AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0153480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153480 MtrunA17_Chr1g0148421 94.737 38 2 0 26 63 229 266 2.12e-21 84.3
Msa0153480 MtrunA17_Chr1g0169881 84.211 38 6 0 26 63 228 265 7.30e-19 77.4
Msa0153480 MtrunA17_Chr3g0138621 81.081 37 7 0 26 62 236 272 6.87e-18 74.7
Msa0153480 MtrunA17_Chr7g0264931 66.667 39 13 0 25 63 195 233 5.48e-15 66.6
Msa0153480 MtrunA17_Chr4g0028121 59.459 37 15 0 26 62 232 268 1.19e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153480 AT5G25560.4 80.488 41 8 0 26 66 230 270 5.64e-20 80.9
Msa0153480 AT5G25560.1 80.488 41 8 0 26 66 235 275 6.07e-20 80.9
Msa0153480 AT5G25560.5 80.488 41 8 0 26 66 235 275 6.07e-20 80.9
Msa0153480 AT5G25560.6 80.488 41 8 0 26 66 235 275 6.07e-20 80.9
Msa0153480 AT5G25560.2 80.488 41 8 0 26 66 235 275 6.07e-20 80.9
Msa0153480 AT5G25560.3 80.488 41 8 0 26 66 245 285 9.23e-20 80.5
Msa0153480 AT5G22920.2 68.421 38 12 0 26 63 199 236 4.55e-15 67.0
Msa0153480 AT5G22920.1 68.421 38 12 0 26 63 199 236 8.32e-15 66.6
Msa0153480 AT5G18650.1 59.459 37 15 0 26 62 189 225 7.67e-11 55.8

Find 179 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATAACTTGTACTTTAT+AGG 0.169060 1_4:-16850922 None:intergenic
TCTGTCAGTTTCAGCTTCTT+TGG 0.193748 1_4:+16850346 Msa0153480:five_prime_UTR
GTCAAAGGTTTGGGAGAAAT+TGG 0.205837 1_4:+16858520 Msa0153480:CDS
AGCTCCAACAACTTCAAAAT+TGG 0.213420 1_4:-16851695 None:intergenic
AAGGATTCCGGATTTGATTT+TGG 0.221633 1_4:-16852728 None:intergenic
ATTATATCAGTTTAGGTTAT+AGG 0.222174 1_4:+16851375 Msa0153480:five_prime_UTR
GTCTTGTTGTGTTCCTCTCT+TGG 0.253610 1_4:+16852383 Msa0153480:five_prime_UTR
TTGAACATTCGCACTACTTC+AGG 0.257889 1_4:-16851939 None:intergenic
GTATTTACTCTTTCTTGATT+TGG 0.261296 1_4:+16850263 Msa0153480:five_prime_UTR
CTTCATATCATGTTATGTTT+AGG 0.283914 1_4:+16850577 Msa0153480:five_prime_UTR
ATTAATGATTATATCAGTTT+AGG 0.291138 1_4:+16851368 Msa0153480:five_prime_UTR
TCTTGTTGTGTTCCTCTCTT+GGG 0.313235 1_4:+16852384 Msa0153480:five_prime_UTR
GAATGGCTTTGATGCTAGTT+TGG 0.316601 1_4:+16851793 Msa0153480:five_prime_UTR
AAGAATCCTTATGTCATAGA+AGG 0.324300 1_4:-16851905 None:intergenic
TTGGTGTTTACCTGGCTTGA+TGG 0.330782 1_4:+16852493 Msa0153480:five_prime_UTR
TCTTCTCCAGCCAAGGATTC+CGG 0.334834 1_4:-16852740 None:intergenic
TATCAACTAGATCTAGAAAT+AGG 0.336249 1_4:-16852593 None:intergenic
TAACACGATTCATTGCTATA+AGG 0.336294 1_4:+16850709 Msa0153480:five_prime_UTR
TTACCATGGTGCAGACTATA+TGG 0.342233 1_4:+16852037 Msa0153480:five_prime_UTR
AGGTCAATCATCTATGTAAC+TGG 0.344820 1_4:-16851287 None:intergenic
ATTAAGTTTCTCACCCCATA+TGG 0.346434 1_4:-16850872 None:intergenic
TGAATAGTCTCACAAGTGTT+TGG 0.349126 1_4:+16851011 Msa0153480:five_prime_UTR
CTTAAGTAAGCTAGTTCAAC+TGG 0.349344 1_4:+16851039 Msa0153480:five_prime_UTR
ATCAAGTACATATGATTTGC+AGG 0.350981 1_4:+16852763 Msa0153480:five_prime_UTR
TGAGTTCAATATGATTCAAC+TGG 0.352442 1_4:-16851068 None:intergenic
CAAAATTGGCTTCAAACTCT+TGG 0.352568 1_4:-16851681 None:intergenic
CAGATGGGGAAGGCATTAAA+AGG 0.366366 1_4:-16851572 None:intergenic
TCAATTAATTATGACCCATA+TGG 0.368369 1_4:+16850857 Msa0153480:five_prime_UTR
AGTGATAATATATATGCTTT+TGG 0.368641 1_4:+16852060 Msa0153480:five_prime_UTR
CAGCATAAGCATTCTACAAC+TGG 0.369478 1_4:-16851439 None:intergenic
AGTTTCAGCTTCTTTGGATT+CGG 0.375123 1_4:+16850352 Msa0153480:five_prime_UTR
AAATAGGTTGAAGTTTCTAT+TGG 0.380135 1_4:+16852218 Msa0153480:intron
TTGGTTTGGTCCACTATAGT+TGG 0.388909 1_4:+16852237 Msa0153480:five_prime_UTR
TTTGCAGGAGAAGGGATATA+TGG 0.390895 1_4:+16852778 Msa0153480:five_prime_UTR
CTGTGATATGTCAAAGGTTT+GGG 0.397365 1_4:+16858511 Msa0153480:CDS
TTGTGATAGGTAATGTAGTT+TGG 0.400164 1_4:+16850380 Msa0153480:five_prime_UTR
AAAATCTGAAACAAAATTGC+TGG 0.400253 1_4:-16851510 None:intergenic
TTACATAGATGATTGACCTT+AGG 0.400353 1_4:+16851291 Msa0153480:five_prime_UTR
TGAGCCATATCAAAACAAAA+TGG 0.400566 1_4:+16858571 Msa0153480:CDS
TTTCGAATCTCCAATCTTCA+AGG 0.404332 1_4:-16850151 None:intergenic
TTGCTTCCTGCAGTTGGAGA+TGG 0.406758 1_4:-16851536 None:intergenic
CAATTAATTATGACCCATAT+GGG 0.410514 1_4:+16850858 Msa0153480:five_prime_UTR
GGTTGAAGTTTCTATTGGTT+TGG 0.412128 1_4:+16852223 Msa0153480:intron
GAATAGTCTCACAAGTGTTT+GGG 0.414273 1_4:+16851012 Msa0153480:five_prime_UTR
GGATTCGGTTCTGTTGTGAT+AGG 0.414403 1_4:+16850367 Msa0153480:five_prime_UTR
TGCAACAGGGGCCTCTGATT+CGG 0.416118 1_4:-16852921 None:intergenic
GTGTTCCTCTCTTGGGGTGG+TGG 0.418714 1_4:+16852391 Msa0153480:five_prime_UTR
CTGTCTTATTTCGTCAAGCT+TGG 0.420981 1_4:+16851657 Msa0153480:five_prime_UTR
TTATGTTTAGGAGGCGTTTG+AGG 0.421766 1_4:+16850589 Msa0153480:five_prime_UTR
TTTGTGTTGCTGATTACAAT+TGG 0.422430 1_4:+16852437 Msa0153480:five_prime_UTR
ATGTCTTCGTATCACAATTA+CGG 0.423546 1_4:-16851118 None:intergenic
TATGTTTAGGAGGCGTTTGA+GGG 0.423996 1_4:+16850590 Msa0153480:five_prime_UTR
AGAAATAGGCAGTAAGCTTA+AGG 0.424237 1_4:-16852579 None:intergenic
TGGTGTTTACCTGGCTTGAT+GGG 0.425464 1_4:+16852494 Msa0153480:five_prime_UTR
TCTCTTGGGGTGGTGGTGAT+CGG 0.430532 1_4:+16852398 Msa0153480:five_prime_UTR
TACATAGATGATTGACCTTA+GGG 0.430824 1_4:+16851292 Msa0153480:five_prime_UTR
ACAAAATTGCTGGTGCTGTT+TGG 0.432289 1_4:-16851500 None:intergenic
CTCTGATTCGGCATCTTCTC+CGG 0.435085 1_4:-16852909 None:intergenic
CTAGTTGATAATCTTATTTG+AGG 0.443439 1_4:+16852606 Msa0153480:five_prime_UTR
CAAGAAATCAACAATGCGTT+TGG 0.445847 1_4:+16852474 Msa0153480:five_prime_UTR
TGGAGGATAAACGCCTTCTT+CGG 0.450394 1_4:-16852708 None:intergenic
CAATGCGTTTGGTGTTTACC+TGG 0.451522 1_4:+16852485 Msa0153480:five_prime_UTR
AACACGATTCATTGCTATAA+GGG 0.451627 1_4:+16850710 Msa0153480:five_prime_UTR
AACCACTAGAGGCCTGTGAT+AGG 0.452024 1_4:-16851226 None:intergenic
GCCTCGACACCAAGTCAAAC+AGG 0.452342 1_4:+16856333 Msa0153480:five_prime_UTR
AAAATCAAATCCGGAATCCT+TGG 0.452435 1_4:+16852730 Msa0153480:five_prime_UTR
TTTGTTCTGGGAGTTCTTCA+AGG 0.456293 1_4:+16852262 Msa0153480:five_prime_UTR
GTTGAATCATATTGAACTCA+TGG 0.458110 1_4:+16851071 Msa0153480:five_prime_UTR
ATAAGGGTATCAAGAGGTCT+TGG 0.460888 1_4:+16850726 Msa0153480:five_prime_UTR
CGTTAATTGTGGTGTTTGCA+TGG 0.461112 1_4:+16856936 Msa0153480:five_prime_UTR
GAGGTCTTGGTTTGGAGGCA+AGG 0.463730 1_4:+16850739 Msa0153480:five_prime_UTR
CACTGCTACATTGTAATATG+TGG 0.465738 1_4:+16852341 Msa0153480:five_prime_UTR
AGAACAAAATCCAACTATAG+TGG 0.466920 1_4:-16852247 None:intergenic
TAGAGGCCTGTGATAGGAAC+AGG 0.468934 1_4:-16851220 None:intergenic
GAAGTTGTTGGAGCTTCGTA+TGG 0.470627 1_4:+16851703 Msa0153480:five_prime_UTR
CATATCATGTTATGTTTAGG+AGG 0.473581 1_4:+16850580 Msa0153480:five_prime_UTR
CTAAATTTGTTCGTACATGC+AGG 0.474635 1_4:+16852555 Msa0153480:five_prime_UTR
TCTGTGATATGTCAAAGGTT+TGG 0.478142 1_4:+16858510 Msa0153480:CDS
TTTGAGGATAGCTTGTATCA+TGG 0.478756 1_4:+16852622 Msa0153480:five_prime_UTR
TGAACATTCGCACTACTTCA+GGG 0.482367 1_4:-16851938 None:intergenic
GACAACCGCTTATCATGGTA+AGG 0.483673 1_4:-16850900 None:intergenic
TATAGGACAACCGCTTATCA+TGG 0.486082 1_4:-16850905 None:intergenic
TGTCATAGAAGGTTTGCAGC+AGG 0.491209 1_4:-16851894 None:intergenic
GGTATCAAGAGGTCTTGGTT+TGG 0.492904 1_4:+16850731 Msa0153480:five_prime_UTR
TTGAGGATAGCTTGTATCAT+GGG 0.493617 1_4:+16852623 Msa0153480:five_prime_UTR
GTAATGGCTGTGGAATTTGC+AGG 0.495528 1_4:+16857175 Msa0153480:CDS
TGCAAACCTTCTATGACATA+AGG 0.498123 1_4:+16851899 Msa0153480:five_prime_UTR
TTATCCTCCAAAATCAAATC+CGG 0.499360 1_4:+16852721 Msa0153480:five_prime_UTR
CAACACAAAATCATATTATG+AGG 0.502615 1_4:-16852423 None:intergenic
CCTGGTCCTGTTCCTATCAC+AGG 0.503379 1_4:+16851214 Msa0153480:five_prime_UTR
AAAGAGTAAATACGAACAAA+CGG 0.503441 1_4:-16850253 None:intergenic
TACATATGATTTGCAGGAGA+AGG 0.503985 1_4:+16852769 Msa0153480:five_prime_UTR
TTGTTGGAGCTTCGTATGGG+TGG 0.506754 1_4:+16851707 Msa0153480:five_prime_UTR
TGCACCATGGTAAAATCACT+TGG 0.508982 1_4:-16852027 None:intergenic
ATTGAAATAAGATTTCACTT+TGG 0.509360 1_4:+16850814 Msa0153480:five_prime_UTR
TTAAGTTTCTCACCCCATAT+GGG 0.516164 1_4:-16850871 None:intergenic
TTTGATCCATCTCCAACTGC+AGG 0.517421 1_4:+16851530 Msa0153480:five_prime_UTR
TTTGCAGATGCCAACACTAC+CGG 0.517868 1_4:+16852890 Msa0153480:intron
AAGAAACATATGACCGAAGA+AGG 0.522486 1_4:+16852695 Msa0153480:five_prime_UTR
CAGCAAAATTGCGTTAATTG+TGG 0.522657 1_4:+16856925 Msa0153480:five_prime_UTR
ATCAAGAGGTCTTGGTTTGG+AGG 0.523579 1_4:+16850734 Msa0153480:five_prime_UTR
CAATTAATATTATTTCCCTA+AGG 0.526580 1_4:-16851307 None:intergenic
TAGGTAGAGAAGTCTTTCAC+AGG 0.526998 1_4:+16851394 Msa0153480:five_prime_UTR
GTCATAGAAGGTTTGCAGCA+GGG 0.527633 1_4:-16851893 None:intergenic
GGCATCTTCTCCGGTAGTGT+TGG 0.528892 1_4:-16852900 None:intergenic
ACATGAATCAGTGTCGTGTC+TGG 0.529814 1_4:-16850642 None:intergenic
CTAATTGTATTTACTGCCGA+AGG 0.533082 1_4:+16852305 Msa0153480:five_prime_UTR
TCAAATCCGGAATCCTTGGC+TGG 0.535599 1_4:+16852734 Msa0153480:five_prime_UTR
TTCCTATCACAGGCCTCTAG+TGG 0.536414 1_4:+16851224 Msa0153480:five_prime_UTR
TGAAATTTACCTGTTTGTTG+AGG 0.536482 1_4:+16850513 Msa0153480:five_prime_UTR
CAGGTGATATGTTCACTTTG+TGG 0.539492 1_4:+16856467 Msa0153480:intron
AAGCAGCAGTACCATTGTAA+TGG 0.540337 1_4:+16857159 Msa0153480:CDS
ACTTGATTCTTCTCCAGCCA+AGG 0.541037 1_4:-16852747 None:intergenic
TTTAGTCACCCCATCAAGCC+AGG 0.541385 1_4:-16852503 None:intergenic
CAGTACCATTGTAATGGCTG+TGG 0.543474 1_4:+16857165 Msa0153480:CDS
ACATATTACAATGTAGCAGT+GGG 0.544691 1_4:-16852339 None:intergenic
GATTTCTTGCATACTGCCGC+AGG 0.555095 1_4:-16852460 None:intergenic
TTTATTTGTCGGACAGCAAG+AGG 0.555509 1_4:+16851771 Msa0153480:five_prime_UTR
CTTGTTGTGTTCCTCTCTTG+GGG 0.555720 1_4:+16852385 Msa0153480:five_prime_UTR
TTGTCTTTAGTAGTGATCCA+TGG 0.558388 1_4:+16850766 Msa0153480:five_prime_UTR
TGTTGGAGCTTCGTATGGGT+GGG 0.561874 1_4:+16851708 Msa0153480:five_prime_UTR
GTTGTGTTCCTCTCTTGGGG+TGG 0.565072 1_4:+16852388 Msa0153480:five_prime_UTR
GAAGAATAAGCGATTATGAG+AGG 0.565584 1_4:-16850074 None:intergenic
ACCTGTTTGACTTGGTGTCG+AGG 0.565593 1_4:-16856334 None:intergenic
TTGTCGGACAGCAAGAGGAA+TGG 0.570006 1_4:+16851776 Msa0153480:five_prime_UTR
ACATATGATTTGCAGGAGAA+GGG 0.570282 1_4:+16852770 Msa0153480:five_prime_UTR
CACATATTACAATGTAGCAG+TGG 0.575076 1_4:-16852340 None:intergenic
GAGAAGGGATATATGGAACA+TGG 0.576071 1_4:+16852785 Msa0153480:five_prime_UTR
GTTAATTGTGGTGTTTGCAT+GGG 0.576398 1_4:+16856937 Msa0153480:five_prime_UTR
GTCGGTCTGTGATATGTCAA+AGG 0.586948 1_4:+16858505 Msa0153480:CDS
ACTTTGTGGCACTGAACAAG+AGG 0.589182 1_4:+16856481 Msa0153480:five_prime_UTR
CGGAGAAGATGCCGAATCAG+AGG 0.589666 1_4:+16852910 Msa0153480:five_prime_UTR
TGCAACTGCAGAAATACAGA+TGG 0.592512 1_4:-16851588 None:intergenic
TGGTAAGTTTCGGTATCTGG+AGG 0.596663 1_4:+16852080 Msa0153480:five_prime_UTR
ATAAGAATACCTGTTTGACT+TGG 0.598715 1_4:-16856342 None:intergenic
GGTGTTTACCTGGCTTGATG+GGG 0.599088 1_4:+16852495 Msa0153480:five_prime_UTR
GCAACTGCAGAAATACAGAT+GGG 0.599931 1_4:-16851587 None:intergenic
ATGCCCTCTCTGTTCAAAGT+CGG 0.600364 1_4:+16858487 Msa0153480:CDS
GTCGTGTCTGGTGTATCTGT+CGG 0.600928 1_4:-16850630 None:intergenic
GATAGCTTGTATCATGGGCG+AGG 0.602796 1_4:+16852628 Msa0153480:five_prime_UTR
TTTACAACACAAACCACTAG+AGG 0.603969 1_4:-16851237 None:intergenic
AGCTTGTATCATGGGCGAGG+TGG 0.609164 1_4:+16852631 Msa0153480:five_prime_UTR
GCGGTGACTGTGTGACATCA+AGG 0.609481 1_4:-16851147 None:intergenic
ACTGGGTAGTAGTTCTACTT+CGG 0.612443 1_4:-16851421 None:intergenic
GATCACCACCACCCCAAGAG+AGG 0.613844 1_4:-16852396 None:intergenic
AAGTTGTTGGAGCTTCGTAT+GGG 0.616841 1_4:+16851704 Msa0153480:five_prime_UTR
TAAGCCCTTACCATGATAAG+CGG 0.617684 1_4:+16850895 Msa0153480:five_prime_UTR
TCACCGACACATCTAATCAA+AGG 0.618586 1_4:-16850682 None:intergenic
TCATTGCATTCAAATTGCAG+AGG 0.622420 1_4:-16852671 None:intergenic
CCTGTGATAGGAACAGGACC+AGG 0.624566 1_4:-16851214 None:intergenic
TTGCGAAGTGATATTCGAGA+GGG 0.626596 1_4:-16850038 None:intergenic
TTGCCGCCATTGTCACAATG+AGG 0.627282 1_4:+16852957 Msa0153480:five_prime_UTR
GGTTTGGGAGAAATTGGACA+TGG 0.628537 1_4:+16858526 Msa0153480:CDS
TTGCCTCATTGTGACAATGG+CGG 0.629473 1_4:-16852960 None:intergenic
AGACCGACTTTGAACAGAGA+GGG 0.629552 1_4:-16858490 None:intergenic
ATGACTCAAAATTCTAGACC+TGG 0.635167 1_4:+16851196 Msa0153480:five_prime_UTR
TGCAGAAATACAGATGGGGA+AGG 0.637630 1_4:-16851582 None:intergenic
GAGTTCAATATGATTCAACT+GGG 0.637908 1_4:-16851067 None:intergenic
AGCATAAGCATTCTACAACT+GGG 0.638970 1_4:-16851438 None:intergenic
AGAAGGGATATATGGAACAT+GGG 0.639294 1_4:+16852786 Msa0153480:five_prime_UTR
GAGTTCTTCAAGGAATCAAG+TGG 0.652411 1_4:+16852272 Msa0153480:five_prime_UTR
ACAACCGCTTATCATGGTAA+GGG 0.656781 1_4:-16850899 None:intergenic
GTTGCGAAGTGATATTCGAG+AGG 0.658671 1_4:-16850039 None:intergenic
GCACCATGGTAAAATCACTT+GGG 0.661501 1_4:-16852026 None:intergenic
AATTAATTATGACCCATATG+GGG 0.669812 1_4:+16850859 Msa0153480:five_prime_UTR
ATGGGGAAGGCATTAAAAGG+AGG 0.671654 1_4:-16851569 None:intergenic
AGGTAGAGAAGTCTTTCACA+GGG 0.675471 1_4:+16851395 Msa0153480:five_prime_UTR
TGCTGATTACAATTGGCCTG+CGG 0.677934 1_4:+16852444 Msa0153480:five_prime_UTR
ACACCTTTGATTAGATGTGT+CGG 0.680018 1_4:+16850679 Msa0153480:five_prime_UTR
CAAGCTAATCAATGACACCA+TGG 0.688555 1_4:-16850783 None:intergenic
ATTGCTATAAGGGTATCAAG+AGG 0.689948 1_4:+16850720 Msa0153480:five_prime_UTR
AAATTCCACAGCCATTACAA+TGG 0.701862 1_4:-16857170 None:intergenic
TAGTTCTTTAAGTAGCAATG+CGG 0.703537 1_4:+16857922 Msa0153480:intron
GAACTTTCAACTCTTCACGA+CGG 0.711527 1_4:-16850203 None:intergenic
CAACTGCAGAAATACAGATG+GGG 0.716883 1_4:-16851586 None:intergenic
CATATTACAATGTAGCAGTG+GGG 0.718614 1_4:-16852338 None:intergenic
ACTCCATATAGTCTGCACCA+TGG 0.733549 1_4:-16852040 None:intergenic
CAGACCGACTTTGAACAGAG+AGG 0.734899 1_4:-16858491 None:intergenic
CTTGACGAAATAAGACAGCG+TGG 0.740760 1_4:-16851652 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAATATGAAATAAGA+TGG - chr1_4:16853065-16853084 None:intergenic 10.0%
!! TTTATATTTATTTAGATGAA+AGG - chr1_4:16853309-16853328 None:intergenic 10.0%
!!! TATTAACTTGTAAATTTTTA+TGG - chr1_4:16853889-16853908 None:intergenic 10.0%
!!! AAATTTTTTTATTAGCATTA+CGG - chr1_4:16856439-16856458 None:intergenic 10.0%
!! GATATAGAATTTATTTATAA+AGG + chr1_4:16856553-16856572 Msa0153480:intron 10.0%
!!! CATGTAAATTTTATAATAAA+GGG - chr1_4:16857552-16857571 None:intergenic 10.0%
!!! ACATGTAAATTTTATAATAA+AGG - chr1_4:16857553-16857572 None:intergenic 10.0%
!!! AGTTGTAAATATTTTAATTA+GGG + chr1_4:16858192-16858211 Msa0153480:intron 10.0%
!! ATTAATGATTATATCAGTTT+AGG + chr1_4:16851368-16851387 Msa0153480:five_prime_UTR 15.0%
!!! TTTATTTTATTATCCACAAA+GGG - chr1_4:16852140-16852159 None:intergenic 15.0%
!!! GTATAATAGTTTAAGATATT+CGG - chr1_4:16853741-16853760 None:intergenic 15.0%
!! TAAGATTTATGTCTTATATA+AGG - chr1_4:16854570-16854589 None:intergenic 15.0%
!! ATATAAGACATAAATCTTAA+AGG + chr1_4:16854571-16854590 Msa0153480:intron 15.0%
!! TATAAGACATAAATCTTAAA+GGG + chr1_4:16854572-16854591 Msa0153480:intron 15.0%
!!! AAAAAAAATAACAGCTTTTA+AGG + chr1_4:16855764-16855783 Msa0153480:intron 15.0%
!! AGTGAAAATTTAATTGTAAT+TGG + chr1_4:16856075-16856094 Msa0153480:intron 15.0%
!! TAAAAAAATTTGATGTATAC+AGG + chr1_4:16856448-16856467 Msa0153480:intron 15.0%
!! ATAAAATTTACATGTCATAT+TGG + chr1_4:16857558-16857577 Msa0153480:intron 15.0%
!!! GAGTTGTAAATATTTTAATT+AGG + chr1_4:16858191-16858210 Msa0153480:intron 15.0%
!! TAATTAGGGTTAATTTAAAT+TGG + chr1_4:16858206-16858225 Msa0153480:intron 15.0%
!!! TTAATTTTTGGCAAATTAAA+AGG + chr1_4:16858725-16858744 Msa0153480:intron 15.0%
!! ATTGAAATAAGATTTCACTT+TGG + chr1_4:16850814-16850833 Msa0153480:five_prime_UTR 20.0%
!!! AGAAATAACTTGTACTTTAT+AGG - chr1_4:16850925-16850944 None:intergenic 20.0%
!! CAATTAATATTATTTCCCTA+AGG - chr1_4:16851310-16851329 None:intergenic 20.0%
!!! ATTATATCAGTTTAGGTTAT+AGG + chr1_4:16851375-16851394 Msa0153480:five_prime_UTR 20.0%
!!! ATCCATTTGTTTTTATTTGT+CGG + chr1_4:16851760-16851779 Msa0153480:five_prime_UTR 20.0%
!!! AGTGATAATATATATGCTTT+TGG + chr1_4:16852060-16852079 Msa0153480:five_prime_UTR 20.0%
!!! GTTTATTTTATTATCCACAA+AGG - chr1_4:16852141-16852160 None:intergenic 20.0%
!! TGATTTATTGCTTTCAAAAT+AGG + chr1_4:16852202-16852221 Msa0153480:intron 20.0%
!!! ATATAACTTGTAGAAGTTTT+AGG + chr1_4:16852525-16852544 Msa0153480:five_prime_UTR 20.0%
!!! AAGTCTAATTTTATGGAAAA+AGG - chr1_4:16852868-16852887 None:intergenic 20.0%
!!! GCAAATAAAGTCTAATTTTA+TGG - chr1_4:16852875-16852894 None:intergenic 20.0%
!! TATTTATTTAGATGAAAGGA+GGG - chr1_4:16853305-16853324 None:intergenic 20.0%
!! ATATTTATTTAGATGAAAGG+AGG - chr1_4:16853306-16853325 None:intergenic 20.0%
!! TCTTATAACTGTATATTATG+TGG - chr1_4:16853476-16853495 None:intergenic 20.0%
!! TTGTGTTAAATTACAAGAAA+AGG + chr1_4:16853524-16853543 Msa0153480:intron 20.0%
!!! AAGAATTAGTTCTAATTAGT+AGG - chr1_4:16853600-16853619 None:intergenic 20.0%
!! GAGATTATTCACAATTTATT+TGG - chr1_4:16853664-16853683 None:intergenic 20.0%
!! TAATTGAAGTTAATCAGAAA+AGG - chr1_4:16853953-16853972 None:intergenic 20.0%
!! CTGATTAACTTCAATTATTT+CGG + chr1_4:16853956-16853975 Msa0153480:intron 20.0%
!! AAAAATAAGTCTGCTTATAA+AGG + chr1_4:16854409-16854428 Msa0153480:intron 20.0%
!! ATAAGACATAAATCTTAAAG+GGG + chr1_4:16854573-16854592 Msa0153480:intron 20.0%
!!! ATTTTTTGGTCTTTCAAAAA+TGG - chr1_4:16855480-16855499 None:intergenic 20.0%
!!! CTTTTCAAATCTCTATTTTT+TGG - chr1_4:16855494-16855513 None:intergenic 20.0%
!!! GTTTTTCTTGTTCATTTTAT+TGG + chr1_4:16855913-16855932 Msa0153480:intron 20.0%
!! ATTTGTGAATGTTCAAATTA+AGG - chr1_4:16856381-16856400 None:intergenic 20.0%
!! CATGCATAAAGAAAATAATA+TGG + chr1_4:16856671-16856690 Msa0153480:intron 20.0%
!!! GATTTTTACTACTTAATTTC+AGG + chr1_4:16856900-16856919 Msa0153480:intron 20.0%
!!! TTTTCAGTCTACTTTATTAT+AGG + chr1_4:16857300-16857319 Msa0153480:intron 20.0%
!! CTTGTTCAAAGTTTATTAAT+TGG - chr1_4:16858111-16858130 None:intergenic 20.0%
!! ACTGATATAATAACTATTAC+AGG - chr1_4:16858164-16858183 None:intergenic 20.0%
!! ACAAATAAAATGAGATGAAA+TGG - chr1_4:16859128-16859147 None:intergenic 20.0%
!!! TCTCATTTTATTTGTTATGA+AGG + chr1_4:16859133-16859152 Msa0153480:intron 20.0%
! AAAGAGTAAATACGAACAAA+CGG - chr1_4:16850256-16850275 None:intergenic 25.0%
! GTATTTACTCTTTCTTGATT+TGG + chr1_4:16850263-16850282 Msa0153480:five_prime_UTR 25.0%
!!! TTTAGATTAGAAGCTGTTTT+TGG + chr1_4:16850431-16850450 Msa0153480:intron 25.0%
!!! TTGTTTTGTTTTGTTTGTTG+TGG + chr1_4:16850539-16850558 Msa0153480:five_prime_UTR 25.0%
! CTTCATATCATGTTATGTTT+AGG + chr1_4:16850577-16850596 Msa0153480:five_prime_UTR 25.0%
! TCAATTAATTATGACCCATA+TGG + chr1_4:16850857-16850876 Msa0153480:five_prime_UTR 25.0%
! CAATTAATTATGACCCATAT+GGG + chr1_4:16850858-16850877 Msa0153480:five_prime_UTR 25.0%
! AATTAATTATGACCCATATG+GGG + chr1_4:16850859-16850878 Msa0153480:five_prime_UTR 25.0%
!! TATGAGAGAGCAAATTTTTA+TGG + chr1_4:16851331-16851350 Msa0153480:five_prime_UTR 25.0%
!! ATGAGAGAGCAAATTTTTAT+GGG + chr1_4:16851332-16851351 Msa0153480:five_prime_UTR 25.0%
!! AGATATGAGTCTGTAATTTT+TGG + chr1_4:16851465-16851484 Msa0153480:five_prime_UTR 25.0%
!! AAAATCTGAAACAAAATTGC+TGG - chr1_4:16851513-16851532 None:intergenic 25.0%
!! TATATGCTTTTGGTAAGTTT+CGG + chr1_4:16852070-16852089 Msa0153480:five_prime_UTR 25.0%
!! AAATAGGTTGAAGTTTCTAT+TGG + chr1_4:16852218-16852237 Msa0153480:intron 25.0%
! CAACACAAAATCATATTATG+AGG - chr1_4:16852426-16852445 None:intergenic 25.0%
! TATCAACTAGATCTAGAAAT+AGG - chr1_4:16852596-16852615 None:intergenic 25.0%
!!! CTAGTTGATAATCTTATTTG+AGG + chr1_4:16852606-16852625 Msa0153480:five_prime_UTR 25.0%
!! TGATTGTTGCTTAAATGATA+TGG + chr1_4:16853037-16853056 Msa0153480:intron 25.0%
! TGAGTATCATAAAATGAAGT+TGG + chr1_4:16853226-16853245 Msa0153480:intron 25.0%
! AGATGTAAGCACATAATATA+TGG + chr1_4:16853493-16853512 Msa0153480:intron 25.0%
! TAATTAGTAGGTGAATTAGT+AGG - chr1_4:16853588-16853607 None:intergenic 25.0%
! CAACATATATGATTATAGCT+AGG - chr1_4:16853848-16853867 None:intergenic 25.0%
! TCCATACAATTATCTTTCAT+TGG + chr1_4:16854105-16854124 Msa0153480:intron 25.0%
! TCCAATGAAAGATAATTGTA+TGG - chr1_4:16854109-16854128 None:intergenic 25.0%
! TGGAAATTAGTTCATGAATT+TGG + chr1_4:16854125-16854144 Msa0153480:intron 25.0%
!! TCCAATGAAAGATGATTTTA+GGG - chr1_4:16854274-16854293 None:intergenic 25.0%
!! TTCCAATGAAAGATGATTTT+AGG - chr1_4:16854275-16854294 None:intergenic 25.0%
! ACAAAGTACATAAAGATATG+CGG + chr1_4:16854458-16854477 Msa0153480:intron 25.0%
! TAAGACATAAATCTTAAAGG+GGG + chr1_4:16854574-16854593 Msa0153480:intron 25.0%
!!! AATTTGGGATGACTAATTTT+TGG - chr1_4:16854872-16854891 None:intergenic 25.0%
!!! AAAATAACAGCTTTTAAGGA+AGG + chr1_4:16855768-16855787 Msa0153480:intron 25.0%
! ACACTAACAACTACTAAATT+AGG + chr1_4:16856049-16856068 Msa0153480:intron 25.0%
!! TAATTGGTTTCTATTTGTCT+TGG + chr1_4:16856091-16856110 Msa0153480:intron 25.0%
!! TTTGGCAGTATTCTTAATTT+TGG + chr1_4:16856239-16856258 Msa0153480:intron 25.0%
!! TTGGCAGTATTCTTAATTTT+GGG + chr1_4:16856240-16856259 Msa0153480:intron 25.0%
!! AACAGGTATTCTTATTTACT+TGG + chr1_4:16856350-16856369 Msa0153480:intron 25.0%
!! ACAGGTATTCTTATTTACTT+GGG + chr1_4:16856351-16856370 Msa0153480:intron 25.0%
!!! TTTTTTATTAGCATTACGGA+GGG - chr1_4:16856435-16856454 None:intergenic 25.0%
!!! TTTTTTTATTAGCATTACGG+AGG - chr1_4:16856436-16856455 None:intergenic 25.0%
! GTATCAACTACAATGATATA+TGG + chr1_4:16856825-16856844 Msa0153480:intron 25.0%
!! GAAAAAGGAATTTTATTCCT+AGG - chr1_4:16857015-16857034 None:intergenic 25.0%
! AGATATCTGCATCATTTAAA+AGG - chr1_4:16857139-16857158 None:intergenic 25.0%
! TAACAAATTGCATCATTATG+AGG + chr1_4:16857233-16857252 Msa0153480:intron 25.0%
! AACAAATTGCATCATTATGA+GGG + chr1_4:16857234-16857253 Msa0153480:intron 25.0%
!!! AAAAGGGAGAAATTTTGTTT+TGG - chr1_4:16857432-16857451 None:intergenic 25.0%
!! AAAACAAAATTTCTCCCTTT+TGG + chr1_4:16857431-16857450 Msa0153480:intron 25.0%
! ACATGTTAAAGATTCCAAAA+GGG - chr1_4:16857448-16857467 None:intergenic 25.0%
!! TCCAAATGAGAAACTATTTT+GGG - chr1_4:16857598-16857617 None:intergenic 25.0%
!!! TTAGCTTTATCCTGATTTTA+GGG + chr1_4:16857641-16857660 Msa0153480:intron 25.0%
! AAAATTGTACAAGAACCATA+TGG - chr1_4:16857694-16857713 None:intergenic 25.0%
!!! TACTTTACTTTTTATTGCCT+TGG + chr1_4:16857774-16857793 Msa0153480:intron 25.0%
!!! ATAACTGCTTTTTAAATTGC+TGG + chr1_4:16858244-16858263 Msa0153480:intron 25.0%
!!! CTTGTTTTTAATTGTGTATC+AGG + chr1_4:16858459-16858478 Msa0153480:intron 25.0%
! ACATGACACTAATTATGTAT+TGG + chr1_4:16859083-16859102 Msa0153480:intron 25.0%
!!! TGATTGTTCAGTTTGATTTT+AGG + chr1_4:16859239-16859258 Msa0153480:intron 25.0%
TTGTGATAGGTAATGTAGTT+TGG + chr1_4:16850380-16850399 Msa0153480:five_prime_UTR 30.0%
! TGAAATTTACCTGTTTGTTG+AGG + chr1_4:16850513-16850532 Msa0153480:five_prime_UTR 30.0%
AAACAAAAACCTCAACAAAC+AGG - chr1_4:16850525-16850544 None:intergenic 30.0%
CATATCATGTTATGTTTAGG+AGG + chr1_4:16850580-16850599 Msa0153480:five_prime_UTR 30.0%
TAACACGATTCATTGCTATA+AGG + chr1_4:16850709-16850728 Msa0153480:five_prime_UTR 30.0%
AACACGATTCATTGCTATAA+GGG + chr1_4:16850710-16850729 Msa0153480:five_prime_UTR 30.0%
GAGTTCAATATGATTCAACT+GGG - chr1_4:16851070-16851089 None:intergenic 30.0%
TGAGTTCAATATGATTCAAC+TGG - chr1_4:16851071-16851090 None:intergenic 30.0%
GTTGAATCATATTGAACTCA+TGG + chr1_4:16851071-16851090 Msa0153480:five_prime_UTR 30.0%
ATGTCTTCGTATCACAATTA+CGG - chr1_4:16851121-16851140 None:intergenic 30.0%
TTACATAGATGATTGACCTT+AGG + chr1_4:16851291-16851310 Msa0153480:five_prime_UTR 30.0%
TACATAGATGATTGACCTTA+GGG + chr1_4:16851292-16851311 Msa0153480:five_prime_UTR 30.0%
! AAATTTTTATGGGAGACTCA+AGG + chr1_4:16851342-16851361 Msa0153480:five_prime_UTR 30.0%
! AATTTTTATGGGAGACTCAA+GGG + chr1_4:16851343-16851362 Msa0153480:five_prime_UTR 30.0%
!! TATGAGTCTGTAATTTTTGG+AGG + chr1_4:16851468-16851487 Msa0153480:five_prime_UTR 30.0%
!! ATGAGTCTGTAATTTTTGGA+GGG + chr1_4:16851469-16851488 Msa0153480:five_prime_UTR 30.0%
GTCCGACAAATAAAAACAAA+TGG - chr1_4:16851765-16851784 None:intergenic 30.0%
AAAAAGCAGGAAGCAAAAAT+CGG - chr1_4:16851855-16851874 None:intergenic 30.0%
AAGAATCCTTATGTCATAGA+AGG - chr1_4:16851908-16851927 None:intergenic 30.0%
AGAACAAAATCCAACTATAG+TGG - chr1_4:16852250-16852269 None:intergenic 30.0%
! ACTATAGTTGGATTTTGTTC+TGG + chr1_4:16852249-16852268 Msa0153480:five_prime_UTR 30.0%
! CTATAGTTGGATTTTGTTCT+GGG + chr1_4:16852250-16852269 Msa0153480:five_prime_UTR 30.0%
ACATATTACAATGTAGCAGT+GGG - chr1_4:16852342-16852361 None:intergenic 30.0%
! TTTGTGTTGCTGATTACAAT+TGG + chr1_4:16852437-16852456 Msa0153480:five_prime_UTR 30.0%
TTATCCTCCAAAATCAAATC+CGG + chr1_4:16852721-16852740 Msa0153480:five_prime_UTR 30.0%
! ATCAAGTACATATGATTTGC+AGG + chr1_4:16852763-16852782 Msa0153480:five_prime_UTR 30.0%
TCAAAAATCTCATTGCAACA+GGG - chr1_4:16852937-16852956 None:intergenic 30.0%
ATCAAAAATCTCATTGCAAC+AGG - chr1_4:16852938-16852957 None:intergenic 30.0%
CACATAAAACCAATGAATGA+TGG - chr1_4:16853113-16853132 None:intergenic 30.0%
!!! CATCATTCATTGGTTTTATG+TGG + chr1_4:16853111-16853130 Msa0153480:intron 30.0%
AAATTAACCAAGTGAATGCA+TGG + chr1_4:16853430-16853449 Msa0153480:intron 30.0%
AAGCACATAATATATGGCAT+AGG + chr1_4:16853499-16853518 Msa0153480:intron 30.0%
CAATTCATGTGAGAATGAAA+CGG + chr1_4:16853777-16853796 Msa0153480:intron 30.0%
ACTTCAATTATTTCGGTCTT+CGG + chr1_4:16853963-16853982 Msa0153480:intron 30.0%
AATTGTATGGATAGATTGCA+AGG - chr1_4:16854096-16854115 None:intergenic 30.0%
GAAATTTGATTGCACATGTT+TGG + chr1_4:16854173-16854192 Msa0153480:intron 30.0%
!! GATTTTAGGGATAAATTGCA+AGG - chr1_4:16854261-16854280 None:intergenic 30.0%
TCCCTAAAATCATCTTTCAT+TGG + chr1_4:16854270-16854289 Msa0153480:intron 30.0%
TAATCATTACGAAATGACAG+TGG + chr1_4:16854370-16854389 Msa0153480:intron 30.0%
ACTGAAACAACAAAACAACA+AGG + chr1_4:16854494-16854513 Msa0153480:intron 30.0%
! AACATGACATCATGTTTTCA+TGG - chr1_4:16854537-16854556 None:intergenic 30.0%
! GTCTTATATAAGGCACATTT+TGG - chr1_4:16854560-16854579 None:intergenic 30.0%
ATGAGAATGAATTTGATCGA+TGG + chr1_4:16854731-16854750 Msa0153480:intron 30.0%
AAATTAGTCATCCCAAATTG+TGG + chr1_4:16854873-16854892 Msa0153480:intron 30.0%
TCAAAAAACAGGAAGACAAA+AGG - chr1_4:16855115-16855134 None:intergenic 30.0%
!! CAAGAGGGGTATTTATTATT+TGG + chr1_4:16855555-16855574 Msa0153480:intron 30.0%
GCTCTTAAGGAAAATATACA+CGG + chr1_4:16855655-16855674 Msa0153480:intron 30.0%
! AAGGTATACACCATTTGTTA+AGG + chr1_4:16855787-16855806 Msa0153480:intron 30.0%
! TATACACCATTTGTTAAGGT+CGG + chr1_4:16855791-16855810 Msa0153480:intron 30.0%
CAGAATATGTTGTCAAATAG+CGG - chr1_4:16855961-16855980 None:intergenic 30.0%
! TTGTTAGTGTTGTTAAGTAG+CGG - chr1_4:16856039-16856058 None:intergenic 30.0%
TATTTGTCTTGGCATTGTTA+AGG + chr1_4:16856102-16856121 Msa0153480:intron 30.0%
GATGAAAATCGGAAAAACAA+AGG - chr1_4:16856132-16856151 None:intergenic 30.0%
GATCACTTCATGATGAAAAT+CGG - chr1_4:16856143-16856162 None:intergenic 30.0%
! TCACTTTCACTTTAGAAGTA+TGG + chr1_4:16856183-16856202 Msa0153480:intron 30.0%
! TGGCAGTATTCTTAATTTTG+GGG + chr1_4:16856241-16856260 Msa0153480:intron 30.0%
ATAAGAATACCTGTTTGACT+TGG - chr1_4:16856345-16856364 None:intergenic 30.0%
ATAAAGGTCGATGTAACTAT+CGG + chr1_4:16856569-16856588 Msa0153480:intron 30.0%
TTGTTAAGCTTATTACTGTC+AGG + chr1_4:16856699-16856718 Msa0153480:intron 30.0%
! TCCTTTTTCTTTTGATGTTG+TGG + chr1_4:16857026-16857045 Msa0153480:intron 30.0%
ACCACAACATCAAAAGAAAA+AGG - chr1_4:16857030-16857049 None:intergenic 30.0%
TTTGTTAACAAATGCCCTTA+GGG - chr1_4:16857342-16857361 None:intergenic 30.0%
CACATGTTAAAGATTCCAAA+AGG - chr1_4:16857449-16857468 None:intergenic 30.0%
AGGATTCCAAAAAGAGAAAA+GGG - chr1_4:16857496-16857515 None:intergenic 30.0%
AAGGATTCCAAAAAGAGAAA+AGG - chr1_4:16857497-16857516 None:intergenic 30.0%
AATCCTTAATATGCAACCTT+AGG + chr1_4:16857510-16857529 Msa0153480:intron 30.0%
ATCCTTAATATGCAACCTTA+GGG + chr1_4:16857511-16857530 Msa0153480:intron 30.0%
!! AAATGAGAAACTATTTTGGG+TGG - chr1_4:16857595-16857614 None:intergenic 30.0%
ACCCAAAATAGTTTCTCATT+TGG + chr1_4:16857594-16857613 Msa0153480:intron 30.0%
! GTCCAAATGAGAAACTATTT+TGG - chr1_4:16857599-16857618 None:intergenic 30.0%
!!! CTTAGCTTTATCCTGATTTT+AGG + chr1_4:16857640-16857659 Msa0153480:intron 30.0%
AATGAAAATGCAATGCCATA+TGG + chr1_4:16857676-16857695 Msa0153480:intron 30.0%
!! GTTATATTTTTGCACAGAAC+TGG + chr1_4:16857828-16857847 Msa0153480:intron 30.0%
TTCTTCCATTGTAATAAGTG+TGG + chr1_4:16857864-16857883 Msa0153480:intron 30.0%
ACTTACCACACTTATTACAA+TGG - chr1_4:16857872-16857891 None:intergenic 30.0%
AAGAACTAAGCAAAAAACAC+AGG - chr1_4:16857910-16857929 None:intergenic 30.0%
TAGTTCTTTAAGTAGCAATG+CGG + chr1_4:16857922-16857941 Msa0153480:intron 30.0%
TAGTACTTATTTGACATCCA+TGG + chr1_4:16857958-16857977 Msa0153480:intron 30.0%
!!! TTGACATCCATGGTTTTTTT+TGG + chr1_4:16857968-16857987 Msa0153480:intron 30.0%
ATGTTACCTCAAAACAAACA+GGG - chr1_4:16858066-16858085 None:intergenic 30.0%
AATGTTACCTCAAAACAAAC+AGG - chr1_4:16858067-16858086 None:intergenic 30.0%
GGTAACATTTACAACTTTCA+TGG + chr1_4:16858078-16858097 Msa0153480:intron 30.0%
AATACTGCATTCATCAATGT+TGG - chr1_4:16858288-16858307 None:intergenic 30.0%
! TTTCATTCAGACAGCTTTTA+TGG - chr1_4:16858360-16858379 None:intergenic 30.0%
AGATGAAGAAAAAGTAGACT+TGG - chr1_4:16858417-16858436 None:intergenic 30.0%
!!! ATTTTGTTTTGATATGGCTC+AGG - chr1_4:16858572-16858591 None:intergenic 30.0%
TGAGCCATATCAAAACAAAA+TGG + chr1_4:16858571-16858590 Msa0153480:CDS 30.0%
!!! CTGACCATTTTGTTTTGATA+TGG - chr1_4:16858578-16858597 None:intergenic 30.0%
!!! TCCGTTGGTTTCTTAATTTT+TGG + chr1_4:16858713-16858732 Msa0153480:intron 30.0%
GCCAAAAATTAAGAAACCAA+CGG - chr1_4:16858717-16858736 None:intergenic 30.0%
!!! AGACTTGCGGTTTATTTTAT+TGG + chr1_4:16858902-16858921 Msa0153480:intron 30.0%
TTATTGGCATCTTAAATCCA+AGG + chr1_4:16858918-16858937 Msa0153480:intron 30.0%
!! TATGTATTGGTTCAACGAAA+TGG + chr1_4:16859096-16859115 Msa0153480:intron 30.0%
!! TTTATTTGTTATGAAGGCAG+TGG + chr1_4:16859139-16859158 Msa0153480:intron 30.0%
ATCATTATTCCAATGTGACT+AGG - chr1_4:16859223-16859242 None:intergenic 30.0%
!! TGTTCAGTTTGATTTTAGGT+TGG + chr1_4:16859243-16859262 Msa0153480:intron 30.0%
!!! GTTCAGTTTGATTTTAGGTT+GGG + chr1_4:16859244-16859263 Msa0153480:intron 30.0%
!!! TTCAGTTTGATTTTAGGTTG+GGG + chr1_4:16859245-16859264 Msa0153480:intron 30.0%
GAAGAATAAGCGATTATGAG+AGG - chr1_4:16850077-16850096 None:intergenic 35.0%
!!! CAAGGAAAAGCACTTTTCTA+CGG - chr1_4:16850136-16850155 None:intergenic 35.0%
! AAGTGCTTTTCCTTGAAGAT+TGG + chr1_4:16850141-16850160 Msa0153480:five_prime_UTR 35.0%
TTTCGAATCTCCAATCTTCA+AGG - chr1_4:16850154-16850173 None:intergenic 35.0%
AGTTTCAGCTTCTTTGGATT+CGG + chr1_4:16850352-16850371 Msa0153480:five_prime_UTR 35.0%
ACACCTTTGATTAGATGTGT+CGG + chr1_4:16850679-16850698 Msa0153480:five_prime_UTR 35.0%
!! ATTGCTATAAGGGTATCAAG+AGG + chr1_4:16850720-16850739 Msa0153480:five_prime_UTR 35.0%
TTGTCTTTAGTAGTGATCCA+TGG + chr1_4:16850766-16850785 Msa0153480:five_prime_UTR 35.0%
TTAAGTTTCTCACCCCATAT+GGG - chr1_4:16850874-16850893 None:intergenic 35.0%
ATTAAGTTTCTCACCCCATA+TGG - chr1_4:16850875-16850894 None:intergenic 35.0%
TGAATAGTCTCACAAGTGTT+TGG + chr1_4:16851011-16851030 Msa0153480:five_prime_UTR 35.0%
GAATAGTCTCACAAGTGTTT+GGG + chr1_4:16851012-16851031 Msa0153480:five_prime_UTR 35.0%
CTTAAGTAAGCTAGTTCAAC+TGG + chr1_4:16851039-16851058 Msa0153480:five_prime_UTR 35.0%
!!! CTCATGGTTTTGAATTGTTG+TGG + chr1_4:16851087-16851106 Msa0153480:five_prime_UTR 35.0%
CAGAATTCTTGCAAAAACTG+CGG - chr1_4:16851169-16851188 None:intergenic 35.0%
ATGACTCAAAATTCTAGACC+TGG + chr1_4:16851196-16851215 Msa0153480:five_prime_UTR 35.0%
TTTACAACACAAACCACTAG+AGG - chr1_4:16851240-16851259 None:intergenic 35.0%
AGGTCAATCATCTATGTAAC+TGG - chr1_4:16851290-16851309 None:intergenic 35.0%
AGCATAAGCATTCTACAACT+GGG - chr1_4:16851441-16851460 None:intergenic 35.0%
!!! TTTTTTTTGCTTCCTGCAGT+TGG - chr1_4:16851545-16851564 None:intergenic 35.0%
! CAAAATTGGCTTCAAACTCT+TGG - chr1_4:16851684-16851703 None:intergenic 35.0%
!!! GAAGCCAATTTTGAAGTTGT+TGG + chr1_4:16851691-16851710 Msa0153480:five_prime_UTR 35.0%
AGCTCCAACAACTTCAAAAT+TGG - chr1_4:16851698-16851717 None:intergenic 35.0%
!!! TTCCTGCTTTTTCTCTACAT+TGG + chr1_4:16851863-16851882 Msa0153480:five_prime_UTR 35.0%
TTCCAATGTAGAGAAAAAGC+AGG - chr1_4:16851868-16851887 None:intergenic 35.0%
TGCAAACCTTCTATGACATA+AGG + chr1_4:16851899-16851918 Msa0153480:five_prime_UTR 35.0%
! TTTTGGTAAGTTTCGGTATC+TGG + chr1_4:16852077-16852096 Msa0153480:five_prime_UTR 35.0%
! GGTTGAAGTTTCTATTGGTT+TGG + chr1_4:16852223-16852242 Msa0153480:intron 35.0%
CTAATTGTATTTACTGCCGA+AGG + chr1_4:16852305-16852324 Msa0153480:five_prime_UTR 35.0%
CATATTACAATGTAGCAGTG+GGG - chr1_4:16852341-16852360 None:intergenic 35.0%
CACATATTACAATGTAGCAG+TGG - chr1_4:16852343-16852362 None:intergenic 35.0%
CACTGCTACATTGTAATATG+TGG + chr1_4:16852341-16852360 Msa0153480:five_prime_UTR 35.0%
CAAGAAATCAACAATGCGTT+TGG + chr1_4:16852474-16852493 Msa0153480:five_prime_UTR 35.0%
! CTAAATTTGTTCGTACATGC+AGG + chr1_4:16852555-16852574 Msa0153480:five_prime_UTR 35.0%
AGAAATAGGCAGTAAGCTTA+AGG - chr1_4:16852582-16852601 None:intergenic 35.0%
! TTTGAGGATAGCTTGTATCA+TGG + chr1_4:16852622-16852641 Msa0153480:five_prime_UTR 35.0%
! TTGAGGATAGCTTGTATCAT+GGG + chr1_4:16852623-16852642 Msa0153480:five_prime_UTR 35.0%
TCATTGCATTCAAATTGCAG+AGG - chr1_4:16852674-16852693 None:intergenic 35.0%
AAGAAACATATGACCGAAGA+AGG + chr1_4:16852695-16852714 Msa0153480:five_prime_UTR 35.0%
!! AAGGATTCCGGATTTGATTT+TGG - chr1_4:16852731-16852750 None:intergenic 35.0%
AAAATCAAATCCGGAATCCT+TGG + chr1_4:16852730-16852749 Msa0153480:five_prime_UTR 35.0%
! TACATATGATTTGCAGGAGA+AGG + chr1_4:16852769-16852788 Msa0153480:five_prime_UTR 35.0%
! ACATATGATTTGCAGGAGAA+GGG + chr1_4:16852770-16852789 Msa0153480:five_prime_UTR 35.0%
AGAAGGGATATATGGAACAT+GGG + chr1_4:16852786-16852805 Msa0153480:five_prime_UTR 35.0%
CAAAAATCTCATTGCAACAG+GGG - chr1_4:16852936-16852955 None:intergenic 35.0%
! ATGAATGATGGTGACAATTG+AGG - chr1_4:16853101-16853120 None:intergenic 35.0%
CAATTGTCACCATCATTCAT+TGG + chr1_4:16853101-16853120 Msa0153480:intron 35.0%
TAGTTCAAGACTCGTATACA+TGG - chr1_4:16853561-16853580 None:intergenic 35.0%
CGTTTCATTCTCACATGAAT+TGG - chr1_4:16853779-16853798 None:intergenic 35.0%
GGTATTCTCTTTGACTATTG+TGG - chr1_4:16854007-16854026 None:intergenic 35.0%
TAGTCAAAGAGAATACCACA+AGG + chr1_4:16854010-16854029 Msa0153480:intron 35.0%
AAGTATTCACTTTCACCTTG+TGG - chr1_4:16854028-16854047 None:intergenic 35.0%
! GAAATTTGCTTGCACATGTT+TGG + chr1_4:16854338-16854357 Msa0153480:intron 35.0%
TCCACAAAAGTCAAACACTT+CGG - chr1_4:16854820-16854839 None:intergenic 35.0%
!! GTGTTTGACTTTTGTGGAAT+TGG + chr1_4:16854822-16854841 Msa0153480:intron 35.0%
!!! ATGACTAATTTTTGGCGTGT+AGG - chr1_4:16854864-16854883 None:intergenic 35.0%
AAGTTAGCACTACGGAAATT+TGG + chr1_4:16855002-16855021 Msa0153480:intron 35.0%
AAATTTGGATGCCCTTGATA+GGG + chr1_4:16855017-16855036 Msa0153480:intron 35.0%
TAGGACTTGAAAATGGATGA+GGG + chr1_4:16855042-16855061 Msa0153480:intron 35.0%
AAGAGATAGATTTACTCCGA+AGG - chr1_4:16855091-16855110 None:intergenic 35.0%
CAGGAAATTCTCTACTTATC+AGG - chr1_4:16855180-16855199 None:intergenic 35.0%
ACTGTGAAAACAAACTTGTG+TGG + chr1_4:16855518-16855537 Msa0153480:intron 35.0%
!! GTTTCATGATTTGCTCAAGA+GGG + chr1_4:16855540-16855559 Msa0153480:intron 35.0%
!! TTTCATGATTTGCTCAAGAG+GGG + chr1_4:16855541-16855560 Msa0153480:intron 35.0%
TTCTGCTAAATAGCACATTG+TGG + chr1_4:16855976-16855995 Msa0153480:intron 35.0%
TTAAGCTTATTACTGTCAGG+AGG + chr1_4:16856702-16856721 Msa0153480:intron 35.0%
AGCATAAGATCTATTGCTCT+AGG - chr1_4:16856761-16856780 None:intergenic 35.0%
CAGCAAAATTGCGTTAATTG+TGG + chr1_4:16856925-16856944 Msa0153480:five_prime_UTR 35.0%
GTTAATTGTGGTGTTTGCAT+GGG + chr1_4:16856937-16856956 Msa0153480:five_prime_UTR 35.0%
!! ATGATGTGAGTATTGATCCT+AGG + chr1_4:16856995-16857014 Msa0153480:intron 35.0%
AAATTCCACAGCCATTACAA+TGG - chr1_4:16857173-16857192 None:intergenic 35.0%
AATTGCATCATTATGAGGGA+TGG + chr1_4:16857238-16857257 Msa0153480:intron 35.0%
! GTTTGTTAACAAATGCCCTT+AGG - chr1_4:16857343-16857362 None:intergenic 35.0%
AATCTTTAACATGTGCCCTT+AGG + chr1_4:16857454-16857473 Msa0153480:intron 35.0%
ATCTTTAACATGTGCCCTTA+GGG + chr1_4:16857455-16857474 Msa0153480:intron 35.0%
!! TCCTGATTTTAGGGATCTTT+TGG + chr1_4:16857650-16857669 Msa0153480:intron 35.0%
TCCAAAAGATCCCTAAAATC+AGG - chr1_4:16857654-16857673 None:intergenic 35.0%
!! ATATTTTTGCACAGAACTGG+CGG + chr1_4:16857831-16857850 Msa0153480:intron 35.0%
!!! TCCATGGTTTTTTTTGGCAT+AGG + chr1_4:16857974-16857993 Msa0153480:intron 35.0%
ACCTATGCCAAAAAAAACCA+TGG - chr1_4:16857978-16857997 None:intergenic 35.0%
TCTGTGATATGTCAAAGGTT+TGG + chr1_4:16858510-16858529 Msa0153480:CDS 35.0%
CTGTGATATGTCAAAGGTTT+GGG + chr1_4:16858511-16858530 Msa0153480:CDS 35.0%
GTGTAAACAACCATCAGATA+GGG - chr1_4:16858614-16858633 None:intergenic 35.0%
AGTGTAAACAACCATCAGAT+AGG - chr1_4:16858615-16858634 None:intergenic 35.0%
TGCCTGTACACATATGAATT+TGG + chr1_4:16858690-16858709 Msa0153480:intron 35.0%
GACCAAATTCATATGTGTAC+AGG - chr1_4:16858695-16858714 None:intergenic 35.0%
TATAATACGTGTTTGTGCCA+AGG + chr1_4:16858777-16858796 Msa0153480:intron 35.0%
TATGGTGATCGATGAAATAG+TGG + chr1_4:16858827-16858846 Msa0153480:intron 35.0%
GATAACACTATTAGTGTCCT+TGG - chr1_4:16858938-16858957 None:intergenic 35.0%
TAGTGTTATCCTTTACATGC+AGG + chr1_4:16858948-16858967 Msa0153480:intron 35.0%
TTATCCTTTACATGCAGGTT+TGG + chr1_4:16858953-16858972 Msa0153480:intron 35.0%
! TTTTTCCACAATCATTGCAC+AGG - chr1_4:16858981-16859000 None:intergenic 35.0%
AAAATGGAAACGGACATTAG+AGG - chr1_4:16859004-16859023 None:intergenic 35.0%
TTTGCGCTACAAAATGGAAA+CGG - chr1_4:16859014-16859033 None:intergenic 35.0%
TTGCGAAGTGATATTCGAGA+GGG - chr1_4:16850041-16850060 None:intergenic 40.0%
GAACTTTCAACTCTTCACGA+CGG - chr1_4:16850206-16850225 None:intergenic 40.0%
TCTGTCAGTTTCAGCTTCTT+TGG + chr1_4:16850346-16850365 Msa0153480:five_prime_UTR 40.0%
!! TTATGTTTAGGAGGCGTTTG+AGG + chr1_4:16850589-16850608 Msa0153480:five_prime_UTR 40.0%
!! TATGTTTAGGAGGCGTTTGA+GGG + chr1_4:16850590-16850609 Msa0153480:five_prime_UTR 40.0%
TCACCGACACATCTAATCAA+AGG - chr1_4:16850685-16850704 None:intergenic 40.0%
!! ATAAGGGTATCAAGAGGTCT+TGG + chr1_4:16850726-16850745 Msa0153480:five_prime_UTR 40.0%
CAAGCTAATCAATGACACCA+TGG - chr1_4:16850786-16850805 None:intergenic 40.0%
TAAGCCCTTACCATGATAAG+CGG + chr1_4:16850895-16850914 Msa0153480:five_prime_UTR 40.0%
ACAACCGCTTATCATGGTAA+GGG - chr1_4:16850902-16850921 None:intergenic 40.0%
TATAGGACAACCGCTTATCA+TGG - chr1_4:16850908-16850927 None:intergenic 40.0%
TAGGTAGAGAAGTCTTTCAC+AGG + chr1_4:16851394-16851413 Msa0153480:five_prime_UTR 40.0%
AGGTAGAGAAGTCTTTCACA+GGG + chr1_4:16851395-16851414 Msa0153480:five_prime_UTR 40.0%
! ACTGGGTAGTAGTTCTACTT+CGG - chr1_4:16851424-16851443 None:intergenic 40.0%
CAGCATAAGCATTCTACAAC+TGG - chr1_4:16851442-16851461 None:intergenic 40.0%
!! ACAAAATTGCTGGTGCTGTT+TGG - chr1_4:16851503-16851522 None:intergenic 40.0%
CAACTGCAGAAATACAGATG+GGG - chr1_4:16851589-16851608 None:intergenic 40.0%
GCAACTGCAGAAATACAGAT+GGG - chr1_4:16851590-16851609 None:intergenic 40.0%
TGCAACTGCAGAAATACAGA+TGG - chr1_4:16851591-16851610 None:intergenic 40.0%
!! CTGTCTTATTTCGTCAAGCT+TGG + chr1_4:16851657-16851676 Msa0153480:five_prime_UTR 40.0%
AAGTTGTTGGAGCTTCGTAT+GGG + chr1_4:16851704-16851723 Msa0153480:five_prime_UTR 40.0%
TTTATTTGTCGGACAGCAAG+AGG + chr1_4:16851771-16851790 Msa0153480:five_prime_UTR 40.0%
!! GAATGGCTTTGATGCTAGTT+TGG + chr1_4:16851793-16851812 Msa0153480:five_prime_UTR 40.0%
TGAACATTCGCACTACTTCA+GGG - chr1_4:16851941-16851960 None:intergenic 40.0%
TTGAACATTCGCACTACTTC+AGG - chr1_4:16851942-16851961 None:intergenic 40.0%
! TGTCCCAAGTGATTTTACCA+TGG + chr1_4:16852023-16852042 Msa0153480:five_prime_UTR 40.0%
GCACCATGGTAAAATCACTT+GGG - chr1_4:16852029-16852048 None:intergenic 40.0%
TGCACCATGGTAAAATCACT+TGG - chr1_4:16852030-16852049 None:intergenic 40.0%
TTACCATGGTGCAGACTATA+TGG + chr1_4:16852037-16852056 Msa0153480:five_prime_UTR 40.0%
! CAACGCTGAACTGCATTTTA+AGG + chr1_4:16852106-16852125 Msa0153480:five_prime_UTR 40.0%
!!! GCTGAACTGCATTTTAAGGT+AGG + chr1_4:16852110-16852129 Msa0153480:intron 40.0%
!! TTGGTTTGGTCCACTATAGT+TGG + chr1_4:16852237-16852256 Msa0153480:five_prime_UTR 40.0%
!! TTTGTTCTGGGAGTTCTTCA+AGG + chr1_4:16852262-16852281 Msa0153480:five_prime_UTR 40.0%
GAGTTCTTCAAGGAATCAAG+TGG + chr1_4:16852272-16852291 Msa0153480:five_prime_UTR 40.0%
! TCTTGTTGTGTTCCTCTCTT+GGG + chr1_4:16852384-16852403 Msa0153480:five_prime_UTR 40.0%
!! GATTCCGGATTTGATTTTGG+AGG - chr1_4:16852728-16852747 None:intergenic 40.0%
TTTGCAGGAGAAGGGATATA+TGG + chr1_4:16852778-16852797 Msa0153480:five_prime_UTR 40.0%
GAGAAGGGATATATGGAACA+TGG + chr1_4:16852785-16852804 Msa0153480:five_prime_UTR 40.0%
! CTTTTGCCTCATTGTGACAA+TGG - chr1_4:16852966-16852985 None:intergenic 40.0%
GTGACAATTGAGGAAAGGAT+TGG - chr1_4:16853091-16853110 None:intergenic 40.0%
! TGATGGTGACAATTGAGGAA+AGG - chr1_4:16853096-16853115 None:intergenic 40.0%
!! ATTCAAGTTGAGTTTCTCCG+AGG + chr1_4:16854599-16854618 Msa0153480:intron 40.0%
!! GGTGATTGAGTTGATGATGA+GGG + chr1_4:16854645-16854664 Msa0153480:intron 40.0%
! TACTGGAGAAGGCATAATTC+AGG - chr1_4:16854685-16854704 None:intergenic 40.0%
AGCTAATCAAACTCCTCGAT+TGG - chr1_4:16854778-16854797 None:intergenic 40.0%
! AAAGTCAAACACTTCGGGTT+CGG - chr1_4:16854814-16854833 None:intergenic 40.0%
CCACAAAAGTCAAACACTTC+GGG - chr1_4:16854819-16854838 None:intergenic 40.0%
TGAACAATACCTTGCCTTCT+TGG - chr1_4:16854959-16854978 None:intergenic 40.0%
!! AAGGCAAGGTATTGTTCACA+TGG + chr1_4:16854961-16854980 Msa0153480:intron 40.0%
!! AGGCAAGGTATTGTTCACAT+GGG + chr1_4:16854962-16854981 Msa0153480:intron 40.0%
GAAATTTGGATGCCCTTGAT+AGG + chr1_4:16855016-16855035 Msa0153480:intron 40.0%
TAGGGAGTAGGACTTGAAAA+TGG + chr1_4:16855035-16855054 Msa0153480:intron 40.0%
GTAGGACTTGAAAATGGATG+AGG + chr1_4:16855041-16855060 Msa0153480:intron 40.0%
CTTGAAAATGGATGAGGGTA+TGG + chr1_4:16855047-16855066 Msa0153480:intron 40.0%
!!! CTTCCTGTTTTTTGAAGACC+CGG + chr1_4:16855120-16855139 Msa0153480:intron 40.0%
TTCTCTACTTATCAGGCTCT+TGG - chr1_4:16855173-16855192 None:intergenic 40.0%
!! TTGAGGATTTGCTGACCTTA+AGG - chr1_4:16855331-16855350 None:intergenic 40.0%
ATCCTCAACATCTGATTCAG+AGG + chr1_4:16855343-16855362 Msa0153480:intron 40.0%
AACCTCTGAATCAGATGTTG+AGG - chr1_4:16855348-16855367 None:intergenic 40.0%
TCAACATCTGATTCAGAGGT+TGG + chr1_4:16855347-16855366 Msa0153480:intron 40.0%
AAATCAGAGAAGGAGCCAAA+GGG - chr1_4:16855380-16855399 None:intergenic 40.0%
AAAATCAGAGAAGGAGCCAA+AGG - chr1_4:16855381-16855400 None:intergenic 40.0%
!!! TCCTTCTCTGATTTTGACTC+TGG + chr1_4:16855386-16855405 Msa0153480:intron 40.0%
AAACCTCAAGCGCAAAATGA+TGG - chr1_4:16855423-16855442 None:intergenic 40.0%
AATTTCCATCGGAAATGCTG+GGG - chr1_4:16855450-16855469 None:intergenic 40.0%
GAATTTCCATCGGAAATGCT+GGG - chr1_4:16855451-16855470 None:intergenic 40.0%
AGAATTTCCATCGGAAATGC+TGG - chr1_4:16855452-16855471 None:intergenic 40.0%
ATGGCTGAGAGAATTTCCAT+CGG - chr1_4:16855461-16855480 None:intergenic 40.0%
!! GGTTTCATGATTTGCTCAAG+AGG + chr1_4:16855539-16855558 Msa0153480:intron 40.0%
TCCTTGTATCGCACATTCAA+CGG - chr1_4:16855588-16855607 None:intergenic 40.0%
! AATCTAGAAGCGTGCTCTTA+AGG + chr1_4:16855642-16855661 Msa0153480:intron 40.0%
GTTTGACCGACCTTAACAAA+TGG - chr1_4:16855800-16855819 None:intergenic 40.0%
ATTGAGCACAGAACAGGAAA+AGG - chr1_4:16856411-16856430 None:intergenic 40.0%
CAGGTGATATGTTCACTTTG+TGG + chr1_4:16856467-16856486 Msa0153480:intron 40.0%
CGTTAATTGTGGTGTTTGCA+TGG + chr1_4:16856936-16856955 Msa0153480:five_prime_UTR 40.0%
AATTGCAGTTACAGACTCAC+TGG - chr1_4:16857093-16857112 None:intergenic 40.0%
AAGCAGCAGTACCATTGTAA+TGG + chr1_4:16857159-16857178 Msa0153480:CDS 40.0%
! GCAGGTATGAATTGATAACC+TGG + chr1_4:16857193-16857212 Msa0153480:intron 40.0%
!!! GATAACCTGGTTTTGTAGTC+TGG + chr1_4:16857206-16857225 Msa0153480:intron 40.0%
ATGTTCCAGACTACAAAACC+AGG - chr1_4:16857214-16857233 None:intergenic 40.0%
GATGGCAACATGTTTCAACA+GGG + chr1_4:16857256-16857275 Msa0153480:intron 40.0%
ATGGCAACATGTTTCAACAG+GGG + chr1_4:16857257-16857276 Msa0153480:intron 40.0%
! GCAAGACCCTTTTCTCTTTT+TGG + chr1_4:16857487-16857506 Msa0153480:intron 40.0%
TGCCCTAAGGTTGCATATTA+AGG - chr1_4:16857516-16857535 None:intergenic 40.0%
!! GAAACTATTTTGGGTGGATG+TGG - chr1_4:16857589-16857608 None:intergenic 40.0%
!! GTGCTAGGCTAGTTTAGTTA+AGG - chr1_4:16857621-16857640 None:intergenic 40.0%
TCAGGATAAAGCTAAGTGCT+AGG - chr1_4:16857636-16857655 None:intergenic 40.0%
!!! TGATTGCCCTGTTTGTTTTG+AGG + chr1_4:16858057-16858076 Msa0153480:intron 40.0%
TTGCTGGAATCTGATTCATG+TGG + chr1_4:16858260-16858279 Msa0153480:intron 40.0%
! TTATGGATTGTATGTCCGCA+CGG - chr1_4:16858343-16858362 None:intergenic 40.0%
GTCAAAGGTTTGGGAGAAAT+TGG + chr1_4:16858520-16858539 Msa0153480:CDS 40.0%
! TTTTGATATGGCTCAGGCAT+TGG - chr1_4:16858566-16858585 None:intergenic 40.0%
!!! TTTTTTCCCACCCTATCTGA+TGG + chr1_4:16858601-16858620 Msa0153480:intron 40.0%
AAACAACCATCAGATAGGGT+GGG - chr1_4:16858610-16858629 None:intergenic 40.0%
TAAACAACCATCAGATAGGG+TGG - chr1_4:16858611-16858630 None:intergenic 40.0%
TTACACTACGCGTATGCTTA+CGG + chr1_4:16858628-16858647 Msa0153480:intron 40.0%
CACATATGAATTTGGTCCGT+TGG + chr1_4:16858698-16858717 Msa0153480:intron 40.0%
TTGTGCCAAGGATGTCTTAT+TGG + chr1_4:16858789-16858808 Msa0153480:intron 40.0%
TAGCACCAATAAGACATCCT+TGG - chr1_4:16858797-16858816 None:intergenic 40.0%
!! AGGATGTCTTATTGGTGCTA+TGG + chr1_4:16858797-16858816 Msa0153480:intron 40.0%
!! ATGTCTTATTGGTGCTATGG+AGG + chr1_4:16858800-16858819 Msa0153480:intron 40.0%
!! TGGTGCTATGGAGGTATATA+TGG + chr1_4:16858809-16858828 Msa0153480:intron 40.0%
! GGCATTTTTGCGCTACAAAA+TGG - chr1_4:16859020-16859039 None:intergenic 40.0%
TGTTGTAGGAATTGCAGTTG+AGG - chr1_4:16859041-16859060 None:intergenic 40.0%
! TCTTGTTTGTCGTGTGTTGT+AGG - chr1_4:16859055-16859074 None:intergenic 40.0%
TACAACACACGACAAACAAG+AGG + chr1_4:16859054-16859073 Msa0153480:intron 40.0%
TACTTGATGCTGTTCTCTCT+TGG + chr1_4:16859162-16859181 Msa0153480:intron 40.0%
GTTGCGAAGTGATATTCGAG+AGG - chr1_4:16850042-16850061 None:intergenic 45.0%
! GGATTCGGTTCTGTTGTGAT+AGG + chr1_4:16850367-16850386 Msa0153480:five_prime_UTR 45.0%
ACATGAATCAGTGTCGTGTC+TGG - chr1_4:16850645-16850664 None:intergenic 45.0%
GGTATCAAGAGGTCTTGGTT+TGG + chr1_4:16850731-16850750 Msa0153480:five_prime_UTR 45.0%
!! ATCAAGAGGTCTTGGTTTGG+AGG + chr1_4:16850734-16850753 Msa0153480:five_prime_UTR 45.0%
GACAACCGCTTATCATGGTA+AGG - chr1_4:16850903-16850922 None:intergenic 45.0%
TTTGATCCATCTCCAACTGC+AGG + chr1_4:16851530-16851549 Msa0153480:five_prime_UTR 45.0%
!! ATGGGGAAGGCATTAAAAGG+AGG - chr1_4:16851572-16851591 None:intergenic 45.0%
!! CAGATGGGGAAGGCATTAAA+AGG - chr1_4:16851575-16851594 None:intergenic 45.0%
TGCAGAAATACAGATGGGGA+AGG - chr1_4:16851585-16851604 None:intergenic 45.0%
CTTGACGAAATAAGACAGCG+TGG - chr1_4:16851655-16851674 None:intergenic 45.0%
GAAGTTGTTGGAGCTTCGTA+TGG + chr1_4:16851703-16851722 Msa0153480:five_prime_UTR 45.0%
GTCATAGAAGGTTTGCAGCA+GGG - chr1_4:16851896-16851915 None:intergenic 45.0%
TGTCATAGAAGGTTTGCAGC+AGG - chr1_4:16851897-16851916 None:intergenic 45.0%
ACTCCATATAGTCTGCACCA+TGG - chr1_4:16852043-16852062 None:intergenic 45.0%
TGGTAAGTTTCGGTATCTGG+AGG + chr1_4:16852080-16852099 Msa0153480:five_prime_UTR 45.0%
! GTCTTGTTGTGTTCCTCTCT+TGG + chr1_4:16852383-16852402 Msa0153480:five_prime_UTR 45.0%
! CTTGTTGTGTTCCTCTCTTG+GGG + chr1_4:16852385-16852404 Msa0153480:five_prime_UTR 45.0%
! TGCTGATTACAATTGGCCTG+CGG + chr1_4:16852444-16852463 Msa0153480:five_prime_UTR 45.0%
!! CAATGCGTTTGGTGTTTACC+TGG + chr1_4:16852485-16852504 Msa0153480:five_prime_UTR 45.0%
! TTGGTGTTTACCTGGCTTGA+TGG + chr1_4:16852493-16852512 Msa0153480:five_prime_UTR 45.0%
! TGGTGTTTACCTGGCTTGAT+GGG + chr1_4:16852494-16852513 Msa0153480:five_prime_UTR 45.0%
TGGAGGATAAACGCCTTCTT+CGG - chr1_4:16852711-16852730 None:intergenic 45.0%
ACTTGATTCTTCTCCAGCCA+AGG - chr1_4:16852750-16852769 None:intergenic 45.0%
TTTGCAGATGCCAACACTAC+CGG + chr1_4:16852890-16852909 Msa0153480:intron 45.0%
TTGCCTCATTGTGACAATGG+CGG - chr1_4:16852963-16852982 None:intergenic 45.0%
CTCTCTGCGATTGAAAACAC+TGG - chr1_4:16853162-16853181 None:intergenic 45.0%
TTGGCATATGCATGCATGTG+TGG + chr1_4:16853245-16853264 Msa0153480:intron 45.0%
TGGCATATGCATGCATGTGT+GGG + chr1_4:16853246-16853265 Msa0153480:intron 45.0%
CTGACTTCCATGCATTCACT+TGG - chr1_4:16853440-16853459 None:intergenic 45.0%
! TTCTCCGAGGTTGATTGAGT+TGG + chr1_4:16854612-16854631 Msa0153480:intron 45.0%
GGAACCAACTCAATCAACCT+CGG - chr1_4:16854619-16854638 None:intergenic 45.0%
!! TGATTGAGTTGGTTCCTCTG+AGG + chr1_4:16854623-16854642 Msa0153480:intron 45.0%
!! GATTGAGTTGGTTCCTCTGA+GGG + chr1_4:16854624-16854643 Msa0153480:intron 45.0%
ATCAACTCAATCACCCTCAG+AGG - chr1_4:16854640-16854659 None:intergenic 45.0%
!! GGGTGATTGAGTTGATGATG+AGG + chr1_4:16854644-16854663 Msa0153480:intron 45.0%
!! AGTTGATGATGAGGGCACAT+TGG + chr1_4:16854653-16854672 Msa0153480:intron 45.0%
!! GTTGATGATGAGGGCACATT+GGG + chr1_4:16854654-16854673 Msa0153480:intron 45.0%
! AAGTCAAACACTTCGGGTTC+GGG - chr1_4:16854813-16854832 None:intergenic 45.0%
!! CCCGAAGTGTTTGACTTTTG+TGG + chr1_4:16854816-16854835 Msa0153480:intron 45.0%
AATACCTTGCCTTCTTGGCT+TGG - chr1_4:16854954-16854973 None:intergenic 45.0%
GGTTGTGCAAGTTAGCACTA+CGG + chr1_4:16854994-16855013 Msa0153480:intron 45.0%
CAAGTCCTACTCCCTATCAA+GGG - chr1_4:16855031-16855050 None:intergenic 45.0%
TCAAGTCCTACTCCCTATCA+AGG - chr1_4:16855032-16855051 None:intergenic 45.0%
GATTAGCAGCTACGATCCTT+CGG + chr1_4:16855072-16855091 Msa0153480:intron 45.0%
TGTCCGGGTCTTCAAAAAAC+AGG - chr1_4:16855126-16855145 None:intergenic 45.0%
AAAACGGTCATAAGCGTGTC+CGG - chr1_4:16855142-16855161 None:intergenic 45.0%
TCTACTTATCAGGCTCTTGG+AGG - chr1_4:16855170-16855189 None:intergenic 45.0%
!! TTTCCTGTCACAGTACTGAC+AGG + chr1_4:16855193-16855212 Msa0153480:intron 45.0%
!! TTCCTGTCACAGTACTGACA+GGG + chr1_4:16855194-16855213 Msa0153480:intron 45.0%
AATTCCTTCACCTCTTGCTC+CGG + chr1_4:16855218-16855237 Msa0153480:intron 45.0%
TGCTGCTGATGAACCTTTAC+CGG - chr1_4:16855240-16855259 None:intergenic 45.0%
!! GCATTCTGAGATGAACGTGA+AGG + chr1_4:16855257-16855276 Msa0153480:intron 45.0%
ACTTCCAAAGCCTTGGAGAA+GGG - chr1_4:16855287-16855306 None:intergenic 45.0%
!! TTCTCCAAGGCTTTGGAAGT+GGG + chr1_4:16855287-16855306 Msa0153480:intron 45.0%
!! GATTTGCTGACCTTAAGGCT+TGG - chr1_4:16855326-16855345 None:intergenic 45.0%
ACATCTGATTCAGAGGTTGG+TGG + chr1_4:16855350-16855369 Msa0153480:intron 45.0%
GCCAGAGTCAAAATCAGAGA+AGG - chr1_4:16855390-16855409 None:intergenic 45.0%
ACCGTTGAATGTGCGATACA+AGG + chr1_4:16855584-16855603 Msa0153480:intron 45.0%
ACGCAAGAATTAGCCGTCAT+GGG - chr1_4:16856220-16856239 None:intergenic 45.0%
AACGCAAGAATTAGCCGTCA+TGG - chr1_4:16856221-16856240 None:intergenic 45.0%
TGACGGCTAATTCTTGCGTT+TGG + chr1_4:16856221-16856240 Msa0153480:intron 45.0%
! ACTTTGTGGCACTGAACAAG+AGG + chr1_4:16856481-16856500 Msa0153480:five_prime_UTR 45.0%
! AGGTTCTTCCAGGTGTTTTG+TGG + chr1_4:16856722-16856741 Msa0153480:intron 45.0%
TCTCACAACCACAAAACACC+TGG - chr1_4:16856733-16856752 None:intergenic 45.0%
CAGTACCATTGTAATGGCTG+TGG + chr1_4:16857165-16857184 Msa0153480:CDS 45.0%
GTAATGGCTGTGGAATTTGC+AGG + chr1_4:16857175-16857194 Msa0153480:CDS 45.0%
GGATGGCAACATGTTTCAAC+AGG + chr1_4:16857255-16857274 Msa0153480:intron 45.0%
AAATGCTAACACGTGCCCTA+AGG + chr1_4:16857324-16857343 Msa0153480:intron 45.0%
AATGCTAACACGTGCCCTAA+GGG + chr1_4:16857325-16857344 Msa0153480:intron 45.0%
! CTTGCTAACTTGTGCCCTAA+GGG - chr1_4:16857472-16857491 None:intergenic 45.0%
! TCTTGCTAACTTGTGCCCTA+AGG - chr1_4:16857473-16857492 None:intergenic 45.0%
! TCTTGCTAACTTGTGCCCTA+AGG - chr1_4:16857473-16857492 None:intergenic 45.0%
! TGAGTTCTGACACAAAGCCA+AGG - chr1_4:16857794-16857813 None:intergenic 45.0%
GATGTCATTGTTATGCCGTG+CGG + chr1_4:16858325-16858344 Msa0153480:intron 45.0%
GAGAGAACATTTCCAGTGAG+TGG + chr1_4:16858381-16858400 Msa0153480:intron 45.0%
ATGCCCTCTCTGTTCAAAGT+CGG + chr1_4:16858487-16858506 Msa0153480:CDS 45.0%
! AGACCGACTTTGAACAGAGA+GGG - chr1_4:16858493-16858512 None:intergenic 45.0%
GTCGGTCTGTGATATGTCAA+AGG + chr1_4:16858505-16858524 Msa0153480:CDS 45.0%
GGTTTGGGAGAAATTGGACA+TGG + chr1_4:16858526-16858545 Msa0153480:CDS 45.0%
TACACTACGCGTATGCTTAC+GGG + chr1_4:16858629-16858648 Msa0153480:intron 45.0%
TTCTAGGTGCATACTGAAGG+AGG - chr1_4:16858878-16858897 None:intergenic 45.0%
TGCTTCTAGGTGCATACTGA+AGG - chr1_4:16858881-16858900 None:intergenic 45.0%
! CACCTAGAAGCATAGACTTG+CGG + chr1_4:16858889-16858908 Msa0153480:intron 45.0%
AACCGCAAGTCTATGCTTCT+AGG - chr1_4:16858894-16858913 None:intergenic 45.0%
GGATCCAAACCTGCATGTAA+AGG - chr1_4:16858960-16858979 None:intergenic 45.0%
TGGATCCTGTGCAATGATTG+TGG + chr1_4:16858973-16858992 Msa0153480:intron 45.0%
CTACAAGGATGCTGTACACT+TGG + chr1_4:16859185-16859204 Msa0153480:intron 45.0%
!! CATATTATAAAAAATATATT+AGG - chr1_4:16852999-16853018 None:intergenic 5.0%
!! TATATTAAATATATGTATTA+AGG + chr1_4:16855856-16855875 Msa0153480:intron 5.0%
GTCGTGTCTGGTGTATCTGT+CGG - chr1_4:16850633-16850652 None:intergenic 50.0%
TAGAGGCCTGTGATAGGAAC+AGG - chr1_4:16851223-16851242 None:intergenic 50.0%
TTCCTATCACAGGCCTCTAG+TGG + chr1_4:16851224-16851243 Msa0153480:five_prime_UTR 50.0%
AACCACTAGAGGCCTGTGAT+AGG - chr1_4:16851229-16851248 None:intergenic 50.0%
TTGCTTCCTGCAGTTGGAGA+TGG - chr1_4:16851539-16851558 None:intergenic 50.0%
TTGTTGGAGCTTCGTATGGG+TGG + chr1_4:16851707-16851726 Msa0153480:five_prime_UTR 50.0%
TGTTGGAGCTTCGTATGGGT+GGG + chr1_4:16851708-16851727 Msa0153480:five_prime_UTR 50.0%
TTGTCGGACAGCAAGAGGAA+TGG + chr1_4:16851776-16851795 Msa0153480:five_prime_UTR 50.0%
TAAGGTAGGTTCGCCCTTTG+TGG + chr1_4:16852124-16852143 Msa0153480:intron 50.0%
! GTGGGGTTTTTCACAGCCTT+CGG - chr1_4:16852324-16852343 None:intergenic 50.0%
GATTTCTTGCATACTGCCGC+AGG - chr1_4:16852463-16852482 None:intergenic 50.0%
! GGTGTTTACCTGGCTTGATG+GGG + chr1_4:16852495-16852514 Msa0153480:five_prime_UTR 50.0%
TTTAGTCACCCCATCAAGCC+AGG - chr1_4:16852506-16852525 None:intergenic 50.0%
! GATAGCTTGTATCATGGGCG+AGG + chr1_4:16852628-16852647 Msa0153480:five_prime_UTR 50.0%
TCAAATCCGGAATCCTTGGC+TGG + chr1_4:16852734-16852753 Msa0153480:five_prime_UTR 50.0%
TCTTCTCCAGCCAAGGATTC+CGG - chr1_4:16852743-16852762 None:intergenic 50.0%
!! CTCTGATTCGGCATCTTCTC+CGG - chr1_4:16852912-16852931 None:intergenic 50.0%
TTGCCGCCATTGTCACAATG+AGG + chr1_4:16852957-16852976 Msa0153480:five_prime_UTR 50.0%
! CAAACTCCTCGATTGGCTGA+GGG - chr1_4:16854771-16854790 None:intergenic 50.0%
! TCAAACTCCTCGATTGGCTG+AGG - chr1_4:16854772-16854791 None:intergenic 50.0%
!! TCCCAAATTGTGGTGTTGCG+AGG + chr1_4:16854883-16854902 Msa0153480:intron 50.0%
CCCTCGCAACACCACAATTT+GGG - chr1_4:16854887-16854906 None:intergenic 50.0%
!! CCCAAATTGTGGTGTTGCGA+GGG + chr1_4:16854884-16854903 Msa0153480:intron 50.0%
!! CCAAATTGTGGTGTTGCGAG+GGG + chr1_4:16854885-16854904 Msa0153480:intron 50.0%
!! TCTTGGCTTGGTTCACCTTC+TGG - chr1_4:16854942-16854961 None:intergenic 50.0%
GAAGGTGAACCAAGCCAAGA+AGG + chr1_4:16854942-16854961 Msa0153480:intron 50.0%
TGAACCAAGCCAAGAAGGCA+AGG + chr1_4:16854947-16854966 Msa0153480:intron 50.0%
! GCTAACTTGCACAACCCAGT+TGG - chr1_4:16854990-16855009 None:intergenic 50.0%
AAACGGTCATAAGCGTGTCC+GGG - chr1_4:16855141-16855160 None:intergenic 50.0%
! GGACACGCTTATGACCGTTT+TGG + chr1_4:16855141-16855160 Msa0153480:intron 50.0%
GCTCTTGGAGGACACCAAAA+CGG - chr1_4:16855158-16855177 None:intergenic 50.0%
TTCCCTGTCAGTACTGTGAC+AGG - chr1_4:16855199-16855218 None:intergenic 50.0%
TTTACCGGAGCAAGAGGTGA+AGG - chr1_4:16855225-16855244 None:intergenic 50.0%
TTCACCTCTTGCTCCGGTAA+AGG + chr1_4:16855224-16855243 Msa0153480:intron 50.0%
TGAACCTTTACCGGAGCAAG+AGG - chr1_4:16855231-16855250 None:intergenic 50.0%
CACTTCCAAAGCCTTGGAGA+AGG - chr1_4:16855288-16855307 None:intergenic 50.0%
!! CTTCTCCAAGGCTTTGGAAG+TGG + chr1_4:16855286-16855305 Msa0153480:intron 50.0%
!! GAGGTTGGTGGTATTCCCTT+TGG + chr1_4:16855362-16855381 Msa0153480:intron 50.0%
CCTCAAGCGCAAAATGATGG+AGG - chr1_4:16855420-16855439 None:intergenic 50.0%
! CCTCCATCATTTTGCGCTTG+AGG + chr1_4:16855417-16855436 Msa0153480:intron 50.0%
TTTGTCCCCAGCATTTCCGA+TGG + chr1_4:16855442-16855461 Msa0153480:intron 50.0%
!! ACCTGTTTGACTTGGTGTCG+AGG - chr1_4:16856337-16856356 None:intergenic 50.0%
! TTGTGGCACTGAACAAGAGG+TGG + chr1_4:16856484-16856503 Msa0153480:intron 50.0%
! TGTGGCACTGAACAAGAGGT+GGG + chr1_4:16856485-16856504 Msa0153480:intron 50.0%
TACTGTCAGGAGGTTCTTCC+AGG + chr1_4:16856712-16856731 Msa0153480:intron 50.0%
TGCATTGCTCCTTCCACACA+GGG - chr1_4:16858034-16858053 None:intergenic 50.0%
ATGCATTGCTCCTTCCACAC+AGG - chr1_4:16858035-16858054 None:intergenic 50.0%
! CAGACCGACTTTGAACAGAG+AGG - chr1_4:16858494-16858513 None:intergenic 50.0%
GTGCATACTGAAGGAGGAGA+AGG - chr1_4:16858872-16858891 None:intergenic 50.0%
GCTGTTCTCTCTTGGCTACA+AGG + chr1_4:16859170-16859189 Msa0153480:intron 50.0%
TTCAACGCGCCTAGTCACAT+TGG + chr1_4:16859211-16859230 Msa0153480:intron 50.0%
!! GAGGTCTTGGTTTGGAGGCA+AGG + chr1_4:16850739-16850758 Msa0153480:five_prime_UTR 55.0%
GCGGTGACTGTGTGACATCA+AGG - chr1_4:16851150-16851169 None:intergenic 55.0%
CCTGTGATAGGAACAGGACC+AGG - chr1_4:16851217-16851236 None:intergenic 55.0%
CCTGGTCCTGTTCCTATCAC+AGG + chr1_4:16851214-16851233 Msa0153480:five_prime_UTR 55.0%
GTTGTGTTCCTCTCTTGGGG+TGG + chr1_4:16852388-16852407 Msa0153480:five_prime_UTR 55.0%
! TCTCTTGGGGTGGTGGTGAT+CGG + chr1_4:16852398-16852417 Msa0153480:five_prime_UTR 55.0%
AGCTTGTATCATGGGCGAGG+TGG + chr1_4:16852631-16852650 Msa0153480:five_prime_UTR 55.0%
GGCATCTTCTCCGGTAGTGT+TGG - chr1_4:16852903-16852922 None:intergenic 55.0%
CGGAGAAGATGCCGAATCAG+AGG + chr1_4:16852910-16852929 Msa0153480:five_prime_UTR 55.0%
TGCAACAGGGGCCTCTGATT+CGG - chr1_4:16852924-16852943 None:intergenic 55.0%
CCCCTCGCAACACCACAATT+TGG - chr1_4:16854888-16854907 None:intergenic 55.0%
! GGTGTTGCGAGGGGTGAATT+TGG + chr1_4:16854894-16854913 Msa0153480:intron 55.0%
ATCCCTCCATAGCCACCAGA+AGG + chr1_4:16854924-16854943 Msa0153480:intron 55.0%
CACCTTCTGGTGGCTATGGA+GGG - chr1_4:16854929-16854948 None:intergenic 55.0%
TCACCTTCTGGTGGCTATGG+AGG - chr1_4:16854930-16854949 None:intergenic 55.0%
GGTTCACCTTCTGGTGGCTA+TGG - chr1_4:16854933-16854952 None:intergenic 55.0%
!! TGGCTTGGTTCACCTTCTGG+TGG - chr1_4:16854939-16854958 None:intergenic 55.0%
TTGTTCACATGGGCGCCAAC+TGG + chr1_4:16854972-16854991 Msa0153480:intron 55.0%
TGTTCACATGGGCGCCAACT+GGG + chr1_4:16854973-16854992 Msa0153480:intron 55.0%
GGATGCCCTTGATAGGGAGT+AGG + chr1_4:16855023-16855042 Msa0153480:intron 55.0%
TGAAGGTTCGCCCTTCTCCA+AGG + chr1_4:16855274-16855293 Msa0153480:intron 55.0%
TTCGCCCTTCTCCAAGGCTT+TGG + chr1_4:16855280-16855299 Msa0153480:intron 55.0%
AACGCCCACTTCCAAAGCCT+TGG - chr1_4:16855294-16855313 None:intergenic 55.0%
!! AAGGCTTTGGAAGTGGGCGT+TGG + chr1_4:16855293-16855312 Msa0153480:intron 55.0%
!! AGGCTTTGGAAGTGGGCGTT+GGG + chr1_4:16855294-16855313 Msa0153480:intron 55.0%
! GCGCAAAATGATGGAGGAGC+AGG - chr1_4:16855414-16855433 None:intergenic 55.0%
! GGCTTCAGAGTGTCCCATGA+CGG + chr1_4:16856204-16856223 Msa0153480:intron 55.0%
GCCTCGACACCAAGTCAAAC+AGG + chr1_4:16856333-16856352 Msa0153480:five_prime_UTR 55.0%
!! GAGGGCATTGAGCACAGAAC+AGG - chr1_4:16856417-16856436 None:intergenic 55.0%
GCATTGCTCCTTCCACACAG+GGG - chr1_4:16858033-16858052 None:intergenic 55.0%
GTGTTCCTCTCTTGGGGTGG+TGG + chr1_4:16852391-16852410 Msa0153480:five_prime_UTR 60.0%
GATCACCACCACCCCAAGAG+AGG - chr1_4:16852399-16852418 None:intergenic 60.0%
TCTGCACCCTCAGCCAATCG+AGG + chr1_4:16854762-16854781 Msa0153480:intron 60.0%
!! CTTTGGAAGTGGGCGTTGGG+CGG + chr1_4:16855297-16855316 Msa0153480:intron 60.0%
TGGGCGGAAGCCAAGCCTTA+AGG + chr1_4:16855313-16855332 Msa0153480:intron 60.0%
AGCGGCTAGCACTGTCGTAG+CGG - chr1_4:16855943-16855962 None:intergenic 60.0%
GAGAGACAGTCACCCCTGTG+TGG + chr1_4:16858018-16858037 Msa0153480:intron 60.0%
GACAGTCACCCCTGTGTGGA+AGG + chr1_4:16858022-16858041 Msa0153480:intron 60.0%
GGAGCTCTGTGACCACTCAC+TGG - chr1_4:16858396-16858415 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 16850005 16859272 16850005 ID=Msa0153480;Name=Msa0153480
chr1_4 mRNA 16850005 16859272 16850005 ID=Msa0153480-mRNA-1;Parent=Msa0153480;Name=Msa0153480-mRNA-1;_AED=0.15;_eAED=0.15;_QI=2919|0.63|0.75|0.91|0.63|0.66|12|0|68
chr1_4 exon 16850005 16850414 16850005 ID=Msa0153480-mRNA-1:exon:6431;Parent=Msa0153480-mRNA-1
chr1_4 exon 16850436 16852127 16850436 ID=Msa0153480-mRNA-1:exon:6432;Parent=Msa0153480-mRNA-1
chr1_4 exon 16852224 16852807 16852224 ID=Msa0153480-mRNA-1:exon:6433;Parent=Msa0153480-mRNA-1
chr1_4 exon 16852897 16852984 16852897 ID=Msa0153480-mRNA-1:exon:6434;Parent=Msa0153480-mRNA-1
chr1_4 exon 16856295 16856354 16856295 ID=Msa0153480-mRNA-1:exon:6435;Parent=Msa0153480-mRNA-1
chr1_4 exon 16856470 16856502 16856470 ID=Msa0153480-mRNA-1:exon:6436;Parent=Msa0153480-mRNA-1
chr1_4 exon 16856922 16856999 16856922 ID=Msa0153480-mRNA-1:exon:6437;Parent=Msa0153480-mRNA-1
chr1_4 exon 16857153 16857196 16857153 ID=Msa0153480-mRNA-1:exon:6438;Parent=Msa0153480-mRNA-1
chr1_4 exon 16857937 16857943 16857937 ID=Msa0153480-mRNA-1:exon:6439;Parent=Msa0153480-mRNA-1
chr1_4 exon 16858481 16858592 16858481 ID=Msa0153480-mRNA-1:exon:6440;Parent=Msa0153480-mRNA-1
chr1_4 exon 16859155 16859160 16859155 ID=Msa0153480-mRNA-1:exon:6441;Parent=Msa0153480-mRNA-1
chr1_4 exon 16859261 16859272 16859261 ID=Msa0153480-mRNA-1:exon:6442;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16850005 16850414 16850005 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16850436 16852127 16850436 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16852224 16852807 16852224 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16852897 16852984 16852897 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16856295 16856354 16856295 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16856470 16856502 16856470 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 five_prime_UTR 16856922 16856973 16856922 ID=Msa0153480-mRNA-1:five_prime_utr;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16856974 16856999 16856974 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16857153 16857196 16857153 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16857937 16857943 16857937 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16858481 16858592 16858481 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16859155 16859160 16859155 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
chr1_4 CDS 16859261 16859272 16859261 ID=Msa0153480-mRNA-1:cds;Parent=Msa0153480-mRNA-1
Gene Sequence

>Msa0153480

ATGCATGCAAGCTCTACGACGATGATATATCTAAGCAGCAGTACCATTGTAATGGCTGTGGAATTTGCAGCAATGCGGTTCACATGCCCTCTCTGTTCAAAGTCGGTCTGTGATATGTCAAAGGTTTGGGAGAAATTGGACATGGAGATTGCTGCTACACCAATGCCTGAGCCATATCAAAACAAAATGGCAGTGGTTGGGGAGTAA
Protein sequence

>Msa0153480

MHASSTTMIYLSSSTIVMAVEFAAMRFTCPLCSKSVCDMSKVWEKLDMEIAATPMPEPYQNKMAVVGE*