Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054170 | XP_039684571.1 | 95.992 | 524 | 18 | 1 | 1 | 521 | 1 | 524 | 0.0 | 966 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054170 | sp|Q9FZL4|MGDG_SOYBN | 77.159 | 521 | 103 | 6 | 8 | 521 | 5 | 516 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054170 | A0A396GED1 | 95.992 | 524 | 18 | 1 | 1 | 521 | 1 | 524 | 0.0 | 966 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005450 | Msa0054170 | 0.979822 | 8.069234e-149 | -8.615850e-47 |
| Msa0054170 | Msa0086020 | -0.833867 | 4.166109e-56 | -8.615850e-47 |
| Msa0054170 | Msa1353800 | 0.966732 | 2.575947e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054170 | MtrunA17_Chr8g0347051 | 95.992 | 524 | 18 | 1 | 1 | 521 | 1 | 524 | 0.0 | 966 |
| Msa0054170 | MtrunA17_Chr1g0150361 | 95.247 | 526 | 19 | 2 | 1 | 521 | 1 | 525 | 0.0 | 959 |
| Msa0054170 | MtrunA17_Chr4g0064711 | 61.026 | 390 | 150 | 1 | 134 | 521 | 57 | 446 | 8.48e-169 | 487 |
| Msa0054170 | MtrunA17_Chr8g0347041 | 98.901 | 91 | 1 | 0 | 132 | 222 | 88 | 178 | 4.57e-59 | 196 |
| Msa0054170 | MtrunA17_Chr8g0347341 | 97.802 | 91 | 2 | 0 | 132 | 222 | 88 | 178 | 6.71e-57 | 192 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054170 | AT4G31780.2 | 69.508 | 528 | 145 | 7 | 1 | 521 | 1 | 519 | 0.0 | 721 |
| Msa0054170 | AT4G31780.3 | 66.245 | 554 | 145 | 8 | 1 | 521 | 1 | 545 | 0.0 | 706 |
| Msa0054170 | AT4G31780.1 | 83.768 | 345 | 54 | 1 | 179 | 521 | 8 | 352 | 0.0 | 606 |
| Msa0054170 | AT2G11810.1 | 60.051 | 393 | 155 | 1 | 131 | 521 | 58 | 450 | 1.60e-170 | 491 |
| Msa0054170 | AT5G20410.1 | 59.045 | 398 | 161 | 1 | 126 | 521 | 49 | 446 | 1.75e-166 | 481 |
| Msa0054170 | AT2G11810.4 | 61.538 | 325 | 123 | 1 | 199 | 521 | 3 | 327 | 1.41e-140 | 410 |
| Msa0054170 | AT2G11810.2 | 57.237 | 304 | 128 | 1 | 131 | 432 | 58 | 361 | 9.52e-122 | 363 |
| Msa0054170 | AT2G11810.3 | 56.863 | 306 | 130 | 1 | 131 | 434 | 58 | 363 | 1.58e-121 | 363 |
Find 140 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCATGCATTCTTCAATTT+TGG | 0.143640 | 1_2:-8862426 | None:intergenic |
| GTAGGCCATAAATCTTTATT+TGG | 0.144917 | 1_2:-8860668 | None:intergenic |
| GATGAACTAAGGAGAGATTT+AGG | 0.146974 | 1_2:+8861613 | Msa0054170:CDS |
| AGTTAATTATTGTAATAAAA+TGG | 0.199176 | 1_2:-8857889 | None:intergenic |
| TCCAGCCTTCATTGCCCTTT+TGG | 0.207960 | 1_2:-8860634 | None:intergenic |
| AGGTGTTTATTACCGATTTA+TGG | 0.217636 | 1_2:+8859186 | Msa0054170:intron |
| GTTCCCTATGTTGTTGAAAA+TGG | 0.232287 | 1_2:+8863081 | Msa0054170:CDS |
| CAAACCCAAATAAAGATTTA+TGG | 0.240574 | 1_2:+8860663 | Msa0054170:CDS |
| GGGAATGGTGTTGGTGGAAA+TGG | 0.257208 | 1_2:+8858276 | Msa0054170:CDS |
| GGTTGAAGAGGTTAAGGTTT+TGG | 0.268173 | 1_2:-8857826 | None:intergenic |
| TGTTCTCAGCAAGTGATCTT+TGG | 0.275502 | 1_2:+8864204 | Msa0054170:intron |
| GTAATAAAATGGAATATAAA+TGG | 0.278091 | 1_2:-8857878 | None:intergenic |
| GGTGGTGGTGTTGGTGGTGA+GGG | 0.289092 | 1_2:+8858255 | Msa0054170:CDS |
| TGGTGGTGGTGTTGGTGGTG+AGG | 0.295208 | 1_2:+8858254 | Msa0054170:CDS |
| AGAATATGGCGATGATTATC+AGG | 0.317694 | 1_2:+8858440 | Msa0054170:CDS |
| TCCGATTGGATTCGCTTCGC+TGG | 0.325021 | 1_2:+8858215 | Msa0054170:CDS |
| GTGAACATGCTTCTGAAGTT+AGG | 0.332228 | 1_2:-8858026 | None:intergenic |
| ATGAACTAAGGAGAGATTTA+GGG | 0.343617 | 1_2:+8861614 | Msa0054170:CDS |
| ATGTAATCATTTAAAATAAT+AGG | 0.345699 | 1_2:-8862595 | None:intergenic |
| ACAAACTCAGTTCTATTGAT+TGG | 0.345962 | 1_2:+8861794 | Msa0054170:CDS |
| ATGGCCTCTGCAATTGTCCC+TGG | 0.362907 | 1_2:-8862559 | None:intergenic |
| AAAATTGTTGCGGACTGGTT+TGG | 0.366157 | 1_2:+8863141 | Msa0054170:CDS |
| TAATGAGGTTGAAGAGGTTA+AGG | 0.368271 | 1_2:-8857832 | None:intergenic |
| TGCACACTGATTATTATATC+AGG | 0.373255 | 1_2:-8860368 | None:intergenic |
| TAGGCCATAAATCTTTATTT+GGG | 0.377476 | 1_2:-8860667 | None:intergenic |
| TCTTCCTGCTGTATTATTGA+TGG | 0.378039 | 1_2:+8861648 | Msa0054170:CDS |
| TGGCATACCTTTGGCCGAAC+AGG | 0.379500 | 1_2:-8860714 | None:intergenic |
| TTTATAAAGGAAGGTCTAAC+AGG | 0.381701 | 1_2:-8860690 | None:intergenic |
| GTGGTGGTGTTGGTGGTGAG+GGG | 0.391464 | 1_2:+8858256 | Msa0054170:CDS |
| CTTCCTGCTGTATTATTGAT+GGG | 0.393576 | 1_2:+8861649 | Msa0054170:CDS |
| GGTGGTGAGGGGAATGGTGT+TGG | 0.397626 | 1_2:+8858267 | Msa0054170:CDS |
| GGTGTTGGTGGTGAGGGGAA+TGG | 0.402477 | 1_2:+8858261 | Msa0054170:CDS |
| GTTGATGACGGTGGTGGTGG+TGG | 0.406284 | 1_2:+8858240 | Msa0054170:CDS |
| TGAGTTGAGTTGAGTTGAGT+TGG | 0.406708 | 1_2:-8857685 | None:intergenic |
| TTTGAATTAGGTTCACGAAT+TGG | 0.407713 | 1_2:+8857970 | Msa0054170:CDS |
| GCGGTGGTGGTTATAAGTTT+AGG | 0.412585 | 1_2:+8858142 | Msa0054170:CDS |
| GGAATGGTGTTGGTGGAAAT+GGG | 0.413937 | 1_2:+8858277 | Msa0054170:CDS |
| TGGCCGAACAGGCTTTATAA+AGG | 0.422561 | 1_2:-8860703 | None:intergenic |
| TGTTGGTGGAAATGGGAATC+GGG | 0.425641 | 1_2:+8858284 | Msa0054170:CDS |
| TTGTGGAGGATGACCTACTA+TGG | 0.432904 | 1_2:+8859278 | Msa0054170:CDS |
| GTGTTGGTGGAAATGGGAAT+CGG | 0.433262 | 1_2:+8858283 | Msa0054170:CDS |
| GGAGTTGATGACGGTGGTGG+TGG | 0.440641 | 1_2:+8858237 | Msa0054170:CDS |
| CCGATTGGATTCGCTTCGCT+GGG | 0.440816 | 1_2:+8858216 | Msa0054170:CDS |
| CTTCCTTTATAAAGCCTGTT+CGG | 0.450461 | 1_2:+8860700 | Msa0054170:CDS |
| AAATGATTACATTGCCGGGC+AGG | 0.456227 | 1_2:+8862606 | Msa0054170:CDS |
| TGATGTGGAAGATGAAGGAT+TGG | 0.459972 | 1_2:+8858308 | Msa0054170:CDS |
| TTGGGATTGAAGAGTGGTGA+GGG | 0.460128 | 1_2:+8858327 | Msa0054170:CDS |
| GAGTTGAGTTGAGTTGAGTT+GGG | 0.461490 | 1_2:-8857684 | None:intergenic |
| TGCATTAAAACTAGCAAGGC+CGG | 0.462786 | 1_2:+8863200 | Msa0054170:CDS |
| GCCAAAAGGGCAATGAAGGC+TGG | 0.464526 | 1_2:+8860633 | Msa0054170:CDS |
| CGGGTTGATGTGGAAGATGA+AGG | 0.465885 | 1_2:+8858303 | Msa0054170:CDS |
| TGCCCGAGCAGTAGCTTCAA+TGG | 0.468895 | 1_2:-8861692 | None:intergenic |
| TAGTGTATCAATACCTTCAC+TGG | 0.470804 | 1_2:-8861823 | None:intergenic |
| TTCCTTTGATTTCAGGAAGC+GGG | 0.473906 | 1_2:+8863054 | Msa0054170:intron |
| GGTGAGGGGAATGGTGTTGG+TGG | 0.474033 | 1_2:+8858270 | Msa0054170:CDS |
| AATAGGCAGGCCTCGAATCA+TGG | 0.478545 | 1_2:-8862578 | None:intergenic |
| GAAGCTACTGCTCGGGCACT+TGG | 0.480129 | 1_2:+8861697 | Msa0054170:CDS |
| CAACTACAGATGTTGCCAAA+AGG | 0.481512 | 1_2:+8860619 | Msa0054170:CDS |
| CCCAGCGAAGCGAATCCAAT+CGG | 0.484023 | 1_2:-8858216 | None:intergenic |
| TGTTGCCAAAAGGGCAATGA+AGG | 0.487028 | 1_2:+8860629 | Msa0054170:CDS |
| AACTACAGATGTTGCCAAAA+GGG | 0.488345 | 1_2:+8860620 | Msa0054170:CDS |
| TAATTAGAAAGAAGTGAAGC+TGG | 0.489003 | 1_2:-8858048 | None:intergenic |
| TACCAAAATTGAAGAATGCA+TGG | 0.490489 | 1_2:+8862424 | Msa0054170:CDS |
| TGGCCTCTGCAATTGTCCCT+GGG | 0.498243 | 1_2:-8862558 | None:intergenic |
| GAGAGATTTAGGGATGGATG+AGG | 0.498586 | 1_2:+8861624 | Msa0054170:CDS |
| TTCATTCATCGGAGAAAATG+AGG | 0.501011 | 1_2:-8857791 | None:intergenic |
| TTCCTGCTGTATTATTGATG+GGG | 0.501628 | 1_2:+8861650 | Msa0054170:CDS |
| TCCCATTGAAGCTACTGCTC+GGG | 0.505735 | 1_2:+8861690 | Msa0054170:CDS |
| TTCTCTAATAGGATGAACTA+AGG | 0.511639 | 1_2:+8861602 | Msa0054170:intron |
| AGTTTAAACAATAGCGGTGG+TGG | 0.514164 | 1_2:+8858129 | Msa0054170:CDS |
| GCCCGAGCAGTAGCTTCAAT+GGG | 0.516727 | 1_2:-8861691 | None:intergenic |
| ACGTGGGGCCGTTCCATAGT+AGG | 0.519039 | 1_2:-8859291 | None:intergenic |
| TAGCGAAAATTGTTGCGGAC+TGG | 0.524664 | 1_2:+8863136 | Msa0054170:CDS |
| TGAGGGGAAGAAAGTGAAGA+AGG | 0.529010 | 1_2:+8858344 | Msa0054170:CDS |
| CTGTTAGGGTTCATTGTGAG+AGG | 0.529931 | 1_2:+8858190 | Msa0054170:CDS |
| AAATGGGAATCGGGTTGATG+TGG | 0.534846 | 1_2:+8858293 | Msa0054170:CDS |
| TATGTTGTTGAAAATGGTTG+TGG | 0.536014 | 1_2:+8863087 | Msa0054170:CDS |
| ATTGTTTAAACTGAGTGAAA+CGG | 0.538925 | 1_2:-8858118 | None:intergenic |
| GTGTGAGGTTGTTGAAGTAA+AGG | 0.540601 | 1_2:-8858071 | None:intergenic |
| CTGGGAGTTGATGACGGTGG+TGG | 0.541803 | 1_2:+8858234 | Msa0054170:CDS |
| TATAAAGCCTGTTCGGCCAA+AGG | 0.541804 | 1_2:+8860707 | Msa0054170:CDS |
| GTCCCATTGAAGCTACTGCT+CGG | 0.543348 | 1_2:+8861689 | Msa0054170:CDS |
| TTACTAGCTCGTGCATGTCA+TGG | 0.545685 | 1_2:-8863242 | None:intergenic |
| AAAGTACTCTAAATTGCCTA+AGG | 0.546044 | 1_2:+8863110 | Msa0054170:CDS |
| AGAGGAACGTGTTGCATCAG+TGG | 0.547034 | 1_2:-8860392 | None:intergenic |
| TGTTTGTTTGTTTATTGCAG+AGG | 0.547926 | 1_2:-8857751 | None:intergenic |
| TCCTGCTGTATTATTGATGG+GGG | 0.548155 | 1_2:+8861651 | Msa0054170:CDS |
| CTTTGTAATAATGCAATCAC+AGG | 0.552893 | 1_2:-8862450 | None:intergenic |
| TTTGTGTAATGAGGTTGAAG+AGG | 0.554343 | 1_2:-8857838 | None:intergenic |
| CTGTGATTGCATTATTACAA+AGG | 0.560129 | 1_2:+8862451 | Msa0054170:CDS |
| TGTGTGCTCAGACCATAAAT+CGG | 0.560704 | 1_2:-8859198 | None:intergenic |
| GGAATTTGATTGAACGGCCA+AGG | 0.560974 | 1_2:-8859221 | None:intergenic |
| CAACTTCAACATTCATAGCT+CGG | 0.561242 | 1_2:+8859339 | Msa0054170:CDS |
| GCTTCGCTGGGAGTTGATGA+CGG | 0.562992 | 1_2:+8858228 | Msa0054170:CDS |
| ATTGCAGAGGCCATGATTCG+AGG | 0.563068 | 1_2:+8862568 | Msa0054170:CDS |
| AATCATTTAAAATAATAGGC+AGG | 0.569875 | 1_2:-8862591 | None:intergenic |
| CATTGTGAGAGGATTCCGAT+TGG | 0.571847 | 1_2:+8858201 | Msa0054170:CDS |
| GGAGATTTATTAAATGACGA+GGG | 0.574821 | 1_2:+8861718 | Msa0054170:CDS |
| AGTGAAATGTGTTCATTCAT+CGG | 0.575172 | 1_2:-8857802 | None:intergenic |
| CGAACAGGCTTTATAAAGGA+AGG | 0.575344 | 1_2:-8860699 | None:intergenic |
| CAGAACTAAACTAACCATGT+TGG | 0.579591 | 1_2:-8860491 | None:intergenic |
| TGAGAACCACATTACCTGCC+CGG | 0.584401 | 1_2:-8862620 | None:intergenic |
| ATCACAAGAATCTGACCTGT+GGG | 0.585615 | 1_2:-8861745 | None:intergenic |
| TGATTGGAAGATTCCAGTGA+AGG | 0.586288 | 1_2:+8861810 | Msa0054170:CDS |
| ACTAAACTAACCATGTTGGA+TGG | 0.594783 | 1_2:-8860487 | None:intergenic |
| TTGATGAGTGATACTGGTGG+TGG | 0.596075 | 1_2:+8858375 | Msa0054170:CDS |
| TGGGATTGAAGAGTGGTGAG+GGG | 0.596691 | 1_2:+8858328 | Msa0054170:CDS |
| CCTGCTGTATTATTGATGGG+GGG | 0.598824 | 1_2:+8861652 | Msa0054170:CDS |
| ACCAAAATTGAAGAATGCAT+GGG | 0.604354 | 1_2:+8862425 | Msa0054170:CDS |
| GATGTGGAAGATGAAGGATT+GGG | 0.606638 | 1_2:+8858309 | Msa0054170:CDS |
| TGAGCACATGCCATCCAACA+TGG | 0.607260 | 1_2:+8860477 | Msa0054170:CDS |
| TAAAGGAAGGTCTAACAGGT+AGG | 0.611675 | 1_2:-8860686 | None:intergenic |
| TTATTCGATACTTTCTGTCG+AGG | 0.615767 | 1_2:+8864275 | Msa0054170:CDS |
| GGTCAGATTCTTGTGATCTG+TGG | 0.618567 | 1_2:+8861751 | Msa0054170:CDS |
| AAAATGCATTAAAACTAGCA+AGG | 0.621362 | 1_2:+8863196 | Msa0054170:CDS |
| TGGCCCAGGGACAATTGCAG+AGG | 0.622682 | 1_2:+8862555 | Msa0054170:CDS |
| TCACTCAGTTTAAACAATAG+CGG | 0.624973 | 1_2:+8858123 | Msa0054170:CDS |
| CTTCAACAACCTCACACGTG+TGG | 0.626249 | 1_2:+8858077 | Msa0054170:CDS |
| CTCAGTTTAAACAATAGCGG+TGG | 0.637662 | 1_2:+8858126 | Msa0054170:CDS |
| ACTAAGGAGAGATTTAGGGA+TGG | 0.645174 | 1_2:+8861618 | Msa0054170:CDS |
| TGGAGATTTATTAAATGACG+AGG | 0.645340 | 1_2:+8861717 | Msa0054170:CDS |
| TGGTGAAACATGGACCGTTG+TGG | 0.648644 | 1_2:+8859261 | Msa0054170:CDS |
| TATGGTCTGAGCACACACCT+TGG | 0.651270 | 1_2:+8859204 | Msa0054170:CDS |
| CTTGACCTCAAAATGCGAAG+AGG | 0.652018 | 1_2:-8860410 | None:intergenic |
| GAGATTTATTAAATGACGAG+GGG | 0.652249 | 1_2:+8861719 | Msa0054170:CDS |
| GGAGATAGCGAAAATTGTTG+CGG | 0.653478 | 1_2:+8863131 | Msa0054170:CDS |
| TTGACTGATGAACTAGACGT+GGG | 0.657276 | 1_2:-8859307 | None:intergenic |
| TTTGACTGATGAACTAGACG+TGG | 0.659531 | 1_2:-8859308 | None:intergenic |
| GATCACAAGAATCTGACCTG+TGG | 0.659557 | 1_2:-8861746 | None:intergenic |
| GAGGATGACCTACTATGGAA+CGG | 0.659969 | 1_2:+8859283 | Msa0054170:CDS |
| AGATTTATTAAATGACGAGG+GGG | 0.661667 | 1_2:+8861720 | Msa0054170:CDS |
| ATTGGGATTGAAGAGTGGTG+AGG | 0.665244 | 1_2:+8858326 | Msa0054170:CDS |
| ATGATGATGCCACACGTGTG+AGG | 0.673938 | 1_2:-8858086 | None:intergenic |
| GAAGGATTGGGATTGAAGAG+TGG | 0.674436 | 1_2:+8858321 | Msa0054170:CDS |
| GCTCAAATCTGTAATAACTG+TGG | 0.689167 | 1_2:-8860459 | None:intergenic |
| TGAAACATGGACCGTTGTGG+AGG | 0.709765 | 1_2:+8859264 | Msa0054170:CDS |
| TAGTAGGTCATCCTCCACAA+CGG | 0.715366 | 1_2:-8859275 | None:intergenic |
| TGACTGATGAACTAGACGTG+GGG | 0.741650 | 1_2:-8859306 | None:intergenic |
| TCGCTGGGAGTTGATGACGG+TGG | 0.773048 | 1_2:+8858231 | Msa0054170:CDS |
| TGTTACAAAAGAACCCAATG+CGG | 0.774333 | 1_2:+8857945 | Msa0054170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAAATTAATAATTT+TGG | + | chr1_2:8863446-8863465 | Msa0054170:intron | 0.0% |
| !! | AGTTAATTATTGTAATAAAA+TGG | - | chr1_2:8857892-8857911 | None:intergenic | 10.0% |
| !! | AATTGTTTGATATTTATTAT+GGG | + | chr1_2:8861284-8861303 | Msa0054170:intron | 10.0% |
| !! | TAAATAAATAAATGTTGATA+TGG | + | chr1_2:8862352-8862371 | Msa0054170:intron | 10.0% |
| !!! | ATGTAATCATTTAAAATAAT+AGG | - | chr1_2:8862598-8862617 | None:intergenic | 10.0% |
| !! | GTAATAAAATGGAATATAAA+TGG | - | chr1_2:8857881-8857900 | None:intergenic | 15.0% |
| !!! | ATTTTTAGGTAAAAAAGTTA+GGG | + | chr1_2:8858757-8858776 | Msa0054170:intron | 15.0% |
| !!! | TCTTATTTCTTGTATTTTTT+AGG | + | chr1_2:8860565-8860584 | Msa0054170:intron | 15.0% |
| !! | AACCTCAAATAATAAATAAA+CGG | - | chr1_2:8861014-8861033 | None:intergenic | 15.0% |
| !! | AAGATATTAAGTGTAAAATA+GGG | - | chr1_2:8861180-8861199 | None:intergenic | 15.0% |
| !!! | CTCAAAATTCAAATTTTTAA+TGG | + | chr1_2:8861246-8861265 | Msa0054170:intron | 15.0% |
| !! | CAATTGTTTGATATTTATTA+TGG | + | chr1_2:8861283-8861302 | Msa0054170:intron | 15.0% |
| !!! | TTCACATTTTTAATTATTCT+GGG | - | chr1_2:8862114-8862133 | None:intergenic | 15.0% |
| !!! | TTTCACATTTTTAATTATTC+TGG | - | chr1_2:8862115-8862134 | None:intergenic | 15.0% |
| !! | TTGGTAAAAACAATAATTTA+GGG | - | chr1_2:8862382-8862401 | None:intergenic | 15.0% |
| !! | ATTGGTAAAAACAATAATTT+AGG | - | chr1_2:8862383-8862402 | None:intergenic | 15.0% |
| !! | AAATAAAAAAATTCATGACA+AGG | - | chr1_2:8862663-8862682 | None:intergenic | 15.0% |
| !! | ATTAGATACTAGTTAAATTT+AGG | + | chr1_2:8862944-8862963 | Msa0054170:intron | 15.0% |
| !! | ACTAAACATTATAATCAAAT+TGG | - | chr1_2:8863408-8863427 | None:intergenic | 15.0% |
| !!! | TTTGTTAATTTTGTGTAATG+AGG | - | chr1_2:8857850-8857869 | None:intergenic | 20.0% |
| !!! | GATTTTTAGGTAAAAAAGTT+AGG | + | chr1_2:8858756-8858775 | Msa0054170:intron | 20.0% |
| !!! | GTTGTTTTTGTAAGTTATTT+TGG | + | chr1_2:8858854-8858873 | Msa0054170:intron | 20.0% |
| !! | TAGTAGAATGAGATTAAAAT+AGG | + | chr1_2:8858883-8858902 | Msa0054170:intron | 20.0% |
| !! | TTTGACGATTAATTTATGTA+CGG | + | chr1_2:8859007-8859026 | Msa0054170:intron | 20.0% |
| !! | TAACTAACAACTTAAAAACA+GGG | - | chr1_2:8859524-8859543 | None:intergenic | 20.0% |
| !! | TTGAAAATAACTTTATACGT+AGG | + | chr1_2:8860073-8860092 | Msa0054170:intron | 20.0% |
| !! | TGTATAAAACAATTCAGAAA+AGG | - | chr1_2:8860806-8860825 | None:intergenic | 20.0% |
| !!! | AATTGTTTTATACAATGAGA+TGG | + | chr1_2:8860812-8860831 | Msa0054170:intron | 20.0% |
| !!! | ATTGTTTTATACAATGAGAT+GGG | + | chr1_2:8860813-8860832 | Msa0054170:intron | 20.0% |
| !! | TTGTTAAATATGATTGTTCA+TGG | + | chr1_2:8861135-8861154 | Msa0054170:intron | 20.0% |
| !! | GAAGATATTAAGTGTAAAAT+AGG | - | chr1_2:8861181-8861200 | None:intergenic | 20.0% |
| !! | TATTTCATGTTTATGCAATT+TGG | + | chr1_2:8861542-8861561 | Msa0054170:intron | 20.0% |
| !!! | TTACTTCAATACTCTTATTT+AGG | - | chr1_2:8862068-8862087 | None:intergenic | 20.0% |
| !!! | AAGAGTATTGAAGTAAAAAA+TGG | + | chr1_2:8862072-8862091 | Msa0054170:intron | 20.0% |
| !! | TGGTAAAAACAATAATTTAG+GGG | - | chr1_2:8862381-8862400 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTACCAATGTTTT+AGG | + | chr1_2:8862388-8862407 | Msa0054170:intron | 20.0% |
| !!! | AATCATTTAAAATAATAGGC+AGG | - | chr1_2:8862594-8862613 | None:intergenic | 20.0% |
| !!! | ATTTTAAATGATTACATTGC+CGG | + | chr1_2:8862601-8862620 | Msa0054170:CDS | 20.0% |
| !! | AACATTATAATCAAATTGGT+GGG | - | chr1_2:8863404-8863423 | None:intergenic | 20.0% |
| !! | AAACATTATAATCAAATTGG+TGG | - | chr1_2:8863405-8863424 | None:intergenic | 20.0% |
| !! | AAAAATCATTCTTCTATTGA+AGG | + | chr1_2:8864075-8864094 | Msa0054170:intron | 20.0% |
| ! | ATTGTTTAAACTGAGTGAAA+CGG | - | chr1_2:8858121-8858140 | None:intergenic | 25.0% |
| !!! | ATGATTTTAATAGAGCTGTT+AGG | + | chr1_2:8858175-8858194 | Msa0054170:CDS | 25.0% |
| !!! | TGATTTTAATAGAGCTGTTA+GGG | + | chr1_2:8858176-8858195 | Msa0054170:CDS | 25.0% |
| ! | AAGAAAATGACAGAATTGAA+TGG | + | chr1_2:8858561-8858580 | Msa0054170:intron | 25.0% |
| ! | GTAATTAGAGGAATGAAATA+TGG | + | chr1_2:8858711-8858730 | Msa0054170:intron | 25.0% |
| !!! | ATTTTGTTTGTTGAGTAATG+TGG | + | chr1_2:8858805-8858824 | Msa0054170:intron | 25.0% |
| !! | TGATTATGTAAAATCGATTC+TGG | + | chr1_2:8858939-8858958 | Msa0054170:intron | 25.0% |
| !! | ATGAATAATTTGCAAGTGAA+TGG | + | chr1_2:8859040-8859059 | Msa0054170:intron | 25.0% |
| !!! | AATGGTAATTTTAGGATTGA+GGG | + | chr1_2:8859058-8859077 | Msa0054170:intron | 25.0% |
| !!! | CTTTTAGGAATTTGATTGAA+CGG | - | chr1_2:8859230-8859249 | None:intergenic | 25.0% |
| !!! | TCCTAAAAGCTATAGTTTTT+TGG | + | chr1_2:8859241-8859260 | Msa0054170:CDS | 25.0% |
| !! | ACCAAAAAACTATAGCTTTT+AGG | - | chr1_2:8859245-8859264 | None:intergenic | 25.0% |
| !!! | TATAGTTTTTTGGTGAAACA+TGG | + | chr1_2:8859251-8859270 | Msa0054170:CDS | 25.0% |
| ! | GTAACTAACAACTTAAAAAC+AGG | - | chr1_2:8859525-8859544 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGTTAGTTACCAT+AGG | + | chr1_2:8859528-8859547 | Msa0054170:intron | 25.0% |
| ! | ATATTGTTTGAATGATCCTA+TGG | - | chr1_2:8859547-8859566 | None:intergenic | 25.0% |
| !! | ATGTGCAATATACAGATTTT+CGG | + | chr1_2:8859673-8859692 | Msa0054170:intron | 25.0% |
| !! | AGATATTTTTCATCCAATGT+GGG | - | chr1_2:8860054-8860073 | None:intergenic | 25.0% |
| !! | AAGATATTTTTCATCCAATG+TGG | - | chr1_2:8860055-8860074 | None:intergenic | 25.0% |
| ! | AATAACATTCTCTTAGAATC+TGG | - | chr1_2:8860150-8860169 | None:intergenic | 25.0% |
| !!! | TCTTGTATATTTTTACAGTG+AGG | + | chr1_2:8860319-8860338 | Msa0054170:intron | 25.0% |
| !! | TCAGACTATAGGTAATATTT+TGG | - | chr1_2:8860537-8860556 | None:intergenic | 25.0% |
| ! | CAAACCCAAATAAAGATTTA+TGG | + | chr1_2:8860663-8860682 | Msa0054170:CDS | 25.0% |
| !! | TAGGCCATAAATCTTTATTT+GGG | - | chr1_2:8860670-8860689 | None:intergenic | 25.0% |
| !! | GTTTAGTAATTCAACTTGTT+AGG | + | chr1_2:8860866-8860885 | Msa0054170:intron | 25.0% |
| ! | ATAAATAAACGGCAAAATCA+TGG | - | chr1_2:8861003-8861022 | None:intergenic | 25.0% |
| !! | TGCCGTTTATTTATTATTTG+AGG | + | chr1_2:8861009-8861028 | Msa0054170:intron | 25.0% |
| ! | TTAAATATGATTGTTCATGG+TGG | + | chr1_2:8861138-8861157 | Msa0054170:intron | 25.0% |
| ! | CTAAAATTATAATAGTCCGT+TGG | - | chr1_2:8861333-8861352 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTAGTGTACATGA+TGG | + | chr1_2:8861347-8861366 | Msa0054170:intron | 25.0% |
| ! | TATTGATACACTAATTGTTC+CGG | + | chr1_2:8861833-8861852 | Msa0054170:intron | 25.0% |
| ! | AGCAAAAAAAATGTTACTCA+TGG | + | chr1_2:8861985-8862004 | Msa0054170:intron | 25.0% |
| !! | TTCAATACTCTTATTTAGGA+CGG | - | chr1_2:8862064-8862083 | None:intergenic | 25.0% |
| ! | TTATAGTTATAATTGCTGAG+CGG | + | chr1_2:8862142-8862161 | Msa0054170:intron | 25.0% |
| ! | TTAGATATTCATTGTACAAG+AGG | - | chr1_2:8862233-8862252 | None:intergenic | 25.0% |
| !! | ACAGAAAGTTTTCTTTCTTA+TGG | + | chr1_2:8862306-8862325 | Msa0054170:intron | 25.0% |
| !! | CAGAAAGTTTTCTTTCTTAT+GGG | + | chr1_2:8862307-8862326 | Msa0054170:intron | 25.0% |
| !!! | TTCTTTTTTGTTGCTTTTGT+AGG | + | chr1_2:8862531-8862550 | Msa0054170:intron | 25.0% |
| !! | TTTTAAATGATTACATTGCC+GGG | + | chr1_2:8862602-8862621 | Msa0054170:CDS | 25.0% |
| !!! | TGCTAGTTTTAATGCATTTT+GGG | - | chr1_2:8863196-8863215 | None:intergenic | 25.0% |
| !!! | TTGCTAGTTTTAATGCATTT+TGG | - | chr1_2:8863197-8863216 | None:intergenic | 25.0% |
| ! | AAAATGCATTAAAACTAGCA+AGG | + | chr1_2:8863196-8863215 | Msa0054170:CDS | 25.0% |
| !! | TGTTTTGTGAAAAATGTGAA+AGG | + | chr1_2:8863335-8863354 | Msa0054170:intron | 25.0% |
| !!! | CATAGGACTAGTTTTTTTTA+GGG | - | chr1_2:8863642-8863661 | None:intergenic | 25.0% |
| !!! | GAAAGTATTAAAGTTGAAAG+CGG | + | chr1_2:8863728-8863747 | Msa0054170:intron | 25.0% |
| !!! | GGTTTTTAAGTAAGTGGATT+GGG | - | chr1_2:8857666-8857685 | None:intergenic | 30.0% |
| TGTTTGTTTGTTTATTGCAG+AGG | - | chr1_2:8857754-8857773 | None:intergenic | 30.0% | |
| AGTGAAATGTGTTCATTCAT+CGG | - | chr1_2:8857805-8857824 | None:intergenic | 30.0% | |
| TTTGAATTAGGTTCACGAAT+TGG | + | chr1_2:8857970-8857989 | Msa0054170:CDS | 30.0% | |
| TAATTAGAAAGAAGTGAAGC+TGG | - | chr1_2:8858051-8858070 | None:intergenic | 30.0% | |
| TCACTCAGTTTAAACAATAG+CGG | + | chr1_2:8858123-8858142 | Msa0054170:CDS | 30.0% | |
| !! | TTGATTTTGATGAGTGATAC+TGG | + | chr1_2:8858369-8858388 | Msa0054170:CDS | 30.0% |
| !!! | GCTGCTTTTTATCAAGAATA+TGG | + | chr1_2:8858426-8858445 | Msa0054170:CDS | 30.0% |
| ! | TTAAGAGCAAGGAGATTTTT+AGG | + | chr1_2:8858743-8858762 | Msa0054170:intron | 30.0% |
| TTTAGGTAAAAAAGTTAGGG+TGG | + | chr1_2:8858760-8858779 | Msa0054170:intron | 30.0% | |
| TTAGGTAAAAAAGTTAGGGT+GGG | + | chr1_2:8858761-8858780 | Msa0054170:intron | 30.0% | |
| ! | AAATCGATTCTGGTTAAAAG+TGG | + | chr1_2:8858949-8858968 | Msa0054170:intron | 30.0% |
| ! | AATCGATTCTGGTTAAAAGT+GGG | + | chr1_2:8858950-8858969 | Msa0054170:intron | 30.0% |
| !!! | CTAACTTGGAACTAGTTTTT+TGG | + | chr1_2:8858975-8858994 | Msa0054170:intron | 30.0% |
| ! | TGCAAGTGAATGGTAATTTT+AGG | + | chr1_2:8859050-8859069 | Msa0054170:intron | 30.0% |
| !!! | GAATGGTAATTTTAGGATTG+AGG | + | chr1_2:8859057-8859076 | Msa0054170:intron | 30.0% |
| !!! | GTTGTGTTTTGTTTACACTT+TGG | + | chr1_2:8859149-8859168 | Msa0054170:intron | 30.0% |
| !! | AGGTGTTTATTACCGATTTA+TGG | + | chr1_2:8859186-8859205 | Msa0054170:intron | 30.0% |
| TGAAGTTATTTGACAAGAAC+TGG | - | chr1_2:8859393-8859412 | None:intergenic | 30.0% | |
| TGAATTAGTATATGCCGTAA+TGG | + | chr1_2:8859432-8859451 | Msa0054170:intron | 30.0% | |
| CACTTATCAGTTATCCATTA+CGG | - | chr1_2:8859449-8859468 | None:intergenic | 30.0% | |
| ATAAATGCATGTATGATGTG+TGG | - | chr1_2:8859649-8859668 | None:intergenic | 30.0% | |
| TTACAATAAAAATGACCGCA+CGG | + | chr1_2:8859732-8859751 | Msa0054170:intron | 30.0% | |
| TCCACATATAAAGATGTTTG+CGG | - | chr1_2:8859894-8859913 | None:intergenic | 30.0% | |
| CAAACATCTTTATATGTGGA+AGG | + | chr1_2:8859894-8859913 | Msa0054170:intron | 30.0% | |
| TGATACAATCTTAGAACTTG+AGG | - | chr1_2:8859929-8859948 | None:intergenic | 30.0% | |
| ! | CAGTAGTTATTGTAATTTGC+TGG | + | chr1_2:8860201-8860220 | Msa0054170:intron | 30.0% |
| GATGCATATATTGTTTGTTC+TGG | + | chr1_2:8860228-8860247 | Msa0054170:intron | 30.0% | |
| ! | TGCACACTGATTATTATATC+AGG | - | chr1_2:8860371-8860390 | None:intergenic | 30.0% |
| AGATGTCAAAATCAGACTAT+AGG | - | chr1_2:8860548-8860567 | None:intergenic | 30.0% | |
| GTAGGCCATAAATCTTTATT+TGG | - | chr1_2:8860671-8860690 | None:intergenic | 30.0% | |
| TTTATAAAGGAAGGTCTAAC+AGG | - | chr1_2:8860693-8860712 | None:intergenic | 30.0% | |
| TTCTTGACTTCTTATAGCTA+TGG | + | chr1_2:8860739-8860758 | Msa0054170:intron | 30.0% | |
| CAATTCAGAAAAGGTCATTT+GGG | - | chr1_2:8860797-8860816 | None:intergenic | 30.0% | |
| ACAATTCAGAAAAGGTCATT+TGG | - | chr1_2:8860798-8860817 | None:intergenic | 30.0% | |
| ATACAATGAGATGGGATAAT+AGG | + | chr1_2:8860821-8860840 | Msa0054170:intron | 30.0% | |
| CATTTATGACAACAATGAGA+CGG | + | chr1_2:8860918-8860937 | Msa0054170:intron | 30.0% | |
| ATTTATGACAACAATGAGAC+GGG | + | chr1_2:8860919-8860938 | Msa0054170:intron | 30.0% | |
| ! | GGTTCTGATTCTTTAACTAA+AGG | + | chr1_2:8861305-8861324 | Msa0054170:intron | 30.0% |
| CTATTAACCATGTGTTTGAT+TGG | + | chr1_2:8861483-8861502 | Msa0054170:intron | 30.0% | |
| TTCTCTAATAGGATGAACTA+AGG | + | chr1_2:8861602-8861621 | Msa0054170:intron | 30.0% | |
| ATGAACTAAGGAGAGATTTA+GGG | + | chr1_2:8861614-8861633 | Msa0054170:CDS | 30.0% | |
| TGGAGATTTATTAAATGACG+AGG | + | chr1_2:8861717-8861736 | Msa0054170:CDS | 30.0% | |
| GGAGATTTATTAAATGACGA+GGG | + | chr1_2:8861718-8861737 | Msa0054170:CDS | 30.0% | |
| GAGATTTATTAAATGACGAG+GGG | + | chr1_2:8861719-8861738 | Msa0054170:CDS | 30.0% | |
| AGATTTATTAAATGACGAGG+GGG | + | chr1_2:8861720-8861739 | Msa0054170:CDS | 30.0% | |
| ACAAACTCAGTTCTATTGAT+TGG | + | chr1_2:8861794-8861813 | Msa0054170:CDS | 30.0% | |
| ! | AATCTAGAACATGCATATAC+TGG | - | chr1_2:8861879-8861898 | None:intergenic | 30.0% |
| !! | TTTACCAATGTTTTAGGTCA+TGG | + | chr1_2:8862394-8862413 | Msa0054170:intron | 30.0% |
| !! | TTACCAATGTTTTAGGTCAT+GGG | + | chr1_2:8862395-8862414 | Msa0054170:intron | 30.0% |
| TACCAAAATTGAAGAATGCA+TGG | + | chr1_2:8862424-8862443 | Msa0054170:CDS | 30.0% | |
| ACCAAAATTGAAGAATGCAT+GGG | + | chr1_2:8862425-8862444 | Msa0054170:CDS | 30.0% | |
| CTTTGTAATAATGCAATCAC+AGG | - | chr1_2:8862453-8862472 | None:intergenic | 30.0% | |
| CTGTGATTGCATTATTACAA+AGG | + | chr1_2:8862451-8862470 | Msa0054170:CDS | 30.0% | |
| GATTGCATTATTACAAAGGT+TGG | + | chr1_2:8862455-8862474 | Msa0054170:intron | 30.0% | |
| TTGTGAAATAGTGTCTATAG+CGG | - | chr1_2:8862804-8862823 | None:intergenic | 30.0% | |
| ! | TAACCAGTGTTGTTAAATAG+TGG | - | chr1_2:8862899-8862918 | None:intergenic | 30.0% |
| ! | AACACTGGTTAAATTTAGAG+TGG | + | chr1_2:8862908-8862927 | Msa0054170:intron | 30.0% |
| TACTAGTTAAATTTAGGCTG+AGG | + | chr1_2:8862950-8862969 | Msa0054170:intron | 30.0% | |
| ACAACCATATTCAATCACTT+GGG | - | chr1_2:8863021-8863040 | None:intergenic | 30.0% | |
| ! | ACATCATTTCCTTTGATTTC+AGG | + | chr1_2:8863047-8863066 | Msa0054170:intron | 30.0% |
| ! | CAACCATTTTCAACAACATA+GGG | - | chr1_2:8863087-8863106 | None:intergenic | 30.0% |
| ! | ACAACCATTTTCAACAACAT+AGG | - | chr1_2:8863088-8863107 | None:intergenic | 30.0% |
| TATGTTGTTGAAAATGGTTG+TGG | + | chr1_2:8863087-8863106 | Msa0054170:CDS | 30.0% | |
| ! | AAAGTACTCTAAATTGCCTA+AGG | + | chr1_2:8863110-8863129 | Msa0054170:CDS | 30.0% |
| ! | ACAATTTTGAACACAGAATC+CGG | - | chr1_2:8863222-8863241 | None:intergenic | 30.0% |
| GTGTATCACTAGTAAAAATG+AGG | + | chr1_2:8863369-8863388 | Msa0054170:intron | 30.0% | |
| ACATGAACTTAAAAAGCCAA+GGG | - | chr1_2:8863498-8863517 | None:intergenic | 30.0% | |
| AACATGAACTTAAAAAGCCA+AGG | - | chr1_2:8863499-8863518 | None:intergenic | 30.0% | |
| !!! | GCATAGGACTAGTTTTTTTT+AGG | - | chr1_2:8863643-8863662 | None:intergenic | 30.0% |
| CCAAGAAAATGAAATTGCAT+AGG | - | chr1_2:8863659-8863678 | None:intergenic | 30.0% | |
| ! | CCTATGCAATTTCATTTTCT+TGG | + | chr1_2:8863656-8863675 | Msa0054170:intron | 30.0% |
| !! | AATTTAGAAGTGTTGAGCTA+TGG | + | chr1_2:8863688-8863707 | Msa0054170:intron | 30.0% |
| !!! | CACTTCTGCTTTTAATTTGT+TGG | - | chr1_2:8863794-8863813 | None:intergenic | 30.0% |
| CAACAAATTAAAAGCAGAAG+TGG | + | chr1_2:8863792-8863811 | Msa0054170:intron | 30.0% | |
| CTCTCAAATAATCCATACAT+TGG | - | chr1_2:8863831-8863850 | None:intergenic | 30.0% | |
| TTCCATCCAGAAATTTAACT+CGG | - | chr1_2:8863857-8863876 | None:intergenic | 30.0% | |
| !!! | TTCTTTTTTGGAGGATAATC+AGG | - | chr1_2:8864038-8864057 | None:intergenic | 30.0% |
| GATTTCAAACAGTGAAATAC+TGG | - | chr1_2:8864119-8864138 | None:intergenic | 30.0% | |
| TAGTCAACTATAAACCTGTA+AGG | + | chr1_2:8864152-8864171 | Msa0054170:intron | 30.0% | |
| ! | CATCTTGTGCATAAAGTTTT+TGG | + | chr1_2:8864243-8864262 | Msa0054170:CDS | 30.0% |
| !! | ATCATTTTTGCAGGATAATC+AGG | - | chr1_2:8864306-8864325 | None:intergenic | 30.0% |
| !!! | AGTAAGTGGATTGGGTTTTT+TGG | - | chr1_2:8857658-8857677 | None:intergenic | 35.0% |
| !!! | GGGTTTTTAAGTAAGTGGAT+TGG | - | chr1_2:8857667-8857686 | None:intergenic | 35.0% |
| !!! | GAGTTGGGTTTTTAAGTAAG+TGG | - | chr1_2:8857672-8857691 | None:intergenic | 35.0% |
| TTCATTCATCGGAGAAAATG+AGG | - | chr1_2:8857794-8857813 | None:intergenic | 35.0% | |
| TAATGAGGTTGAAGAGGTTA+AGG | - | chr1_2:8857835-8857854 | None:intergenic | 35.0% | |
| TTTGTGTAATGAGGTTGAAG+AGG | - | chr1_2:8857841-8857860 | None:intergenic | 35.0% | |
| TGTTACAAAAGAACCCAATG+CGG | + | chr1_2:8857945-8857964 | Msa0054170:CDS | 35.0% | |
| CCTAATTCAAAAACCGCATT+GGG | - | chr1_2:8857961-8857980 | None:intergenic | 35.0% | |
| ACCTAATTCAAAAACCGCAT+TGG | - | chr1_2:8857962-8857981 | None:intergenic | 35.0% | |
| !! | ATTTTGATGAGTGATACTGG+TGG | + | chr1_2:8858372-8858391 | Msa0054170:CDS | 35.0% |
| AGAATATGGCGATGATTATC+AGG | + | chr1_2:8858440-8858459 | Msa0054170:CDS | 35.0% | |
| TGTCTGTGTTAGGTAATTAG+AGG | + | chr1_2:8858699-8858718 | Msa0054170:intron | 35.0% | |
| TAGGTAAAAAAGTTAGGGTG+GGG | + | chr1_2:8858762-8858781 | Msa0054170:intron | 35.0% | |
| ! | ATCGATTCTGGTTAAAAGTG+GGG | + | chr1_2:8858951-8858970 | Msa0054170:intron | 35.0% |
| !!! | AATTTTAGGATTGAGGGTCA+TGG | + | chr1_2:8859064-8859083 | Msa0054170:intron | 35.0% |
| CAACTTCAACATTCATAGCT+CGG | + | chr1_2:8859339-8859358 | Msa0054170:CDS | 35.0% | |
| TGACTCATACATGAAAGTCA+GGG | + | chr1_2:8859480-8859499 | Msa0054170:intron | 35.0% | |
| GTTTCATTGTCGTTATGAAC+TGG | + | chr1_2:8859586-8859605 | Msa0054170:intron | 35.0% | |
| TATGAACTGGATTTCTCTAG+TGG | + | chr1_2:8859599-8859618 | Msa0054170:intron | 35.0% | |
| AACTTGGCAATATTTCAGCA+CGG | + | chr1_2:8859756-8859775 | Msa0054170:intron | 35.0% | |
| CTGTCATGCACTTTATTGTT+AGG | - | chr1_2:8859806-8859825 | None:intergenic | 35.0% | |
| CCACATATAAAGATGTTTGC+GGG | - | chr1_2:8859893-8859912 | None:intergenic | 35.0% | |
| ATTGTATCAGAGCCTATTCA+AGG | + | chr1_2:8859940-8859959 | Msa0054170:intron | 35.0% | |
| TAGATTTGACAAATGGAGCA+TGG | - | chr1_2:8860005-8860024 | None:intergenic | 35.0% | |
| CACACTCTAGATTTGACAAA+TGG | - | chr1_2:8860012-8860031 | None:intergenic | 35.0% | |
| ! | TTGTCAAATCTAGAGTGTGA+AGG | + | chr1_2:8860013-8860032 | Msa0054170:intron | 35.0% |
| ! | TGTCAAATCTAGAGTGTGAA+GGG | + | chr1_2:8860014-8860033 | Msa0054170:intron | 35.0% |
| CTAACTCAACCTTACAAAAC+CGG | - | chr1_2:8860120-8860139 | None:intergenic | 35.0% | |
| AGTATAATATCACGTGTCAG+AGG | + | chr1_2:8860287-8860306 | Msa0054170:intron | 35.0% | |
| ! | TTTTACAGTGAGGTTGCTAA+AGG | + | chr1_2:8860329-8860348 | Msa0054170:intron | 35.0% |
| GCTCAAATCTGTAATAACTG+TGG | - | chr1_2:8860462-8860481 | None:intergenic | 35.0% | |
| ACTAAACTAACCATGTTGGA+TGG | - | chr1_2:8860490-8860509 | None:intergenic | 35.0% | |
| CAGAACTAAACTAACCATGT+TGG | - | chr1_2:8860494-8860513 | None:intergenic | 35.0% | |
| !! | CAACATGGTTAGTTTAGTTC+TGG | + | chr1_2:8860492-8860511 | Msa0054170:intron | 35.0% |
| AACTACAGATGTTGCCAAAA+GGG | + | chr1_2:8860620-8860639 | Msa0054170:CDS | 35.0% | |
| CTTCCTTTATAAAGCCTGTT+CGG | + | chr1_2:8860700-8860719 | Msa0054170:CDS | 35.0% | |
| GCTATAAGAAGTCAAGAACA+TGG | - | chr1_2:8860737-8860756 | None:intergenic | 35.0% | |
| TCTTATAGCTATGGCATGAT+TGG | + | chr1_2:8860748-8860767 | Msa0054170:intron | 35.0% | |
| CGTCTCATTGTTGTCATAAA+TGG | - | chr1_2:8860920-8860939 | None:intergenic | 35.0% | |
| !! | AGCCATTTTCTTTCTTGCTA+AGG | + | chr1_2:8860947-8860966 | Msa0054170:intron | 35.0% |
| !! | GCCATTTTCTTTCTTGCTAA+GGG | + | chr1_2:8860948-8860967 | Msa0054170:intron | 35.0% |
| ACCCTTAGCAAGAAAGAAAA+TGG | - | chr1_2:8860952-8860971 | None:intergenic | 35.0% | |
| ! | TTTTCTTTCTTGCTAAGGGT+AGG | + | chr1_2:8860952-8860971 | Msa0054170:intron | 35.0% |
| ! | TGTATTGTCGACTACAATCT+TGG | + | chr1_2:8860977-8860996 | Msa0054170:intron | 35.0% |
| GCTCAGATTAACAATAGATG+TGG | - | chr1_2:8861073-8861092 | None:intergenic | 35.0% | |
| CATCTATTGTTAATCTGAGC+TGG | + | chr1_2:8861073-8861092 | Msa0054170:intron | 35.0% | |
| ! | ATATGATTGTTCATGGTGGA+TGG | + | chr1_2:8861142-8861161 | Msa0054170:intron | 35.0% |
| TATCTTCCGTAGTTAGCATA+TGG | + | chr1_2:8861194-8861213 | Msa0054170:intron | 35.0% | |
| ACTTCTCCATATGCTAACTA+CGG | - | chr1_2:8861203-8861222 | None:intergenic | 35.0% | |
| TCTTTAACTAAAGGCTCCAA+CGG | + | chr1_2:8861314-8861333 | Msa0054170:intron | 35.0% | |
| TGTTTGATTGGTATCTGCTT+TGG | + | chr1_2:8861495-8861514 | Msa0054170:intron | 35.0% | |
| GATGAACTAAGGAGAGATTT+AGG | + | chr1_2:8861613-8861632 | Msa0054170:CDS | 35.0% | |
| CTTCCTGCTGTATTATTGAT+GGG | + | chr1_2:8861649-8861668 | Msa0054170:CDS | 35.0% | |
| TTCCTGCTGTATTATTGATG+GGG | + | chr1_2:8861650-8861669 | Msa0054170:CDS | 35.0% | |
| TAGTGTATCAATACCTTCAC+TGG | - | chr1_2:8861826-8861845 | None:intergenic | 35.0% | |
| ! | ATAGACTGTTGTCTAGTCTT+AGG | + | chr1_2:8861910-8861929 | Msa0054170:intron | 35.0% |
| ! | ATACTCTTATTTAGGACGGT+GGG | - | chr1_2:8862060-8862079 | None:intergenic | 35.0% |
| ! | AATACTCTTATTTAGGACGG+TGG | - | chr1_2:8862061-8862080 | None:intergenic | 35.0% |
| AAAAAATGGAGTAGACGAGT+AGG | + | chr1_2:8862086-8862105 | Msa0054170:intron | 35.0% | |
| ! | GTTTTCTTTCTTATGGGTCA+AGG | + | chr1_2:8862313-8862332 | Msa0054170:intron | 35.0% |
| AATCCCATGACCTAAAACAT+TGG | - | chr1_2:8862401-8862420 | None:intergenic | 35.0% | |
| ! | TCCCATGCATTCTTCAATTT+TGG | - | chr1_2:8862429-8862448 | None:intergenic | 35.0% |
| CATCAACAACTGTCATAATG+AGG | - | chr1_2:8862509-8862528 | None:intergenic | 35.0% | |
| CTCATTATGACAGTTGTTGA+TGG | + | chr1_2:8862507-8862526 | Msa0054170:intron | 35.0% | |
| !!! | TTTTTGTTGCTTTTGTAGGC+TGG | + | chr1_2:8862535-8862554 | Msa0054170:intron | 35.0% |
| AAAAATTCATGACAAGGTCG+AGG | - | chr1_2:8862657-8862676 | None:intergenic | 35.0% | |
| !! | AAAGTTAGCTTGCACTATTG+TGG | + | chr1_2:8862687-8862706 | Msa0054170:intron | 35.0% |
| AATTTCAGAGTTGCAAGTTG+TGG | + | chr1_2:8862725-8862744 | Msa0054170:intron | 35.0% | |
| ACTATAGCACTGTTATGCAA+CGG | - | chr1_2:8862780-8862799 | None:intergenic | 35.0% | |
| ! | GTGTTGTTAAATAGTGGCTA+TGG | - | chr1_2:8862893-8862912 | None:intergenic | 35.0% |
| TAGCCACTATTTAACAACAC+TGG | + | chr1_2:8862893-8862912 | Msa0054170:intron | 35.0% | |
| CACAACCATATTCAATCACT+TGG | - | chr1_2:8863022-8863041 | None:intergenic | 35.0% | |
| ! | TTTCCTTTGATTTCAGGAAG+CGG | + | chr1_2:8863053-8863072 | Msa0054170:intron | 35.0% |
| GTTCCCTATGTTGTTGAAAA+TGG | + | chr1_2:8863081-8863100 | Msa0054170:CDS | 35.0% | |
| ! | ACAATTTTCGCTATCTCCTT+AGG | - | chr1_2:8863129-8863148 | None:intergenic | 35.0% |
| !!! | GGACATTGCTTTTAGTTCAT+CGG | - | chr1_2:8863175-8863194 | None:intergenic | 35.0% |
| AAAAATGTGAAAGGCAGCAA+AGG | + | chr1_2:8863344-8863363 | Msa0054170:intron | 35.0% | |
| TAATGAGCTTTGCCAATGTA+TGG | + | chr1_2:8863816-8863835 | Msa0054170:intron | 35.0% | |
| GAGAATCCGAGTTAAATTTC+TGG | + | chr1_2:8863848-8863867 | Msa0054170:intron | 35.0% | |
| ! | ATCCGAGTTAAATTTCTGGA+TGG | + | chr1_2:8863852-8863871 | Msa0054170:intron | 35.0% |
| TAATTCAGAGTTCAGACTTG+AGG | - | chr1_2:8863904-8863923 | None:intergenic | 35.0% | |
| ! | ACAATTATAAGTGCTTGCTG+TGG | + | chr1_2:8864004-8864023 | Msa0054170:intron | 35.0% |
| !! | CAATTATAAGTGCTTGCTGT+GGG | + | chr1_2:8864005-8864024 | Msa0054170:intron | 35.0% |
| !! | AATTATAAGTGCTTGCTGTG+GGG | + | chr1_2:8864006-8864025 | Msa0054170:intron | 35.0% |
| !!! | GTTGCATCAAGCTTCTTTTT+TGG | - | chr1_2:8864050-8864069 | None:intergenic | 35.0% |
| ! | TTCACTGTTTGAAATCTGCA+AGG | + | chr1_2:8864123-8864142 | Msa0054170:intron | 35.0% |
| ACTATAAACCTGTAAGGATG+AGG | + | chr1_2:8864158-8864177 | Msa0054170:intron | 35.0% | |
| ATACAAAACCTCATCCTTAC+AGG | - | chr1_2:8864169-8864188 | None:intergenic | 35.0% | |
| !!! | CATAAAGTTTTTGGTGAAGC+TGG | + | chr1_2:8864252-8864271 | Msa0054170:CDS | 35.0% |
| TTATTCGATACTTTCTGTCG+AGG | + | chr1_2:8864275-8864294 | Msa0054170:CDS | 35.0% | |
| !! | GAGTTGAGTTGAGTTGAGTT+GGG | - | chr1_2:8857687-8857706 | None:intergenic | 40.0% |
| !! | TGAGTTGAGTTGAGTTGAGT+TGG | - | chr1_2:8857688-8857707 | None:intergenic | 40.0% |
| ! | GGTTGAAGAGGTTAAGGTTT+TGG | - | chr1_2:8857829-8857848 | None:intergenic | 40.0% |
| ! | CCCAATGCGGTTTTTGAATT+AGG | + | chr1_2:8857958-8857977 | Msa0054170:CDS | 40.0% |
| !! | GTGAACATGCTTCTGAAGTT+AGG | - | chr1_2:8858029-8858048 | None:intergenic | 40.0% |
| GTGTGAGGTTGTTGAAGTAA+AGG | - | chr1_2:8858074-8858093 | None:intergenic | 40.0% | |
| CTCAGTTTAAACAATAGCGG+TGG | + | chr1_2:8858126-8858145 | Msa0054170:CDS | 40.0% | |
| AGTTTAAACAATAGCGGTGG+TGG | + | chr1_2:8858129-8858148 | Msa0054170:CDS | 40.0% | |
| TGATGTGGAAGATGAAGGAT+TGG | + | chr1_2:8858308-8858327 | Msa0054170:CDS | 40.0% | |
| GATGTGGAAGATGAAGGATT+GGG | + | chr1_2:8858309-8858328 | Msa0054170:CDS | 40.0% | |
| !! | TGATCAGAAGTGTCTGTGTT+AGG | + | chr1_2:8858689-8858708 | Msa0054170:intron | 40.0% |
| !! | GGTGCTTTTGTTTAAGAGCA+AGG | + | chr1_2:8858732-8858751 | Msa0054170:intron | 40.0% |
| ! | TCGATTCTGGTTAAAAGTGG+GGG | + | chr1_2:8858952-8858971 | Msa0054170:intron | 40.0% |
| GTCATGGAATGTTACTGTGA+AGG | + | chr1_2:8859080-8859099 | Msa0054170:intron | 40.0% | |
| !! | CTTTGGAGTTAATGCTATGC+AGG | + | chr1_2:8859166-8859185 | Msa0054170:intron | 40.0% |
| TGTGTGCTCAGACCATAAAT+CGG | - | chr1_2:8859201-8859220 | None:intergenic | 40.0% | |
| TTGACTGATGAACTAGACGT+GGG | - | chr1_2:8859310-8859329 | None:intergenic | 40.0% | |
| TTTGACTGATGAACTAGACG+TGG | - | chr1_2:8859311-8859330 | None:intergenic | 40.0% | |
| !! | TTCATAGCTCGGTGAGATTT+TGG | + | chr1_2:8859350-8859369 | Msa0054170:intron | 40.0% |
| GTGACTCATACATGAAAGTC+AGG | + | chr1_2:8859479-8859498 | Msa0054170:intron | 40.0% | |
| ! | ATGAAAGTCAGGGCATTAAC+TGG | + | chr1_2:8859490-8859509 | Msa0054170:intron | 40.0% |
| AATATTGCCAAGTTACCGTG+CGG | - | chr1_2:8859750-8859769 | None:intergenic | 40.0% | |
| ! | CACGGTTCGGATTTGATATT+TGG | + | chr1_2:8859774-8859793 | Msa0054170:intron | 40.0% |
| TGCAACTGCAGGTAATAAGA+GGG | - | chr1_2:8859842-8859861 | None:intergenic | 40.0% | |
| TTGCAACTGCAGGTAATAAG+AGG | - | chr1_2:8859843-8859862 | None:intergenic | 40.0% | |
| CTTCCACATTGGATGAGATT+AGG | + | chr1_2:8859867-8859886 | Msa0054170:intron | 40.0% | |
| CCCGCAAACATCTTTATATG+TGG | + | chr1_2:8859890-8859909 | Msa0054170:intron | 40.0% | |
| ATCTTAGAACTTGAGGCAAG+AGG | - | chr1_2:8859922-8859941 | None:intergenic | 40.0% | |
| AGAGCCTATTCAAGGTCTAT+TGG | + | chr1_2:8859948-8859967 | Msa0054170:intron | 40.0% | |
| GAGCCTATTCAAGGTCTATT+GGG | + | chr1_2:8859949-8859968 | Msa0054170:intron | 40.0% | |
| !! | CGGTTTTGTAAGGTTGAGTT+AGG | + | chr1_2:8860118-8860137 | Msa0054170:intron | 40.0% |
| !!! | TCTTCGCATTTTGAGGTCAA+GGG | + | chr1_2:8860412-8860431 | Msa0054170:CDS | 40.0% |
| ! | CTTTTGGCAACATCTGTAGT+TGG | - | chr1_2:8860621-8860640 | None:intergenic | 40.0% |
| CAACTACAGATGTTGCCAAA+AGG | + | chr1_2:8860619-8860638 | Msa0054170:CDS | 40.0% | |
| TAAAGGAAGGTCTAACAGGT+AGG | - | chr1_2:8860689-8860708 | None:intergenic | 40.0% | |
| ! | CGAACAGGCTTTATAAAGGA+AGG | - | chr1_2:8860702-8860721 | None:intergenic | 40.0% |
| TCAAGAACATGGCATACCTT+TGG | - | chr1_2:8860726-8860745 | None:intergenic | 40.0% | |
| ! | GAGAGATCAGACTTGATAAC+TGG | + | chr1_2:8861107-8861126 | Msa0054170:intron | 40.0% |
| GCAGATACCAATCAAACACA+TGG | - | chr1_2:8861493-8861512 | None:intergenic | 40.0% | |
| GATTGTCGAGCTTCTCTAAT+AGG | + | chr1_2:8861591-8861610 | Msa0054170:intron | 40.0% | |
| ACTAAGGAGAGATTTAGGGA+TGG | + | chr1_2:8861618-8861637 | Msa0054170:CDS | 40.0% | |
| TCCTGCTGTATTATTGATGG+GGG | + | chr1_2:8861651-8861670 | Msa0054170:CDS | 40.0% | |
| ATCACAAGAATCTGACCTGT+GGG | - | chr1_2:8861748-8861767 | None:intergenic | 40.0% | |
| TGATTGGAAGATTCCAGTGA+AGG | + | chr1_2:8861810-8861829 | Msa0054170:CDS | 40.0% | |
| TGATACACTAATTGTTCCGG+CGG | + | chr1_2:8861836-8861855 | Msa0054170:intron | 40.0% | |
| TCAAGTAAAATCACAACCGC+CGG | - | chr1_2:8861855-8861874 | None:intergenic | 40.0% | |
| CTCACACTAGAAACTTTGCT+AGG | - | chr1_2:8862197-8862216 | None:intergenic | 40.0% | |
| TACGCCCAAGTGATTGAATA+TGG | + | chr1_2:8863014-8863033 | Msa0054170:intron | 40.0% | |
| ! | TTCCTTTGATTTCAGGAAGC+GGG | + | chr1_2:8863054-8863073 | Msa0054170:intron | 40.0% |
| GGAGATAGCGAAAATTGTTG+CGG | + | chr1_2:8863131-8863150 | Msa0054170:CDS | 40.0% | |
| !! | AAAATTGTTGCGGACTGGTT+TGG | + | chr1_2:8863141-8863160 | Msa0054170:CDS | 40.0% |
| !!! | GCTTTTAGTTCATCGGCTTT+TGG | - | chr1_2:8863168-8863187 | None:intergenic | 40.0% |
| TGCATTAAAACTAGCAAGGC+CGG | + | chr1_2:8863200-8863219 | Msa0054170:CDS | 40.0% | |
| GTACAGCTTAATCAACACTG+AGG | + | chr1_2:8863295-8863314 | Msa0054170:intron | 40.0% | |
| TTTAGCATTCTTTGCTCCCT+TGG | + | chr1_2:8863479-8863498 | Msa0054170:intron | 40.0% | |
| !! | TTAGAAGTGTTGAGCTATGG+CGG | + | chr1_2:8863691-8863710 | Msa0054170:intron | 40.0% |
| !! | CTCTACTCTAGTTCTTAGAG+GGG | - | chr1_2:8863941-8863960 | None:intergenic | 40.0% |
| !! | CCTCTACTCTAGTTCTTAGA+GGG | - | chr1_2:8863942-8863961 | None:intergenic | 40.0% |
| ! | CCTCTAAGAACTAGAGTAGA+GGG | + | chr1_2:8863940-8863959 | Msa0054170:intron | 40.0% |
| !! | ATTATAAGTGCTTGCTGTGG+GGG | + | chr1_2:8864007-8864026 | Msa0054170:intron | 40.0% |
| !!! | GCATCAAGCTTCTTTTTTGG+AGG | - | chr1_2:8864047-8864066 | None:intergenic | 40.0% |
| TGTTCTCAGCAAGTGATCTT+TGG | + | chr1_2:8864204-8864223 | Msa0054170:intron | 40.0% | |
| ! | TCTTTTGTAACACGCGTAGC+TGG | - | chr1_2:8857937-8857956 | None:intergenic | 45.0% |
| ! | GCGGTGGTGGTTATAAGTTT+AGG | + | chr1_2:8858142-8858161 | Msa0054170:CDS | 45.0% |
| CTGTTAGGGTTCATTGTGAG+AGG | + | chr1_2:8858190-8858209 | Msa0054170:CDS | 45.0% | |
| CATTGTGAGAGGATTCCGAT+TGG | + | chr1_2:8858201-8858220 | Msa0054170:CDS | 45.0% | |
| !! | GGAATGGTGTTGGTGGAAAT+GGG | + | chr1_2:8858277-8858296 | Msa0054170:CDS | 45.0% |
| ! | GTGTTGGTGGAAATGGGAAT+CGG | + | chr1_2:8858283-8858302 | Msa0054170:CDS | 45.0% |
| ! | TGTTGGTGGAAATGGGAATC+GGG | + | chr1_2:8858284-8858303 | Msa0054170:CDS | 45.0% |
| !! | AAATGGGAATCGGGTTGATG+TGG | + | chr1_2:8858293-8858312 | Msa0054170:CDS | 45.0% |
| GAAGGATTGGGATTGAAGAG+TGG | + | chr1_2:8858321-8858340 | Msa0054170:CDS | 45.0% | |
| ATTGGGATTGAAGAGTGGTG+AGG | + | chr1_2:8858326-8858345 | Msa0054170:CDS | 45.0% | |
| TTGGGATTGAAGAGTGGTGA+GGG | + | chr1_2:8858327-8858346 | Msa0054170:CDS | 45.0% | |
| TGAGGGGAAGAAAGTGAAGA+AGG | + | chr1_2:8858344-8858363 | Msa0054170:CDS | 45.0% | |
| TTGATGAGTGATACTGGTGG+TGG | + | chr1_2:8858375-8858394 | Msa0054170:CDS | 45.0% | |
| AGTGTGTGGTTTCTACGTCA+GGG | - | chr1_2:8858641-8858660 | None:intergenic | 45.0% | |
| AGAAACCACACACTGACATG+TGG | + | chr1_2:8858647-8858666 | Msa0054170:intron | 45.0% | |
| GTTAAAAGTGGGGGCTAACT+TGG | + | chr1_2:8858961-8858980 | Msa0054170:intron | 45.0% | |
| GGAATTTGATTGAACGGCCA+AGG | - | chr1_2:8859224-8859243 | None:intergenic | 45.0% | |
| TAGTAGGTCATCCTCCACAA+CGG | - | chr1_2:8859278-8859297 | None:intergenic | 45.0% | |
| TTGTGGAGGATGACCTACTA+TGG | + | chr1_2:8859278-8859297 | Msa0054170:CDS | 45.0% | |
| GAGGATGACCTACTATGGAA+CGG | + | chr1_2:8859283-8859302 | Msa0054170:CDS | 45.0% | |
| TGACTGATGAACTAGACGTG+GGG | - | chr1_2:8859309-8859328 | None:intergenic | 45.0% | |
| GAACTGGATTTCTCTAGTGG+TGG | + | chr1_2:8859602-8859621 | Msa0054170:intron | 45.0% | |
| AAAATGACCGCACGGTAACT+TGG | + | chr1_2:8859740-8859759 | Msa0054170:intron | 45.0% | |
| GGCAATATTTCAGCACGGTT+CGG | + | chr1_2:8859761-8859780 | Msa0054170:intron | 45.0% | |
| GTTGCAATGTGCTTCCACAT+TGG | + | chr1_2:8859856-8859875 | Msa0054170:intron | 45.0% | |
| TGGCCCAATAGACCTTGAAT+AGG | - | chr1_2:8859955-8859974 | None:intergenic | 45.0% | |
| CTATCATGTCTCCCACTACT+GGG | + | chr1_2:8859979-8859998 | Msa0054170:intron | 45.0% | |
| GTTTGTCAAGAGTCCCACAT+TGG | + | chr1_2:8860038-8860057 | Msa0054170:intron | 45.0% | |
| ! | ACGTTCCTCTTCGCATTTTG+AGG | + | chr1_2:8860405-8860424 | Msa0054170:CDS | 45.0% |
| CTTGACCTCAAAATGCGAAG+AGG | - | chr1_2:8860413-8860432 | None:intergenic | 45.0% | |
| !!! | CTCTTCGCATTTTGAGGTCA+AGG | + | chr1_2:8860411-8860430 | Msa0054170:CDS | 45.0% |
| !!! | CTTCGCATTTTGAGGTCAAG+GGG | + | chr1_2:8860413-8860432 | Msa0054170:CDS | 45.0% |
| TGTTGCCAAAAGGGCAATGA+AGG | + | chr1_2:8860629-8860648 | Msa0054170:CDS | 45.0% | |
| ! | TGGCCGAACAGGCTTTATAA+AGG | - | chr1_2:8860706-8860725 | None:intergenic | 45.0% |
| TATAAAGCCTGTTCGGCCAA+AGG | + | chr1_2:8860707-8860726 | Msa0054170:CDS | 45.0% | |
| ATCAAGTCTGATCTCTCCCT+AGG | - | chr1_2:8861104-8861123 | None:intergenic | 45.0% | |
| TGGTATCTGCTTTGGCTGAT+TGG | + | chr1_2:8861503-8861522 | Msa0054170:intron | 45.0% | |
| GAGAGATTTAGGGATGGATG+AGG | + | chr1_2:8861624-8861643 | Msa0054170:CDS | 45.0% | |
| CCTGCTGTATTATTGATGGG+GGG | + | chr1_2:8861652-8861671 | Msa0054170:CDS | 45.0% | |
| GATCACAAGAATCTGACCTG+TGG | - | chr1_2:8861749-8861768 | None:intergenic | 45.0% | |
| GGTCAGATTCTTGTGATCTG+TGG | + | chr1_2:8861751-8861770 | Msa0054170:CDS | 45.0% | |
| GGTCAAGGTAGAAGATGTCT+GGG | + | chr1_2:8862328-8862347 | Msa0054170:intron | 45.0% | |
| GTCAAGGTAGAAGATGTCTG+GGG | + | chr1_2:8862329-8862348 | Msa0054170:intron | 45.0% | |
| AAGGTTGGATCTCATTGTCG+CGG | + | chr1_2:8862470-8862489 | Msa0054170:intron | 45.0% | |
| AAATGATTACATTGCCGGGC+AGG | + | chr1_2:8862606-8862625 | Msa0054170:CDS | 45.0% | |
| TTCATGACAAGGTCGAGGAA+TGG | - | chr1_2:8862652-8862671 | None:intergenic | 45.0% | |
| GCTATGGCAGTAGAGCATAT+AGG | - | chr1_2:8862877-8862896 | None:intergenic | 45.0% | |
| TAGCGAAAATTGTTGCGGAC+TGG | + | chr1_2:8863136-8863155 | Msa0054170:CDS | 45.0% | |
| TTACTAGCTCGTGCATGTCA+TGG | - | chr1_2:8863245-8863264 | None:intergenic | 45.0% | |
| AATGTGAAAGGCAGCAAAGG+TGG | + | chr1_2:8863347-8863366 | Msa0054170:intron | 45.0% | |
| ! | CCCTCTAAGAACTAGAGTAG+AGG | + | chr1_2:8863939-8863958 | Msa0054170:intron | 45.0% |
| !! | CCCTCTACTCTAGTTCTTAG+AGG | - | chr1_2:8863943-8863962 | None:intergenic | 45.0% |
| CTTCAACAACCTCACACGTG+TGG | + | chr1_2:8858077-8858096 | Msa0054170:CDS | 50.0% | |
| ! | ATGATGATGCCACACGTGTG+AGG | - | chr1_2:8858089-8858108 | None:intergenic | 50.0% |
| !! | GGGAATGGTGTTGGTGGAAA+TGG | + | chr1_2:8858276-8858295 | Msa0054170:CDS | 50.0% |
| !! | CGGGTTGATGTGGAAGATGA+AGG | + | chr1_2:8858303-8858322 | Msa0054170:CDS | 50.0% |
| TGGGATTGAAGAGTGGTGAG+GGG | + | chr1_2:8858328-8858347 | Msa0054170:CDS | 50.0% | |
| CAGTGTGTGGTTTCTACGTC+AGG | - | chr1_2:8858642-8858661 | None:intergenic | 50.0% | |
| TATGGTCTGAGCACACACCT+TGG | + | chr1_2:8859204-8859223 | Msa0054170:CDS | 50.0% | |
| TGGTGAAACATGGACCGTTG+TGG | + | chr1_2:8859261-8859280 | Msa0054170:CDS | 50.0% | |
| TGAAACATGGACCGTTGTGG+AGG | + | chr1_2:8859264-8859283 | Msa0054170:CDS | 50.0% | |
| ! | TGGAAGCACATTGCAACTGC+AGG | - | chr1_2:8859853-8859872 | None:intergenic | 50.0% |
| GGGCCTAATCTCATCCAATG+TGG | - | chr1_2:8859873-8859892 | None:intergenic | 50.0% | |
| ! | GTAGTGGGAGACATGATAGC+TGG | - | chr1_2:8859978-8859997 | None:intergenic | 50.0% |
| GCTATCATGTCTCCCACTAC+TGG | + | chr1_2:8859978-8859997 | Msa0054170:intron | 50.0% | |
| !! | AAAACCGGCTTGCAAGGTGA+GGG | - | chr1_2:8860105-8860124 | None:intergenic | 50.0% |
| !! | CCTTACAAAACCGGCTTGCA+AGG | - | chr1_2:8860111-8860130 | None:intergenic | 50.0% |
| !! | CCTTGCAAGCCGGTTTTGTA+AGG | + | chr1_2:8860108-8860127 | Msa0054170:intron | 50.0% |
| AGAGGAACGTGTTGCATCAG+TGG | - | chr1_2:8860395-8860414 | None:intergenic | 50.0% | |
| TGAGCACATGCCATCCAACA+TGG | + | chr1_2:8860477-8860496 | Msa0054170:CDS | 50.0% | |
| ! | TCCAGCCTTCATTGCCCTTT+TGG | - | chr1_2:8860637-8860656 | None:intergenic | 50.0% |
| AGTCTGATCTCTCCCTAGGT+GGG | - | chr1_2:8861100-8861119 | None:intergenic | 50.0% | |
| AAGTCTGATCTCTCCCTAGG+TGG | - | chr1_2:8861101-8861120 | None:intergenic | 50.0% | |
| CCCCCCATCAATAATACAGC+AGG | - | chr1_2:8861655-8861674 | None:intergenic | 50.0% | |
| GCTGTATTATTGATGGGGGG+AGG | + | chr1_2:8861655-8861674 | Msa0054170:CDS | 50.0% | |
| TTATTGATGGGGGGAGGTGA+AGG | + | chr1_2:8861661-8861680 | Msa0054170:CDS | 50.0% | |
| GTCCCATTGAAGCTACTGCT+CGG | + | chr1_2:8861689-8861708 | Msa0054170:CDS | 50.0% | |
| TCCCATTGAAGCTACTGCTC+GGG | + | chr1_2:8861690-8861709 | Msa0054170:CDS | 50.0% | |
| GGGTCAAGGTAGAAGATGTC+TGG | + | chr1_2:8862327-8862346 | Msa0054170:intron | 50.0% | |
| ATTGCAGAGGCCATGATTCG+AGG | + | chr1_2:8862568-8862587 | Msa0054170:CDS | 50.0% | |
| AATAGGCAGGCCTCGAATCA+TGG | - | chr1_2:8862581-8862600 | None:intergenic | 50.0% | |
| TGAGAACCACATTACCTGCC+CGG | - | chr1_2:8862623-8862642 | None:intergenic | 50.0% | |
| TGCCCGCTTCCTGAAATCAA+AGG | - | chr1_2:8863059-8863078 | None:intergenic | 50.0% | |
| TCCGATTGGATTCGCTTCGC+TGG | + | chr1_2:8858215-8858234 | Msa0054170:CDS | 55.0% | |
| CCCAGCGAAGCGAATCCAAT+CGG | - | chr1_2:8858219-8858238 | None:intergenic | 55.0% | |
| CCGATTGGATTCGCTTCGCT+GGG | + | chr1_2:8858216-8858235 | Msa0054170:CDS | 55.0% | |
| !! | GCTTCGCTGGGAGTTGATGA+CGG | + | chr1_2:8858228-8858247 | Msa0054170:CDS | 55.0% |
| GTCTGCCACATGTCAGTGTG+TGG | - | chr1_2:8858655-8858674 | None:intergenic | 55.0% | |
| CACTGACATGTGGCAGACAC+TGG | + | chr1_2:8858657-8858676 | Msa0054170:intron | 55.0% | |
| GTGGGAGACATGATAGCTGG+TGG | - | chr1_2:8859975-8859994 | None:intergenic | 55.0% | |
| ATGGAGCATGGCCCAGTAGT+GGG | - | chr1_2:8859993-8860012 | None:intergenic | 55.0% | |
| AATGGAGCATGGCCCAGTAG+TGG | - | chr1_2:8859994-8860013 | None:intergenic | 55.0% | |
| !! | CAAAACCGGCTTGCAAGGTG+AGG | - | chr1_2:8860106-8860125 | None:intergenic | 55.0% |
| GCCAAAAGGGCAATGAAGGC+TGG | + | chr1_2:8860633-8860652 | Msa0054170:CDS | 55.0% | |
| TGGCATACCTTTGGCCGAAC+AGG | - | chr1_2:8860717-8860736 | None:intergenic | 55.0% | |
| AATCTGAGCTGGTCCCACCT+AGG | + | chr1_2:8861084-8861103 | Msa0054170:intron | 55.0% | |
| ATCTGAGCTGGTCCCACCTA+GGG | + | chr1_2:8861085-8861104 | Msa0054170:intron | 55.0% | |
| GCCCGAGCAGTAGCTTCAAT+GGG | - | chr1_2:8861694-8861713 | None:intergenic | 55.0% | |
| TGCCCGAGCAGTAGCTTCAA+TGG | - | chr1_2:8861695-8861714 | None:intergenic | 55.0% | |
| !! | TTGCTTTTGTAGGCTGGCCC+AGG | + | chr1_2:8862541-8862560 | Msa0054170:intron | 55.0% |
| !! | TGCTTTTGTAGGCTGGCCCA+GGG | + | chr1_2:8862542-8862561 | Msa0054170:intron | 55.0% |
| TGGCCTCTGCAATTGTCCCT+GGG | - | chr1_2:8862561-8862580 | None:intergenic | 55.0% | |
| ATGGCCTCTGCAATTGTCCC+TGG | - | chr1_2:8862562-8862581 | None:intergenic | 55.0% | |
| ACATTGCCGGGCAGGTAATG+TGG | + | chr1_2:8862614-8862633 | Msa0054170:intron | 55.0% | |
| TGAGCTATGGCGGCTCATCA+TGG | + | chr1_2:8863701-8863720 | Msa0054170:intron | 55.0% | |
| TATGGCGGCTCATCATGGTC+AGG | + | chr1_2:8863706-8863725 | Msa0054170:intron | 55.0% | |
| !! | TCGCTGGGAGTTGATGACGG+TGG | + | chr1_2:8858231-8858250 | Msa0054170:CDS | 60.0% |
| !! | CTGGGAGTTGATGACGGTGG+TGG | + | chr1_2:8858234-8858253 | Msa0054170:CDS | 60.0% |
| !! | GGAGTTGATGACGGTGGTGG+TGG | + | chr1_2:8858237-8858256 | Msa0054170:CDS | 60.0% |
| !! | GTTGATGACGGTGGTGGTGG+TGG | + | chr1_2:8858240-8858259 | Msa0054170:CDS | 60.0% |
| !! | TGGTGGTGGTGTTGGTGGTG+AGG | + | chr1_2:8858254-8858273 | Msa0054170:CDS | 60.0% |
| !! | GGTGGTGGTGTTGGTGGTGA+GGG | + | chr1_2:8858255-8858274 | Msa0054170:CDS | 60.0% |
| !! | GTGGTGGTGTTGGTGGTGAG+GGG | + | chr1_2:8858256-8858275 | Msa0054170:CDS | 60.0% |
| !! | GGTGTTGGTGGTGAGGGGAA+TGG | + | chr1_2:8858261-8858280 | Msa0054170:CDS | 60.0% |
| GGTGGTGAGGGGAATGGTGT+TGG | + | chr1_2:8858267-8858286 | Msa0054170:CDS | 60.0% | |
| ! | GGTGAGGGGAATGGTGTTGG+TGG | + | chr1_2:8858270-8858289 | Msa0054170:CDS | 60.0% |
| ACGTGGGGCCGTTCCATAGT+AGG | - | chr1_2:8859294-8859313 | None:intergenic | 60.0% | |
| ! | ATGGGGGGAGGTGAAGGCAT+GGG | + | chr1_2:8861667-8861686 | Msa0054170:CDS | 60.0% |
| GAAGCTACTGCTCGGGCACT+TGG | + | chr1_2:8861697-8861716 | Msa0054170:CDS | 60.0% | |
| AATGACGAGGGGGTTCCCAC+AGG | + | chr1_2:8861730-8861749 | Msa0054170:CDS | 60.0% | |
| TGGCCCAGGGACAATTGCAG+AGG | + | chr1_2:8862555-8862574 | Msa0054170:CDS | 60.0% | |
| !! | GACGGTGGTGGTGGTGGTGT+TGG | + | chr1_2:8858246-8858265 | Msa0054170:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGTGTTGG+TGG | + | chr1_2:8858249-8858268 | Msa0054170:CDS | 65.0% |
| GCGTCCCTCACCTTGCAAGC+CGG | + | chr1_2:8860098-8860117 | Msa0054170:intron | 65.0% | |
| GATGGGGGGAGGTGAAGGCA+TGG | + | chr1_2:8861666-8861685 | Msa0054170:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 8857649 | 8864332 | 8857649 | ID=Msa0054170;Name=Msa0054170 |
| chr1_2 | mRNA | 8857649 | 8864332 | 8857649 | ID=Msa0054170-mRNA-1;Parent=Msa0054170;Name=Msa0054170-mRNA-1;_AED=0.15;_eAED=0.15;_QI=276|0.87|0.77|0.88|1|1|9|0|560 |
| chr1_2 | exon | 8857649 | 8858461 | 8857649 | ID=Msa0054170-mRNA-1:exon:3166;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8859188 | 8859360 | 8859188 | ID=Msa0054170-mRNA-1:exon:3167;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8860337 | 8860498 | 8860337 | ID=Msa0054170-mRNA-1:exon:3168;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8860587 | 8860728 | 8860587 | ID=Msa0054170-mRNA-1:exon:3169;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8861613 | 8861831 | 8861613 | ID=Msa0054170-mRNA-1:exon:3170;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8862410 | 8862472 | 8862410 | ID=Msa0054170-mRNA-1:exon:3171;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8862553 | 8862627 | 8862553 | ID=Msa0054170-mRNA-1:exon:3172;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8863069 | 8863260 | 8863069 | ID=Msa0054170-mRNA-1:exon:3173;Parent=Msa0054170-mRNA-1 |
| chr1_2 | exon | 8864213 | 8864332 | 8864213 | ID=Msa0054170-mRNA-1:exon:3174;Parent=Msa0054170-mRNA-1 |
| chr1_2 | five_prime_UTR | 8857649 | 8857924 | 8857649 | ID=Msa0054170-mRNA-1:five_prime_utr;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8857925 | 8858461 | 8857925 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8859188 | 8859360 | 8859188 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8860337 | 8860498 | 8860337 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8860587 | 8860728 | 8860587 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8861613 | 8861831 | 8861613 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8862410 | 8862472 | 8862410 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8862553 | 8862627 | 8862553 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8863069 | 8863260 | 8863069 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| chr1_2 | CDS | 8864213 | 8864332 | 8864213 | ID=Msa0054170-mRNA-1:cds;Parent=Msa0054170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
