AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055840 MtrunA17_Chr1g0148421 82.781 302 22 4 34 305 1 302 1.95e-178 494
Msa0055840 MtrunA17_Chr1g0169881 66.013 306 65 4 34 305 1 301 4.72e-143 405
Msa0055840 MtrunA17_Chr3g0138621 65.372 309 70 4 34 305 1 309 4.66e-141 400
Msa0055840 MtrunA17_Chr7g0264931 65.438 217 64 1 100 305 53 269 8.12e-110 320
Msa0055840 MtrunA17_Chr4g0028121 62.802 207 66 1 109 304 98 304 1.88e-98 292
Msa0055840 MtrunA17_Chr2g0286331 54.680 203 81 1 110 301 56 258 2.19e-78 239
Msa0055840 MtrunA17_Chr8g0391161 41.808 177 95 5 128 301 1061 1232 1.29e-38 145
Msa0055840 MtrunA17_Chr6g0484171 41.243 177 96 5 128 301 1051 1222 4.52e-36 137
Msa0055840 MtrunA17_Chr4g0059881 39.560 182 103 5 123 301 1092 1269 2.46e-35 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055840 AT5G25560.4 74.429 219 45 1 98 305 85 303 5.67e-122 352
Msa0055840 AT5G25560.1 74.429 219 45 1 98 305 90 308 8.55e-122 352
Msa0055840 AT5G25560.5 74.429 219 45 1 98 305 90 308 8.55e-122 352
Msa0055840 AT5G25560.6 74.429 219 45 1 98 305 90 308 8.55e-122 352
Msa0055840 AT5G25560.2 74.429 219 45 1 98 305 90 308 8.55e-122 352
Msa0055840 AT5G25560.3 71.179 229 45 1 98 305 90 318 2.22e-120 348
Msa0055840 AT5G22920.1 61.009 218 74 1 98 304 54 271 3.15e-102 301
Msa0055840 AT5G18650.1 58.333 204 74 1 109 301 55 258 2.44e-82 249
Msa0055840 AT5G22920.2 59.239 184 64 1 98 270 54 237 2.18e-81 246
Msa0055840 AT3G62970.1 52.153 209 88 2 105 302 68 275 5.82e-72 224
Msa0055840 AT3G62970.2 52.023 173 72 1 105 266 68 240 2.42e-59 190
Msa0055840 AT3G62970.3 51.534 163 68 1 105 256 68 230 6.00e-55 179
Msa0055840 AT1G74770.1 45.109 184 91 6 123 301 1079 1257 4.09e-43 158
Msa0055840 AT1G18910.1 44.828 174 88 5 131 301 1084 1252 6.94e-42 154
Msa0055840 AT3G18290.1 42.373 177 94 5 128 301 1068 1239 1.23e-38 145
Msa0055840 AT1G74770.2 43.571 140 69 6 123 257 1079 1213 1.53e-26 110

Find 170 sgRNAs with CRISPR-Local

Find 601 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATAACTTGTACTTTAT+AGG 0.169060 1_2:+11159006 None:intergenic
TCTGTCAGTTTCAGCTTCTT+TGG 0.184075 1_2:-11159569 Msa0055840:five_prime_UTR
GTCAAAGGTTTGGGAGAAAT+TGG 0.205837 1_2:-11151393 Msa0055840:CDS
AGCTCCAACAACTTCAAAAT+TGG 0.213420 1_2:+11158244 None:intergenic
ATTATATCAGTTTAGGTTAT+AGG 0.222174 1_2:-11158569 Msa0055840:five_prime_UTR
TTGAACATTCGCACTACTTC+AGG 0.251729 1_2:+11158000 None:intergenic
AAGGATTCCGGATTTGATTT+TGG 0.261066 1_2:+11157211 None:intergenic
GTATTTACTCTTTCTTGATT+TGG 0.261296 1_2:-11159652 Msa0055840:five_prime_UTR
CTTCATATCATGTTATGTTT+AGG 0.283914 1_2:-11159351 Msa0055840:five_prime_UTR
TCGTTTGGTGGATTCGGGTT+AGG 0.283988 1_2:-11150615 Msa0055840:three_prime_UTR
ATTAATGATTATATCAGTTT+AGG 0.291138 1_2:-11158576 Msa0055840:five_prime_UTR
AATCTGTCGTTTGGTGGATT+CGG 0.310339 1_2:-11150621 Msa0055840:three_prime_UTR
GAATGGCTTTGATGCTAGTT+TGG 0.316601 1_2:-11158146 Msa0055840:five_prime_UTR
ATCTGTCGTTTGGTGGATTC+GGG 0.320288 1_2:-11150620 Msa0055840:three_prime_UTR
AAGAATCCTTATGTCATAGA+AGG 0.324300 1_2:+11158034 None:intergenic
TTACCATGGTGCAGACTATA+TGG 0.329862 1_2:-11157902 Msa0055840:exon
TCTTCTCCAGGCAAGGATTC+CGG 0.334834 1_2:+11157199 None:intergenic
TAACACGATTCATTGCTATA+AGG 0.336294 1_2:-11159219 Msa0055840:five_prime_UTR
ACCGGAGAAGATGCCGAATC+AGG 0.343514 1_2:-11157031 Msa0055840:CDS
AGGTCAATCATCTATGTAAC+TGG 0.344820 1_2:+11158657 None:intergenic
ATTAAGTTTCTCACCCCATA+TGG 0.346434 1_2:+11159056 None:intergenic
ACAAATAAAATGAGATGAAA+TGG 0.346674 1_2:+11150788 None:intergenic
TATGTATTGGTTCAACGAAA+TGG 0.348744 1_2:-11150817 Msa0055840:three_prime_UTR
TGAATAGTCTCACAAGTGTT+TGG 0.349126 1_2:-11158917 Msa0055840:five_prime_UTR
CTTAAGTAAGCTAGTTCAAC+TGG 0.349344 1_2:-11158889 Msa0055840:five_prime_UTR
CGTTTGGTGGATTCGGGTTA+GGG 0.351612 1_2:-11150614 Msa0055840:three_prime_UTR
TGAGTTCAATATGATTCAAC+TGG 0.352442 1_2:+11158860 None:intergenic
CAAAATTGGCTTCAAACTCT+TGG 0.352568 1_2:+11158258 None:intergenic
TCTTGTTTGTCGTGTGTTGT+AGG 0.365452 1_2:+11150861 None:intergenic
CAGATGGGGAAGGCATTAAA+AGG 0.366366 1_2:+11158367 None:intergenic
TCAATTAATTATGACCCATA+TGG 0.368369 1_2:-11159071 Msa0055840:five_prime_UTR
AGTGATAATATATATGCTTT+TGG 0.368641 1_2:-11157879 Msa0055840:CDS
CAGCATAAGCATTCTACAAC+TGG 0.369478 1_2:+11158505 None:intergenic
AGTTTCAGCTTCTTTGGATT+CGG 0.375123 1_2:-11159563 Msa0055840:five_prime_UTR
TGAGCTATATCAAAACAAAA+TGG 0.380689 1_2:-11151342 Msa0055840:intron
AATGTTACCTCAAAACAAAC+AGG 0.388889 1_2:+11151851 None:intergenic
CTGTGATATGTCAAAGGTTT+GGG 0.397365 1_2:-11151402 Msa0055840:CDS
TTGTGATAGGTAATGTAGTT+TGG 0.400164 1_2:-11159535 Msa0055840:five_prime_UTR
AAAATCTGAAACAAAATTGC+TGG 0.400253 1_2:+11158434 None:intergenic
TTACATAGATGATTGACCTT+AGG 0.400353 1_2:-11158653 Msa0055840:five_prime_UTR
TACTTGATGCTGTTCTCTCT+TGG 0.403847 1_2:-11150751 Msa0055840:three_prime_UTR
TTTCGAATCTCCAATCTTCA+AGG 0.404332 1_2:+11159764 None:intergenic
TTGCTTCCTGCAGTTGGAGA+TGG 0.406758 1_2:+11158408 None:intergenic
CAATTAATTATGACCCATAT+GGG 0.410514 1_2:-11159070 Msa0055840:five_prime_UTR
GAATAGTCTCACAAGTGTTT+GGG 0.414273 1_2:-11158916 Msa0055840:five_prime_UTR
GGATTCGGTTCTGTTGTGAT+AGG 0.414403 1_2:-11159548 Msa0055840:five_prime_UTR
ACATGACACTAATTATGTAT+TGG 0.417742 1_2:-11150830 Msa0055840:three_prime_UTR
CTGTCTTATTTCGTCAAGCT+TGG 0.420981 1_2:-11158282 Msa0055840:five_prime_UTR
TTATGTTTAGGAGGCGTTTG+AGG 0.421766 1_2:-11159339 Msa0055840:five_prime_UTR
ATGTCTTCGTATCACAATTA+CGG 0.423546 1_2:+11158810 None:intergenic
TATGTTTAGGAGGCGTTTGA+GGG 0.423996 1_2:-11159338 Msa0055840:five_prime_UTR
TACATAGATGATTGACCTTA+GGG 0.430824 1_2:-11158652 Msa0055840:five_prime_UTR
ACAAAATTGCTGGTGCTGTT+TGG 0.432289 1_2:+11158444 None:intergenic
CCCTGATTCGGCATCTTCTC+CGG 0.435085 1_2:+11157030 None:intergenic
TGCACCATGGTAAAATTACT+TGG 0.437351 1_2:+11157912 None:intergenic
TATGTACTTGATTCTTCTCC+AGG 0.439979 1_2:+11157187 None:intergenic
AGCTGCTGTAATCTGTCGTT+TGG 0.443690 1_2:-11150630 Msa0055840:three_prime_UTR
TGGAGGATAAACGCCTTCTT+CGG 0.450394 1_2:+11157231 None:intergenic
AAAATGGAAACGGACATTAG+AGG 0.451363 1_2:+11150912 None:intergenic
AACACGATTCATTGCTATAA+GGG 0.451627 1_2:-11159218 Msa0055840:five_prime_UTR
AACCACTAGAGGCCTGTGAT+AGG 0.452024 1_2:+11158718 None:intergenic
GCCTCGACACCAAGTCAAAC+AGG 0.452342 1_2:-11153582 Msa0055840:intron
GTTGAATCATATTGAACTCA+TGG 0.458110 1_2:-11158857 Msa0055840:five_prime_UTR
ATAAGGGTATCAAGAGGTCT+TGG 0.460888 1_2:-11159202 Msa0055840:five_prime_UTR
CGTTAATTGTGGTGTTTGCA+TGG 0.461112 1_2:-11152979 Msa0055840:CDS
GAGGTCTTGGTTTGGAGGCA+AGG 0.463730 1_2:-11159189 Msa0055840:five_prime_UTR
TTAGGTTGGGGAGTAAGAGT+TGG 0.467999 1_2:-11150656 Msa0055840:three_prime_UTR
GAAGTTGTTGGAGCTTCGTA+TGG 0.470627 1_2:-11158236 Msa0055840:five_prime_UTR
TCAAATCCGGAATCCTTGCC+TGG 0.473220 1_2:-11157205 Msa0055840:CDS
CATATCATGTTATGTTTAGG+AGG 0.473581 1_2:-11159348 Msa0055840:five_prime_UTR
CTACAAGGATGCTGTACACT+TGG 0.475732 1_2:-11150728 Msa0055840:three_prime_UTR
TCTGTGATATGTCAAAGGTT+TGG 0.478142 1_2:-11151403 Msa0055840:CDS
TTTGAGGATAGCTTGTATCA+TGG 0.478756 1_2:-11157317 Msa0055840:intron
GACAACCGCTTATCATGGTA+AGG 0.483673 1_2:+11159028 None:intergenic
TATAGGACAACCGCTTATCA+TGG 0.486082 1_2:+11159023 None:intergenic
TGAACATTCGCACTACTTCA+GGG 0.487185 1_2:+11158001 None:intergenic
TGTCATAGAAGGTTTGCAGC+AGG 0.491209 1_2:+11158045 None:intergenic
GCTGTTCTCTCTTGGCTACA+AGG 0.492755 1_2:-11150743 Msa0055840:three_prime_UTR
GGTATCAAGAGGTCTTGGTT+TGG 0.492904 1_2:-11159197 Msa0055840:five_prime_UTR
TTGAGGATAGCTTGTATCAT+GGG 0.493617 1_2:-11157316 Msa0055840:intron
GTAATGGCTGTGGAATTTGC+AGG 0.495528 1_2:-11152740 Msa0055840:intron
TGCAAACCTTCTATGACATA+AGG 0.498123 1_2:-11158040 Msa0055840:five_prime_UTR
TTATCCTCCAAAATCAAATC+CGG 0.499360 1_2:-11157218 Msa0055840:CDS
TGCTGTAATCTGTCGTTTGG+TGG 0.500552 1_2:-11150627 Msa0055840:three_prime_UTR
AAAGAGTAAATACGAACAAA+CGG 0.503441 1_2:+11159662 None:intergenic
TTGTTGGAGCTTCGTATGGG+TGG 0.506754 1_2:-11158232 Msa0055840:five_prime_UTR
ATTGAAATAAGATTTCACTT+TGG 0.509360 1_2:-11159114 Msa0055840:five_prime_UTR
TTAAGTTTCTCACCCCATAT+GGG 0.516164 1_2:+11159057 None:intergenic
TTTGATCCATCTCCAACTGC+AGG 0.517421 1_2:-11158414 Msa0055840:five_prime_UTR
TTTGCAGATGCCAACACTAC+CGG 0.517868 1_2:-11157049 Msa0055840:intron
GACAGTCACCCCTGTGTGGA+AGG 0.518086 1_2:-11151893 Msa0055840:CDS
AAGAAACATATGACCGAAGA+AGG 0.522486 1_2:-11157244 Msa0055840:CDS
CAGCAAAATTGCGTTAATTG+TGG 0.522657 1_2:-11152990 Msa0055840:CDS
ATCAAGAGGTCTTGGTTTGG+AGG 0.523579 1_2:-11159194 Msa0055840:five_prime_UTR
CAATTAATATTATTTCCCTA+AGG 0.526580 1_2:+11158637 None:intergenic
TAGGTAGAGAAGTCTTTCAC+AGG 0.526998 1_2:-11158550 Msa0055840:five_prime_UTR
GTCATAGAAGGTTTGCAGCA+GGG 0.527633 1_2:+11158046 None:intergenic
TTTGCGCTACAAAATGGAAA+CGG 0.527808 1_2:+11150902 None:intergenic
GGCATCTTCTCCGGTAGTGT+TGG 0.528892 1_2:+11157039 None:intergenic
ACATGAATCAGTGTCGTGTC+TGG 0.529814 1_2:+11159286 None:intergenic
TTTATTTGTTATGAAGGCAG+TGG 0.530197 1_2:-11150774 Msa0055840:three_prime_UTR
TGAAATTTACCTGTTTGTTG+AGG 0.536482 1_2:-11159415 Msa0055840:five_prime_UTR
CCGGAGAAGATGCCGAATCA+GGG 0.537715 1_2:-11157030 Msa0055840:CDS
TTCCTATCACAGGCCTCTAG+TGG 0.537876 1_2:-11158720 Msa0055840:five_prime_UTR
AAGCAGCAGTACCATTGTAA+TGG 0.540337 1_2:-11152756 Msa0055840:CDS
CAGTACCATTGTAATGGCTG+TGG 0.543474 1_2:-11152750 Msa0055840:CDS
ACTTGATTCTTCTCCAGGCA+AGG 0.546025 1_2:+11157192 None:intergenic
TTCAACGCGCTTAGACACAT+TGG 0.548093 1_2:-11150702 Msa0055840:three_prime_UTR
TGCATTGCTCCTTCCACACA+GGG 0.551718 1_2:+11151884 None:intergenic
TTTATTTGTCGGACAGCAAG+AGG 0.555509 1_2:-11158168 Msa0055840:five_prime_UTR
TTGTCTTTAGTAGTGATCCA+TGG 0.558388 1_2:-11159162 Msa0055840:five_prime_UTR
TTCTTCCATTGTAATAAGTG+TGG 0.560145 1_2:-11152051 Msa0055840:intron
ATGCATTGCTCCTTCCACAC+AGG 0.561591 1_2:+11151883 None:intergenic
TGTTGGAGCTTCGTATGGGT+GGG 0.561874 1_2:-11158231 Msa0055840:five_prime_UTR
GAAGAATAAGCGATTATGAG+AGG 0.565584 1_2:+11159841 None:intergenic
ACCTGTTTGACTTGGTGTCG+AGG 0.565593 1_2:+11153581 None:intergenic
TGGATCCTGTGCAATGATTG+TGG 0.566578 1_2:-11150940 Msa0055840:CDS
GACTCAACTGTTCCTATCAC+AGG 0.566714 1_2:-11158730 Msa0055840:five_prime_UTR
TTGTCGGACAGCAAGAGGAA+TGG 0.570006 1_2:-11158163 Msa0055840:five_prime_UTR
ACTTACCACACTTATTACAA+TGG 0.572247 1_2:+11152046 None:intergenic
TGGTAAGTTTCGGTCTCTGG+AGG 0.574504 1_2:-11157859 Msa0055840:CDS
GTTAATTGTGGTGTTTGCAT+GGG 0.576398 1_2:-11152978 Msa0055840:CDS
GTCGGTCTGTGATATGTCAA+AGG 0.586948 1_2:-11151408 Msa0055840:CDS
TGCAACTGCAGAAATACAGA+TGG 0.592512 1_2:+11158351 None:intergenic
TTCGCACTACTTCAGGGTCT+AGG 0.592863 1_2:+11158007 None:intergenic
ATAAGAATACCTGTTTGACT+TGG 0.598715 1_2:+11153573 None:intergenic
GCAACTGCAGAAATACAGAT+GGG 0.599931 1_2:+11158352 None:intergenic
ATGCCCTCTCTGTTCAAAGT+CGG 0.600364 1_2:-11151426 Msa0055840:CDS
CTTTCACAGGGCATCCGAAG+TGG 0.601324 1_2:-11158537 Msa0055840:five_prime_UTR
GATAGCTTGTATCATGGGCG+AGG 0.602796 1_2:-11157311 Msa0055840:CDS
TTTACAACACAAACCACTAG+AGG 0.603969 1_2:+11158707 None:intergenic
GTCGTGTCTGGTGTATGTGT+CGG 0.607368 1_2:+11159298 None:intergenic
AGCTTGTATCATGGGCGAGG+TGG 0.609164 1_2:-11157308 Msa0055840:CDS
GCGGTGACTGTGTGACATCA+AGG 0.609481 1_2:+11158781 None:intergenic
TCACCGACACTTCTAATCAA+AGG 0.612644 1_2:+11159246 None:intergenic
TTATGGATTGTATGTCCGCA+CGG 0.613243 1_2:+11151575 None:intergenic
TACAACACACGACAAACAAG+AGG 0.613863 1_2:-11150859 Msa0055840:CDS
AAGTTGTTGGAGCTTCGTAT+GGG 0.616841 1_2:-11158235 Msa0055840:five_prime_UTR
TAAGCCCTTACCATGATAAG+CGG 0.617684 1_2:-11159033 Msa0055840:five_prime_UTR
GCACCATGGTAAAATTACTT+GGG 0.618262 1_2:+11157913 None:intergenic
TCATTGCATTCAAATTGCAG+AGG 0.622420 1_2:+11157268 None:intergenic
TTGCGAAGTGATATTCGAGA+GGG 0.626596 1_2:+11159877 None:intergenic
GGTTTGGGAGAAATTGGACA+TGG 0.628537 1_2:-11151387 Msa0055840:CDS
TTGCCTCATTGTGACAATGG+CGG 0.629473 1_2:+11156979 None:intergenic
AGACCGACTTTGAACAGAGA+GGG 0.629552 1_2:+11151423 None:intergenic
ACACCTTTGATTAGAAGTGT+CGG 0.631331 1_2:-11159249 Msa0055840:five_prime_UTR
TGCAGAAATACAGATGGGGA+AGG 0.637630 1_2:+11158357 None:intergenic
GAGTTCAATATGATTCAACT+GGG 0.637908 1_2:+11158861 None:intergenic
AGCATAAGCATTCTACAACT+GGG 0.638970 1_2:+11158506 None:intergenic
ACAACCGCTTATCATGGTAA+GGG 0.656781 1_2:+11159029 None:intergenic
GTTGCGAAGTGATATTCGAG+AGG 0.658671 1_2:+11159876 None:intergenic
TGTTGTAGGAATTGCAGTTG+AGG 0.661197 1_2:+11150875 None:intergenic
ACTGGGTAGTAGTTCCACTT+CGG 0.669491 1_2:+11158523 None:intergenic
AATTAATTATGACCCATATG+GGG 0.669812 1_2:-11159069 Msa0055840:five_prime_UTR
ATGGGGAAGGCATTAAAAGG+AGG 0.671654 1_2:+11158370 None:intergenic
AGAAAATGAATGAAAGCACA+AGG 0.672882 1_2:+11150484 None:intergenic
AGGTAGAGAAGTCTTTCACA+GGG 0.675471 1_2:-11158549 Msa0055840:five_prime_UTR
CTAGTCTCTTGTATACACGC+CGG 0.682538 1_2:-11158106 Msa0055840:five_prime_UTR
CAAGCTAATCAATGACACCA+TGG 0.688555 1_2:+11159145 None:intergenic
ATTGCTATAAGGGTATCAAG+AGG 0.689948 1_2:-11159208 Msa0055840:five_prime_UTR
GAGAGACAGTCACCCCTGTG+TGG 0.695181 1_2:-11151897 Msa0055840:CDS
AAATTCCACAGCCATTACAA+TGG 0.701862 1_2:+11152745 None:intergenic
GAACTTTCAACTCTTCACGA+CGG 0.711527 1_2:+11159712 None:intergenic
CAACTGCAGAAATACAGATG+GGG 0.716883 1_2:+11158353 None:intergenic
ATGTTACCTCAAAACAAACA+GGG 0.725565 1_2:+11151852 None:intergenic
ACTCCATATAGTCTGCACCA+TGG 0.733549 1_2:+11157899 None:intergenic
CAGACCGACTTTGAACAGAG+AGG 0.734899 1_2:+11151422 None:intergenic
CTTGACGAAATAAGACAGCG+TGG 0.740760 1_2:+11158287 None:intergenic
GCATTGCTCCTTCCACACAG+GGG 0.763708 1_2:+11151885 None:intergenic
GATGTCATTGTTATGCCGTG+CGG 0.812135 1_2:-11151590 Msa0055840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATGATGATTTTTT+TGG - chr1_2:11150924-11150943 Msa0055840:CDS 10.0%
!!! ATTATTATGATGATTTTTTT+GGG - chr1_2:11150925-11150944 Msa0055840:CDS 10.0%
!! TATATAAATATGAAATAAGA+TGG + chr1_2:11153548-11153567 None:intergenic 10.0%
!! TTTATATTTATTTAGATGAA+AGG + chr1_2:11153792-11153811 None:intergenic 10.0%
!!! TATTAACTTGTAAATTTTTA+TGG + chr1_2:11154376-11154395 None:intergenic 10.0%
!!! AAATTTTTTTATTAGCATTA+CGG + chr1_2:11156945-11156964 None:intergenic 10.0%
!! GATATAGAATTTATTTATAA+AGG - chr1_2:11157060-11157079 Msa0055840:intron 10.0%
!!! CATGTAAATTTTATAATAAA+GGG + chr1_2:11158059-11158078 None:intergenic 10.0%
!!! ACATGTAAATTTTATAATAA+AGG + chr1_2:11158060-11158079 None:intergenic 10.0%
!!! AGTTGTAAATATTTTAATTA+GGG - chr1_2:11158699-11158718 Msa0055840:five_prime_UTR 10.0%
!!! TTATTATGATGATTTTTTTG+GGG - chr1_2:11150926-11150945 Msa0055840:CDS 15.0%
!! ATTAATGATTATATCAGTTT+AGG - chr1_2:11151846-11151865 Msa0055840:intron 15.0%
!!! TTTATTTTATTATCCACAAA+GGG + chr1_2:11152623-11152642 None:intergenic 15.0%
!!! AAGAATTAGTTCTAATTAAT+AGG + chr1_2:11154085-11154104 None:intergenic 15.0%
!!! GTATAATAGTTTAAGATATT+CGG + chr1_2:11154228-11154247 None:intergenic 15.0%
!! TAAGATTTATGTCTTATATA+AGG + chr1_2:11155054-11155073 None:intergenic 15.0%
!! ATATAAGACATAAATCTTAA+AGG - chr1_2:11155055-11155074 Msa0055840:intron 15.0%
!! TATAAGACATAAATCTTAAA+GGG - chr1_2:11155056-11155075 Msa0055840:intron 15.0%
!!! TAAAAAAATAACAGCTTTTA+AGG - chr1_2:11156249-11156268 Msa0055840:intron 15.0%
!! AGTGAAAATTTAATTGTAAT+TGG - chr1_2:11156582-11156601 Msa0055840:intron 15.0%
!! TAAAAAAATTTGATGTATAC+AGG - chr1_2:11156954-11156973 Msa0055840:intron 15.0%
!! ATAAAATTTACATGTCATAT+TGG - chr1_2:11158065-11158084 Msa0055840:five_prime_UTR 15.0%
!!! GAGTTGTAAATATTTTAATT+AGG - chr1_2:11158698-11158717 Msa0055840:five_prime_UTR 15.0%
!! TAATTAGGGTTAATTTAAAT+TGG - chr1_2:11158713-11158732 Msa0055840:five_prime_UTR 15.0%
!!! TTAATTTTTGGCAAATTAAA+AGG - chr1_2:11159234-11159253 Msa0055840:five_prime_UTR 15.0%
!! ATTGAAATAAGATTTCACTT+TGG - chr1_2:11151308-11151327 Msa0055840:intron 20.0%
!!! AGAAATAACTTGTACTTTAT+AGG + chr1_2:11151419-11151438 None:intergenic 20.0%
!! CAATTAATATTATTTCCCTA+AGG + chr1_2:11151788-11151807 None:intergenic 20.0%
!!! ATTATATCAGTTTAGGTTAT+AGG - chr1_2:11151853-11151872 Msa0055840:intron 20.0%
!!! ATCCATTTGTTTTTATTTGT+CGG - chr1_2:11152243-11152262 Msa0055840:intron 20.0%
!!! AGTGATAATATATATGCTTT+TGG - chr1_2:11152543-11152562 Msa0055840:intron 20.0%
!!! GTTTATTTTATTATCCACAA+AGG + chr1_2:11152624-11152643 None:intergenic 20.0%
!! TGATTTATTGCTTTCAAAAT+AGG - chr1_2:11152685-11152704 Msa0055840:intron 20.0%
!!! ATATAACTTGTAGAAGTTTT+AGG - chr1_2:11153008-11153027 Msa0055840:intron 20.0%
!!! AAGTCTAATTTTATGGAAAA+AGG + chr1_2:11153351-11153370 None:intergenic 20.0%
!!! GCAAATAAAGTCTAATTTTA+TGG + chr1_2:11153358-11153377 None:intergenic 20.0%
!!! TGATTGTTACTTAAATGATA+TGG - chr1_2:11153520-11153539 Msa0055840:intron 20.0%
!! TATTTATTTAGATGAAAGGA+GGG + chr1_2:11153788-11153807 None:intergenic 20.0%
!! ATATTTATTTAGATGAAAGG+AGG + chr1_2:11153789-11153808 None:intergenic 20.0%
!! TCTTATAACTGTATATTATG+TGG + chr1_2:11153961-11153980 None:intergenic 20.0%
!! TTGTGTTAAATTACAAGAAA+AGG - chr1_2:11154009-11154028 Msa0055840:intron 20.0%
!! TAATTAATAGGTGAATTAGT+AGG + chr1_2:11154073-11154092 None:intergenic 20.0%
!! GAGATTATTCACAATTTATT+TGG + chr1_2:11154151-11154170 None:intergenic 20.0%
!! TAATTGAAGTTAATCAGAAA+AGG + chr1_2:11154440-11154459 None:intergenic 20.0%
!! CTGATTAACTTCAATTATTT+CGG - chr1_2:11154443-11154462 Msa0055840:intron 20.0%
!! ATAAGACATAAATCTTAAAG+GGG - chr1_2:11155057-11155076 Msa0055840:intron 20.0%
!!! ATTTTTTGGTCTTTCAAAAA+TGG + chr1_2:11155964-11155983 None:intergenic 20.0%
!!! CTTTTCAAATCTCTATTTTT+TGG + chr1_2:11155978-11155997 None:intergenic 20.0%
!!! GTTTTTCTTGTTCATTTTAT+TGG - chr1_2:11156407-11156426 Msa0055840:intron 20.0%
!! CATGCATAAAGAAAATAATA+TGG - chr1_2:11157178-11157197 Msa0055840:intron 20.0%
!!! GATTTTTACTACTTAATTTC+AGG - chr1_2:11157407-11157426 Msa0055840:intron 20.0%
!!! TTTTCAGTCTACTTTATTAT+AGG - chr1_2:11157807-11157826 Msa0055840:intron 20.0%
!! CTTGTTCAAAGTTTATTAAT+TGG + chr1_2:11158618-11158637 None:intergenic 20.0%
!! TCCTGTAATAGTTATTATAT+CGG - chr1_2:11158667-11158686 Msa0055840:five_prime_UTR 20.0%
!!! TTGTTTTTTAATTGTGTATC+AGG - chr1_2:11158968-11158987 Msa0055840:five_prime_UTR 20.0%
!! ACAAATAAAATGAGATGAAA+TGG + chr1_2:11159637-11159656 None:intergenic 20.0%
!!! TCTCATTTTATTTGTTATGA+AGG - chr1_2:11159642-11159661 Msa0055840:five_prime_UTR 20.0%
! AAAGAGTAAATACGAACAAA+CGG + chr1_2:11150763-11150782 None:intergenic 25.0%
! GTATTTACTCTTTCTTGATT+TGG - chr1_2:11150770-11150789 Msa0055840:three_prime_UTR 25.0%
!!! TTGTTTTGTTTTGTTTGTTG+TGG - chr1_2:11151033-11151052 Msa0055840:intron 25.0%
! CTTCATATCATGTTATGTTT+AGG - chr1_2:11151071-11151090 Msa0055840:intron 25.0%
! TCAATTAATTATGACCCATA+TGG - chr1_2:11151351-11151370 Msa0055840:CDS 25.0%
! CAATTAATTATGACCCATAT+GGG - chr1_2:11151352-11151371 Msa0055840:CDS 25.0%
! AATTAATTATGACCCATATG+GGG - chr1_2:11151353-11151372 Msa0055840:CDS 25.0%
!! TATGAGAGAGCAAATTTTTA+TGG - chr1_2:11151809-11151828 Msa0055840:intron 25.0%
!! ATGAGAGAGCAAATTTTTAT+GGG - chr1_2:11151810-11151829 Msa0055840:intron 25.0%
!! AGATATGAGTCTGTAATTTT+TGG - chr1_2:11151943-11151962 Msa0055840:intron 25.0%
!! AAAATCTGAAACAAAATTGC+TGG + chr1_2:11151991-11152010 None:intergenic 25.0%
!! TATATGCTTTTGGTAAGTTT+CGG - chr1_2:11152553-11152572 Msa0055840:intron 25.0%
!! AAATAGGTTGAAGTTTCTAT+TGG - chr1_2:11152701-11152720 Msa0055840:intron 25.0%
! CAACACAAAATCATATTATG+AGG + chr1_2:11152909-11152928 None:intergenic 25.0%
! TATCAACTAGATCTAGAAAT+AGG + chr1_2:11153079-11153098 None:intergenic 25.0%
!!! CTAGTTGATAATCTTATTTG+AGG - chr1_2:11153089-11153108 Msa0055840:intron 25.0%
! TGAGTATCATAAAATGAAGT+TGG - chr1_2:11153709-11153728 Msa0055840:intron 25.0%
! AGATGTAAGCACATAATATA+TGG - chr1_2:11153978-11153997 Msa0055840:intron 25.0%
! CAACATATATGATTATAGCT+AGG + chr1_2:11154335-11154354 None:intergenic 25.0%
! TCCATACAATTATCTTTCAT+TGG - chr1_2:11154591-11154610 Msa0055840:intron 25.0%
! TCCAATGAAAGATAATTGTA+TGG + chr1_2:11154595-11154614 None:intergenic 25.0%
! TGGAAATTAGTTCATGAATT+TGG - chr1_2:11154611-11154630 Msa0055840:intron 25.0%
!! TCCAATGAAAGATGATTTTA+GGG + chr1_2:11154760-11154779 None:intergenic 25.0%
!! TTCCAATGAAAGATGATTTT+AGG + chr1_2:11154761-11154780 None:intergenic 25.0%
! TGAAAAATAAGTCTGCTTAA+AGG - chr1_2:11154892-11154911 Msa0055840:intron 25.0%
! ACAAAGTACATAAAGATATG+CGG - chr1_2:11154939-11154958 Msa0055840:intron 25.0%
! TAAGACATAAATCTTAAAGG+GGG - chr1_2:11155058-11155077 Msa0055840:intron 25.0%
!!! AATTTGGGATGACTAATTTT+TGG + chr1_2:11155356-11155375 None:intergenic 25.0%
!!! AAAATAACAGCTTTTAAGGA+AGG - chr1_2:11156253-11156272 Msa0055840:intron 25.0%
! ACACTAACAACTACTAAATT+AGG - chr1_2:11156556-11156575 Msa0055840:intron 25.0%
!! TAATTGGTTTCTATTTGTCT+TGG - chr1_2:11156598-11156617 Msa0055840:intron 25.0%
!! TTTGGCAGTATTCTTAATTT+TGG - chr1_2:11156746-11156765 Msa0055840:intron 25.0%
!! TTGGCAGTATTCTTAATTTT+GGG - chr1_2:11156747-11156766 Msa0055840:intron 25.0%
!! AACAGGTATTCTTATTTACT+TGG - chr1_2:11156857-11156876 Msa0055840:intron 25.0%
! ATTTGTGGATGTTCAAATTA+AGG + chr1_2:11156887-11156906 None:intergenic 25.0%
!!! TTTTTTATTAGCATTACGGA+GGG + chr1_2:11156941-11156960 None:intergenic 25.0%
!!! TTTTTTTATTAGCATTACGG+AGG + chr1_2:11156942-11156961 None:intergenic 25.0%
! GTATCAACTACAATGATATA+TGG - chr1_2:11157332-11157351 Msa0055840:intron 25.0%
!! GAAAAAGGAATTTTATTCCT+AGG + chr1_2:11157522-11157541 None:intergenic 25.0%
! AGATATCTGCATCATTTAAA+AGG + chr1_2:11157646-11157665 None:intergenic 25.0%
! TAACAAATTGCATCATTATG+AGG - chr1_2:11157740-11157759 Msa0055840:intron 25.0%
! AACAAATTGCATCATTATGA+GGG - chr1_2:11157741-11157760 Msa0055840:intron 25.0%
!! AAAAGGGAGAAATTTTGTAT+TGG + chr1_2:11157939-11157958 None:intergenic 25.0%
!! AATACAAAATTTCTCCCTTT+TGG - chr1_2:11157938-11157957 Msa0055840:five_prime_UTR 25.0%
! ACATGTTAAAGATTCCAAAA+GGG + chr1_2:11157955-11157974 None:intergenic 25.0%
!! TCCAAATGAGAAACTATTTT+GGG + chr1_2:11158105-11158124 None:intergenic 25.0%
!!! TTAGCTTTATCCTGATTTTA+GGG - chr1_2:11158148-11158167 Msa0055840:five_prime_UTR 25.0%
! AAAATTGTACAAGAACCATA+TGG + chr1_2:11158201-11158220 None:intergenic 25.0%
!!! TACTTTACTTTTTATTGCCT+TGG - chr1_2:11158281-11158300 Msa0055840:five_prime_UTR 25.0%
! ACCGATATAATAACTATTAC+AGG + chr1_2:11158671-11158690 None:intergenic 25.0%
!!! ATAACTGCTTTTTAAATTGC+TGG - chr1_2:11158751-11158770 Msa0055840:five_prime_UTR 25.0%
! CAAGAATAAAGACAATATTC+AGG + chr1_2:11158951-11158970 None:intergenic 25.0%
!!! ATTTTGTTTTGATATAGCTC+AGG + chr1_2:11159081-11159100 None:intergenic 25.0%
! TGAGCTATATCAAAACAAAA+TGG - chr1_2:11159080-11159099 Msa0055840:five_prime_UTR 25.0%
! ACATGACACTAATTATGTAT+TGG - chr1_2:11159592-11159611 Msa0055840:five_prime_UTR 25.0%
!!! TGATTGTTCAGTTTGATTTT+AGG - chr1_2:11159748-11159767 Msa0055840:five_prime_UTR 25.0%
TTGTGATAGGTAATGTAGTT+TGG - chr1_2:11150887-11150906 Msa0055840:CDS 30.0%
! TGAAATTTACCTGTTTGTTG+AGG - chr1_2:11151007-11151026 Msa0055840:intron 30.0%
AAACAAAAACCTCAACAAAC+AGG + chr1_2:11151019-11151038 None:intergenic 30.0%
CATATCATGTTATGTTTAGG+AGG - chr1_2:11151074-11151093 Msa0055840:intron 30.0%
TAACACGATTCATTGCTATA+AGG - chr1_2:11151203-11151222 Msa0055840:intron 30.0%
AACACGATTCATTGCTATAA+GGG - chr1_2:11151204-11151223 Msa0055840:intron 30.0%
GAGTTCAATATGATTCAACT+GGG + chr1_2:11151564-11151583 None:intergenic 30.0%
TGAGTTCAATATGATTCAAC+TGG + chr1_2:11151565-11151584 None:intergenic 30.0%
GTTGAATCATATTGAACTCA+TGG - chr1_2:11151565-11151584 Msa0055840:CDS 30.0%
ATGTCTTCGTATCACAATTA+CGG + chr1_2:11151615-11151634 None:intergenic 30.0%
TTACATAGATGATTGACCTT+AGG - chr1_2:11151769-11151788 Msa0055840:intron 30.0%
TACATAGATGATTGACCTTA+GGG - chr1_2:11151770-11151789 Msa0055840:intron 30.0%
! AAATTTTTATGGGAGACTCA+AGG - chr1_2:11151820-11151839 Msa0055840:intron 30.0%
! AATTTTTATGGGAGACTCAA+GGG - chr1_2:11151821-11151840 Msa0055840:intron 30.0%
!! TATGAGTCTGTAATTTTTGG+AGG - chr1_2:11151946-11151965 Msa0055840:intron 30.0%
!! ATGAGTCTGTAATTTTTGGA+GGG - chr1_2:11151947-11151966 Msa0055840:intron 30.0%
GTCCGACAAATAAAAACAAA+TGG + chr1_2:11152248-11152267 None:intergenic 30.0%
AAGAATCCTTATGTCATAGA+AGG + chr1_2:11152391-11152410 None:intergenic 30.0%
AGAACAAAATCCAACTATAG+TGG + chr1_2:11152733-11152752 None:intergenic 30.0%
! ACTATAGTTGGATTTTGTTC+TGG - chr1_2:11152732-11152751 Msa0055840:intron 30.0%
! CTATAGTTGGATTTTGTTCT+GGG - chr1_2:11152733-11152752 Msa0055840:intron 30.0%
ACATATTACAATGTAGCAGT+GGG + chr1_2:11152825-11152844 None:intergenic 30.0%
! TTTGTGTTGCTGATTACAAT+TGG - chr1_2:11152920-11152939 Msa0055840:intron 30.0%
TTATCCTCCAAAATCAAATC+CGG - chr1_2:11153204-11153223 Msa0055840:intron 30.0%
! ATCAAGTACATATGATTTGC+AGG - chr1_2:11153246-11153265 Msa0055840:intron 30.0%
TCAAAAATCTCATTGCAACA+GGG + chr1_2:11153420-11153439 None:intergenic 30.0%
ATCAAAAATCTCATTGCAAC+AGG + chr1_2:11153421-11153440 None:intergenic 30.0%
CACATAAAACCAATGAATGA+TGG + chr1_2:11153596-11153615 None:intergenic 30.0%
!!! CATCATTCATTGGTTTTATG+TGG - chr1_2:11153594-11153613 Msa0055840:CDS 30.0%
AAATTAACCAAGTGAATGCA+TGG - chr1_2:11153915-11153934 Msa0055840:intron 30.0%
AAGCACATAATATATGGCAT+AGG - chr1_2:11153984-11154003 Msa0055840:intron 30.0%
ACTTCAATTATTTCGGTCTT+CGG - chr1_2:11154450-11154469 Msa0055840:intron 30.0%
AATTGTATGGATAGATTGCA+AGG + chr1_2:11154582-11154601 None:intergenic 30.0%
GAAATTTGATTGCACATGTT+TGG - chr1_2:11154659-11154678 Msa0055840:intron 30.0%
!! GATTTTAGGGATAAATTGCA+AGG + chr1_2:11154747-11154766 None:intergenic 30.0%
TCCCTAAAATCATCTTTCAT+TGG - chr1_2:11154756-11154775 Msa0055840:intron 30.0%
TAATCATTACGAAATGACAG+TGG - chr1_2:11154856-11154875 Msa0055840:intron 30.0%
GAAACAACAAAACAACAACA+AGG - chr1_2:11154978-11154997 Msa0055840:intron 30.0%
AAATTAGTCATCCCAAATTG+TGG - chr1_2:11155357-11155376 Msa0055840:intron 30.0%
TCAAAAAACAGGAAGACAAA+AGG + chr1_2:11155599-11155618 None:intergenic 30.0%
!! CAAGAGGGGTATTTATTATT+TGG - chr1_2:11156039-11156058 Msa0055840:intron 30.0%
GCTCTTAAGGAAAATATACA+CGG - chr1_2:11156140-11156159 Msa0055840:intron 30.0%
! AAGGTATACACCATTTGTTA+AGG - chr1_2:11156272-11156291 Msa0055840:intron 30.0%
! TATACACCATTTGTTAAGGT+CGG - chr1_2:11156276-11156295 Msa0055840:intron 30.0%
CAGAATATGTTGTCAAATAG+CGG + chr1_2:11156468-11156487 None:intergenic 30.0%
! TTGTTAGTGTTGTTAAGTAG+CGG + chr1_2:11156546-11156565 None:intergenic 30.0%
TATTTGTCTTGGCATTGTTA+AGG - chr1_2:11156609-11156628 Msa0055840:intron 30.0%
GATGAAAATCGGAAAAACAA+AGG + chr1_2:11156639-11156658 None:intergenic 30.0%
GATCACTTCATGATGAAAAT+CGG + chr1_2:11156650-11156669 None:intergenic 30.0%
! TCACTTTCACTTTAGAAGTA+TGG - chr1_2:11156690-11156709 Msa0055840:intron 30.0%
! TGGCAGTATTCTTAATTTTG+GGG - chr1_2:11156748-11156767 Msa0055840:intron 30.0%
ATAAGAATACCTGTTTGACT+TGG + chr1_2:11156852-11156871 None:intergenic 30.0%
GGAAAAGGTTCAAAAATTTG+TGG + chr1_2:11156902-11156921 None:intergenic 30.0%
ATAAAGGTCGATGTATCTAT+CGG - chr1_2:11157076-11157095 Msa0055840:intron 30.0%
TTGTTAAGCTTATTACTGTC+AGG - chr1_2:11157206-11157225 Msa0055840:CDS 30.0%
! TCCTTTTTCTTTTGATGTTG+TGG - chr1_2:11157533-11157552 Msa0055840:intron 30.0%
ACCACAACATCAAAAGAAAA+AGG + chr1_2:11157537-11157556 None:intergenic 30.0%
TTTGTTAACAAATGCCCTTA+GGG + chr1_2:11157849-11157868 None:intergenic 30.0%
CACATGTTAAAGATTCCAAA+AGG + chr1_2:11157956-11157975 None:intergenic 30.0%
AGGATTCCAAAAAGAGAAAA+GGG + chr1_2:11158003-11158022 None:intergenic 30.0%
AAGGATTCCAAAAAGAGAAA+AGG + chr1_2:11158004-11158023 None:intergenic 30.0%
!! AAATGAGAAACTATTTTGGG+TGG + chr1_2:11158102-11158121 None:intergenic 30.0%
ACCCAAAATAGTTTCTCATT+TGG - chr1_2:11158101-11158120 Msa0055840:five_prime_UTR 30.0%
! GTCCAAATGAGAAACTATTT+TGG + chr1_2:11158106-11158125 None:intergenic 30.0%
!!! CTTAGCTTTATCCTGATTTT+AGG - chr1_2:11158147-11158166 Msa0055840:five_prime_UTR 30.0%
AATGAAAATGCAATGCCATA+TGG - chr1_2:11158183-11158202 Msa0055840:five_prime_UTR 30.0%
TTCTTCCATTGTAATAAGTG+TGG - chr1_2:11158371-11158390 Msa0055840:five_prime_UTR 30.0%
ACTTACCACACTTATTACAA+TGG + chr1_2:11158379-11158398 None:intergenic 30.0%
AAGAACTAAGCAAAAAACAC+AGG + chr1_2:11158417-11158436 None:intergenic 30.0%
TAGTTCTTTAAGTAGCAATG+CGG - chr1_2:11158429-11158448 Msa0055840:five_prime_UTR 30.0%
TAGTACTTATTTGACATCCA+TGG - chr1_2:11158465-11158484 Msa0055840:five_prime_UTR 30.0%
!!! TTGACATCCATGGTTTTTTT+TGG - chr1_2:11158475-11158494 Msa0055840:five_prime_UTR 30.0%
ATGTTACCTCAAAACAAACA+GGG + chr1_2:11158573-11158592 None:intergenic 30.0%
AATGTTACCTCAAAACAAAC+AGG + chr1_2:11158574-11158593 None:intergenic 30.0%
GGTAACATTTACAACTTTCA+TGG - chr1_2:11158585-11158604 Msa0055840:five_prime_UTR 30.0%
AATACTGCATTCATCAATGT+TGG + chr1_2:11158795-11158814 None:intergenic 30.0%
! TTTCATTCAGACAGCTTTTA+TGG + chr1_2:11158867-11158886 None:intergenic 30.0%
GATGAAGAAAAAAGTAGACT+TGG + chr1_2:11158924-11158943 None:intergenic 30.0%
!!! TCCGTTGGTTTCTTAATTTT+TGG - chr1_2:11159222-11159241 Msa0055840:five_prime_UTR 30.0%
GCCAAAAATTAAGAAACCAA+CGG + chr1_2:11159226-11159245 None:intergenic 30.0%
!!! AGACTTGCGGTTTATTTTAT+TGG - chr1_2:11159411-11159430 Msa0055840:five_prime_UTR 30.0%
TTATTGGCATCTTAAATCCA+AGG - chr1_2:11159427-11159446 Msa0055840:five_prime_UTR 30.0%
!! TATGTATTGGTTCAACGAAA+TGG - chr1_2:11159605-11159624 Msa0055840:five_prime_UTR 30.0%
!! TTTATTTGTTATGAAGGCAG+TGG - chr1_2:11159648-11159667 Msa0055840:five_prime_UTR 30.0%
!! TGTTCAGTTTGATTTTAGGT+TGG - chr1_2:11159752-11159771 Msa0055840:five_prime_UTR 30.0%
!!! GTTCAGTTTGATTTTAGGTT+GGG - chr1_2:11159753-11159772 Msa0055840:five_prime_UTR 30.0%
!!! TTCAGTTTGATTTTAGGTTG+GGG - chr1_2:11159754-11159773 Msa0055840:five_prime_UTR 30.0%
! AGAAAATGAATGAAAGCACA+AGG + chr1_2:11159941-11159960 None:intergenic 30.0%
GAAGAATAAGCGATTATGAG+AGG + chr1_2:11150584-11150603 None:intergenic 35.0%
!!! CAAGGAAAAGCACTTTTCTA+CGG + chr1_2:11150643-11150662 None:intergenic 35.0%
! AAGTGCTTTTCCTTGAAGAT+TGG - chr1_2:11150648-11150667 Msa0055840:three_prime_UTR 35.0%
TTTCGAATCTCCAATCTTCA+AGG + chr1_2:11150661-11150680 None:intergenic 35.0%
AGTTTCAGCTTCTTTGGATT+CGG - chr1_2:11150859-11150878 Msa0055840:CDS 35.0%
! ACACCTTTGATTAGAAGTGT+CGG - chr1_2:11151173-11151192 Msa0055840:intron 35.0%
!! ATTGCTATAAGGGTATCAAG+AGG - chr1_2:11151214-11151233 Msa0055840:intron 35.0%
TTGTCTTTAGTAGTGATCCA+TGG - chr1_2:11151260-11151279 Msa0055840:intron 35.0%
TTAAGTTTCTCACCCCATAT+GGG + chr1_2:11151368-11151387 None:intergenic 35.0%
ATTAAGTTTCTCACCCCATA+TGG + chr1_2:11151369-11151388 None:intergenic 35.0%
TGAATAGTCTCACAAGTGTT+TGG - chr1_2:11151505-11151524 Msa0055840:intron 35.0%
GAATAGTCTCACAAGTGTTT+GGG - chr1_2:11151506-11151525 Msa0055840:intron 35.0%
CTTAAGTAAGCTAGTTCAAC+TGG - chr1_2:11151533-11151552 Msa0055840:intron 35.0%
!!! CTCATGGTTTTGAATTGTTG+TGG - chr1_2:11151581-11151600 Msa0055840:CDS 35.0%
CAGAATTCTTGCAAAAACTG+CGG + chr1_2:11151663-11151682 None:intergenic 35.0%
TTTACAACACAAACCACTAG+AGG + chr1_2:11151718-11151737 None:intergenic 35.0%
AGGTCAATCATCTATGTAAC+TGG + chr1_2:11151768-11151787 None:intergenic 35.0%
AGCATAAGCATTCTACAACT+GGG + chr1_2:11151919-11151938 None:intergenic 35.0%
!!! TTTTTTTTGCTTCCTGCAGT+TGG + chr1_2:11152023-11152042 None:intergenic 35.0%
! CAAAATTGGCTTCAAACTCT+TGG + chr1_2:11152167-11152186 None:intergenic 35.0%
!!! GAAGCCAATTTTGAAGTTGT+TGG - chr1_2:11152174-11152193 Msa0055840:intron 35.0%
AGCTCCAACAACTTCAAAAT+TGG + chr1_2:11152181-11152200 None:intergenic 35.0%
AAAAAGCAGGAAGCAAAAAC+CGG + chr1_2:11152338-11152357 None:intergenic 35.0%
!!! TTCCTGCTTTTTCTCTACAT+TGG - chr1_2:11152346-11152365 Msa0055840:intron 35.0%
TTCCAATGTAGAGAAAAAGC+AGG + chr1_2:11152351-11152370 None:intergenic 35.0%
TGCAAACCTTCTATGACATA+AGG - chr1_2:11152382-11152401 Msa0055840:intron 35.0%
! TGTCCCAAGTAATTTTACCA+TGG - chr1_2:11152506-11152525 Msa0055840:intron 35.0%
GCACCATGGTAAAATTACTT+GGG + chr1_2:11152512-11152531 None:intergenic 35.0%
TGCACCATGGTAAAATTACT+TGG + chr1_2:11152513-11152532 None:intergenic 35.0%
! GGTTGAAGTTTCTATTGGTT+TGG - chr1_2:11152706-11152725 Msa0055840:intron 35.0%
CTAATTGTATTTACTGCCGA+AGG - chr1_2:11152788-11152807 Msa0055840:intron 35.0%
CATATTACAATGTAGCAGTG+GGG + chr1_2:11152824-11152843 None:intergenic 35.0%
CACATATTACAATGTAGCAG+TGG + chr1_2:11152826-11152845 None:intergenic 35.0%
CACTGCTACATTGTAATATG+TGG - chr1_2:11152824-11152843 Msa0055840:intron 35.0%
CAAGAAATCAACAATGCGTT+TGG - chr1_2:11152957-11152976 Msa0055840:CDS 35.0%
! CTAAATTTGTTCGTACATGC+AGG - chr1_2:11153038-11153057 Msa0055840:intron 35.0%
AGAAATAGGCAGTAAGCTTA+AGG + chr1_2:11153065-11153084 None:intergenic 35.0%
! TTTGAGGATAGCTTGTATCA+TGG - chr1_2:11153105-11153124 Msa0055840:intron 35.0%
! TTGAGGATAGCTTGTATCAT+GGG - chr1_2:11153106-11153125 Msa0055840:intron 35.0%
TCATTGCATTCAAATTGCAG+AGG + chr1_2:11153157-11153176 None:intergenic 35.0%
AAGAAACATATGACCGAAGA+AGG - chr1_2:11153178-11153197 Msa0055840:intron 35.0%
!! AAGGATTCCGGATTTGATTT+TGG + chr1_2:11153214-11153233 None:intergenic 35.0%
TATGTACTTGATTCTTCTCC+AGG + chr1_2:11153238-11153257 None:intergenic 35.0%
! TACATATGATTTGCAGGAGA+AGG - chr1_2:11153252-11153271 Msa0055840:intron 35.0%
! ACATATGATTTGCAGGAGAA+GGG - chr1_2:11153253-11153272 Msa0055840:intron 35.0%
AGAAGGGATATATGGAACAT+GGG - chr1_2:11153269-11153288 Msa0055840:intron 35.0%
AAAAATCTCATTGCAACAGG+GGG + chr1_2:11153418-11153437 None:intergenic 35.0%
CAAAAATCTCATTGCAACAG+GGG + chr1_2:11153419-11153438 None:intergenic 35.0%
! ATGAATGATGGTGACAATTG+AGG + chr1_2:11153584-11153603 None:intergenic 35.0%
CAATTGTCACCATCATTCAT+TGG - chr1_2:11153584-11153603 Msa0055840:CDS 35.0%
TAGTTCAAGACTCGTATACA+TGG + chr1_2:11154046-11154065 None:intergenic 35.0%
CAACTCATGTGAGAATGAAA+CGG - chr1_2:11154264-11154283 Msa0055840:intron 35.0%
GGTATTCTCTTTGACTATTG+TGG + chr1_2:11154494-11154513 None:intergenic 35.0%
TAGTCAAAGAGAATACCACA+AGG - chr1_2:11154497-11154516 Msa0055840:intron 35.0%
! AAAGTATCACTTTCACCTTG+TGG + chr1_2:11154515-11154534 None:intergenic 35.0%
! GAAATTTGCTTGCACATGTT+TGG - chr1_2:11154824-11154843 Msa0055840:intron 35.0%
! GACATGACATCATGTTTTCA+TGG + chr1_2:11155021-11155040 None:intergenic 35.0%
TTATTATCTCGTGATCCTAC+TGG + chr1_2:11155186-11155205 None:intergenic 35.0%
GTAGGATCACGAGATAATAA+TGG - chr1_2:11155186-11155205 Msa0055840:intron 35.0%
AGCTAATCAAACTCTTCGAT+TGG + chr1_2:11155262-11155281 None:intergenic 35.0%
TCCACAAAAGTCAAACACTT+CGG + chr1_2:11155304-11155323 None:intergenic 35.0%
!! GTGTTTGACTTTTGTGGAAT+TGG - chr1_2:11155306-11155325 Msa0055840:intron 35.0%
!!! ATGACTAATTTTTGGCGTGT+AGG + chr1_2:11155348-11155367 None:intergenic 35.0%
AAGTTAGCACTACGGAAATT+TGG - chr1_2:11155486-11155505 Msa0055840:intron 35.0%
AAATTTGGATGCCCTTGATA+GGG - chr1_2:11155501-11155520 Msa0055840:intron 35.0%
TAGGACTTGAAAATGGATGA+GGG - chr1_2:11155526-11155545 Msa0055840:intron 35.0%
AAGAGATAGATTTACTCCGA+AGG + chr1_2:11155575-11155594 None:intergenic 35.0%
CAGGAAATTCTCTACTTATC+AGG + chr1_2:11155664-11155683 None:intergenic 35.0%
ACTGTGAAAACAAACTTGTG+TGG - chr1_2:11156002-11156021 Msa0055840:intron 35.0%
!! GTTTCATGATTTGCTCAAGA+GGG - chr1_2:11156024-11156043 Msa0055840:intron 35.0%
!! TTTCATGATTTGCTCAAGAG+GGG - chr1_2:11156025-11156044 Msa0055840:intron 35.0%
TCCTTGTATAGCACATTCAA+CGG + chr1_2:11156072-11156091 None:intergenic 35.0%
TTCTGCTAAATAGCACATTG+TGG - chr1_2:11156483-11156502 Msa0055840:intron 35.0%
TTAAGCTTATTACTGTCAGG+AGG - chr1_2:11157209-11157228 Msa0055840:CDS 35.0%
AGCATAAGATCTATTGCTCT+AGG + chr1_2:11157268-11157287 None:intergenic 35.0%
CAGCAAAATTGCGTTAATTG+TGG - chr1_2:11157432-11157451 Msa0055840:intron 35.0%
GTTAATTGTGGTGTTTGCAT+GGG - chr1_2:11157444-11157463 Msa0055840:intron 35.0%
!! ATGATGTGAGTATTGATCCT+AGG - chr1_2:11157502-11157521 Msa0055840:intron 35.0%
AAATTCCACAGCCATTACAA+TGG + chr1_2:11157680-11157699 None:intergenic 35.0%
AATTGCATCATTATGAGGGA+TGG - chr1_2:11157745-11157764 Msa0055840:intron 35.0%
! GTTTGTTAACAAATGCCCTT+AGG + chr1_2:11157850-11157869 None:intergenic 35.0%
AATCTTTAACATGTGCCCTT+AGG - chr1_2:11157961-11157980 Msa0055840:five_prime_UTR 35.0%
ATCTTTAACATGTGCCCTTA+GGG - chr1_2:11157962-11157981 Msa0055840:five_prime_UTR 35.0%
! GCAATACCCTTTTCTCTTTT+TGG - chr1_2:11157994-11158013 Msa0055840:five_prime_UTR 35.0%
AATCCTTAACATGCAACCTT+AGG - chr1_2:11158017-11158036 Msa0055840:five_prime_UTR 35.0%
ATCCTTAACATGCAACCTTA+GGG - chr1_2:11158018-11158037 Msa0055840:five_prime_UTR 35.0%
!! TCCTGATTTTAGGGATCTTT+TGG - chr1_2:11158157-11158176 Msa0055840:five_prime_UTR 35.0%
TCCAAAAGATCCCTAAAATC+AGG + chr1_2:11158161-11158180 None:intergenic 35.0%
!! GTTATATTTTTGCGCAGAAC+TGG - chr1_2:11158335-11158354 Msa0055840:five_prime_UTR 35.0%
!!! TCCATGGTTTTTTTTGGCAT+AGG - chr1_2:11158481-11158500 Msa0055840:five_prime_UTR 35.0%
ACCTATGCCAAAAAAAACCA+TGG + chr1_2:11158485-11158504 None:intergenic 35.0%
TCTGTGATATGTCAAAGGTT+TGG - chr1_2:11159019-11159038 Msa0055840:five_prime_UTR 35.0%
CTGTGATATGTCAAAGGTTT+GGG - chr1_2:11159020-11159039 Msa0055840:five_prime_UTR 35.0%
! TTTTGATATAGCTCAGGCAT+TGG + chr1_2:11159075-11159094 None:intergenic 35.0%
GTGTAAACAACCATCAGATA+GGG + chr1_2:11159123-11159142 None:intergenic 35.0%
AGTGTAAACAACCATCAGAT+AGG + chr1_2:11159124-11159143 None:intergenic 35.0%
TATAATACGTGTTTGTGCCA+AGG - chr1_2:11159286-11159305 Msa0055840:five_prime_UTR 35.0%
TATGGTGATCGATGAAATAG+TGG - chr1_2:11159336-11159355 Msa0055840:five_prime_UTR 35.0%
GATAACACTATTAGTGTCCT+TGG + chr1_2:11159447-11159466 None:intergenic 35.0%
TAGTGTTATCCTTTACATGC+AGG - chr1_2:11159457-11159476 Msa0055840:five_prime_UTR 35.0%
TTATCCTTTACATGCAGGTT+TGG - chr1_2:11159462-11159481 Msa0055840:five_prime_UTR 35.0%
! TTTTTCCACAATCATTGCAC+AGG + chr1_2:11159490-11159509 None:intergenic 35.0%
AAAATGGAAACGGACATTAG+AGG + chr1_2:11159513-11159532 None:intergenic 35.0%
TTTGCGCTACAAAATGGAAA+CGG + chr1_2:11159523-11159542 None:intergenic 35.0%
TTGCGAAGTGATATTCGAGA+GGG + chr1_2:11150548-11150567 None:intergenic 40.0%
GAACTTTCAACTCTTCACGA+CGG + chr1_2:11150713-11150732 None:intergenic 40.0%
TCTGTCAGTTTCAGCTTCTT+TGG - chr1_2:11150853-11150872 Msa0055840:exon 40.0%
!! TTATGTTTAGGAGGCGTTTG+AGG - chr1_2:11151083-11151102 Msa0055840:intron 40.0%
!! TATGTTTAGGAGGCGTTTGA+GGG - chr1_2:11151084-11151103 Msa0055840:intron 40.0%
TCACCGACACTTCTAATCAA+AGG + chr1_2:11151179-11151198 None:intergenic 40.0%
!! ATAAGGGTATCAAGAGGTCT+TGG - chr1_2:11151220-11151239 Msa0055840:intron 40.0%
CAAGCTAATCAATGACACCA+TGG + chr1_2:11151280-11151299 None:intergenic 40.0%
TAAGCCCTTACCATGATAAG+CGG - chr1_2:11151389-11151408 Msa0055840:CDS 40.0%
ACAACCGCTTATCATGGTAA+GGG + chr1_2:11151396-11151415 None:intergenic 40.0%
TATAGGACAACCGCTTATCA+TGG + chr1_2:11151402-11151421 None:intergenic 40.0%
TAGGTAGAGAAGTCTTTCAC+AGG - chr1_2:11151872-11151891 Msa0055840:CDS 40.0%
AGGTAGAGAAGTCTTTCACA+GGG - chr1_2:11151873-11151892 Msa0055840:CDS 40.0%
CAGCATAAGCATTCTACAAC+TGG + chr1_2:11151920-11151939 None:intergenic 40.0%
!! ACAAAATTGCTGGTGCTGTT+TGG + chr1_2:11151981-11152000 None:intergenic 40.0%
CAACTGCAGAAATACAGATG+GGG + chr1_2:11152072-11152091 None:intergenic 40.0%
GCAACTGCAGAAATACAGAT+GGG + chr1_2:11152073-11152092 None:intergenic 40.0%
TGCAACTGCAGAAATACAGA+TGG + chr1_2:11152074-11152093 None:intergenic 40.0%
!! CTGTCTTATTTCGTCAAGCT+TGG - chr1_2:11152140-11152159 Msa0055840:intron 40.0%
AAGTTGTTGGAGCTTCGTAT+GGG - chr1_2:11152187-11152206 Msa0055840:intron 40.0%
TTTATTTGTCGGACAGCAAG+AGG - chr1_2:11152254-11152273 Msa0055840:intron 40.0%
!! GAATGGCTTTGATGCTAGTT+TGG - chr1_2:11152276-11152295 Msa0055840:intron 40.0%
TGAACATTCGCACTACTTCA+GGG + chr1_2:11152424-11152443 None:intergenic 40.0%
TTGAACATTCGCACTACTTC+AGG + chr1_2:11152425-11152444 None:intergenic 40.0%
TTACCATGGTGCAGACTATA+TGG - chr1_2:11152520-11152539 Msa0055840:intron 40.0%
! TTTTGGTAAGTTTCGGTCTC+TGG - chr1_2:11152560-11152579 Msa0055840:intron 40.0%
! CAACGCTGAACTGCATTTTA+AGG - chr1_2:11152589-11152608 Msa0055840:intron 40.0%
!!! GCTGAACTGCATTTTAAGGT+AGG - chr1_2:11152593-11152612 Msa0055840:intron 40.0%
!! TTGGTTTGGTCCACTATAGT+TGG - chr1_2:11152720-11152739 Msa0055840:intron 40.0%
!! TTTGTTCTGGGAGTTCTTCA+AGG - chr1_2:11152745-11152764 Msa0055840:CDS 40.0%
GAGTTCTTCAAGGAATCAAG+TGG - chr1_2:11152755-11152774 Msa0055840:CDS 40.0%
! TCTTGTTGTGTTCCTCTCTT+GGG - chr1_2:11152867-11152886 Msa0055840:intron 40.0%
!! GATTCCGGATTTGATTTTGG+AGG + chr1_2:11153211-11153230 None:intergenic 40.0%
TTTGCAGGAGAAGGGATATA+TGG - chr1_2:11153261-11153280 Msa0055840:intron 40.0%
GAGAAGGGATATATGGAACA+TGG - chr1_2:11153268-11153287 Msa0055840:intron 40.0%
! CTTTTGCCTCATTGTGACAA+TGG + chr1_2:11153449-11153468 None:intergenic 40.0%
GTGACAATTGAGGAAAGGAT+TGG + chr1_2:11153574-11153593 None:intergenic 40.0%
! TGATGGTGACAATTGAGGAA+AGG + chr1_2:11153579-11153598 None:intergenic 40.0%
CGTTTCATTCTCACATGAGT+TGG + chr1_2:11154266-11154285 None:intergenic 40.0%
ATTCAACTTGAGTTTCTCCG+AGG - chr1_2:11155083-11155102 Msa0055840:intron 40.0%
!! GGTGATTGAGTTGATGATGA+GGG - chr1_2:11155129-11155148 Msa0055840:intron 40.0%
! TACTGGAGAAGGCATAATTC+AGG + chr1_2:11155169-11155188 None:intergenic 40.0%
TGAATTATGCCTTCTCCAGT+AGG - chr1_2:11155168-11155187 Msa0055840:intron 40.0%
! AAAGTCAAACACTTCGGGTT+CGG + chr1_2:11155298-11155317 None:intergenic 40.0%
CCACAAAAGTCAAACACTTC+GGG + chr1_2:11155303-11155322 None:intergenic 40.0%
TGAACAATACCTTGCCTTCT+TGG + chr1_2:11155443-11155462 None:intergenic 40.0%
!! AAGGCAAGGTATTGTTCACA+TGG - chr1_2:11155445-11155464 Msa0055840:intron 40.0%
!! AGGCAAGGTATTGTTCACAT+GGG - chr1_2:11155446-11155465 Msa0055840:intron 40.0%
GAAATTTGGATGCCCTTGAT+AGG - chr1_2:11155500-11155519 Msa0055840:intron 40.0%
TAGGGAGTAGGACTTGAAAA+TGG - chr1_2:11155519-11155538 Msa0055840:intron 40.0%
GTAGGACTTGAAAATGGATG+AGG - chr1_2:11155525-11155544 Msa0055840:intron 40.0%
CTTGAAAATGGATGAGGGTA+TGG - chr1_2:11155531-11155550 Msa0055840:intron 40.0%
!!! CTTCCTGTTTTTTGAAGACC+CGG - chr1_2:11155604-11155623 Msa0055840:intron 40.0%
TTCTCTACTTATCAGGCTCT+TGG + chr1_2:11155657-11155676 None:intergenic 40.0%
ATCCTCAACATCTGATTCAG+AGG - chr1_2:11155827-11155846 Msa0055840:intron 40.0%
AACCTCTGAATCAGATGTTG+AGG + chr1_2:11155832-11155851 None:intergenic 40.0%
TCAACATCTGATTCAGAGGT+TGG - chr1_2:11155831-11155850 Msa0055840:intron 40.0%
AAATCAGAGAAGGAGCCAAA+GGG + chr1_2:11155864-11155883 None:intergenic 40.0%
AAAATCAGAGAAGGAGCCAA+AGG + chr1_2:11155865-11155884 None:intergenic 40.0%
!!! TCCTTCTCTGATTTTGACTC+TGG - chr1_2:11155870-11155889 Msa0055840:intron 40.0%
AAACCTCAAGCGCAAAATGA+TGG + chr1_2:11155907-11155926 None:intergenic 40.0%
AATTTCCATCGGAAATGCTG+GGG + chr1_2:11155934-11155953 None:intergenic 40.0%
GAATTTCCATCGGAAATGCT+GGG + chr1_2:11155935-11155954 None:intergenic 40.0%
AGAATTTCCATCGGAAATGC+TGG + chr1_2:11155936-11155955 None:intergenic 40.0%
ATGGCTGAGAGAATTTCCAT+CGG + chr1_2:11155945-11155964 None:intergenic 40.0%
!! GGTTTCATGATTTGCTCAAG+AGG - chr1_2:11156023-11156042 Msa0055840:intron 40.0%
ACCGTTGAATGTGCTATACA+AGG - chr1_2:11156068-11156087 Msa0055840:intron 40.0%
! AATCTAGAAGCGTGCTCTTA+AGG - chr1_2:11156127-11156146 Msa0055840:intron 40.0%
GTTTGACCGACCTTAACAAA+TGG + chr1_2:11156285-11156304 None:intergenic 40.0%
TTGTCAAATAGCGGCTATAG+GGG + chr1_2:11156459-11156478 None:intergenic 40.0%
GTTGTCAAATAGCGGCTATA+GGG + chr1_2:11156460-11156479 None:intergenic 40.0%
TGTTGTCAAATAGCGGCTAT+AGG + chr1_2:11156461-11156480 None:intergenic 40.0%
ATTGAGCACAGAACAGGAAA+AGG + chr1_2:11156917-11156936 None:intergenic 40.0%
CAGGTGATATGTTCACTTTG+TGG - chr1_2:11156973-11156992 Msa0055840:intron 40.0%
CGTTAATTGTGGTGTTTGCA+TGG - chr1_2:11157443-11157462 Msa0055840:intron 40.0%
AATTGCAGTTACAGACTCAC+TGG + chr1_2:11157600-11157619 None:intergenic 40.0%
AAGCAGCAGTACCATTGTAA+TGG - chr1_2:11157666-11157685 Msa0055840:intron 40.0%
! GCAGGTATGAATTGATAACC+TGG - chr1_2:11157700-11157719 Msa0055840:intron 40.0%
!!! GATAACCTGGTTTTGTAGTC+TGG - chr1_2:11157713-11157732 Msa0055840:intron 40.0%
ATGTTCCAGACTACAAAACC+AGG + chr1_2:11157721-11157740 None:intergenic 40.0%
GATGGCAACATGTTTCAACA+GGG - chr1_2:11157763-11157782 Msa0055840:intron 40.0%
ATGGCAACATGTTTCAACAG+GGG - chr1_2:11157764-11157783 Msa0055840:intron 40.0%
! ATTGCTAACTTGTGCCCTAA+GGG + chr1_2:11157979-11157998 None:intergenic 40.0%
! TATTGCTAACTTGTGCCCTA+AGG + chr1_2:11157980-11157999 None:intergenic 40.0%
!! GAAACTATTTTGGGTGGATG+TGG + chr1_2:11158096-11158115 None:intergenic 40.0%
!! GTGCTAGGCTAGTTTAGTTA+AGG + chr1_2:11158128-11158147 None:intergenic 40.0%
TCAGGATAAAGCTAAGTGCT+AGG + chr1_2:11158143-11158162 None:intergenic 40.0%
!! ATATTTTTGCGCAGAACTGG+CGG - chr1_2:11158338-11158357 Msa0055840:five_prime_UTR 40.0%
!!! TGATTGCCCTGTTTGTTTTG+AGG - chr1_2:11158564-11158583 Msa0055840:five_prime_UTR 40.0%
TTGCTGGAATCTGATTCATG+TGG - chr1_2:11158767-11158786 Msa0055840:five_prime_UTR 40.0%
! TTATGGATTGTATGTCCGCA+CGG + chr1_2:11158850-11158869 None:intergenic 40.0%
GTCAAAGGTTTGGGAGAAAT+TGG - chr1_2:11159029-11159048 Msa0055840:five_prime_UTR 40.0%
!!! TTTTTTCCCACCCTATCTGA+TGG - chr1_2:11159110-11159129 Msa0055840:five_prime_UTR 40.0%
AAACAACCATCAGATAGGGT+GGG + chr1_2:11159119-11159138 None:intergenic 40.0%
TAAACAACCATCAGATAGGG+TGG + chr1_2:11159120-11159139 None:intergenic 40.0%
TGCCTGTACGCATATGAATT+TGG - chr1_2:11159199-11159218 Msa0055840:five_prime_UTR 40.0%
GACCAAATTCATATGCGTAC+AGG + chr1_2:11159204-11159223 None:intergenic 40.0%
TTGTGCCAAGGATGTCTTAT+TGG - chr1_2:11159298-11159317 Msa0055840:five_prime_UTR 40.0%
TAGCACCAATAAGACATCCT+TGG + chr1_2:11159306-11159325 None:intergenic 40.0%
!! AGGATGTCTTATTGGTGCTA+TGG - chr1_2:11159306-11159325 Msa0055840:five_prime_UTR 40.0%
!! ATGTCTTATTGGTGCTATGG+AGG - chr1_2:11159309-11159328 Msa0055840:five_prime_UTR 40.0%
!! TGGTGCTATGGAGGTATATA+TGG - chr1_2:11159318-11159337 Msa0055840:five_prime_UTR 40.0%
! GGCATTTTTGCGCTACAAAA+TGG + chr1_2:11159529-11159548 None:intergenic 40.0%
TGTTGTAGGAATTGCAGTTG+AGG + chr1_2:11159550-11159569 None:intergenic 40.0%
! TCTTGTTTGTCGTGTGTTGT+AGG + chr1_2:11159564-11159583 None:intergenic 40.0%
TACAACACACGACAAACAAG+AGG - chr1_2:11159563-11159582 Msa0055840:five_prime_UTR 40.0%
TACTTGATGCTGTTCTCTCT+TGG - chr1_2:11159671-11159690 Msa0055840:five_prime_UTR 40.0%
!! AATCTGTCGTTTGGTGGATT+CGG - chr1_2:11159801-11159820 Msa0055840:five_prime_UTR 40.0%
GTTGCGAAGTGATATTCGAG+AGG + chr1_2:11150549-11150568 None:intergenic 45.0%
! GGATTCGGTTCTGTTGTGAT+AGG - chr1_2:11150874-11150893 Msa0055840:CDS 45.0%
ACATGAATCAGTGTCGTGTC+TGG + chr1_2:11151139-11151158 None:intergenic 45.0%
GGTATCAAGAGGTCTTGGTT+TGG - chr1_2:11151225-11151244 Msa0055840:intron 45.0%
!! ATCAAGAGGTCTTGGTTTGG+AGG - chr1_2:11151228-11151247 Msa0055840:intron 45.0%
GACAACCGCTTATCATGGTA+AGG + chr1_2:11151397-11151416 None:intergenic 45.0%
GACTCAACTGTTCCTATCAC+AGG - chr1_2:11151692-11151711 Msa0055840:intron 45.0%
ACTGGGTAGTAGTTCCACTT+CGG + chr1_2:11151902-11151921 None:intergenic 45.0%
TTTGATCCATCTCCAACTGC+AGG - chr1_2:11152008-11152027 Msa0055840:intron 45.0%
!! ATGGGGAAGGCATTAAAAGG+AGG + chr1_2:11152055-11152074 None:intergenic 45.0%
!! CAGATGGGGAAGGCATTAAA+AGG + chr1_2:11152058-11152077 None:intergenic 45.0%
TGCAGAAATACAGATGGGGA+AGG + chr1_2:11152068-11152087 None:intergenic 45.0%
CTTGACGAAATAAGACAGCG+TGG + chr1_2:11152138-11152157 None:intergenic 45.0%
GAAGTTGTTGGAGCTTCGTA+TGG - chr1_2:11152186-11152205 Msa0055840:intron 45.0%
CTAGTCTCTTGTATACACGC+CGG - chr1_2:11152316-11152335 Msa0055840:intron 45.0%
GTCATAGAAGGTTTGCAGCA+GGG + chr1_2:11152379-11152398 None:intergenic 45.0%
TGTCATAGAAGGTTTGCAGC+AGG + chr1_2:11152380-11152399 None:intergenic 45.0%
ACTCCATATAGTCTGCACCA+TGG + chr1_2:11152526-11152545 None:intergenic 45.0%
! GTCTTGTTGTGTTCCTCTCT+TGG - chr1_2:11152866-11152885 Msa0055840:intron 45.0%
! CTTGTTGTGTTCCTCTCTTG+GGG - chr1_2:11152868-11152887 Msa0055840:intron 45.0%
! TGCTGATTACAATTGGCCTG+CGG - chr1_2:11152927-11152946 Msa0055840:intron 45.0%
!! CAATGCGTTTGGTGTTTACC+TGG - chr1_2:11152968-11152987 Msa0055840:CDS 45.0%
! TTGGTGTTTACCTGGCTTGA+TGG - chr1_2:11152976-11152995 Msa0055840:CDS 45.0%
! TGGTGTTTACCTGGCTTGAT+GGG - chr1_2:11152977-11152996 Msa0055840:CDS 45.0%
TGGAGGATAAACGCCTTCTT+CGG + chr1_2:11153194-11153213 None:intergenic 45.0%
ACTTGATTCTTCTCCAGGCA+AGG + chr1_2:11153233-11153252 None:intergenic 45.0%
TTTGCAGATGCCAACACTAC+CGG - chr1_2:11153373-11153392 Msa0055840:intron 45.0%
TTGCCTCATTGTGACAATGG+CGG + chr1_2:11153446-11153465 None:intergenic 45.0%
CTCTCTGCGATTGAAAACAC+TGG + chr1_2:11153645-11153664 None:intergenic 45.0%
TTGGCATATGCATGCATGTG+TGG - chr1_2:11153728-11153747 Msa0055840:intron 45.0%
TGGCATATGCATGCATGTGT+GGG - chr1_2:11153729-11153748 Msa0055840:intron 45.0%
CTGACTTCCATGCATTCACT+TGG + chr1_2:11153925-11153944 None:intergenic 45.0%
! TTCTCCGAGGTTGATTGAGT+TGG - chr1_2:11155096-11155115 Msa0055840:intron 45.0%
GGAACCAACTCAATCAACCT+CGG + chr1_2:11155103-11155122 None:intergenic 45.0%
!! TGATTGAGTTGGTTCCTCTG+AGG - chr1_2:11155107-11155126 Msa0055840:intron 45.0%
!! GATTGAGTTGGTTCCTCTGA+GGG - chr1_2:11155108-11155127 Msa0055840:intron 45.0%
ATCAACTCAATCACCCTCAG+AGG + chr1_2:11155124-11155143 None:intergenic 45.0%
!! GGGTGATTGAGTTGATGATG+AGG - chr1_2:11155128-11155147 Msa0055840:intron 45.0%
!! AGTTGATGATGAGGGCACAT+TGG - chr1_2:11155137-11155156 Msa0055840:intron 45.0%
!! GTTGATGATGAGGGCACATT+GGG - chr1_2:11155138-11155157 Msa0055840:intron 45.0%
! CAAACTCTTCGATTGGCTGA+GGG + chr1_2:11155255-11155274 None:intergenic 45.0%
! TCAAACTCTTCGATTGGCTG+AGG + chr1_2:11155256-11155275 None:intergenic 45.0%
! AAGTCAAACACTTCGGGTTC+GGG + chr1_2:11155297-11155316 None:intergenic 45.0%
!! CCCGAAGTGTTTGACTTTTG+TGG - chr1_2:11155300-11155319 Msa0055840:intron 45.0%
AATACCTTGCCTTCTTGGCT+TGG + chr1_2:11155438-11155457 None:intergenic 45.0%
GGTTGTGCAAGTTAGCACTA+CGG - chr1_2:11155478-11155497 Msa0055840:intron 45.0%
CAAGTCCTACTCCCTATCAA+GGG + chr1_2:11155515-11155534 None:intergenic 45.0%
TCAAGTCCTACTCCCTATCA+AGG + chr1_2:11155516-11155535 None:intergenic 45.0%
GATTAGCAGCTACGATCCTT+CGG - chr1_2:11155556-11155575 Msa0055840:intron 45.0%
TGTCCGGGTCTTCAAAAAAC+AGG + chr1_2:11155610-11155629 None:intergenic 45.0%
AAAACGGTCATAAGCGTGTC+CGG + chr1_2:11155626-11155645 None:intergenic 45.0%
TCTACTTATCAGGCTCTTGG+AGG + chr1_2:11155654-11155673 None:intergenic 45.0%
!! TTTCCTGTCACAGTACTGAC+AGG - chr1_2:11155677-11155696 Msa0055840:intron 45.0%
!! TTCCTGTCACAGTACTGACA+GGG - chr1_2:11155678-11155697 Msa0055840:intron 45.0%
AATTCCTTCACGTCTTGCTC+CGG - chr1_2:11155702-11155721 Msa0055840:intron 45.0%
TGCTGCTGATGAACCTTTAC+CGG + chr1_2:11155724-11155743 None:intergenic 45.0%
!! GCATTCTGAGATGAACGTGA+AGG - chr1_2:11155741-11155760 Msa0055840:intron 45.0%
ACTTCCAAAGCCTTGGAGAA+GGG + chr1_2:11155771-11155790 None:intergenic 45.0%
!! TTCTCCAAGGCTTTGGAAGT+GGG - chr1_2:11155771-11155790 Msa0055840:intron 45.0%
!! TTGAGGATTTGCTGACCCTA+AGG + chr1_2:11155815-11155834 None:intergenic 45.0%
ACATCTGATTCAGAGGTTGG+TGG - chr1_2:11155834-11155853 Msa0055840:intron 45.0%
GCCAGAGTCAAAATCAGAGA+AGG + chr1_2:11155874-11155893 None:intergenic 45.0%
ACGCAAGAATTAGCCGTCAT+GGG + chr1_2:11156727-11156746 None:intergenic 45.0%
AACGCAAGAATTAGCCGTCA+TGG + chr1_2:11156728-11156747 None:intergenic 45.0%
TGACGGCTAATTCTTGCGTT+TGG - chr1_2:11156728-11156747 Msa0055840:intron 45.0%
! ACTTTGTGGCACTGAACAAG+AGG - chr1_2:11156987-11157006 Msa0055840:intron 45.0%
! AGGTTCTTCCAGGTGTTTTG+TGG - chr1_2:11157229-11157248 Msa0055840:CDS 45.0%
TCTCACAACCACAAAACACC+TGG + chr1_2:11157240-11157259 None:intergenic 45.0%
CAGTACCATTGTAATGGCTG+TGG - chr1_2:11157672-11157691 Msa0055840:intron 45.0%
GTAATGGCTGTGGAATTTGC+AGG - chr1_2:11157682-11157701 Msa0055840:intron 45.0%
GGATGGCAACATGTTTCAAC+AGG - chr1_2:11157762-11157781 Msa0055840:intron 45.0%
AAATGCTAACACGTGCCCTA+AGG - chr1_2:11157831-11157850 Msa0055840:intron 45.0%
AATGCTAACACGTGCCCTAA+GGG - chr1_2:11157832-11157851 Msa0055840:intron 45.0%
TGCCCTAAGGTTGCATGTTA+AGG + chr1_2:11158023-11158042 None:intergenic 45.0%
! TCTTGCTAACTTGTGCCCTA+AGG + chr1_2:11158036-11158055 None:intergenic 45.0%
! TGAGTTCTGACACAAAGCCA+AGG + chr1_2:11158301-11158320 None:intergenic 45.0%
GATGTCATTGTTATGCCGTG+CGG - chr1_2:11158832-11158851 Msa0055840:five_prime_UTR 45.0%
ATGCCCTCTCTGTTCAAAGT+CGG - chr1_2:11158996-11159015 Msa0055840:five_prime_UTR 45.0%
! AGACCGACTTTGAACAGAGA+GGG + chr1_2:11159002-11159021 None:intergenic 45.0%
GTCGGTCTGTGATATGTCAA+AGG - chr1_2:11159014-11159033 Msa0055840:five_prime_UTR 45.0%
GGTTTGGGAGAAATTGGACA+TGG - chr1_2:11159035-11159054 Msa0055840:five_prime_UTR 45.0%
TTACACTACGCGCATGCTTA+CGG - chr1_2:11159137-11159156 Msa0055840:five_prime_UTR 45.0%
CGCATATGAATTTGGTCCGT+TGG - chr1_2:11159207-11159226 Msa0055840:five_prime_UTR 45.0%
TTCTAGGTGCATACTGAAGG+AGG + chr1_2:11159387-11159406 None:intergenic 45.0%
TGCTTCTAGGTGCATACTGA+AGG + chr1_2:11159390-11159409 None:intergenic 45.0%
! CACCTAGAAGCATAGACTTG+CGG - chr1_2:11159398-11159417 Msa0055840:five_prime_UTR 45.0%
AACCGCAAGTCTATGCTTCT+AGG + chr1_2:11159403-11159422 None:intergenic 45.0%
GGATCCAAACCTGCATGTAA+AGG + chr1_2:11159469-11159488 None:intergenic 45.0%
TGGATCCTGTGCAATGATTG+TGG - chr1_2:11159482-11159501 Msa0055840:five_prime_UTR 45.0%
CTACAAGGATGCTGTACACT+TGG - chr1_2:11159694-11159713 Msa0055840:five_prime_UTR 45.0%
TTCAACGCGCTTAGACACAT+TGG - chr1_2:11159720-11159739 Msa0055840:five_prime_UTR 45.0%
!! TTAGGTTGGGGAGTAAGAGT+TGG - chr1_2:11159766-11159785 Msa0055840:five_prime_UTR 45.0%
AGCTGCTGTAATCTGTCGTT+TGG - chr1_2:11159792-11159811 Msa0055840:five_prime_UTR 45.0%
! TGCTGTAATCTGTCGTTTGG+TGG - chr1_2:11159795-11159814 Msa0055840:five_prime_UTR 45.0%
!! ATCTGTCGTTTGGTGGATTC+GGG - chr1_2:11159802-11159821 Msa0055840:five_prime_UTR 45.0%
!! CATATTATAAAAAATATATT+AGG + chr1_2:11153482-11153501 None:intergenic 5.0%
GTCGTGTCTGGTGTATGTGT+CGG + chr1_2:11151127-11151146 None:intergenic 50.0%
TTCCTATCACAGGCCTCTAG+TGG - chr1_2:11151702-11151721 Msa0055840:intron 50.0%
AACCACTAGAGGCCTGTGAT+AGG + chr1_2:11151707-11151726 None:intergenic 50.0%
TTGCTTCCTGCAGTTGGAGA+TGG + chr1_2:11152017-11152036 None:intergenic 50.0%
TTGTTGGAGCTTCGTATGGG+TGG - chr1_2:11152190-11152209 Msa0055840:intron 50.0%
TGTTGGAGCTTCGTATGGGT+GGG - chr1_2:11152191-11152210 Msa0055840:intron 50.0%
TTGTCGGACAGCAAGAGGAA+TGG - chr1_2:11152259-11152278 Msa0055840:intron 50.0%
TTCGCACTACTTCAGGGTCT+AGG + chr1_2:11152418-11152437 None:intergenic 50.0%
TGGTAAGTTTCGGTCTCTGG+AGG - chr1_2:11152563-11152582 Msa0055840:intron 50.0%
TAAGGTAGGTTCGCCCTTTG+TGG - chr1_2:11152607-11152626 Msa0055840:intron 50.0%
! GTGGGGTTTTTCACAGCCTT+CGG + chr1_2:11152807-11152826 None:intergenic 50.0%
GATTTCTTGCATACTGCCGC+AGG + chr1_2:11152946-11152965 None:intergenic 50.0%
! GGTGTTTACCTGGCTTGATG+GGG - chr1_2:11152978-11152997 Msa0055840:CDS 50.0%
TTTAGTCACCCCATCAAGCC+AGG + chr1_2:11152989-11153008 None:intergenic 50.0%
! GATAGCTTGTATCATGGGCG+AGG - chr1_2:11153111-11153130 Msa0055840:intron 50.0%
TCAAATCCGGAATCCTTGCC+TGG - chr1_2:11153217-11153236 Msa0055840:intron 50.0%
TCTTCTCCAGGCAAGGATTC+CGG + chr1_2:11153226-11153245 None:intergenic 50.0%
TTGCCGCCATTGTCACAATG+AGG - chr1_2:11153440-11153459 Msa0055840:intron 50.0%
TCTCGTGATCCTACTGGAGA+AGG + chr1_2:11155180-11155199 None:intergenic 50.0%
!! TCCCAAATTGTGGTGTTGCG+AGG - chr1_2:11155367-11155386 Msa0055840:intron 50.0%
CCCTCGCAACACCACAATTT+GGG + chr1_2:11155371-11155390 None:intergenic 50.0%
!! CCCAAATTGTGGTGTTGCGA+GGG - chr1_2:11155368-11155387 Msa0055840:intron 50.0%
!! CCAAATTGTGGTGTTGCGAG+GGG - chr1_2:11155369-11155388 Msa0055840:intron 50.0%
!! TCTTGGCTTGGTTCACCTTC+TGG + chr1_2:11155426-11155445 None:intergenic 50.0%
GAAGGTGAACCAAGCCAAGA+AGG - chr1_2:11155426-11155445 Msa0055840:intron 50.0%
TGAACCAAGCCAAGAAGGCA+AGG - chr1_2:11155431-11155450 Msa0055840:intron 50.0%
! GCTAACTTGCACAACCCAGT+TGG + chr1_2:11155474-11155493 None:intergenic 50.0%
AAACGGTCATAAGCGTGTCC+GGG + chr1_2:11155625-11155644 None:intergenic 50.0%
! GGACACGCTTATGACCGTTT+TGG - chr1_2:11155625-11155644 Msa0055840:intron 50.0%
GCTCTTGGAGGACACCAAAA+CGG + chr1_2:11155642-11155661 None:intergenic 50.0%
TTCCCTGTCAGTACTGTGAC+AGG + chr1_2:11155683-11155702 None:intergenic 50.0%
TTTACCGGAGCAAGACGTGA+AGG + chr1_2:11155709-11155728 None:intergenic 50.0%
TTCACGTCTTGCTCCGGTAA+AGG - chr1_2:11155708-11155727 Msa0055840:intron 50.0%
CACTTCCAAAGCCTTGGAGA+AGG + chr1_2:11155772-11155791 None:intergenic 50.0%
!! CTTCTCCAAGGCTTTGGAAG+TGG - chr1_2:11155770-11155789 Msa0055840:intron 50.0%
AATGCCCACTTCCAAAGCCT+TGG + chr1_2:11155778-11155797 None:intergenic 50.0%
!! AAGGCTTTGGAAGTGGGCAT+TGG - chr1_2:11155777-11155796 Msa0055840:intron 50.0%
!! AGGCTTTGGAAGTGGGCATT+GGG - chr1_2:11155778-11155797 Msa0055840:intron 50.0%
!! GATTTGCTGACCCTAAGGCT+TGG + chr1_2:11155810-11155829 None:intergenic 50.0%
!! GAGGTTGGTGGTATTCCCTT+TGG - chr1_2:11155846-11155865 Msa0055840:intron 50.0%
CCTCAAGCGCAAAATGATGG+AGG + chr1_2:11155904-11155923 None:intergenic 50.0%
! CCTCCATCATTTTGCGCTTG+AGG - chr1_2:11155901-11155920 Msa0055840:intron 50.0%
TTTGTCCCCAGCATTTCCGA+TGG - chr1_2:11155926-11155945 Msa0055840:intron 50.0%
GTGCTATAGCACTGTCGTAG+CGG + chr1_2:11156437-11156456 None:intergenic 50.0%
!! ACCTGTTTGACTTGGTGTCG+AGG + chr1_2:11156844-11156863 None:intergenic 50.0%
! TTGTGGCACTGAACAAGAGG+TGG - chr1_2:11156990-11157009 Msa0055840:intron 50.0%
! TGTGGCACTGAACAAGAGGT+GGG - chr1_2:11156991-11157010 Msa0055840:intron 50.0%
TACTGTCAGGAGGTTCTTCC+AGG - chr1_2:11157219-11157238 Msa0055840:CDS 50.0%
TGCATTGCTCCTTCCACACA+GGG + chr1_2:11158541-11158560 None:intergenic 50.0%
ATGCATTGCTCCTTCCACAC+AGG + chr1_2:11158542-11158561 None:intergenic 50.0%
! CAGACCGACTTTGAACAGAG+AGG + chr1_2:11159003-11159022 None:intergenic 50.0%
TACACTACGCGCATGCTTAC+GGG - chr1_2:11159138-11159157 Msa0055840:five_prime_UTR 50.0%
GTGCATACTGAAGGAGGAGA+AGG + chr1_2:11159381-11159400 None:intergenic 50.0%
GCTGTTCTCTCTTGGCTACA+AGG - chr1_2:11159679-11159698 Msa0055840:five_prime_UTR 50.0%
!! TCGTTTGGTGGATTCGGGTT+AGG - chr1_2:11159807-11159826 Msa0055840:five_prime_UTR 50.0%
!! CGTTTGGTGGATTCGGGTTA+GGG - chr1_2:11159808-11159827 Msa0055840:five_prime_UTR 50.0%
!! GAGGTCTTGGTTTGGAGGCA+AGG - chr1_2:11151233-11151252 Msa0055840:intron 55.0%
GCGGTGACTGTGTGACATCA+AGG + chr1_2:11151644-11151663 None:intergenic 55.0%
! CTTTCACAGGGCATCCGAAG+TGG - chr1_2:11151885-11151904 Msa0055840:CDS 55.0%
GTTGTGTTCCTCTCTTGGGG+TGG - chr1_2:11152871-11152890 Msa0055840:intron 55.0%
! TCTCTTGGGGTGGTGGTGAT+CGG - chr1_2:11152881-11152900 Msa0055840:intron 55.0%
AGCTTGTATCATGGGCGAGG+TGG - chr1_2:11153114-11153133 Msa0055840:intron 55.0%
GGCATCTTCTCCGGTAGTGT+TGG + chr1_2:11153386-11153405 None:intergenic 55.0%
ACCGGAGAAGATGCCGAATC+AGG - chr1_2:11153391-11153410 Msa0055840:intron 55.0%
!! CCCTGATTCGGCATCTTCTC+CGG + chr1_2:11153395-11153414 None:intergenic 55.0%
CCGGAGAAGATGCCGAATCA+GGG - chr1_2:11153392-11153411 Msa0055840:intron 55.0%
CCCCTCGCAACACCACAATT+TGG + chr1_2:11155372-11155391 None:intergenic 55.0%
! GGTGTTGCGAGGGGTGAATT+TGG - chr1_2:11155378-11155397 Msa0055840:intron 55.0%
ATCCCTCCATAGCCACCAGA+AGG - chr1_2:11155408-11155427 Msa0055840:intron 55.0%
CACCTTCTGGTGGCTATGGA+GGG + chr1_2:11155413-11155432 None:intergenic 55.0%
TCACCTTCTGGTGGCTATGG+AGG + chr1_2:11155414-11155433 None:intergenic 55.0%
GGTTCACCTTCTGGTGGCTA+TGG + chr1_2:11155417-11155436 None:intergenic 55.0%
!! TGGCTTGGTTCACCTTCTGG+TGG + chr1_2:11155423-11155442 None:intergenic 55.0%
TTGTTCACATGGGCGCCAAC+TGG - chr1_2:11155456-11155475 Msa0055840:intron 55.0%
TGTTCACATGGGCGCCAACT+GGG - chr1_2:11155457-11155476 Msa0055840:intron 55.0%
GGATGCCCTTGATAGGGAGT+AGG - chr1_2:11155507-11155526 Msa0055840:intron 55.0%
TGAAGGTTCGCCCTTCTCCA+AGG - chr1_2:11155758-11155777 Msa0055840:intron 55.0%
TTCGCCCTTCTCCAAGGCTT+TGG - chr1_2:11155764-11155783 Msa0055840:intron 55.0%
!! CTTTGGAAGTGGGCATTGGG+CGG - chr1_2:11155781-11155800 Msa0055840:intron 55.0%
! GCGCAAAATGATGGAGGAGC+AGG + chr1_2:11155898-11155917 None:intergenic 55.0%
! GGCTTCAGAGTGTCCCATGA+CGG - chr1_2:11156711-11156730 Msa0055840:intron 55.0%
GCCTCGACACCAAGTCAAAC+AGG - chr1_2:11156840-11156859 Msa0055840:intron 55.0%
!! GAGGGCATTGAGCACAGAAC+AGG + chr1_2:11156923-11156942 None:intergenic 55.0%
GCATTGCTCCTTCCACACAG+GGG + chr1_2:11158540-11158559 None:intergenic 55.0%
GTGTTCCTCTCTTGGGGTGG+TGG - chr1_2:11152874-11152893 Msa0055840:intron 60.0%
GATCACCACCACCCCAAGAG+AGG + chr1_2:11152882-11152901 None:intergenic 60.0%
TGCAACAGGGGGCCCTGATT+CGG + chr1_2:11153407-11153426 None:intergenic 60.0%
TTGGGCGGAAGCCAAGCCTT+AGG - chr1_2:11155796-11155815 Msa0055840:intron 60.0%
TGGGCGGAAGCCAAGCCTTA+GGG - chr1_2:11155797-11155816 Msa0055840:intron 60.0%
GAGAGACAGTCACCCCTGTG+TGG - chr1_2:11158525-11158544 Msa0055840:five_prime_UTR 60.0%
GACAGTCACCCCTGTGTGGA+AGG - chr1_2:11158529-11158548 Msa0055840:five_prime_UTR 60.0%
GGAGCTCTGTGAGCACTCAC+TGG + chr1_2:11158903-11158922 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 11150481 11159963 11150481 ID=Msa0055840;Name=Msa0055840
chr1_2 mRNA 11150481 11159963 11150481 ID=Msa0055840-mRNA-1;Parent=Msa0055840;Name=Msa0055840-mRNA-1;_AED=0.12;_eAED=0.13;_QI=2013|0.63|0.83|1|0.54|0.58|12|374|305
chr1_2 exon 11150481 11150965 11150481 ID=Msa0055840-mRNA-1:exon:4264;Parent=Msa0055840-mRNA-1
chr1_2 exon 11151343 11151454 11151343 ID=Msa0055840-mRNA-1:exon:4263;Parent=Msa0055840-mRNA-1
chr1_2 exon 11151542 11151633 11151542 ID=Msa0055840-mRNA-1:exon:4262;Parent=Msa0055840-mRNA-1
chr1_2 exon 11151859 11151941 11151859 ID=Msa0055840-mRNA-1:exon:4261;Parent=Msa0055840-mRNA-1
chr1_2 exon 11152052 11152092 11152052 ID=Msa0055840-mRNA-1:exon:4260;Parent=Msa0055840-mRNA-1
chr1_2 exon 11152741 11152784 11152741 ID=Msa0055840-mRNA-1:exon:4259;Parent=Msa0055840-mRNA-1
chr1_2 exon 11152938 11153015 11152938 ID=Msa0055840-mRNA-1:exon:4258;Parent=Msa0055840-mRNA-1
chr1_2 exon 11153583 11153642 11153583 ID=Msa0055840-mRNA-1:exon:4257;Parent=Msa0055840-mRNA-1
chr1_2 exon 11156994 11157064 11156994 ID=Msa0055840-mRNA-1:exon:4256;Parent=Msa0055840-mRNA-1
chr1_2 exon 11157194 11157333 11157194 ID=Msa0055840-mRNA-1:exon:4255;Parent=Msa0055840-mRNA-1
chr1_2 exon 11157834 11159904 11157834 ID=Msa0055840-mRNA-1:exon:4254;Parent=Msa0055840-mRNA-1
chr1_2 exon 11159936 11159963 11159936 ID=Msa0055840-mRNA-1:exon:4253;Parent=Msa0055840-mRNA-1
chr1_2 five_prime_UTR 11159936 11159963 11159936 ID=Msa0055840-mRNA-1:five_prime_utr;Parent=Msa0055840-mRNA-1
chr1_2 five_prime_UTR 11157920 11159904 11157920 ID=Msa0055840-mRNA-1:five_prime_utr;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11157834 11157919 11157834 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11157194 11157333 11157194 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11156994 11157064 11156994 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11153583 11153642 11153583 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11152938 11153015 11152938 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11152741 11152784 11152741 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11152052 11152092 11152052 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11151859 11151941 11151859 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11151542 11151633 11151542 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11151343 11151454 11151343 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 CDS 11150855 11150965 11150855 ID=Msa0055840-mRNA-1:cds;Parent=Msa0055840-mRNA-1
chr1_2 three_prime_UTR 11150481 11150854 11150481 ID=Msa0055840-mRNA-1:three_prime_utr;Parent=Msa0055840-mRNA-1
Gene Sequence

>Msa0055840

ATGGTGCAGACTATATGGAGTGATAATATATATGCTTTTGGTAAGTTTCGGTCTCTGGAGGAATCAACGCTGAACTGCATTTTAAGGATAGCTTGTATCATGGGCGAGGTGGCAGTGTTGCATTCTGAGCCTCTGCAATTTGAATGCAATGACAAGAAACATATGACCGAAGAAGGCGTTTATCCTCCAAAATCAAATCCGGAATCCTTGCCTGGAGAAGAATCAAATGCCAACACTACCGGAGAAGATGCCGAATCAGGGCCCCCTGTTGCAATGAGATTTTTGATTGCCGCCATTAATGATATCAACGTAGATTATAAGCATAGACACGACATGCCTCGACACCAAGTCAAACAGGCGCAGCAAAATTGCGTTAATTGTGGTGTTTGCATGGGCAAGTACTTTTGTGATACATGCAAGCTCTACGACGATGATATATCTAAGCAGCAGTACCATTGTAATGGCTGTGGAATTTGCAGAACTGGCGGACGAGAGAATTTCTTCCATTGTAATAAGTGTGGTTGTTGCTACTCAACTCTGCTGAGAGACAGTCACCCCTGTGTGGAAGGAGCAATGCATCATGATTGCCCTGTTTGTTTTGAGTATTTGTTTGAATCAAGAAATGATGTCATTGTTATGCCGTGCGGACATACAATCCATAAAAGCTGTCTGAATGAAATGAGAGAACATTTCCAGTTCACATGCCCTCTCTGTTCAAAGTCGGTCTGTGATATGTCAAAGGTTTGGGAGAAATTGGACATGGAGATTGCTGCTACACCAATGCCTGAGCTATATCAAAACAAAATGGTTTGGATCCTGTGCAATGATTGTGGAAAAACCTCTAATGTCCGTTTCCATTTTGTAGCGCAAAAATGCCTCAACTGCAATTCCTACAACACACGACAAACAAGAGGCTGA
Protein sequence

>Msa0055840

MVQTIWSDNIYAFGKFRSLEESTLNCILRIACIMGEVAVLHSEPLQFECNDKKHMTEEGVYPPKSNPESLPGEESNANTTGEDAESGPPVAMRFLIAAINDINVDYKHRHDMPRHQVKQAQQNCVNCGVCMGKYFCDTCKLYDDDISKQQYHCNGCGICRTGGRENFFHCNKCGCCYSTLLRDSHPCVEGAMHHDCPVCFEYLFESRNDVIVMPCGHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEKLDMEIAATPMPELYQNKMVWILCNDCGKTSNVRFHFVAQKCLNCNSYNTRQTRG*