436e-60 | -8.615850e-47 |
| Msa0098290 | Msa1160560 | 0.800841 | 1.192818e-48 | -8.615850e-47 |
| Msa0098290 | Msa1162780 | 0.816093 | 6.605488e-52 | -8.615850e-47 |
| Msa0098290 | Msa1163090 | 0.802779 | 4.771040e-49 | -8.615850e-47 |
| Msa0098290 | Msa1175200 | 0.857409 | 1.664407e-62 | -8.615850e-47 |
| Msa0098290 | Msa1176380 | 0.817255 | 3.626115e-52 | -8.615850e-47 |
| Msa0098290 | Msa1183140 | 0.840149 | 1.034480e-57 | -8.615850e-47 |
| Msa0098290 | Msa1207310 | 0.826439 | 2.710874e-54 | -8.615850e-47 |
| Msa0098290 | Msa1209440 | 0.803937 | 2.746344e-49 | -8.615850e-47 |
| Msa0098290 | Msa1212050 | 0.822103 | 2.832471e-53 | -8.615850e-47 |
| Msa0098290 | Msa1214170 | 0.800122 | 1.671513e-48 | -8.615850e-47 |
| Msa0098290 | Msa1218580 | 0.803956 | 2.720934e-49 | -8.615850e-47 |
| Msa0098290 | Msa1221330 | 0.812523 | 4.061140e-51 | -8.615850e-47 |
| Msa0098290 | Msa1231810 | 0.806403 | 8.367583e-50 | -8.615850e-47 |
| Msa0098290 | Msa1236440 | 0.840507 | 8.339177e-58 | -8.615850e-47 |
| Msa0098290 | Msa1240970 | 0.801093 | 1.059513e-48 | -8.615850e-47 |
| Msa0098290 | Msa1246360 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
| Msa0098290 | Msa1246700 | 0.804267 | 2.344840e-49 | -8.615850e-47 |
| Msa0098290 | Msa1250110 | 0.810976 | 8.817824e-51 | -8.615850e-47 |
| Msa0098290 | Msa1253660 | 0.805329 | 1.406833e-49 | -8.615850e-47 |
| Msa0098290 | Msa1259860 | 0.827414 | 1.585244e-54 | -8.615850e-47 |
| Msa0098290 | Msa1260060 | 0.807104 | 5.949482e-50 | -8.615850e-47 |
| Msa0098290 | Msa1260680 | 0.827117 | 1.867654e-54 | -8.615850e-47 |
| Msa0098290 | Msa1264420 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0098290 | Msa1265280 | 0.815002 | 1.155387e-51 | -8.615850e-47 |
| Msa0098290 | Msa1270660 | 0.854442 | 1.227848e-61 | -8.615850e-47 |
| Msa0098290 | Msa1270730 | 0.815870 | 7.408300e-52 | -8.615850e-47 |
| Msa0098290 | Msa1275510 | 0.803136 | 4.026719e-49 | -8.615850e-47 |
| Msa0098290 | Msa1277670 | 0.834778 | 2.461599e-56 | -8.615850e-47 |
| Msa0098290 | Msa1277780 | 0.813053 | 3.109420e-51 | -8.615850e-47 |
| Msa0098290 | Msa1280170 | 0.808958 | 2.397934e-50 | -8.615850e-47 |
| Msa0098290 | Msa1295330 | 0.820284 | 7.438867e-53 | -8.615850e-47 |
| Msa0098290 | Msa1304940 | 0.800403 | 1.465388e-48 | -8.615850e-47 |
| Msa0098290 | Msa1307160 | 0.820279 | 7.458672e-53 | -8.615850e-47 |
| Msa0098290 | Msa1307180 | 0.859967 | 2.865960e-63 | -8.615850e-47 |
| Msa0098290 | Msa1309760 | 0.826289 | 2.943944e-54 | -8.615850e-47 |
| Msa0098290 | Msa1312500 | 0.823518 | 1.326836e-53 | -8.615850e-47 |
| Msa0098290 | Msa1316360 | 0.862299 | 5.593426e-64 | -8.615850e-47 |
| Msa0098290 | Msa1325410 | -0.819263 | 1.273168e-52 | -8.615850e-47 |
| Msa0098290 | Msa1332050 | 0.828824 | 7.253544e-55 | -8.615850e-47 |
| Msa0098290 | Msa1335230 | 0.829518 | 4.921447e-55 | -8.615850e-47 |
| Msa0098290 | Msa1337480 | 0.827522 | 1.493178e-54 | -8.615850e-47 |
| Msa0098290 | Msa1338400 | 0.821675 | 3.559751e-53 | -8.615850e-47 |
| Msa0098290 | Msa1340200 | 0.809686 | 1.673566e-50 | -8.615850e-47 |
| Msa0098290 | Msa1346840 | 0.830555 | 2.749135e-55 | -8.615850e-47 |
| Msa0098290 | Msa1352280 | -0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0098290 | Msa1355890 | 0.821379 | 4.167148e-53 | -8.615850e-47 |
| Msa0098290 | Msa1364210 | 0.806463 | 8.126458e-50 | -8.615850e-47 |
| Msa0098290 | Msa1368360 | 0.820208 | 7.743784e-53 | -8.615850e-47 |
| Msa0098290 | Msa1369920 | -0.819701 | 1.011402e-52 | -8.615850e-47 |
| Msa0098290 | Msa1371940 | 0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0098290 | Msa1372280 | 0.844184 | 8.847669e-59 | -8.615850e-47 |
| Msa0098290 | Msa1378410 | 0.814189 | 1.749119e-51 | -8.615850e-47 |
| Msa0098290 | Msa1380220 | 0.840645 | 7.674826e-58 | -8.615850e-47 |
| Msa0098290 | Msa1382020 | 0.800459 | 1.426934e-48 | -8.615850e-47 |
| Msa0098290 | Msa1382790 | 0.808595 | 2.866658e-50 | -8.615850e-47 |
| Msa0098290 | Msa1386890 | 0.807183 | 5.723247e-50 | -8.615850e-47 |
| Msa0098290 | Msa1389880 | 0.806482 | 8.052080e-50 | -8.615850e-47 |
| Msa0098290 | Msa1400930 | 0.829525 | 4.903131e-55 | -8.615850e-47 |
| Msa0098290 | Msa1401460 | 0.806458 | 8.146364e-50 | -8.615850e-47 |
| Msa0098290 | Msa1407190 | 0.812207 | 4.761504e-51 | -8.615850e-47 |
| Msa0098290 | Msa1407760 | 0.816113 | 6.538504e-52 | -8.615850e-47 |
| Msa0098290 | Msa1412130 | 0.839409 | 1.612292e-57 | -8.615850e-47 |
| Msa0098290 | Msa1419840 | 0.811821 | 5.780014e-51 | -8.615850e-47 |
| Msa0098290 | Msa1420270 | 0.809258 | 2.067698e-50 | -8.615850e-47 |
| Msa0098290 | Msa1423540 | 0.849326 | 3.474193e-60 | -8.615850e-47 |
| Msa0098290 | Msa1423820 | 0.811674 | 6.222095e-51 | -8.615850e-47 |
| Msa0098290 | Msa1425260 | 0.839271 | 1.750998e-57 | -8.615850e-47 |
| Msa0098290 | Msa1428780 | 0.828401 | 9.179317e-55 | -8.615850e-47 |
| Msa0098290 | Msa1430130 | 0.807690 | 4.469501e-50 | -8.615850e-47 |
| Msa0098290 | Msa1430550 | 0.818762 | 1.655305e-52 | -8.615850e-47 |
| Msa0098290 | Msa1432130 | 0.815903 | 7.283845e-52 | -8.615850e-47 |
| Msa0098290 | Msa1437730 | 0.806911 | 6.534228e-50 | -8.615850e-47 |
| Msa0098290 | Msa1438840 | 0.802153 | 6.421142e-49 | -8.615850e-47 |
| Msa0098290 | Msa1440790 | 0.812204 | 4.769562e-51 | -8.615850e-47 |
| Msa0098290 | Msa1442920 | 0.818638 | 1.765600e-52 | -8.615850e-47 |
| Msa0098290 | Msa1444120 | 0.804459 | 2.138259e-49 | -8.615850e-47 |
| Msa0098290 | Msa1444260 | 0.809696 | 1.665451e-50 | -8.615850e-47 |
| Msa0098290 | Msa1448560 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa0098290 | Msa1457160 | 0.817029 | 4.075899e-52 | -8.615850e-47 |
| Msa0098290 | Msa1458680 | 0.822694 | 2.065804e-53 | -8.615850e-47 |
| Msa0098290 | Msa1460750 | 0.805879 | 1.078761e-49 | -8.615850e-47 |
| Msa0098290 | Msa1462360 | 0.834543 | 2.821244e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098290 | MtrunA17_Chr1g0151841 | 96.552 | 377 | 12 | 1 | 1 | 376 | 1 | 377 | 0.0 | 759 |
| Msa0098290 | MtrunA17_Chr8g0341461 | 68.155 | 336 | 103 | 2 | 35 | 369 | 75 | 407 | 3.39e-177 | 499 |
| Msa0098290 | MtrunA17_Chr1g0209531 | 56.190 | 315 | 134 | 4 | 63 | 376 | 82 | 393 | 8.67e-133 | 386 |
| Msa0098290 | MtrunA17_Chr2g0276861 | 58.086 | 303 | 125 | 2 | 75 | 376 | 137 | 438 | 1.02e-131 | 384 |
| Msa0098290 | MtrunA17_Chr5g0423131 | 49.856 | 347 | 166 | 3 | 26 | 366 | 37 | 381 | 1.66e-126 | 369 |
| Msa0098290 | MtrunA17_Chr6g0484141 | 52.532 | 316 | 148 | 2 | 52 | 366 | 96 | 410 | 3.95e-124 | 364 |
| Msa0098290 | MtrunA17_Chr5g0394961 | 54.485 | 301 | 135 | 2 | 67 | 366 | 113 | 412 | 1.45e-121 | 358 |
| Msa0098290 | MtrunA17_Chr3g0136091 | 49.834 | 301 | 131 | 4 | 67 | 366 | 103 | 384 | 2.33e-105 | 315 |
| Msa0098290 | MtrunA17_Chr4g0073871 | 57.353 | 204 | 87 | 0 | 163 | 366 | 9 | 212 | 5.38e-89 | 267 |
| Msa0098290 | MtrunA17_Chr5g0394981 | 55.882 | 204 | 90 | 0 | 163 | 366 | 2 | 205 | 6.05e-85 | 257 |
| Msa0098290 | MtrunA17_Chr3g0138871 | 39.692 | 325 | 170 | 5 | 75 | 376 | 60 | 381 | 1.97e-79 | 248 |
| Msa0098290 | MtrunA17_Chr1g0148241 | 38.356 | 365 | 196 | 7 | 25 | 366 | 32 | 390 | 1.02e-76 | 242 |
| Msa0098290 | MtrunA17_Chr4g0071911 | 41.479 | 311 | 157 | 6 | 83 | 371 | 83 | 390 | 5.38e-75 | 238 |
| Msa0098290 | MtrunA17_Chr2g0298501 | 42.361 | 288 | 141 | 5 | 106 | 371 | 105 | 389 | 2.35e-72 | 231 |
| Msa0098290 | MtrunA17_Chr2g0298511 | 41.115 | 287 | 145 | 4 | 106 | 371 | 97 | 380 | 1.51e-71 | 228 |
| Msa0098290 | MtrunA17_Chr8g0384601 | 37.377 | 305 | 146 | 8 | 106 | 368 | 55 | 356 | 1.06e-55 | 186 |
| Msa0098290 | MtrunA17_Chr2g0289021 | 38.170 | 317 | 152 | 10 | 91 | 366 | 46 | 359 | 7.48e-55 | 184 |
| Msa0098290 | MtrunA17_Chr1g0170231 | 34.828 | 290 | 159 | 7 | 106 | 374 | 63 | 343 | 3.41e-47 | 164 |
| Msa0098290 | MtrunA17_Chr3g0137661 | 34.520 | 281 | 171 | 7 | 107 | 374 | 95 | 375 | 1.68e-40 | 147 |
| Msa0098290 | MtrunA17_Chr1g0170151 | 35.211 | 284 | 154 | 9 | 106 | 369 | 64 | 337 | 9.38e-38 | 139 |
| Msa0098290 | MtrunA17_Chr2g0322161 | 33.667 | 300 | 156 | 11 | 107 | 374 | 78 | 366 | 1.60e-36 | 136 |
| Msa0098290 | MtrunA17_Chr5g0394971 | 57.471 | 87 | 36 | 1 | 79 | 164 | 1 | 87 | 1.63e-30 | 112 |
| Msa0098290 | MtrunA17_Chr4g0073881 | 51.000 | 100 | 47 | 2 | 67 | 165 | 112 | 210 | 1.70e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098290 | AT5G11730.1 | 67.183 | 387 | 115 | 3 | 1 | 376 | 1 | 386 | 0.0 | 535 |
| Msa0098290 | AT5G25970.1 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.20e-180 | 506 |
| Msa0098290 | AT5G25970.2 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.20e-180 | 506 |
| Msa0098290 | AT5G25970.3 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.20e-180 | 506 |
| Msa0098290 | AT3G21310.1 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.57e-161 | 457 |
| Msa0098290 | AT3G21310.3 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.57e-161 | 457 |
| Msa0098290 | AT1G51770.1 | 59.827 | 346 | 131 | 3 | 35 | 376 | 51 | 392 | 6.04e-157 | 447 |
| Msa0098290 | AT1G51770.2 | 55.043 | 347 | 121 | 4 | 34 | 376 | 50 | 365 | 3.95e-138 | 399 |
| Msa0098290 | AT1G10280.1 | 56.113 | 319 | 137 | 3 | 59 | 376 | 96 | 412 | 5.10e-132 | 384 |
| Msa0098290 | AT1G68390.1 | 54.487 | 312 | 139 | 2 | 67 | 376 | 98 | 408 | 1.83e-127 | 372 |
| Msa0098290 | AT5G16170.1 | 53.094 | 307 | 126 | 2 | 78 | 366 | 94 | 400 | 1.02e-117 | 348 |
| Msa0098290 | AT1G10880.1 | 53.103 | 290 | 131 | 2 | 81 | 368 | 93 | 379 | 4.86e-117 | 345 |
| Msa0098290 | AT1G68380.1 | 47.324 | 355 | 171 | 8 | 26 | 370 | 39 | 387 | 2.68e-108 | 323 |
| Msa0098290 | AT1G73810.1 | 50.492 | 305 | 145 | 3 | 70 | 371 | 113 | 414 | 7.56e-107 | 320 |
| Msa0098290 | AT3G21310.2 | 61.905 | 210 | 75 | 2 | 35 | 243 | 46 | 251 | 5.41e-90 | 272 |
| Msa0098290 | AT4G31350.4 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.28e-80 | 250 |
| Msa0098290 | AT4G31350.1 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.28e-80 | 250 |
| Msa0098290 | AT4G31350.2 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.28e-80 | 250 |
| Msa0098290 | AT4G30060.2 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.29e-76 | 240 |
| Msa0098290 | AT4G30060.1 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.29e-76 | 240 |
| Msa0098290 | AT4G31350.3 | 43.197 | 294 | 136 | 6 | 96 | 366 | 76 | 361 | 8.90e-76 | 239 |
| Msa0098290 | AT2G19160.2 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.72e-73 | 234 |
| Msa0098290 | AT2G19160.1 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.72e-73 | 234 |
| Msa0098290 | AT4G25870.1 | 38.854 | 314 | 165 | 6 | 79 | 368 | 70 | 380 | 2.75e-72 | 231 |
| Msa0098290 | AT5G57270.3 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.27e-70 | 226 |
| Msa0098290 | AT5G57270.1 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.27e-70 | 226 |
| Msa0098290 | AT5G57270.4 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.27e-70 | 226 |
| Msa0098290 | AT5G57270.5 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.27e-70 | 226 |
| Msa0098290 | AT5G57270.2 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.27e-70 | 226 |
| Msa0098290 | AT5G14550.2 | 41.270 | 252 | 126 | 6 | 103 | 335 | 61 | 309 | 3.35e-58 | 193 |
| Msa0098290 | AT5G14550.3 | 37.658 | 316 | 152 | 8 | 97 | 370 | 55 | 367 | 8.64e-58 | 192 |
| Msa0098290 | AT5G14550.1 | 37.342 | 316 | 152 | 9 | 97 | 369 | 55 | 367 | 1.55e-57 | 192 |
| Msa0098290 | AT5G25330.1 | 35.054 | 368 | 213 | 13 | 24 | 375 | 4 | 361 | 3.62e-50 | 172 |
| Msa0098290 | AT1G62305.1 | 36.190 | 315 | 155 | 10 | 92 | 366 | 56 | 364 | 1.15e-49 | 171 |
| Msa0098290 | AT1G11940.1 | 36.149 | 296 | 146 | 8 | 106 | 361 | 73 | 365 | 4.59e-49 | 170 |
| Msa0098290 | AT3G52060.1 | 34.409 | 279 | 163 | 8 | 106 | 373 | 74 | 343 | 4.65e-48 | 166 |
| Msa0098290 | AT5G14550.4 | 36.486 | 296 | 156 | 8 | 97 | 370 | 55 | 340 | 9.01e-47 | 163 |
| Msa0098290 | AT1G62305.3 | 41.304 | 230 | 107 | 7 | 92 | 299 | 56 | 279 | 4.08e-45 | 158 |
| Msa0098290 | AT1G11940.2 | 43.258 | 178 | 94 | 4 | 106 | 279 | 73 | 247 | 3.68e-40 | 143 |
| Msa0098290 | AT5G22070.1 | 33.445 | 299 | 159 | 9 | 107 | 374 | 71 | 360 | 2.61e-39 | 144 |
| Msa0098290 | AT4G32290.1 | 33.242 | 364 | 208 | 11 | 31 | 375 | 31 | 378 | 3.35e-37 | 138 |
| Msa0098290 | AT1G62305.2 | 32.381 | 315 | 143 | 11 | 92 | 366 | 56 | 340 | 2.52e-35 | 133 |
Find 96 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGTACAAATGAGCTTAT+TGG | 0.154481 | 1_3:+4234426 | Msa0098290:three_prime_UTR |
| TGCACCGACGAAGCTGAATT+TGG | 0.205834 | 1_3:-4233764 | None:intergenic |
| GTTCTTTATCACTCATATTA+TGG | 0.210415 | 1_3:-4228467 | None:intergenic |
| CATTGCCTCTTGCACCTGTT+TGG | 0.243558 | 1_3:+4228580 | Msa0098290:CDS |
| ACTTCTTTGGAGAGCTTCTT+TGG | 0.250935 | 1_3:+4228488 | Msa0098290:CDS |
| AAAGGGTAATTCTTAATCTT+AGG | 0.260696 | 1_3:-4228513 | None:intergenic |
| GTATACACAATTAAGCATTT+TGG | 0.282389 | 1_3:+4228345 | Msa0098290:CDS |
| TGAGTGATAAAGAACTTCTT+TGG | 0.293369 | 1_3:+4228475 | Msa0098290:CDS |
| ATTGCCTCTTGCACCTGTTT+GGG | 0.296741 | 1_3:+4228581 | Msa0098290:CDS |
| TAGAGTTTCTATTGTTATAC+AGG | 0.336336 | 1_3:-4234140 | None:intergenic |
| CTTGGAACCTTTGTTAGATA+TGG | 0.338936 | 1_3:+4234203 | Msa0098290:CDS |
| TTGACTAGAGGGGCCATGTT+TGG | 0.342155 | 1_3:-4233826 | None:intergenic |
| AGGAACATAAAAGCAATCTT+AGG | 0.357395 | 1_3:-4228546 | None:intergenic |
| TGACTAGAGGGGCCATGTTT+GGG | 0.361044 | 1_3:-4233825 | None:intergenic |
| ATGCGGTGTCTTCCACAATA+TGG | 0.362225 | 1_3:-4233906 | None:intergenic |
| CTCTAGTCAACGTTACAAAA+TGG | 0.364473 | 1_3:+4233839 | Msa0098290:CDS |
| CGTTGAAGAACGTGCTGGTT+TGG | 0.378429 | 1_3:+4228413 | Msa0098290:CDS |
| TGGCATGGTGATTGCCTCAT+TGG | 0.392310 | 1_3:+4234342 | Msa0098290:three_prime_UTR |
| ATCTTAGGAACTCTTTCAAA+AGG | 0.395819 | 1_3:-4228531 | None:intergenic |
| CTACAGTATTGTTCGAACTT+AGG | 0.401155 | 1_3:-4233934 | None:intergenic |
| ATTAGCAAGTAGTCTTCTTT+CGG | 0.401766 | 1_3:-4233644 | None:intergenic |
| GTCGGTGCATTTGATGATCC+TGG | 0.408642 | 1_3:+4233778 | Msa0098290:CDS |
| CTCTTGCACCTGTTTGGGAG+AGG | 0.412242 | 1_3:+4228586 | Msa0098290:CDS |
| CAACACACTCCCCGCTTGAA+TGG | 0.413577 | 1_3:-4234001 | None:intergenic |
| TCTTGTTCAGATTGCTGAGT+GGG | 0.414497 | 1_3:+4233600 | Msa0098290:intron |
| GGGTGGATTGGTCTAGAGGT+GGG | 0.417834 | 1_3:+4234043 | Msa0098290:CDS |
| CAAGATGCAATCGAGGGCTT+TGG | 0.417995 | 1_3:+4228227 | Msa0098290:exon |
| GGGGCCCATCCAGCTACATT+TGG | 0.423319 | 1_3:+4234063 | Msa0098290:CDS |
| TTCAGAAACCTCTCCCAAAC+AGG | 0.428489 | 1_3:-4228594 | None:intergenic |
| CGGGGAGTGTGTTGGCAAAT+CGG | 0.432852 | 1_3:+4234010 | Msa0098290:CDS |
| TGGCAAATCGGAGCATAACT+TGG | 0.433668 | 1_3:+4234022 | Msa0098290:CDS |
| TCTGAAGAAGGAAAATCAAA+AGG | 0.438585 | 1_3:+4228252 | Msa0098290:CDS |
| CAAAATATACATACCTGACT+AGG | 0.457704 | 1_3:-4228711 | None:intergenic |
| AACAGATGAAGGAGGAAACT+TGG | 0.460141 | 1_3:-4228670 | None:intergenic |
| AAAATTTGCTCCTAGTGCCT+TGG | 0.467657 | 1_3:+4234185 | Msa0098290:CDS |
| CAATAGAATAAACCGCTCAT+TGG | 0.469034 | 1_3:-4233683 | None:intergenic |
| GGAAACTTGGCTTGATAAGA+AGG | 0.470311 | 1_3:-4228657 | None:intergenic |
| TAAGAGACAAATCCCTAGTC+AGG | 0.472658 | 1_3:+4228698 | Msa0098290:CDS |
| GGAGCATAACTTGGGTGGAT+TGG | 0.479204 | 1_3:+4234031 | Msa0098290:CDS |
| GCTTGAATGGTTAACATGGT+TGG | 0.484426 | 1_3:-4233988 | None:intergenic |
| AACGTGCTGGTTTGGAACAA+TGG | 0.490018 | 1_3:+4228421 | Msa0098290:CDS |
| TTGGCTTGATAAGAAGGAGT+TGG | 0.500843 | 1_3:-4228651 | None:intergenic |
| CGTCCTCTTCCGTATGGACC+AGG | 0.503162 | 1_3:-4233796 | None:intergenic |
| TTTGGGAGAGGTTTCTGAAA+GGG | 0.509717 | 1_3:+4228598 | Msa0098290:CDS |
| GTAGAGAGGGATACATGATT+CGG | 0.512493 | 1_3:-4233707 | None:intergenic |
| GAGGCAATGGTCCTTTAGTA+AGG | 0.515491 | 1_3:-4228566 | None:intergenic |
| CTAGACTGAATTTGTAGAGA+GGG | 0.522832 | 1_3:-4233720 | None:intergenic |
| ATATTATGGATCAGATTTGA+AGG | 0.522939 | 1_3:-4228453 | None:intergenic |
| TGGGTGGATTGGTCTAGAGG+TGG | 0.535618 | 1_3:+4234042 | Msa0098290:CDS |
| TTGTAGCGTCCTCTTCCGTA+TGG | 0.537017 | 1_3:-4233802 | None:intergenic |
| TCTTAGGAACTCTTTCAAAA+GGG | 0.537953 | 1_3:-4228530 | None:intergenic |
| TTCAGATTGCTGAGTGGGGA+AGG | 0.538958 | 1_3:+4233605 | Msa0098290:intron |
| CTCTCCCAAACAGGTGCAAG+AGG | 0.544373 | 1_3:-4228585 | None:intergenic |
| CTCAAAAGTTATGAAAATTG+AGG | 0.546705 | 1_3:-4234395 | None:intergenic |
| AACGTTACAAAATGGCGTAA+AGG | 0.547258 | 1_3:+4233847 | Msa0098290:CDS |
| ACCATGTTAACCATTCAAGC+GGG | 0.549181 | 1_3:+4233991 | Msa0098290:CDS |
| CATATCTAACAAAGGTTCCA+AGG | 0.551048 | 1_3:-4234202 | None:intergenic |
| CTGAAGAAGGAAAATCAAAA+GGG | 0.552666 | 1_3:+4228253 | Msa0098290:CDS |
| CAAGCTTGCCGTCCATATTG+TGG | 0.554887 | 1_3:+4233894 | Msa0098290:CDS |
| CTTGTTCAGATTGCTGAGTG+GGG | 0.555008 | 1_3:+4233601 | Msa0098290:intron |
| AGGGCTTTGGCATCTGAAGA+AGG | 0.556245 | 1_3:+4228240 | Msa0098290:CDS |
| TTTGATGATCCTGGTCCATA+CGG | 0.557830 | 1_3:+4233787 | Msa0098290:CDS |
| GATCCTGGTCCATACGGAAG+AGG | 0.560466 | 1_3:+4233793 | Msa0098290:CDS |
| AAATCCAAATTCAGCTTCGT+CGG | 0.569207 | 1_3:+4233760 | Msa0098290:CDS |
| ATGGTGATTGCCTCATTGGA+TGG | 0.570076 | 1_3:+4234346 | Msa0098290:three_prime_UTR |
| GGTGGATTGGTCTAGAGGTG+GGG | 0.570596 | 1_3:+4234044 | Msa0098290:CDS |
| AATGGCGTAAAGGCTCTCAA+TGG | 0.571190 | 1_3:+4233857 | Msa0098290:CDS |
| CAAACAGGTGCAAGAGGCAA+TGG | 0.572308 | 1_3:-4228579 | None:intergenic |
| CATTCAAGCGGGGAGTGTGT+TGG | 0.572448 | 1_3:+4234002 | Msa0098290:CDS |
| ACTTGGGTGGATTGGTCTAG+AGG | 0.573299 | 1_3:+4234039 | Msa0098290:CDS |
| CCCCGCTTGAATGGTTAACA+TGG | 0.575864 | 1_3:-4233992 | None:intergenic |
| CCAGCACGTTCTTCAACGCA+TGG | 0.586978 | 1_3:-4228408 | None:intergenic |
| AACCATGTTAACCATTCAAG+CGG | 0.590819 | 1_3:+4233990 | Msa0098290:CDS |
| CCATGCGTTGAAGAACGTGC+TGG | 0.593014 | 1_3:+4228408 | Msa0098290:CDS |
| AAAATATACATACCTGACTA+GGG | 0.593555 | 1_3:-4228710 | None:intergenic |
| GAATTCACCATATCTAACAA+AGG | 0.595366 | 1_3:-4234210 | None:intergenic |
| GTTTGGGAGAGGTTTCTGAA+AGG | 0.596050 | 1_3:+4228597 | Msa0098290:CDS |
| TTCTTGTTCAGATTGCTGAG+TGG | 0.597688 | 1_3:+4233599 | Msa0098290:intron |
| GTTCGAACAATACTGTAGAC+CGG | 0.597734 | 1_3:+4233939 | Msa0098290:CDS |
| GGCAAATCGGAGCATAACTT+GGG | 0.604748 | 1_3:+4234023 | Msa0098290:CDS |
| AACAAAGGTTCCAAGGCACT+AGG | 0.605399 | 1_3:-4234195 | None:intergenic |
| TTTAAGCAAGATGCAATCGA+GGG | 0.613015 | 1_3:+4228221 | Msa0098290:intron |
| TACTTGACATCTCCAATGAG+CGG | 0.613960 | 1_3:+4233671 | Msa0098290:CDS |
| AAAACACAACACATAGTGCA+AGG | 0.624692 | 1_3:-4228311 | None:intergenic |
| AGGACGCTACAACCCAAACA+TGG | 0.648045 | 1_3:+4233813 | Msa0098290:CDS |
| TGCTCGTCGACATAACAAGC+CGG | 0.649367 | 1_3:-4233958 | None:intergenic |
| TTCGAACTTAGGATAAAATG+CGG | 0.652612 | 1_3:-4233923 | None:intergenic |
| ACTAGACTGAATTTGTAGAG+AGG | 0.654314 | 1_3:-4233721 | None:intergenic |
| AAATCGGAGCATAACTTGGG+TGG | 0.655678 | 1_3:+4234026 | Msa0098290:CDS |
| GGATGGTGAATGCTAGATGA+TGG | 0.659665 | 1_3:+4234363 | Msa0098290:three_prime_UTR |
| TTATGGATCAGATTTGAAGG+AGG | 0.663245 | 1_3:-4228450 | None:intergenic |
| GGTGTCTTCCACAATATGGA+CGG | 0.663514 | 1_3:-4233902 | None:intergenic |
| AAATAACACTCAATACGAGG+TGG | 0.672202 | 1_3:+4227412 | None:intergenic |
| CTAGCATTCACCATCCAATG+AGG | 0.673494 | 1_3:-4234356 | None:intergenic |
| AGTGTCAAAGAGTACCAGCA+AGG | 0.705726 | 1_3:+4227435 | Msa0098290:five_prime_UTR |
| CCATGTTAACCATTCAAGCG+GGG | 0.708045 | 1_3:+4233992 | Msa0098290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTAGAAATTTTATTATA+TGG | + | chr1_3:4234317-4234336 | Msa0098290:three_prime_UTR | 10.0% |
| !!! | AGAAAAAAAAAACATGATTT+TGG | - | chr1_3:4227554-4227573 | None:intergenic | 15.0% |
| !! | TCTTAAGAATATAAGATAAA+GGG | - | chr1_3:4227874-4227893 | Msa0098300:intron | 15.0% |
| !! | TTCTTAAGAATATAAGATAA+AGG | - | chr1_3:4227875-4227894 | Msa0098300:intron | 15.0% |
| !! | GATCAAATATTTAATGTAAA+TGG | - | chr1_3:4228086-4228105 | None:intergenic | 15.0% |
| !!! | AGATAATTTTTGTTTATTTG+AGG | + | chr1_3:4228196-4228215 | Msa0098290:intron | 15.0% |
| !! | AGAAGTTAATAATGTTTAAT+TGG | + | chr1_3:4228786-4228805 | Msa0098290:intron | 15.0% |
| !! | ATAAATAAATACATATCACT+TGG | + | chr1_3:4229962-4229981 | Msa0098290:intron | 15.0% |
| !!! | CTTTAATAATTTAAGGTTTT+AGG | - | chr1_3:4230003-4230022 | None:intergenic | 15.0% |
| !! | CTAAAACCTTAAATTATTAA+AGG | + | chr1_3:4230001-4230020 | Msa0098290:intron | 15.0% |
| !!! | AATTAGTTTTACAAGTTTAT+AGG | + | chr1_3:4230702-4230721 | Msa0098290:intron | 15.0% |
| !!! | ATTAGTTTTACAAGTTTATA+GGG | + | chr1_3:4230703-4230722 | Msa0098290:intron | 15.0% |
| !! | TCATAAAAACTTACTATTTA+AGG | + | chr1_3:4231542-4231561 | Msa0098290:intron | 15.0% |
| !!! | TTTTTTTTTTGAAGAAAAAC+TGG | - | chr1_3:4233056-4233075 | None:intergenic | 15.0% |
| !!! | CTGATAAATTTTTATGTCAT+TGG | + | chr1_3:4227704-4227723 | Msa0098290:intron | 20.0% |
| !! | ATAAAATGGCGTTAAATTTA+TGG | - | chr1_3:4228051-4228070 | None:intergenic | 20.0% |
| !! | AGAATGAATGAAACTTTATA+TGG | - | chr1_3:4228137-4228156 | None:intergenic | 20.0% |
| !!! | AGGTTTTGATGAATTTTTTT+GGG | + | chr1_3:4228883-4228902 | Msa0098290:intron | 20.0% |
| !!! | TTTTTTTGGGTTATAGATTT+TGG | + | chr1_3:4228896-4228915 | Msa0098290:intron | 20.0% |
| !! | TATATAGTATTGTCAAATAG+CGG | - | chr1_3:4229081-4229100 | None:intergenic | 20.0% |
| !!! | AAAACATTTAGGTTTATGTA+AGG | + | chr1_3:4229258-4229277 | Msa0098290:intron | 20.0% |
| !!! | AAACATTTAGGTTTATGTAA+GGG | + | chr1_3:4229259-4229278 | Msa0098290:intron | 20.0% |
| !! | TTATGCAAAGTTATATTGTA+AGG | + | chr1_3:4229499-4229518 | Msa0098290:intron | 20.0% |
| !! | TATGCAAAGTTATATTGTAA+GGG | + | chr1_3:4229500-4229519 | Msa0098290:intron | 20.0% |
| !! | TATTAATAGCTTAAGCATAT+AGG | - | chr1_3:4229833-4229852 | None:intergenic | 20.0% |
| !! | ATGCTTAAGCTATTAATATA+CGG | + | chr1_3:4229835-4229854 | Msa0098290:intron | 20.0% |
| !! | ACTTAATTTATCATTTGATG+CGG | - | chr1_3:4229917-4229936 | None:intergenic | 20.0% |
| !!! | AAATTAAGTTGTGAAGAATA+AGG | + | chr1_3:4229928-4229947 | Msa0098290:intron | 20.0% |
| !!! | AATTAAGTTGTGAAGAATAA+GGG | + | chr1_3:4229929-4229948 | Msa0098290:intron | 20.0% |
| !! | TTCATGCCTTTAATAATTTA+AGG | - | chr1_3:4230010-4230029 | None:intergenic | 20.0% |
| !!! | CTTTAACAATTTAAGCTTTT+AGG | - | chr1_3:4230676-4230695 | None:intergenic | 20.0% |
| !! | CTAAAAGCTTAAATTGTTAA+AGG | + | chr1_3:4230674-4230693 | Msa0098290:intron | 20.0% |
| !!! | TCTAGCTTAAAATATCATTT+AGG | + | chr1_3:4231235-4231254 | Msa0098290:intron | 20.0% |
| !! | CTAGCTTAAAATATCATTTA+GGG | + | chr1_3:4231236-4231255 | Msa0098290:intron | 20.0% |
| !! | AATACTAAAACATTGTCATT+TGG | + | chr1_3:4231267-4231286 | Msa0098290:intron | 20.0% |
| !! | AATACTAAAACATTGTCATT+TGG | + | chr1_3:4231267-4231286 | Msa0098290:intron | 20.0% |
| !!! | TGATAGTCGTTTATTTTTAT+AGG | + | chr1_3:4233458-4233477 | Msa0098290:intron | 20.0% |
| !!! | AGAAATTTTATTATATGGCA+TGG | + | chr1_3:4234322-4234341 | Msa0098290:three_prime_UTR | 20.0% |
| ! | GAATGAAACTGTGAAAAATA+AGG | - | chr1_3:4227519-4227538 | None:intergenic | 25.0% |
| ! | GTTAATACAAAAACGATGAT+TGG | + | chr1_3:4227672-4227691 | Msa0098290:intron | 25.0% |
| ! | GAAAAAACTGATTGATGAAA+GGG | - | chr1_3:4227816-4227835 | Msa0098300:CDS | 25.0% |
| ! | TGAAAAAACTGATTGATGAA+AGG | - | chr1_3:4227817-4227836 | Msa0098300:CDS | 25.0% |
| ! | GGAGTAATAAATGCATAAAA+TGG | - | chr1_3:4228065-4228084 | None:intergenic | 25.0% |
| !! | GTATACACAATTAAGCATTT+TGG | + | chr1_3:4228345-4228364 | Msa0098290:CDS | 25.0% |
| ! | ATATTATGGATCAGATTTGA+AGG | - | chr1_3:4228456-4228475 | None:intergenic | 25.0% |
| ! | GTTCTTTATCACTCATATTA+TGG | - | chr1_3:4228470-4228489 | None:intergenic | 25.0% |
| ! | AAAGGGTAATTCTTAATCTT+AGG | - | chr1_3:4228516-4228535 | None:intergenic | 25.0% |
| ! | TTATAAAAAACAGATGAAGG+AGG | - | chr1_3:4228681-4228700 | None:intergenic | 25.0% |
| ! | CTCTTATAAAAAACAGATGA+AGG | - | chr1_3:4228684-4228703 | None:intergenic | 25.0% |
| ! | AAAATATACATACCTGACTA+GGG | - | chr1_3:4228713-4228732 | None:intergenic | 25.0% |
| !!! | GAGGTTTTGATGAATTTTTT+TGG | + | chr1_3:4228882-4228901 | Msa0098290:intron | 25.0% |
| !! | TGAGAATATAACATGCTTTT+GGG | + | chr1_3:4229358-4229377 | Msa0098290:intron | 25.0% |
| ! | TACGCAGAAAATGATAAAAA+GGG | - | chr1_3:4229475-4229494 | None:intergenic | 25.0% |
| ! | TTACGCAGAAAATGATAAAA+AGG | - | chr1_3:4229476-4229495 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTACTGCATGTT+CGG | + | chr1_3:4229713-4229732 | Msa0098290:intron | 25.0% |
| ! | AACTCGTTGTGATTAAATTA+CGG | + | chr1_3:4229786-4229805 | Msa0098290:intron | 25.0% |
| !! | AAGGCATGAAATTAGTTTAA+AGG | + | chr1_3:4230020-4230039 | Msa0098290:intron | 25.0% |
| !! | AGGCATGAAATTAGTTTAAA+GGG | + | chr1_3:4230021-4230040 | Msa0098290:intron | 25.0% |
| ! | AACGAGATATCAGAAATATT+AGG | - | chr1_3:4230075-4230094 | None:intergenic | 25.0% |
| !!! | ATTGACTTTTGTGAAATGTT+AGG | - | chr1_3:4230117-4230136 | None:intergenic | 25.0% |
| ! | ATTAGAATTCTAACAGAATC+TGG | + | chr1_3:4230223-4230242 | Msa0098290:intron | 25.0% |
| ! | ACTTAATAGCTTAAGTTTAG+AGG | - | chr1_3:4230306-4230325 | None:intergenic | 25.0% |
| ! | AAACTTAAGCTATTAAGTGA+AGG | + | chr1_3:4230308-4230327 | Msa0098290:intron | 25.0% |
| ! | ATATTAACCTGTGAAGAATA+AGG | + | chr1_3:4230400-4230419 | Msa0098290:intron | 25.0% |
| ! | AGATATCTGGATATATATTG+TGG | - | chr1_3:4230744-4230763 | None:intergenic | 25.0% |
| ! | AATCACTTTAACAAGATATC+TGG | - | chr1_3:4230757-4230776 | None:intergenic | 25.0% |
| ! | ATTTACATATGTGGAATCTT+AGG | - | chr1_3:4230790-4230809 | None:intergenic | 25.0% |
| !! | TCTCCATATTTTATCTCAAT+GGG | - | chr1_3:4230942-4230961 | None:intergenic | 25.0% |
| !! | TTCTCCATATTTTATCTCAA+TGG | - | chr1_3:4230943-4230962 | None:intergenic | 25.0% |
| !! | ATTAGAGTTCTAACAGAATT+TGG | + | chr1_3:4231101-4231120 | Msa0098290:intron | 25.0% |
| ! | AATCACTTTAACAAGATATC+TGG | - | chr1_3:4230757-4230776 | None:intergenic | 25.0% |
| ! | ATTTCCCATTGAGATAAATA+TGG | + | chr1_3:4231598-4231617 | Msa0098290:intron | 25.0% |
| ! | TTCTCCATATTTATCTCAAT+GGG | - | chr1_3:4231605-4231624 | None:intergenic | 25.0% |
| !! | ATTAGAGTTCTAACAGAATT+TGG | + | chr1_3:4231101-4231120 | Msa0098290:intron | 25.0% |
| !! | TCTAGCTTACAATATCATTT+CGG | + | chr1_3:4231897-4231916 | Msa0098290:intron | 25.0% |
| ! | AATGTAACAGCTAAATGATA+AGG | + | chr1_3:4232079-4232098 | Msa0098290:intron | 25.0% |
| !!! | AGGTTCTCAACTATTTTAAT+AGG | - | chr1_3:4232199-4232218 | None:intergenic | 25.0% |
| ! | TTAATCTGTGTTATCAATCT+TGG | - | chr1_3:4232531-4232550 | None:intergenic | 25.0% |
| ! | TTGAATATTTATTGTGCATG+TGG | + | chr1_3:4232573-4232592 | Msa0098290:intron | 25.0% |
| ! | TTGAATATTTATTGTGCATG+TGG | + | chr1_3:4232573-4232592 | Msa0098290:intron | 25.0% |
| ! | CAATTATCTGATAAAGATAC+TGG | - | chr1_3:4233089-4233108 | None:intergenic | 25.0% |
| ! | TGCTTAGGTTTATGTTAATA+TGG | + | chr1_3:4233548-4233567 | Msa0098290:intron | 25.0% |
| ! | TGGAAAAACAGATATTACAA+AGG | + | chr1_3:4234083-4234102 | Msa0098290:CDS | 25.0% |
| ! | TAGAGTTTCTATTGTTATAC+AGG | - | chr1_3:4234143-4234162 | None:intergenic | 25.0% |
| ! | CTCAAAAGTTATGAAAATTG+AGG | - | chr1_3:4234398-4234417 | None:intergenic | 25.0% |
| ATTACGATCCGATAAATCTA+AGG | + | chr1_3:4227729-4227748 | Msa0098290:intron | 30.0% | |
| TTACGATCCGATAAATCTAA+GGG | + | chr1_3:4227730-4227749 | Msa0098290:intron | 30.0% | |
| ! | TGGGTCAACTTTTGAATATA+CGG | - | chr1_3:4227950-4227969 | Msa0098300:CDS | 30.0% |
| CACTACAATAAAACAAGCTA+TGG | - | chr1_3:4227998-4228017 | None:intergenic | 30.0% | |
| TCTTTCATAACCCTTAATAG+AGG | + | chr1_3:4228104-4228123 | Msa0098290:intron | 30.0% | |
| CTTTCATAACCCTTAATAGA+GGG | + | chr1_3:4228105-4228124 | Msa0098290:intron | 30.0% | |
| TCTGAAGAAGGAAAATCAAA+AGG | + | chr1_3:4228252-4228271 | Msa0098290:CDS | 30.0% | |
| CTGAAGAAGGAAAATCAAAA+GGG | + | chr1_3:4228253-4228272 | Msa0098290:CDS | 30.0% | |
| TGAGTGATAAAGAACTTCTT+TGG | + | chr1_3:4228475-4228494 | Msa0098290:CDS | 30.0% | |
| TCTTAGGAACTCTTTCAAAA+GGG | - | chr1_3:4228533-4228552 | None:intergenic | 30.0% | |
| ATCTTAGGAACTCTTTCAAA+AGG | - | chr1_3:4228534-4228553 | None:intergenic | 30.0% | |
| AGGAACATAAAAGCAATCTT+AGG | - | chr1_3:4228549-4228568 | None:intergenic | 30.0% | |
| ! | GCTTTTATGTTCCTTACTAA+AGG | + | chr1_3:4228555-4228574 | Msa0098290:CDS | 30.0% |
| CAAAATATACATACCTGACT+AGG | - | chr1_3:4228714-4228733 | None:intergenic | 30.0% | |
| CCTCAAAACAATCATAAACA+AGG | - | chr1_3:4228866-4228885 | None:intergenic | 30.0% | |
| !! | CCTTGTTTATGATTGTTTTG+AGG | + | chr1_3:4228863-4228882 | Msa0098290:intron | 30.0% |
| TTACTTTCTGATTTCTGTTC+TGG | + | chr1_3:4228947-4228966 | Msa0098290:intron | 30.0% | |
| AAGTTCCACTAAACTAATAG+CGG | + | chr1_3:4229141-4229160 | Msa0098290:intron | 30.0% | |
| TCAAGTACAATGTTGTCAAA+TGG | - | chr1_3:4229177-4229196 | None:intergenic | 30.0% | |
| TAGAACTACATAAGGAACTA+AGG | + | chr1_3:4229214-4229233 | Msa0098290:intron | 30.0% | |
| AACTAAGGAAAGACTTATGA+GGG | + | chr1_3:4229229-4229248 | Msa0098290:intron | 30.0% | |
| ! | GAGGGTATACAAAAACATTT+AGG | + | chr1_3:4229247-4229266 | Msa0098290:intron | 30.0% |
| ! | GTGAGAATATAACATGCTTT+TGG | + | chr1_3:4229357-4229376 | Msa0098290:intron | 30.0% |
| AGGAAAAAATAAGATCACTC+AGG | + | chr1_3:4229543-4229562 | Msa0098290:intron | 30.0% | |
| GGAAAAAATAAGATCACTCA+GGG | + | chr1_3:4229544-4229563 | Msa0098290:intron | 30.0% | |
| AAGTAATTGTTGCCTATTCA+TGG | + | chr1_3:4229601-4229620 | Msa0098290:intron | 30.0% | |
| CAACGAGTTTGATGAAATAA+AGG | - | chr1_3:4229775-4229794 | None:intergenic | 30.0% | |
| ACTCGTTGTGATTAAATTAC+GGG | + | chr1_3:4229787-4229806 | Msa0098290:intron | 30.0% | |
| AATTTATCATTTGATGCGGT+GGG | - | chr1_3:4229913-4229932 | None:intergenic | 30.0% | |
| TAATTTATCATTTGATGCGG+TGG | - | chr1_3:4229914-4229933 | None:intergenic | 30.0% | |
| AAATATTAGGCTATGAACAG+AGG | - | chr1_3:4230062-4230081 | None:intergenic | 30.0% | |
| ACCAATTGTTGACATAGTTA+AGG | + | chr1_3:4230167-4230186 | Msa0098290:intron | 30.0% | |
| ACCTTAACTATGTCAACAAT+TGG | - | chr1_3:4230171-4230190 | None:intergenic | 30.0% | |
| TAAAGTTAGTTAGTGCTTGT+AGG | + | chr1_3:4230194-4230213 | Msa0098290:intron | 30.0% | |
| GCTTAAGTTTAGAGGAAATT+TGG | - | chr1_3:4230298-4230317 | None:intergenic | 30.0% | |
| TATTAAGTGAAGGACATGAT+TGG | + | chr1_3:4230318-4230337 | Msa0098290:intron | 30.0% | |
| GAGTTTCCAATATTGTGTAT+GGG | + | chr1_3:4230642-4230661 | Msa0098290:intron | 30.0% | |
| TCTCCCATTGAGATAAAATA+TGG | + | chr1_3:4230936-4230955 | Msa0098290:intron | 30.0% | |
| TAGTACTAGTTAGAGTTAGT+TGG | + | chr1_3:4231062-4231081 | Msa0098290:intron | 30.0% | |
| GATGTAGGGAGAAAAAAATT+AGG | + | chr1_3:4231141-4231160 | Msa0098290:intron | 30.0% | |
| ! | TAAAACATTGTCATTTGGTG+AGG | + | chr1_3:4231272-4231291 | Msa0098290:intron | 30.0% |
| GTTCTCCATATTTATCTCAA+TGG | - | chr1_3:4231606-4231625 | None:intergenic | 30.0% | |
| TTAACTAAGTCAGCAATTGA+GGG | - | chr1_3:4231708-4231727 | None:intergenic | 30.0% | |
| GATGTAGGGAGAAAAAAATT+AGG | + | chr1_3:4231141-4231160 | Msa0098290:intron | 30.0% | |
| CTAGCTTACAATATCATTTC+GGG | + | chr1_3:4231898-4231917 | Msa0098290:intron | 30.0% | |
| ! | TAAAACATTGTCATTTGGTG+AGG | + | chr1_3:4231272-4231291 | Msa0098290:intron | 30.0% |
| ! | CATTAAAACGTTGTCATTTC+AGG | - | chr1_3:4232044-4232063 | None:intergenic | 30.0% |
| !! | TTCTCGAGTCATTGTTATTT+CGG | + | chr1_3:4233223-4233242 | Msa0098290:intron | 30.0% |
| ATTAGCAAGTAGTCTTCTTT+CGG | - | chr1_3:4233647-4233666 | None:intergenic | 30.0% | |
| !! | ATTTTGTAACGTTGACTAGA+GGG | - | chr1_3:4233840-4233859 | None:intergenic | 30.0% |
| TTCGAACTTAGGATAAAATG+CGG | - | chr1_3:4233926-4233945 | None:intergenic | 30.0% | |
| GAATTCACCATATCTAACAA+AGG | - | chr1_3:4234213-4234232 | None:intergenic | 30.0% | |
| ! | TTTTATTATATGGCATGGCA+TGG | + | chr1_3:4234327-4234346 | Msa0098290:three_prime_UTR | 30.0% |
| GAATGTACAAATGAGCTTAT+TGG | + | chr1_3:4234426-4234445 | Msa0098290:three_prime_UTR | 30.0% | |
| ACATACATAGCGATCTTTGA+AGG | - | chr1_3:4227613-4227632 | None:intergenic | 35.0% | |
| !! | CTCTGAAATAAGTCGATTGA+GGG | + | chr1_3:4227650-4227669 | Msa0098290:intron | 35.0% |
| TACGATCCGATAAATCTAAG+GGG | + | chr1_3:4227731-4227750 | Msa0098290:intron | 35.0% | |
| CAAAAGCCCCTTAGATTTAT+CGG | - | chr1_3:4227740-4227759 | None:intergenic | 35.0% | |
| AAACTGATTGATGAAAGGGA+TGG | - | chr1_3:4227812-4227831 | Msa0098300:CDS | 35.0% | |
| AGAACAAGATTATGGCACAT+GGG | - | chr1_3:4227919-4227938 | Msa0098300:CDS | 35.0% | |
| ! | AACTTTTGAATATACGGGGT+CGG | - | chr1_3:4227944-4227963 | Msa0098300:CDS | 35.0% |
| ! | GGTCAACTTTTGAATATACG+GGG | - | chr1_3:4227948-4227967 | Msa0098300:CDS | 35.0% |
| ! | GGGTCAACTTTTGAATATAC+GGG | - | chr1_3:4227949-4227968 | Msa0098300:CDS | 35.0% |
| GGCGTTAAATTTATGGTCTA+CGG | - | chr1_3:4228044-4228063 | None:intergenic | 35.0% | |
| ! | TTTTAAGCAAGATGCAATCG+AGG | + | chr1_3:4228220-4228239 | Msa0098290:intron | 35.0% |
| TTTAAGCAAGATGCAATCGA+GGG | + | chr1_3:4228221-4228240 | Msa0098290:intron | 35.0% | |
| AAAACACAACACATAGTGCA+AGG | - | chr1_3:4228314-4228333 | None:intergenic | 35.0% | |
| TTATGGATCAGATTTGAAGG+AGG | - | chr1_3:4228453-4228472 | None:intergenic | 35.0% | |
| GGCTGATATGCACTTTATTA+TGG | + | chr1_3:4228917-4228936 | Msa0098290:intron | 35.0% | |
| ! | CTATACCGCTATTAGTTTAG+TGG | - | chr1_3:4229149-4229168 | None:intergenic | 35.0% |
| AGTACAATGTTGTCAAATGG+TGG | - | chr1_3:4229174-4229193 | None:intergenic | 35.0% | |
| ATTGTACTTGATCAGTTCAC+CGG | + | chr1_3:4229186-4229205 | Msa0098290:intron | 35.0% | |
| GAACTAAGGAAAGACTTATG+AGG | + | chr1_3:4229228-4229247 | Msa0098290:intron | 35.0% | |
| TCGACGAGTTAAATTTCTCA+AGG | + | chr1_3:4229305-4229324 | Msa0098290:intron | 35.0% | |
| CGACGAGTTAAATTTCTCAA+GGG | + | chr1_3:4229306-4229325 | Msa0098290:intron | 35.0% | |
| ATAAGTGTGCAGAAACATGT+TGG | + | chr1_3:4229391-4229410 | Msa0098290:intron | 35.0% | |
| ACGTATAATTAGGTCGTATG+TGG | - | chr1_3:4229421-4229440 | None:intergenic | 35.0% | |
| CCAACTAGGTACGTATAATT+AGG | - | chr1_3:4229431-4229450 | None:intergenic | 35.0% | |
| CCTAATTATACGTACCTAGT+TGG | + | chr1_3:4229428-4229447 | Msa0098290:intron | 35.0% | |
| TGAATTTGCAACAACCAACT+AGG | - | chr1_3:4229445-4229464 | None:intergenic | 35.0% | |
| CATGATACAAGTTTGAGAGA+AGG | + | chr1_3:4229523-4229542 | Msa0098290:intron | 35.0% | |
| ATAAGATCACTCAGGGATTA+AGG | + | chr1_3:4229551-4229570 | Msa0098290:intron | 35.0% | |
| ATTACTTCCATGTCTCTTCT+TGG | - | chr1_3:4229588-4229607 | None:intergenic | 35.0% | |
| ACAGATAACAGACCATGAAT+AGG | - | chr1_3:4229616-4229635 | None:intergenic | 35.0% | |
| GTCTGTTATCTGTTTGTAGA+GGG | + | chr1_3:4229623-4229642 | Msa0098290:intron | 35.0% | |
| !! | TGCACGTATTTTGGATTTCA+TGG | + | chr1_3:4229674-4229693 | Msa0098290:intron | 35.0% |
| !! | GCACGTATTTTGGATTTCAT+GGG | + | chr1_3:4229675-4229694 | Msa0098290:intron | 35.0% |
| ! | TTTTGGATTTCATGGGAAGA+TGG | + | chr1_3:4229682-4229701 | Msa0098290:intron | 35.0% |
| ! | TTTTACTGCATGTTCGGATT+TGG | + | chr1_3:4229719-4229738 | Msa0098290:intron | 35.0% |
| CGAGTTTGATGAAATAAAGG+CGG | - | chr1_3:4229772-4229791 | None:intergenic | 35.0% | |
| CTCGTTGTGATTAAATTACG+GGG | + | chr1_3:4229788-4229807 | Msa0098290:intron | 35.0% | |
| GCTTAAGCATATAGGAAAGT+TGG | - | chr1_3:4229825-4229844 | None:intergenic | 35.0% | |
| GCTATTAATATACGGACACA+TGG | + | chr1_3:4229843-4229862 | Msa0098290:intron | 35.0% | |
| TTAATATACGGACACATGGT+TGG | + | chr1_3:4229847-4229866 | Msa0098290:intron | 35.0% | |
| TAAGTTGTGAAGAATAAGGG+TGG | + | chr1_3:4229932-4229951 | Msa0098290:intron | 35.0% | |
| CTTAAAAGTCTACAGCAAAC+AGG | + | chr1_3:4230139-4230158 | Msa0098290:intron | 35.0% | |
| AATTCTAACAGAATCTGGCA+CGG | + | chr1_3:4230228-4230247 | Msa0098290:intron | 35.0% | |
| AAAACTGTAGGGAGAAGATT+AGG | + | chr1_3:4230260-4230279 | Msa0098290:intron | 35.0% | |
| CTGTGTATCATCACACTTTA+TGG | - | chr1_3:4230360-4230379 | None:intergenic | 35.0% | |
| AGGTTAATATCAGCATGCAA+TGG | - | chr1_3:4230390-4230409 | None:intergenic | 35.0% | |
| TAACCTGTGAAGAATAAGGA+TGG | + | chr1_3:4230404-4230423 | Msa0098290:intron | 35.0% | |
| CGATAAGTGATTGACAACAT+TGG | + | chr1_3:4230594-4230613 | Msa0098290:intron | 35.0% | |
| TGGTAGAAATTCAGATCACT+TGG | + | chr1_3:4230614-4230633 | Msa0098290:intron | 35.0% | |
| AAATTCAGATCACTTGGTCA+AGG | + | chr1_3:4230620-4230639 | Msa0098290:intron | 35.0% | |
| GGAGTTTCCAATATTGTGTA+TGG | + | chr1_3:4230641-4230660 | Msa0098290:intron | 35.0% | |
| CCATGTCTCATTTACATATG+TGG | - | chr1_3:4230799-4230818 | None:intergenic | 35.0% | |
| CCACATATGTAAATGAGACA+TGG | + | chr1_3:4230796-4230815 | Msa0098290:intron | 35.0% | |
| ! | TTGAAATCCTTAAAGTGTCC+CGG | - | chr1_3:4230839-4230858 | None:intergenic | 35.0% |
| CTTAAAAGCCTACATCAAAC+AGG | + | chr1_3:4231011-4231030 | Msa0098290:intron | 35.0% | |
| TTAACTAAGTCAGCAATTGG+GGG | - | chr1_3:4231040-4231059 | None:intergenic | 35.0% | |
| CTTAACTAAGTCAGCAATTG+GGG | - | chr1_3:4231041-4231060 | None:intergenic | 35.0% | |
| CCTTAACTAAGTCAGCAATT+GGG | - | chr1_3:4231042-4231061 | None:intergenic | 35.0% | |
| ACCTTAACTAAGTCAGCAAT+TGG | - | chr1_3:4231043-4231062 | None:intergenic | 35.0% | |
| !! | TTTGACTTTTGACAACCTTG+CGG | - | chr1_3:4231167-4231186 | None:intergenic | 35.0% |
| AACAAGTTTGCAAGTAGACT+CGG | + | chr1_3:4231302-4231321 | Msa0098290:intron | 35.0% | |
| ! | TTTCAAGTGGACTCTTATGA+TGG | + | chr1_3:4231329-4231348 | Msa0098290:intron | 35.0% |
| CTTAAAAGCCTACATCAAAC+AGG | + | chr1_3:4231011-4231030 | Msa0098290:intron | 35.0% | |
| CTTAACTAAGTCAGCAATTG+AGG | - | chr1_3:4231041-4231060 | None:intergenic | 35.0% | |
| !! | CTCAATTGCTGACTTAGTTA+AGG | + | chr1_3:4231707-4231726 | Msa0098290:intron | 35.0% |
| !! | TAGAGTTAGTTTGTGCTTGT+AGG | + | chr1_3:4231734-4231753 | Msa0098290:intron | 35.0% |
| TCATAACCATATGAGTCTCT+AGG | + | chr1_3:4231858-4231877 | Msa0098290:intron | 35.0% | |
| TTGATACCTAGAGACTCATA+TGG | - | chr1_3:4231867-4231886 | None:intergenic | 35.0% | |
| ! | TGTCATTTGGTGAGGAAAAT+TGG | + | chr1_3:4231942-4231961 | Msa0098290:intron | 35.0% |
| AGTAGACTCAGATCATTTCA+AGG | + | chr1_3:4231976-4231995 | Msa0098290:intron | 35.0% | |
| GGTTAATGTTTAGTGCACTA+TGG | - | chr1_3:4232107-4232126 | None:intergenic | 35.0% | |
| ATACCTAAAATGCCCTTACT+AGG | - | chr1_3:4232173-4232192 | None:intergenic | 35.0% | |
| !!! | CTCTTTTTTTTACCTCATCG+TGG | + | chr1_3:4232301-4232320 | Msa0098290:intron | 35.0% |
| TCTGTGTTATCAATCTTGGA+TGG | - | chr1_3:4232527-4232546 | None:intergenic | 35.0% | |
| !! | TGTGTTTGTTGAGTTGAGAT+TGG | + | chr1_3:4232888-4232907 | Msa0098290:intron | 35.0% |
| !!! | TGTTGAGTTGAGATTGGTTT+TGG | + | chr1_3:4232894-4232913 | Msa0098290:intron | 35.0% |
| !!! | GAGATTGGTTTTGGTTCTTT+AGG | + | chr1_3:4232903-4232922 | Msa0098290:intron | 35.0% |
| !!! | TTGGTTTTGGTTCTTTAGGA+TGG | + | chr1_3:4232907-4232926 | Msa0098290:intron | 35.0% |
| TTCATCACTTGTTCAAGCTA+AGG | + | chr1_3:4232982-4233001 | Msa0098290:intron | 35.0% | |
| TCATCACTTGTTCAAGCTAA+GGG | + | chr1_3:4232983-4233002 | Msa0098290:intron | 35.0% | |
| !! | ACGCAAAAAGAGCATCTTTA+TGG | - | chr1_3:4233123-4233142 | None:intergenic | 35.0% |
| ! | GCTCTTTTTGCGTTAAGAAT+CGG | + | chr1_3:4233130-4233149 | Msa0098290:intron | 35.0% |
| TTAAGAATCGGTAAAGACTG+CGG | + | chr1_3:4233142-4233161 | Msa0098290:intron | 35.0% | |
| TGCGGATATGAATAGCATTT+GGG | + | chr1_3:4233160-4233179 | Msa0098290:intron | 35.0% | |
| GATATGAATAGCATTTGGGT+AGG | + | chr1_3:4233164-4233183 | Msa0098290:intron | 35.0% | |
| !! | TCTCGAGTCATTGTTATTTC+GGG | + | chr1_3:4233224-4233243 | Msa0098290:intron | 35.0% |
| ACACCATATCTTCACCATAT+GGG | - | chr1_3:4233338-4233357 | None:intergenic | 35.0% | |
| ! | TTTTGTTGCAGTTCTCTGTT+GGG | - | chr1_3:4233420-4233439 | None:intergenic | 35.0% |
| ! | TTTTTGTTGCAGTTCTCTGT+TGG | - | chr1_3:4233421-4233440 | None:intergenic | 35.0% |
| CAATAGAATAAACCGCTCAT+TGG | - | chr1_3:4233686-4233705 | None:intergenic | 35.0% | |
| CTAGACTGAATTTGTAGAGA+GGG | - | chr1_3:4233723-4233742 | None:intergenic | 35.0% | |
| ACTAGACTGAATTTGTAGAG+AGG | - | chr1_3:4233724-4233743 | None:intergenic | 35.0% | |
| AAATCCAAATTCAGCTTCGT+CGG | + | chr1_3:4233760-4233779 | Msa0098290:CDS | 35.0% | |
| !! | TTTTGTAACGTTGACTAGAG+GGG | - | chr1_3:4233839-4233858 | None:intergenic | 35.0% |
| !! | CATTTTGTAACGTTGACTAG+AGG | - | chr1_3:4233841-4233860 | None:intergenic | 35.0% |
| CTCTAGTCAACGTTACAAAA+TGG | + | chr1_3:4233839-4233858 | Msa0098290:CDS | 35.0% | |
| AACGTTACAAAATGGCGTAA+AGG | + | chr1_3:4233847-4233866 | Msa0098290:CDS | 35.0% | |
| CTACAGTATTGTTCGAACTT+AGG | - | chr1_3:4233937-4233956 | None:intergenic | 35.0% | |
| AACCATGTTAACCATTCAAG+CGG | + | chr1_3:4233990-4234009 | Msa0098290:CDS | 35.0% | |
| ! | TTTTCCAAATGTAGCTGGAT+GGG | - | chr1_3:4234070-4234089 | None:intergenic | 35.0% |
| ! | TTTTTCCAAATGTAGCTGGA+TGG | - | chr1_3:4234071-4234090 | None:intergenic | 35.0% |
| !! | TCTGTTTTTCCAAATGTAGC+TGG | - | chr1_3:4234075-4234094 | None:intergenic | 35.0% |
| !!! | GAGTTTTTTGATAGAGTTCG+TGG | + | chr1_3:4234105-4234124 | Msa0098290:CDS | 35.0% |
| !!! | TTTTTTGATAGAGTTCGTGG+AGG | + | chr1_3:4234108-4234127 | Msa0098290:CDS | 35.0% |
| CATATCTAACAAAGGTTCCA+AGG | - | chr1_3:4234205-4234224 | None:intergenic | 35.0% | |
| CTTGGAACCTTTGTTAGATA+TGG | + | chr1_3:4234203-4234222 | Msa0098290:CDS | 35.0% | |
| ! | CCTCAATCGACTTATTTCAG+AGG | - | chr1_3:4227652-4227671 | None:intergenic | 40.0% |
| !! | CCTCTGAAATAAGTCGATTG+AGG | + | chr1_3:4227649-4227668 | Msa0098290:intron | 40.0% |
| !! | TAAGGGGCTTTTGAGTAATC+TGG | + | chr1_3:4227747-4227766 | Msa0098290:intron | 40.0% |
| !! | AAGGGGCTTTTGAGTAATCT+GGG | + | chr1_3:4227748-4227767 | Msa0098290:intron | 40.0% |
| GATTGATGAAAGGGATGGTA+TGG | - | chr1_3:4227807-4227826 | Msa0098300:CDS | 40.0% | |
| GAGAACAAGATTATGGCACA+TGG | - | chr1_3:4227920-4227939 | Msa0098300:CDS | 40.0% | |
| TCGAAGTTGTAGACTATGCT+GGG | - | chr1_3:4227969-4227988 | Msa0098300:CDS | 40.0% | |
| ATCGAAGTTGTAGACTATGC+TGG | - | chr1_3:4227970-4227989 | Msa0098300:CDS | 40.0% | |
| TCATAACCCTTAATAGAGGG+TGG | + | chr1_3:4228108-4228127 | Msa0098290:intron | 40.0% | |
| TGGTAACCACCCTCTATTAA+GGG | - | chr1_3:4228117-4228136 | None:intergenic | 40.0% | |
| ATGGTAACCACCCTCTATTA+AGG | - | chr1_3:4228118-4228137 | None:intergenic | 40.0% | |
| !!! | GCATTTTGGAATTCAGAGTG+TGG | + | chr1_3:4228359-4228378 | Msa0098290:CDS | 40.0% |
| ! | ACTTCTTTGGAGAGCTTCTT+TGG | + | chr1_3:4228488-4228507 | Msa0098290:CDS | 40.0% |
| ! | TTTGGGAGAGGTTTCTGAAA+GGG | + | chr1_3:4228598-4228617 | Msa0098290:CDS | 40.0% |
| ! | TTGGCTTGATAAGAAGGAGT+TGG | - | chr1_3:4228654-4228673 | None:intergenic | 40.0% |
| ! | GGAAACTTGGCTTGATAAGA+AGG | - | chr1_3:4228660-4228679 | None:intergenic | 40.0% |
| AACAGATGAAGGAGGAAACT+TGG | - | chr1_3:4228673-4228692 | None:intergenic | 40.0% | |
| TAAGAGACAAATCCCTAGTC+AGG | + | chr1_3:4228698-4228717 | Msa0098290:CDS | 40.0% | |
| ACTCGTCATGTAACAATGAC+GGG | - | chr1_3:4228990-4229009 | None:intergenic | 40.0% | |
| CACTCGTCATGTAACAATGA+CGG | - | chr1_3:4228991-4229010 | None:intergenic | 40.0% | |
| TTGTACTTGATCAGTTCACC+GGG | + | chr1_3:4229187-4229206 | Msa0098290:intron | 40.0% | |
| !! | CTTATGTAGTTCTAGCAACC+CGG | - | chr1_3:4229208-4229227 | None:intergenic | 40.0% |
| GGTCTGTTATCTGTTTGTAG+AGG | + | chr1_3:4229622-4229641 | Msa0098290:intron | 40.0% | |
| TGTTATCTGTTTGTAGAGGG+TGG | + | chr1_3:4229626-4229645 | Msa0098290:intron | 40.0% | |
| GTTATCTGTTTGTAGAGGGT+GGG | + | chr1_3:4229627-4229646 | Msa0098290:intron | 40.0% | |
| TTATCTGTTTGTAGAGGGTG+GGG | + | chr1_3:4229628-4229647 | Msa0098290:intron | 40.0% | |
| TACGTGCAGATCATCCATTT+AGG | - | chr1_3:4229662-4229681 | None:intergenic | 40.0% | |
| ! | TGGATGATCTGCACGTATTT+TGG | + | chr1_3:4229665-4229684 | Msa0098290:intron | 40.0% |
| CTATGATTCTACCTAACTCG+CGG | - | chr1_3:4229745-4229764 | None:intergenic | 40.0% | |
| TTAAATTACGGGGCTTGTCA+AGG | + | chr1_3:4229798-4229817 | Msa0098290:intron | 40.0% | |
| !!! | TGGTTGGTTTTACAGCCATT+TGG | + | chr1_3:4229863-4229882 | Msa0098290:intron | 40.0% |
| ! | CTCAGTATCATCGCATTTTG+TGG | - | chr1_3:4229889-4229908 | None:intergenic | 40.0% |
| TGTGAAGAATAAGGGTGGAA+AGG | + | chr1_3:4229937-4229956 | Msa0098290:intron | 40.0% | |
| GGACAAGCTACAAAACTGTA+GGG | + | chr1_3:4230249-4230268 | Msa0098290:intron | 40.0% | |
| !! | TGATTGGTTTGACAGCCATT+TGG | + | chr1_3:4230334-4230353 | Msa0098290:intron | 40.0% |
| CATCACACTTTATGGCCAAA+TGG | - | chr1_3:4230352-4230371 | None:intergenic | 40.0% | |
| TGTCCATCCTTATTCTTCAC+AGG | - | chr1_3:4230410-4230429 | None:intergenic | 40.0% | |
| TGTGAAGAATAAGGATGGAC+AGG | + | chr1_3:4230409-4230428 | Msa0098290:intron | 40.0% | |
| GCTAGTCCCATACACAATAT+TGG | - | chr1_3:4230651-4230670 | None:intergenic | 40.0% | |
| ! | TGAAATCCTTAAAGTGTCCC+GGG | - | chr1_3:4230838-4230857 | None:intergenic | 40.0% |
| AAATATGGAGAACTCCCTGT+CGG | + | chr1_3:4230951-4230970 | Msa0098290:intron | 40.0% | |
| !! | CCCAATTGCTGACTTAGTTA+AGG | + | chr1_3:4231039-4231058 | Msa0098290:intron | 40.0% |
| TAACAGAATTTGGCAGACAC+AGG | + | chr1_3:4231111-4231130 | Msa0098290:intron | 40.0% | |
| ACACAGGCTACAAAGATGTA+GGG | + | chr1_3:4231127-4231146 | Msa0098290:intron | 40.0% | |
| GAGAAAAAAATTAGGCCGCA+AGG | + | chr1_3:4231149-4231168 | Msa0098290:intron | 40.0% | |
| TTGATACCTAGAGTCTCATC+TGG | - | chr1_3:4231205-4231224 | None:intergenic | 40.0% | |
| TAGACTCGGATCATTTCAAG+TGG | + | chr1_3:4231316-4231335 | Msa0098290:intron | 40.0% | |
| !! | AATTCCTTAAAGAGTGTCCC+GGG | - | chr1_3:4231454-4231473 | None:intergenic | 40.0% |
| !! | GAATTCCTTAAAGAGTGTCC+CGG | - | chr1_3:4231455-4231474 | None:intergenic | 40.0% |
| TAACAGAATTTGGCAGACAC+AGG | + | chr1_3:4231111-4231130 | Msa0098290:intron | 40.0% | |
| ACACAGGCTACAAAGATGTA+GGG | + | chr1_3:4231127-4231146 | Msa0098290:intron | 40.0% | |
| ! | TTTGACTTTCGACAACTGTG+CGG | - | chr1_3:4231829-4231848 | None:intergenic | 40.0% |
| TTTCAAGGAGACTCGTATGA+TGG | + | chr1_3:4231991-4232010 | Msa0098290:intron | 40.0% | |
| ! | TGTCATTTCAGGCATCTCAA+GGG | - | chr1_3:4232033-4232052 | None:intergenic | 40.0% |
| ! | TTGTCATTTCAGGCATCTCA+AGG | - | chr1_3:4232034-4232053 | None:intergenic | 40.0% |
| TGCACTAAACATTAACCTCG+CGG | + | chr1_3:4232110-4232129 | Msa0098290:intron | 40.0% | |
| TGCAAATCGTGTCCTAGTAA+GGG | + | chr1_3:4232158-4232177 | Msa0098290:intron | 40.0% | |
| !!! | TGTCCTAGTAAGGGCATTTT+AGG | + | chr1_3:4232167-4232186 | Msa0098290:intron | 40.0% |
| TTGCTGAGATGATGTTGCAA+TGG | - | chr1_3:4232337-4232356 | None:intergenic | 40.0% | |
| ATTGCAACATCATCTCAGCA+AGG | + | chr1_3:4232336-4232355 | Msa0098290:intron | 40.0% | |
| ! | AAATGCCAAGGAGGTATAGT+GGG | - | chr1_3:4232482-4232501 | None:intergenic | 40.0% |
| ! | AAAATGCCAAGGAGGTATAG+TGG | - | chr1_3:4232483-4232502 | None:intergenic | 40.0% |
| ! | ACTATACCTCCTTGGCATTT+TGG | + | chr1_3:4232482-4232501 | Msa0098290:intron | 40.0% |
| ! | CTATACCTCCTTGGCATTTT+GGG | + | chr1_3:4232483-4232502 | Msa0098290:intron | 40.0% |
| ! | TATACCTCCTTGGCATTTTG+GGG | + | chr1_3:4232484-4232503 | Msa0098290:intron | 40.0% |
| GTGTTATCAATCTTGGATGG+TGG | - | chr1_3:4232524-4232543 | None:intergenic | 40.0% | |
| ACAAGTGATGAACCTAGGTT+AGG | - | chr1_3:4232974-4232993 | None:intergenic | 40.0% | |
| CTTGAACAAGTGATGAACCT+AGG | - | chr1_3:4232979-4232998 | None:intergenic | 40.0% | |
| CTGCGGATATGAATAGCATT+TGG | + | chr1_3:4233159-4233178 | Msa0098290:intron | 40.0% | |
| TTTGGGTAGGATAACATAGC+TGG | + | chr1_3:4233177-4233196 | Msa0098290:intron | 40.0% | |
| !! | AAGTGTTGATGTGTCAAGTG+TGG | + | chr1_3:4233253-4233272 | Msa0098290:intron | 40.0% |
| !! | AGTGTTGATGTGTCAAGTGT+GGG | + | chr1_3:4233254-4233273 | Msa0098290:intron | 40.0% |
| TCCACATCTTCATCCAATGT+CGG | - | chr1_3:4233288-4233307 | None:intergenic | 40.0% | |
| GACACCATATCTTCACCATA+TGG | - | chr1_3:4233339-4233358 | None:intergenic | 40.0% | |
| !! | ATGGTGTCCAAACCACTTTT+TGG | + | chr1_3:4233351-4233370 | Msa0098290:intron | 40.0% |
| AGAGCAACCAAAAAGTGGTT+TGG | - | chr1_3:4233361-4233380 | None:intergenic | 40.0% | |
| GACTAAGAGCAACCAAAAAG+TGG | - | chr1_3:4233366-4233385 | None:intergenic | 40.0% | |
| !!! | TGCATCTGTTGCTTTTGCTT+AGG | + | chr1_3:4233533-4233552 | Msa0098290:intron | 40.0% |
| TTCTTGTTCAGATTGCTGAG+TGG | + | chr1_3:4233599-4233618 | Msa0098290:intron | 40.0% | |
| TCTTGTTCAGATTGCTGAGT+GGG | + | chr1_3:4233600-4233619 | Msa0098290:intron | 40.0% | |
| TACTTGACATCTCCAATGAG+CGG | + | chr1_3:4233671-4233690 | Msa0098290:CDS | 40.0% | |
| GTAGAGAGGGATACATGATT+CGG | - | chr1_3:4233710-4233729 | None:intergenic | 40.0% | |
| ! | TTTGATGATCCTGGTCCATA+CGG | + | chr1_3:4233787-4233806 | Msa0098290:CDS | 40.0% |
| GTTCGAACAATACTGTAGAC+CGG | + | chr1_3:4233939-4233958 | Msa0098290:CDS | 40.0% | |
| GCTTGAATGGTTAACATGGT+TGG | - | chr1_3:4233991-4234010 | None:intergenic | 40.0% | |
| ACCATGTTAACCATTCAAGC+GGG | + | chr1_3:4233991-4234010 | Msa0098290:CDS | 40.0% | |
| ! | AAAATTTGCTCCTAGTGCCT+TGG | + | chr1_3:4234185-4234204 | Msa0098290:CDS | 40.0% |
| !! | AGTGTCAAAGAGTACCAGCA+AGG | + | chr1_3:4227435-4227454 | Msa0098290:five_prime_UTR | 45.0% |
| ! | TTTTGCGTGATTGTCCTTGC+TGG | - | chr1_3:4227452-4227471 | None:intergenic | 45.0% |
| TGAAAGGGATGGTATGGTAC+AGG | - | chr1_3:4227801-4227820 | Msa0098300:CDS | 45.0% | |
| GGTCGGAGAGAACAAGATTA+TGG | - | chr1_3:4227927-4227946 | Msa0098300:CDS | 45.0% | |
| !! | AACGTGCTGGTTTGGAACAA+TGG | + | chr1_3:4228421-4228440 | Msa0098290:CDS | 45.0% |
| GAGGCAATGGTCCTTTAGTA+AGG | - | chr1_3:4228569-4228588 | None:intergenic | 45.0% | |
| ATTGCCTCTTGCACCTGTTT+GGG | + | chr1_3:4228581-4228600 | Msa0098290:CDS | 45.0% | |
| TTCAGAAACCTCTCCCAAAC+AGG | - | chr1_3:4228597-4228616 | None:intergenic | 45.0% | |
| GTTTGGGAGAGGTTTCTGAA+AGG | + | chr1_3:4228597-4228616 | Msa0098290:CDS | 45.0% | |
| ATGACGAGTGTTATCAGTCG+CGG | + | chr1_3:4229001-4229020 | Msa0098290:intron | 45.0% | |
| CGGGTTGCTAGAACTACATA+AGG | + | chr1_3:4229206-4229225 | Msa0098290:intron | 45.0% | |
| ACTTCCATGTCTCTTCTTGG+AGG | - | chr1_3:4229585-4229604 | None:intergenic | 45.0% | |
| TATCTGTTTGTAGAGGGTGG+GGG | + | chr1_3:4229629-4229648 | Msa0098290:intron | 45.0% | |
| ! | CATCGCATTTTGTGGCCAAA+TGG | - | chr1_3:4229881-4229900 | None:intergenic | 45.0% |
| CGGACAAGCTACAAAACTGT+AGG | + | chr1_3:4230248-4230267 | Msa0098290:intron | 45.0% | |
| ACTATAGCGCTGTAGCATAG+CGG | + | chr1_3:4230546-4230565 | Msa0098290:intron | 45.0% | |
| ! | GAAATCCTTAAAGTGTCCCG+GGG | - | chr1_3:4230837-4230856 | None:intergenic | 45.0% |
| GACACAGGCTACAAAGATGT+AGG | + | chr1_3:4231126-4231145 | Msa0098290:intron | 45.0% | |
| TCAGAACCAGATGAGACTCT+AGG | + | chr1_3:4231196-4231215 | Msa0098290:intron | 45.0% | |
| !! | ATTCCTTAAAGAGTGTCCCG+GGG | - | chr1_3:4231453-4231472 | None:intergenic | 45.0% |
| TAAAAGCTGCCAACCAAGTC+GGG | - | chr1_3:4231631-4231650 | None:intergenic | 45.0% | |
| CTAAAAGCTGCCAACCAAGT+CGG | - | chr1_3:4231632-4231651 | None:intergenic | 45.0% | |
| GACACAGGCTACAAAGATGT+AGG | + | chr1_3:4231126-4231145 | Msa0098290:intron | 45.0% | |
| GTCATTTCAGGCATCTCAAG+GGG | - | chr1_3:4232032-4232051 | None:intergenic | 45.0% | |
| CTGCAAATCGTGTCCTAGTA+AGG | + | chr1_3:4232157-4232176 | Msa0098290:intron | 45.0% | |
| ! | TTGCTAGAGAGAGAAGCACA+AGG | - | chr1_3:4232227-4232246 | None:intergenic | 45.0% |
| TACTACCCACTATACCTCCT+TGG | + | chr1_3:4232474-4232493 | Msa0098290:intron | 45.0% | |
| !! | TCTTGGATGGTGGAGCAAAA+TGG | - | chr1_3:4232514-4232533 | None:intergenic | 45.0% |
| ! | GTTCTGTCACTTCCTAACCT+AGG | + | chr1_3:4232959-4232978 | Msa0098290:intron | 45.0% |
| TCCGACATTGGATGAAGATG+TGG | + | chr1_3:4233284-4233303 | Msa0098290:intron | 45.0% | |
| TGAGCAGCTATACAAGTGAG+AGG | + | chr1_3:4233311-4233330 | Msa0098290:intron | 45.0% | |
| GAGCAGCTATACAAGTGAGA+GGG | + | chr1_3:4233312-4233331 | Msa0098290:intron | 45.0% | |
| AGTTCTCTGTTGGGTCATGA+GGG | - | chr1_3:4233411-4233430 | None:intergenic | 45.0% | |
| CTTGTTCAGATTGCTGAGTG+GGG | + | chr1_3:4233601-4233620 | Msa0098290:intron | 45.0% | |
| AATGGCGTAAAGGCTCTCAA+TGG | + | chr1_3:4233857-4233876 | Msa0098290:CDS | 45.0% | |
| GGTGTCTTCCACAATATGGA+CGG | - | chr1_3:4233905-4233924 | None:intergenic | 45.0% | |
| ATGCGGTGTCTTCCACAATA+TGG | - | chr1_3:4233909-4233928 | None:intergenic | 45.0% | |
| CCATGTTAACCATTCAAGCG+GGG | + | chr1_3:4233992-4234011 | Msa0098290:CDS | 45.0% | |
| TGGCAAATCGGAGCATAACT+TGG | + | chr1_3:4234022-4234041 | Msa0098290:CDS | 45.0% | |
| GGCAAATCGGAGCATAACTT+GGG | + | chr1_3:4234023-4234042 | Msa0098290:CDS | 45.0% | |
| AAATCGGAGCATAACTTGGG+TGG | + | chr1_3:4234026-4234045 | Msa0098290:CDS | 45.0% | |
| ! | AACAAAGGTTCCAAGGCACT+AGG | - | chr1_3:4234198-4234217 | None:intergenic | 45.0% |
| ATGGTGATTGCCTCATTGGA+TGG | + | chr1_3:4234346-4234365 | Msa0098290:three_prime_UTR | 45.0% | |
| CTAGCATTCACCATCCAATG+AGG | - | chr1_3:4234359-4234378 | None:intergenic | 45.0% | |
| GGATGGTGAATGCTAGATGA+TGG | + | chr1_3:4234363-4234382 | Msa0098290:three_prime_UTR | 45.0% | |
| TTGTCGTGCACACGAGCATA+GGG | - | chr1_3:4227488-4227507 | None:intergenic | 50.0% | |
| TTTGTCGTGCACACGAGCAT+AGG | - | chr1_3:4227489-4227508 | None:intergenic | 50.0% | |
| AAGGGATGGTATGGTACAGG+AGG | - | chr1_3:4227798-4227817 | Msa0098300:CDS | 50.0% | |
| CAAGATGCAATCGAGGGCTT+TGG | + | chr1_3:4228227-4228246 | Msa0098290:exon | 50.0% | |
| ! | AGGGCTTTGGCATCTGAAGA+AGG | + | chr1_3:4228240-4228259 | Msa0098290:CDS | 50.0% |
| !! | CGTTGAAGAACGTGCTGGTT+TGG | + | chr1_3:4228413-4228432 | Msa0098290:CDS | 50.0% |
| CAAACAGGTGCAAGAGGCAA+TGG | - | chr1_3:4228582-4228601 | None:intergenic | 50.0% | |
| CATTGCCTCTTGCACCTGTT+TGG | + | chr1_3:4228580-4228599 | Msa0098290:CDS | 50.0% | |
| GCTTCCTCCAAGAAGAGACA+TGG | + | chr1_3:4229578-4229597 | Msa0098290:intron | 50.0% | |
| ATCTGTTTGTAGAGGGTGGG+GGG | + | chr1_3:4229630-4229649 | Msa0098290:intron | 50.0% | |
| AGGGAGAAGATTAGGCAGCA+TGG | + | chr1_3:4230268-4230287 | Msa0098290:intron | 50.0% | |
| GCTATGCTACAGCGCTATAG+TGG | - | chr1_3:4230547-4230566 | None:intergenic | 50.0% | |
| TCAGCTAAAAGCTGCCGACA+GGG | - | chr1_3:4230968-4230987 | None:intergenic | 50.0% | |
| AAATGCTAACAAGTGCCCCC+GGG | - | chr1_3:4231582-4231601 | None:intergenic | 50.0% | |
| GAAATGCTAACAAGTGCCCC+CGG | - | chr1_3:4231583-4231602 | None:intergenic | 50.0% | |
| ATATGGAGAACTCCCCGACT+TGG | + | chr1_3:4231615-4231634 | Msa0098290:intron | 50.0% | |
| AAAAGCTGCCAACCAAGTCG+GGG | - | chr1_3:4231630-4231649 | None:intergenic | 50.0% | |
| GAGGGCTTCCTGTTTGATGT+AGG | - | chr1_3:4231690-4231709 | None:intergenic | 50.0% | |
| AGTCTAGTGCTAAAACCGCG+AGG | - | chr1_3:4232128-4232147 | None:intergenic | 50.0% | |
| GACACGATTTGCAGCATCTG+TGG | - | chr1_3:4232151-4232170 | None:intergenic | 50.0% | |
| ! | GAGAGAAGCACAAGGTTGAG+AGG | - | chr1_3:4232219-4232238 | None:intergenic | 50.0% |
| AACAGAGGTCTGCACAGAGA+TGG | - | chr1_3:4232257-4232276 | None:intergenic | 50.0% | |
| AGCTCTGCAGCAAGAAACAG+AGG | - | chr1_3:4232272-4232291 | None:intergenic | 50.0% | |
| GGATGAAACTGACCACGATG+AGG | - | chr1_3:4232316-4232335 | None:intergenic | 50.0% | |
| !! | GTGGGTTAGAAGTCCGACAT+TGG | + | chr1_3:4233272-4233291 | Msa0098290:intron | 50.0% |
| TACAAGTGAGAGGGCCCATA+TGG | + | chr1_3:4233321-4233340 | Msa0098290:intron | 50.0% | |
| GGGCCCATATGGTGAAGATA+TGG | + | chr1_3:4233332-4233351 | Msa0098290:intron | 50.0% | |
| TAGTCTACCGTGATGATCCC+TGG | + | chr1_3:4233381-4233400 | Msa0098290:intron | 50.0% | |
| AGTCTACCGTGATGATCCCT+GGG | + | chr1_3:4233382-4233401 | Msa0098290:intron | 50.0% | |
| GTTCTCTGTTGGGTCATGAG+GGG | - | chr1_3:4233410-4233429 | None:intergenic | 50.0% | |
| CAGTTCTCTGTTGGGTCATG+AGG | - | chr1_3:4233412-4233431 | None:intergenic | 50.0% | |
| TTCAGATTGCTGAGTGGGGA+AGG | + | chr1_3:4233605-4233624 | Msa0098290:intron | 50.0% | |
| ! | TGCACCGACGAAGCTGAATT+TGG | - | chr1_3:4233767-4233786 | None:intergenic | 50.0% |
| ! | GTCGGTGCATTTGATGATCC+TGG | + | chr1_3:4233778-4233797 | Msa0098290:CDS | 50.0% |
| TTGTAGCGTCCTCTTCCGTA+TGG | - | chr1_3:4233805-4233824 | None:intergenic | 50.0% | |
| AGGACGCTACAACCCAAACA+TGG | + | chr1_3:4233813-4233832 | Msa0098290:CDS | 50.0% | |
| TGACTAGAGGGGCCATGTTT+GGG | - | chr1_3:4233828-4233847 | None:intergenic | 50.0% | |
| TTGACTAGAGGGGCCATGTT+TGG | - | chr1_3:4233829-4233848 | None:intergenic | 50.0% | |
| CAAGCTTGCCGTCCATATTG+TGG | + | chr1_3:4233894-4233913 | Msa0098290:CDS | 50.0% | |
| TGCTCGTCGACATAACAAGC+CGG | - | chr1_3:4233961-4233980 | None:intergenic | 50.0% | |
| CCCCGCTTGAATGGTTAACA+TGG | - | chr1_3:4233995-4234014 | None:intergenic | 50.0% | |
| GGAGCATAACTTGGGTGGAT+TGG | + | chr1_3:4234031-4234050 | Msa0098290:CDS | 50.0% | |
| !! | ACTTGGGTGGATTGGTCTAG+AGG | + | chr1_3:4234039-4234058 | Msa0098290:CDS | 50.0% |
| TGGCATGGTGATTGCCTCAT+TGG | + | chr1_3:4234342-4234361 | Msa0098290:three_prime_UTR | 50.0% | |
| CCAGCACGTTCTTCAACGCA+TGG | - | chr1_3:4228411-4228430 | None:intergenic | 55.0% | |
| CCATGCGTTGAAGAACGTGC+TGG | + | chr1_3:4228408-4228427 | Msa0098290:CDS | 55.0% | |
| CTCTCCCAAACAGGTGCAAG+AGG | - | chr1_3:4228588-4228607 | None:intergenic | 55.0% | |
| CTCTTGCACCTGTTTGGGAG+AGG | + | chr1_3:4228586-4228605 | Msa0098290:CDS | 55.0% | |
| GTGGGGGGTAACAGCCTAAA+TGG | + | chr1_3:4229645-4229664 | Msa0098290:intron | 55.0% | |
| TTCGGATTTGGCCGCGAGTT+AGG | + | chr1_3:4229731-4229750 | Msa0098290:intron | 55.0% | |
| !! | TTCCCATTGAAGAGTGCCCC+CGG | + | chr1_3:4230901-4230920 | Msa0098290:intron | 55.0% |
| TGGGAGATGCTAACGAGTGC+CGG | - | chr1_3:4230923-4230942 | None:intergenic | 55.0% | |
| CTCAGCTAAAAGCTGCCGAC+AGG | - | chr1_3:4230969-4230988 | None:intergenic | 55.0% | |
| GGGGGCTTCCTGTTTGATGT+AGG | - | chr1_3:4231022-4231041 | None:intergenic | 55.0% | |
| GGTCTTGCTAATGAGTGCCC+CGG | + | chr1_3:4231433-4231452 | Msa0098290:intron | 55.0% | |
| GTCTTGCTAATGAGTGCCCC+GGG | + | chr1_3:4231434-4231453 | Msa0098290:intron | 55.0% | |
| !! | AAGGCCCTTAAAGAGTGCCC+CGG | + | chr1_3:4231561-4231580 | Msa0098290:intron | 55.0% |
| AATGCTAACAAGTGCCCCCG+GGG | - | chr1_3:4231581-4231600 | None:intergenic | 55.0% | |
| GTTTCTTGCTGCAGAGCTGC+TGG | + | chr1_3:4232274-4232293 | Msa0098290:intron | 55.0% | |
| !!! | CCTCCTTGGCATTTTGGGGT+CGG | + | chr1_3:4232488-4232507 | Msa0098290:intron | 55.0% |
| GATCCTGGTCCATACGGAAG+AGG | + | chr1_3:4233793-4233812 | Msa0098290:CDS | 55.0% | |
| CAACACACTCCCCGCTTGAA+TGG | - | chr1_3:4234004-4234023 | None:intergenic | 55.0% | |
| ! | CATTCAAGCGGGGAGTGTGT+TGG | + | chr1_3:4234002-4234021 | Msa0098290:CDS | 55.0% |
| ! | CGGGGAGTGTGTTGGCAAAT+CGG | + | chr1_3:4234010-4234029 | Msa0098290:CDS | 55.0% |
| !! | TGGGTGGATTGGTCTAGAGG+TGG | + | chr1_3:4234042-4234061 | Msa0098290:CDS | 55.0% |
| !! | GGGTGGATTGGTCTAGAGGT+GGG | + | chr1_3:4234043-4234062 | Msa0098290:CDS | 55.0% |
| !! | GGTGGATTGGTCTAGAGGTG+GGG | + | chr1_3:4234044-4234063 | Msa0098290:CDS | 55.0% |
| TCGTGCACACGAGCATAGGG+TGG | - | chr1_3:4227485-4227504 | None:intergenic | 60.0% | |
| GGTCTTGCTAACGAGTGCCC+CGG | + | chr1_3:4230817-4230836 | Msa0098290:intron | 60.0% | |
| GTCTTGCTAACGAGTGCCCC+GGG | + | chr1_3:4230818-4230837 | Msa0098290:intron | 60.0% | |
| GAGTGCCCCGGGACACTTTA+AGG | + | chr1_3:4230829-4230848 | Msa0098290:intron | 60.0% | |
| !! | TGCCGGGGGCACTCTTCAAT+GGG | - | chr1_3:4230906-4230925 | None:intergenic | 60.0% |
| !! | GAGATGCTAACGAGTGCCGG+GGG | - | chr1_3:4230920-4230939 | None:intergenic | 60.0% |
| ! | GGAGATGCTAACGAGTGCCG+GGG | - | chr1_3:4230921-4230940 | None:intergenic | 60.0% |
| GGGAGATGCTAACGAGTGCC+GGG | - | chr1_3:4230922-4230941 | None:intergenic | 60.0% | |
| GTGCCCCGGGACACTCTTTA+AGG | + | chr1_3:4231447-4231466 | Msa0098290:intron | 60.0% | |
| !! | AGGCCCTTAAAGAGTGCCCC+GGG | + | chr1_3:4231562-4231581 | Msa0098290:intron | 60.0% |
| !! | GGAGAACTCCCCGACTTGGT+TGG | + | chr1_3:4231619-4231638 | Msa0098290:intron | 60.0% |
| CCGACCCCAAAATGCCAAGG+AGG | - | chr1_3:4232491-4232510 | None:intergenic | 60.0% | |
| TGGCCGACCCCAAAATGCCA+AGG | - | chr1_3:4232494-4232513 | None:intergenic | 60.0% | |
| GGGGAACCCAGGGATCATCA+CGG | - | chr1_3:4233391-4233410 | None:intergenic | 60.0% | |
| TGGGTCATGAGGGGAACCCA+GGG | - | chr1_3:4233401-4233420 | None:intergenic | 60.0% | |
| TTGGGTCATGAGGGGAACCC+AGG | - | chr1_3:4233402-4233421 | None:intergenic | 60.0% | |
| CGTCCTCTTCCGTATGGACC+AGG | - | chr1_3:4233799-4233818 | None:intergenic | 60.0% | |
| GGGGCCCATCCAGCTACATT+TGG | + | chr1_3:4234063-4234082 | Msa0098290:CDS | 60.0% | |
| !! | GTGCCGGGGGCACTCTTCAA+TGG | - | chr1_3:4230907-4230926 | None:intergenic | 65.0% |
| !! | GGCCCTTAAAGAGTGCCCCG+GGG | + | chr1_3:4231563-4231582 | Msa0098290:intron | 65.0% |
| !! | GCCCTTAAAGAGTGCCCCGG+GGG | + | chr1_3:4231564-4231583 | Msa0098290:intron | 65.0% |
| ! | GCCCCCGGGGCACTCTTTAA+GGG | - | chr1_3:4231568-4231587 | None:intergenic | 65.0% |
| ! | TGCCCCCGGGGCACTCTTTA+AGG | - | chr1_3:4231569-4231588 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 4227425 | 4234485 | 4227425 | ID=Msa0098290;Name=Msa0098290 |
| chr1_3 | mRNA | 4227425 | 4234485 | 4227425 | ID=Msa0098290-mRNA-1;Parent=Msa0098290;Name=Msa0098290-mRNA-1;_AED=0.14;_eAED=0.14;_QI=54|1|1|1|0.5|0.33|3|234|376 |
| chr1_3 | exon | 4227425 | 4227474 | 4227425 | ID=Msa0098290-mRNA-1:exon:1403;Parent=Msa0098290-mRNA-1 |
| chr1_3 | exon | 4228227 | 4228719 | 4228227 | ID=Msa0098290-mRNA-1:exon:1404;Parent=Msa0098290-mRNA-1 |
| chr1_3 | exon | 4233610 | 4234485 | 4233610 | ID=Msa0098290-mRNA-1:exon:1405;Parent=Msa0098290-mRNA-1 |
| chr1_3 | five_prime_UTR | 4227425 | 4227474 | 4227425 | ID=Msa0098290-mRNA-1:five_prime_utr;Parent=Msa0098290-mRNA-1 |
| chr1_3 | five_prime_UTR | 4228227 | 4228230 | 4228227 | ID=Msa0098290-mRNA-1:five_prime_utr;Parent=Msa0098290-mRNA-1 |
| chr1_3 | CDS | 4228231 | 4228719 | 4228231 | ID=Msa0098290-mRNA-1:cds;Parent=Msa0098290-mRNA-1 |
| chr1_3 | CDS | 4233610 | 4234251 | 4233610 | ID=Msa0098290-mRNA-1:cds;Parent=Msa0098290-mRNA-1 |
| chr1_3 | three_prime_UTR | 4234252 | 4234485 | 4234252 | ID=Msa0098290-mRNA-1:three_prime_utr;Parent=Msa0098290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
