Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0059920 | XP_024631268.1 | 98.899 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0059920 | sp|O49285|ACR3_ARATH | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0059920 | A0A396JL16 | 98.899 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 0.0 | 934 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010540 | Msa0059920 | 0.834476 | 2.932926e-56 | -8.615850e-47 |
| Msa0059920 | Msa0104820 | 0.866352 | 3.036727e-65 | -8.615850e-47 |
| Msa0059920 | Msa0151160 | 0.893242 | 7.544023e-75 | -8.615850e-47 |
| Msa0059920 | Msa0272600 | 0.803264 | 3.787149e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0059920 | MtrunA17_Chr1g0159541 | 98.899 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 0.0 | 934 |
| Msa0059920 | MtrunA17_Chr3g0125661 | 81.057 | 454 | 78 | 6 | 1 | 453 | 1 | 447 | 0.0 | 745 |
| Msa0059920 | MtrunA17_Chr5g0420221 | 53.409 | 440 | 183 | 7 | 8 | 446 | 16 | 434 | 6.89e-154 | 444 |
| Msa0059920 | MtrunA17_Chr7g0222461 | 51.461 | 445 | 203 | 5 | 9 | 453 | 10 | 441 | 4.64e-153 | 442 |
| Msa0059920 | MtrunA17_Chr7g0224571 | 48.315 | 445 | 219 | 6 | 9 | 452 | 1 | 435 | 6.86e-141 | 410 |
| Msa0059920 | MtrunA17_Chr4g0056741 | 46.387 | 429 | 190 | 7 | 6 | 426 | 3 | 399 | 6.14e-131 | 385 |
| Msa0059920 | MtrunA17_Chr5g0400941 | 46.437 | 435 | 214 | 8 | 10 | 432 | 10 | 437 | 1.98e-128 | 380 |
| Msa0059920 | MtrunA17_Chr5g0398581 | 44.592 | 453 | 222 | 8 | 6 | 453 | 3 | 431 | 5.21e-128 | 378 |
| Msa0059920 | MtrunA17_Chr4g0054261 | 40.793 | 429 | 237 | 4 | 7 | 420 | 26 | 452 | 1.99e-110 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0059920 | AT1G76990.4 | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Msa0059920 | AT1G76990.5 | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Msa0059920 | AT1G76990.2 | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Msa0059920 | AT1G76990.3 | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Msa0059920 | AT1G76990.1 | 69.697 | 462 | 121 | 9 | 1 | 453 | 1 | 452 | 0.0 | 655 |
| Msa0059920 | AT1G69040.2 | 51.786 | 448 | 193 | 7 | 9 | 450 | 11 | 441 | 2.85e-149 | 433 |
| Msa0059920 | AT1G69040.1 | 51.786 | 448 | 193 | 7 | 9 | 450 | 7 | 437 | 3.23e-149 | 432 |
| Msa0059920 | AT5G25320.1 | 49.660 | 441 | 194 | 7 | 1 | 414 | 1 | 440 | 2.93e-147 | 429 |
| Msa0059920 | AT2G03730.2 | 49.782 | 458 | 206 | 9 | 4 | 451 | 3 | 446 | 8.90e-145 | 421 |
| Msa0059920 | AT2G03730.1 | 49.782 | 458 | 206 | 9 | 4 | 451 | 3 | 446 | 8.90e-145 | 421 |
| Msa0059920 | AT3G01990.7 | 50.000 | 406 | 188 | 5 | 10 | 415 | 17 | 407 | 5.52e-136 | 399 |
| Msa0059920 | AT3G01990.5 | 50.000 | 406 | 188 | 5 | 10 | 415 | 17 | 407 | 5.52e-136 | 399 |
| Msa0059920 | AT3G01990.10 | 50.000 | 406 | 188 | 5 | 10 | 415 | 3 | 393 | 1.03e-135 | 397 |
| Msa0059920 | AT3G01990.1 | 50.000 | 406 | 188 | 5 | 10 | 415 | 3 | 393 | 1.03e-135 | 397 |
| Msa0059920 | AT3G01990.6 | 50.000 | 406 | 188 | 5 | 10 | 415 | 17 | 407 | 1.07e-135 | 398 |
| Msa0059920 | AT3G01990.11 | 50.000 | 406 | 188 | 5 | 10 | 415 | 3 | 393 | 1.35e-135 | 397 |
| Msa0059920 | AT5G25320.3 | 48.507 | 402 | 181 | 5 | 38 | 414 | 1 | 401 | 4.54e-128 | 379 |
| Msa0059920 | AT4G22780.1 | 47.407 | 405 | 188 | 4 | 12 | 415 | 9 | 389 | 5.82e-125 | 370 |
| Msa0059920 | AT4G22780.2 | 47.407 | 405 | 188 | 4 | 12 | 415 | 9 | 389 | 5.82e-125 | 370 |
| Msa0059920 | AT1G12420.1 | 45.476 | 420 | 206 | 8 | 8 | 427 | 6 | 402 | 3.34e-120 | 358 |
| Msa0059920 | AT5G25320.2 | 47.059 | 374 | 170 | 7 | 1 | 347 | 1 | 373 | 1.11e-112 | 337 |
| Msa0059920 | AT5G65890.1 | 40.638 | 470 | 252 | 7 | 7 | 454 | 8 | 472 | 2.89e-112 | 339 |
| Msa0059920 | AT5G65890.3 | 40.638 | 470 | 252 | 7 | 7 | 454 | 8 | 472 | 2.89e-112 | 339 |
| Msa0059920 | AT3G01990.9 | 48.688 | 343 | 161 | 5 | 10 | 352 | 3 | 330 | 1.43e-107 | 322 |
| Msa0059920 | AT3G01990.4 | 48.688 | 343 | 161 | 5 | 10 | 352 | 17 | 344 | 1.46e-107 | 323 |
| Msa0059920 | AT3G01990.2 | 49.112 | 338 | 157 | 5 | 10 | 347 | 17 | 339 | 2.38e-107 | 322 |
| Msa0059920 | AT1G12420.2 | 43.182 | 352 | 178 | 7 | 76 | 427 | 1 | 330 | 1.65e-91 | 282 |
| Msa0059920 | AT5G65890.4 | 38.353 | 425 | 235 | 7 | 52 | 454 | 1 | 420 | 7.74e-91 | 282 |
| Msa0059920 | AT5G65890.2 | 38.353 | 425 | 235 | 7 | 52 | 454 | 1 | 420 | 7.74e-91 | 282 |
| Msa0059920 | AT3G01990.8 | 46.688 | 317 | 154 | 5 | 10 | 326 | 3 | 304 | 4.00e-88 | 271 |
| Msa0059920 | AT3G01990.3 | 46.688 | 317 | 154 | 5 | 10 | 326 | 17 | 318 | 4.43e-88 | 271 |
| Msa0059920 | AT5G65890.5 | 36.782 | 348 | 201 | 5 | 124 | 454 | 13 | 358 | 1.79e-67 | 220 |
Find 171 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAACTCTTCACACCTTC+TGG | 0.132030 | 1_2:-17436967 | None:intergenic |
| TTGATTCTCCTCCCTCTTTC+AGG | 0.151257 | 1_2:+17437388 | Msa0059920:CDS |
| AATACGTTCTATTTCGATAT+TGG | 0.184866 | 1_2:-17437412 | None:intergenic |
| TGAATCTTGGTCCAATTTAA+TGG | 0.187172 | 1_2:-17430924 | None:intergenic |
| TTCTGATGGTAGTTGGTTTA+TGG | 0.190044 | 1_2:+17436160 | Msa0059920:CDS |
| GACAATATCTTCCATTAAAT+TGG | 0.239583 | 1_2:+17430913 | Msa0059920:five_prime_UTR |
| GCCCATCCTCGAGAGGTTTC+TGG | 0.246221 | 1_2:-17439692 | None:intergenic |
| CACGACTTCCAGAAGAATTC+CGG | 0.255581 | 1_2:-17436090 | None:intergenic |
| AACATTTGGGTTGGGGCATT+TGG | 0.261897 | 1_2:-17430988 | None:intergenic |
| ATACGTTCTATTTCGATATT+GGG | 0.265506 | 1_2:-17437411 | None:intergenic |
| AGGTTCTTGACTTAATTAAA+AGG | 0.270566 | 1_2:+17439749 | Msa0059920:exon |
| CAATAAACCCGGAATTCTTC+TGG | 0.280162 | 1_2:+17436082 | Msa0059920:CDS |
| ATGACAAACAATAGAACATT+TGG | 0.294565 | 1_2:-17431002 | None:intergenic |
| TATAATCCTTAGCCAATCTT+TGG | 0.301986 | 1_2:+17431110 | Msa0059920:five_prime_UTR |
| CCCAACTCTTCACACCTTCT+GGG | 0.315377 | 1_2:-17436966 | None:intergenic |
| GAAGCACTGCGTAAAGAAAT+TGG | 0.317035 | 1_2:+17439620 | Msa0059920:CDS |
| GCTAGAGTAAGCTTCTTCTT+TGG | 0.317293 | 1_2:+17439713 | Msa0059920:CDS |
| CCAAATGTTGTTTGCTGATA+GGG | 0.317607 | 1_2:+17437326 | Msa0059920:CDS |
| TCATTTACAAATCACAAAAT+AGG | 0.319364 | 1_2:-17439787 | None:intergenic |
| CTAGAGTAAGCTTCTTCTTT+GGG | 0.326628 | 1_2:+17439714 | Msa0059920:CDS |
| TCTAATTCGCAGGGTCTCTA+TGG | 0.333159 | 1_2:+17435500 | Msa0059920:intron |
| TTGTTGCATCATTGACATAA+AGG | 0.334530 | 1_2:-17437155 | None:intergenic |
| ATAGAACGTATTGAAGAAAA+AGG | 0.338531 | 1_2:+17437423 | Msa0059920:CDS |
| ACCAAATGTTGTTTGCTGAT+AGG | 0.350530 | 1_2:+17437325 | Msa0059920:CDS |
| CCCTATCAGCAAACAACATT+TGG | 0.356933 | 1_2:-17437326 | None:intergenic |
| TGTGAAGAATTAAGAGTCTT+GGG | 0.377971 | 1_2:+17431137 | Msa0059920:five_prime_UTR |
| TGAATAAAGCTCTTGAATCT+TGG | 0.378320 | 1_2:-17430937 | None:intergenic |
| ATTTAGTCCTTTCTCTCCTA+TGG | 0.378855 | 1_2:-17439546 | None:intergenic |
| CTTCTTCTTTGGGAACTTGT+TGG | 0.378986 | 1_2:+17439724 | Msa0059920:CDS |
| GGTGAAACCCATGGAGAAAC+TGG | 0.381534 | 1_2:-17437277 | None:intergenic |
| TCGAGAGGTTTCTGGTGCTT+TGG | 0.382279 | 1_2:-17439684 | None:intergenic |
| TGAGATGGACATGTTAAGAT+AGG | 0.383409 | 1_2:-17439932 | None:intergenic |
| CAGCTGCAATCACATTGAAT+TGG | 0.392381 | 1_2:-17437098 | None:intergenic |
| AACATCTTACAAGCATTGTT+TGG | 0.393303 | 1_2:-17439892 | None:intergenic |
| TCTGGGCTCTTGCGGCCCTT+TGG | 0.393975 | 1_2:-17436949 | None:intergenic |
| AACAATAGAACATTTGGGTT+GGG | 0.394214 | 1_2:-17430996 | None:intergenic |
| GGGTTTCACCTTCACCCATA+TGG | 0.396055 | 1_2:+17437290 | Msa0059920:CDS |
| CTGAAGTTTGGACTCATAAC+AGG | 0.401956 | 1_2:+17437118 | Msa0059920:CDS |
| TCTGGTGCTTTGGTGTTGGC+TGG | 0.406285 | 1_2:-17439674 | None:intergenic |
| TCTTCACATCCTCCAAAGAT+TGG | 0.411746 | 1_2:-17431122 | None:intergenic |
| ACGACTTCCAGAAGAATTCC+GGG | 0.412177 | 1_2:-17436089 | None:intergenic |
| ACATATCTTCTGATGGTAGT+TGG | 0.412715 | 1_2:+17436153 | Msa0059920:CDS |
| GGTGTAGCCTTCTGTCCATA+TGG | 0.416835 | 1_2:-17437305 | None:intergenic |
| ATGTGATTGCAGCTGAAGTT+TGG | 0.418119 | 1_2:+17437106 | Msa0059920:CDS |
| ATAAATTATTATGCACTACT+TGG | 0.419389 | 1_2:+17430825 | Msa0059920:five_prime_UTR |
| ATTGTTTGGTTTAAAACAAA+AGG | 0.420375 | 1_2:-17439878 | None:intergenic |
| ATCAGAAGATATGTAAGCTT+TGG | 0.421120 | 1_2:-17436144 | None:intergenic |
| GCCCAGAAGGTGTGAAGAGT+TGG | 0.421778 | 1_2:+17436965 | Msa0059920:CDS |
| TGGGTTGGGGCATTTGGCAA+TGG | 0.425220 | 1_2:-17430982 | None:intergenic |
| AGAACGGCTTAACAGTTTGT+AGG | 0.425881 | 1_2:+17439510 | Msa0059920:CDS |
| CATTGAATTGGAAGCTCGCC+AGG | 0.426882 | 1_2:-17437086 | None:intergenic |
| GGTTTCTGGTGCTTTGGTGT+TGG | 0.431935 | 1_2:-17439678 | None:intergenic |
| AATACGTGGAAGTTTATCAT+TGG | 0.443181 | 1_2:+17430848 | Msa0059920:five_prime_UTR |
| TGACAAACAATAGAACATTT+GGG | 0.445347 | 1_2:-17431001 | None:intergenic |
| ACTTGGACAGTGCTTGAACT+TGG | 0.448825 | 1_2:+17439854 | Msa0059920:three_prime_UTR |
| ATGTGAAGAATTAAGAGTCT+TGG | 0.452701 | 1_2:+17431136 | Msa0059920:five_prime_UTR |
| AATTATTGACTTCATTGAAA+AGG | 0.455728 | 1_2:+17436466 | Msa0059920:CDS |
| TCGTACTCAGGATCAAAGTA+TGG | 0.456449 | 1_2:-17435026 | None:intergenic |
| CATACAGCCATTGAGCTCAT+TGG | 0.456613 | 1_2:+17437024 | Msa0059920:CDS |
| CCCAGAAGGTGTGAAGAGTT+GGG | 0.459787 | 1_2:+17436966 | Msa0059920:CDS |
| TCTTTGGGAACTTGTTGGAA+AGG | 0.462241 | 1_2:+17439729 | Msa0059920:CDS |
| CATGCCTCCATCTCATCTGA+AGG | 0.466025 | 1_2:+17437537 | Msa0059920:CDS |
| TGAAGAGTTGGGAAGGCAAA+CGG | 0.470682 | 1_2:+17436977 | Msa0059920:CDS |
| GGCTTAACAGTTTGTAGGGC+AGG | 0.471990 | 1_2:+17439515 | Msa0059920:CDS |
| GTCCAGGACCAGTTTCTCCA+TGG | 0.473521 | 1_2:+17437269 | Msa0059920:CDS |
| TCCAGGACCAGTTTCTCCAT+GGG | 0.475456 | 1_2:+17437270 | Msa0059920:CDS |
| GGTTCTTGACTTAATTAAAA+GGG | 0.477530 | 1_2:+17439750 | Msa0059920:exon |
| ACACTGAAGGGGAGAAAGAA+AGG | 0.477680 | 1_2:+17438476 | Msa0059920:CDS |
| AATCCTTAGCCAATCTTTGG+AGG | 0.479682 | 1_2:+17431113 | Msa0059920:five_prime_UTR |
| TCAATGATGTTCATATCCAC+AGG | 0.481133 | 1_2:-17439599 | None:intergenic |
| TTGCTGAAGTTCTCGTACTC+AGG | 0.482576 | 1_2:-17435038 | None:intergenic |
| GTTGAATGGCAAAAGTTTGT+TGG | 0.483753 | 1_2:+17435003 | Msa0059920:exon |
| TTATGAAGTCAAGGTCTGTC+AGG | 0.488033 | 1_2:-17436118 | None:intergenic |
| CGGGTTGGCATTCACTCCAT+TGG | 0.490248 | 1_2:+17436997 | Msa0059920:CDS |
| ACCCATGGAGAAACTGGTCC+TGG | 0.492418 | 1_2:-17437271 | None:intergenic |
| GTCTGAGATATCAGCTGTCC+TGG | 0.493937 | 1_2:+17437068 | Msa0059920:CDS |
| GTGTAGCCTTCTGTCCATAT+GGG | 0.494278 | 1_2:-17437304 | None:intergenic |
| GTGGAAGTTTATCATTGGCT+TGG | 0.498115 | 1_2:+17430853 | Msa0059920:five_prime_UTR |
| AAGCTCAACCACATCCTTCG+TGG | 0.501497 | 1_2:+17437225 | Msa0059920:CDS |
| TCACATTGACCATCACAGTC+TGG | 0.502894 | 1_2:-17439643 | None:intergenic |
| GACATTTGAAGTATATATGC+AGG | 0.503272 | 1_2:+17440028 | Msa0059920:three_prime_UTR |
| GAAGAGTTGGGAAGGCAAAC+GGG | 0.503318 | 1_2:+17436978 | Msa0059920:CDS |
| TTGAATCATCATCAACAGCT+TGG | 0.504029 | 1_2:-17437179 | None:intergenic |
| ATTCTTAGGAGTACTTCATC+AGG | 0.510626 | 1_2:+17438431 | Msa0059920:intron |
| TTCGATATTGGGCCTGAAAG+AGG | 0.510982 | 1_2:-17437400 | None:intergenic |
| ACATGTTAAGATAGGGAAGA+TGG | 0.511868 | 1_2:-17439924 | None:intergenic |
| TGAACATTTAAATAGGCTCT+AGG | 0.512518 | 1_2:+17436925 | Msa0059920:intron |
| CCATGATTGTACACTGATCA+AGG | 0.512717 | 1_2:+17435536 | Msa0059920:CDS |
| TCGATATTGGGCCTGAAAGA+GGG | 0.514165 | 1_2:-17437399 | None:intergenic |
| GACGAGAGAAGGTGGTTGAA+TGG | 0.517921 | 1_2:+17434989 | Msa0059920:exon |
| AGCCATTGAGCTCATTGGTC+GGG | 0.518001 | 1_2:+17437029 | Msa0059920:CDS |
| CATCCTCCAAAGATTGGCTA+AGG | 0.518052 | 1_2:-17431116 | None:intergenic |
| ATGCATACCTGTGAAGCATA+AGG | 0.520785 | 1_2:-17437561 | None:intergenic |
| TGAAGGGCCTTATGCTTCAC+AGG | 0.521336 | 1_2:+17437554 | Msa0059920:CDS |
| CCTTGATCAGTGTACAATCA+TGG | 0.522276 | 1_2:-17435536 | None:intergenic |
| CACCAGAAACCTCTCGAGGA+TGG | 0.523676 | 1_2:+17439690 | Msa0059920:CDS |
| CTCATTGGTCGGGACCGCCC+AGG | 0.524150 | 1_2:+17437039 | Msa0059920:CDS |
| AAACAATAGAACATTTGGGT+TGG | 0.530854 | 1_2:-17430997 | None:intergenic |
| AAGTTGTTGTGTGTCAAACT+TGG | 0.534227 | 1_2:+17439837 | Msa0059920:three_prime_UTR |
| ACAATAGAACATTTGGGTTG+GGG | 0.535225 | 1_2:-17430995 | None:intergenic |
| TTCTATGTGAGAGATGCATA+TGG | 0.536976 | 1_2:+17439572 | Msa0059920:CDS |
| GAATGTGTTGTATTTATACA+AGG | 0.540204 | 1_2:+17440000 | Msa0059920:three_prime_UTR |
| TAGTGTGAGATGCAAAGATC+GGG | 0.541924 | 1_2:+17437458 | Msa0059920:CDS |
| GATGGTAGTTGGTTTATGGA+TGG | 0.543454 | 1_2:+17436164 | Msa0059920:CDS |
| GATATCTCAGACAAAAGACC+TGG | 0.545024 | 1_2:-17437057 | None:intergenic |
| TACTTCATCAGGCACGTGGA+TGG | 0.545747 | 1_2:+17438442 | Msa0059920:CDS |
| GTGTCAACCATAGGAGAGAA+AGG | 0.546097 | 1_2:+17439539 | Msa0059920:CDS |
| AGCAATTTATTGACGAGAGA+AGG | 0.548549 | 1_2:+17434978 | Msa0059920:five_prime_UTR |
| ACCAGAAACCTCTCGAGGAT+GGG | 0.548981 | 1_2:+17439691 | Msa0059920:CDS |
| CCTCACATCCACGAAGGATG+TGG | 0.549263 | 1_2:-17437233 | None:intergenic |
| GTCCCGACCAATGAGCTCAA+TGG | 0.551521 | 1_2:-17437031 | None:intergenic |
| GAACGGCTTAACAGTTTGTA+GGG | 0.558245 | 1_2:+17439511 | Msa0059920:CDS |
| AAGTTAACAGGGAACCTTGG+AGG | 0.558483 | 1_2:-17435071 | None:intergenic |
| TAAATAGGCTCTAGGACCAA+AGG | 0.562311 | 1_2:+17436933 | Msa0059920:intron |
| AAGGGCCGCAAGAGCCCAGA+AGG | 0.562789 | 1_2:+17436952 | Msa0059920:CDS |
| GGATGCACACTTGACACTGA+AGG | 0.564728 | 1_2:+17438463 | Msa0059920:CDS |
| ATGCCTCCATCTCATCTGAA+GGG | 0.564762 | 1_2:+17437538 | Msa0059920:CDS |
| GCTTGCTGTCTGAAGTGACT+AGG | 0.566444 | 1_2:+17439477 | Msa0059920:CDS |
| TCACACCTTCTGGGCTCTTG+CGG | 0.569295 | 1_2:-17436957 | None:intergenic |
| AAATAGGCTCTAGGACCAAA+GGG | 0.571475 | 1_2:+17436934 | Msa0059920:intron |
| TCGAATAAGATTACTTTCGG+TGG | 0.571609 | 1_2:+17430780 | None:intergenic |
| AGAATTAAGAGTCTTGGGGT+TGG | 0.573664 | 1_2:+17431142 | Msa0059920:five_prime_UTR |
| GAGATGGACATGTTAAGATA+GGG | 0.574314 | 1_2:-17439931 | None:intergenic |
| CTTTGGTAATTATGAAGTCA+AGG | 0.574350 | 1_2:-17436127 | None:intergenic |
| TATCCTTTGCACACAGCTCA+AGG | 0.579485 | 1_2:-17439448 | None:intergenic |
| ATTAAGTAAGATACATGAGA+TGG | 0.580895 | 1_2:-17439947 | None:intergenic |
| GATGCACACTTGACACTGAA+GGG | 0.583904 | 1_2:+17438464 | Msa0059920:CDS |
| GTGAAGAATTAAGAGTCTTG+GGG | 0.584942 | 1_2:+17431138 | Msa0059920:five_prime_UTR |
| TACTCTAGCCCATCCTCGAG+AGG | 0.585301 | 1_2:-17439699 | None:intergenic |
| AATGGCTGTATGATCACCAA+TGG | 0.585858 | 1_2:-17437013 | None:intergenic |
| TTAGTGTGAGATGCAAAGAT+CGG | 0.586475 | 1_2:+17437457 | Msa0059920:CDS |
| AGGGCAGGTGTGTCAACCAT+AGG | 0.587010 | 1_2:+17439530 | Msa0059920:CDS |
| CCACATCCTTCGTGGATGTG+AGG | 0.591932 | 1_2:+17437233 | Msa0059920:CDS |
| AAAGCTTACATATCTTCTGA+TGG | 0.594595 | 1_2:+17436146 | Msa0059920:CDS |
| CCTTCTGTCCATATGGGTGA+AGG | 0.594675 | 1_2:-17437298 | None:intergenic |
| CAGCCATTGAGCTCATTGGT+CGG | 0.596989 | 1_2:+17437028 | Msa0059920:CDS |
| AGTTGGGAAGGCAAACGGGT+TGG | 0.597769 | 1_2:+17436982 | Msa0059920:CDS |
| CCTTCACCCATATGGACAGA+AGG | 0.598971 | 1_2:+17437298 | Msa0059920:CDS |
| TTCTATTATGCTATCCACGT+TGG | 0.599235 | 1_2:-17431026 | None:intergenic |
| CAATGATGTTCATATCCACA+GGG | 0.601090 | 1_2:-17439598 | None:intergenic |
| GAAGGTGTGAAGAGTTGGGA+AGG | 0.603934 | 1_2:+17436970 | Msa0059920:CDS |
| ATAAGGCCCTTCAGATGAGA+TGG | 0.605356 | 1_2:-17437544 | None:intergenic |
| GATAGGGATTATGAGAGTGC+TGG | 0.606196 | 1_2:+17437342 | Msa0059920:CDS |
| CACTGAAGGGGAGAAAGAAA+GGG | 0.607213 | 1_2:+17438477 | Msa0059920:CDS |
| ATGAACAGTATTTCATGTCA+CGG | 0.611220 | 1_2:+17436412 | Msa0059920:intron |
| TGTGATGGTCAATGTGAAGA+AGG | 0.612803 | 1_2:+17439649 | Msa0059920:CDS |
| ACTAGGATTCTACGAGAGAA+CGG | 0.613355 | 1_2:+17439494 | Msa0059920:CDS |
| AGAAATTGGCCAGACTGTGA+TGG | 0.614374 | 1_2:+17439634 | Msa0059920:CDS |
| AGGGATTATGAGAGTGCTGG+TGG | 0.616212 | 1_2:+17437345 | Msa0059920:CDS |
| TGTCTGCACTCTTACTGACA+TGG | 0.618144 | 1_2:+17437500 | Msa0059920:CDS |
| AATTTATTGACGAGAGAAGG+TGG | 0.618355 | 1_2:+17434981 | Msa0059920:five_prime_UTR |
| ATGGGTGAAGGTGAAACCCA+TGG | 0.621489 | 1_2:-17437286 | None:intergenic |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.636120 | 1_2:+17438522 | Msa0059920:CDS |
| AGGATGATGAGAATGTGTCC+AGG | 0.638867 | 1_2:+17437253 | Msa0059920:CDS |
| GCAACAGAATCAATCCTCCA+AGG | 0.646007 | 1_2:+17435057 | Msa0059920:CDS |
| TATGCACTACTTGGAATACG+TGG | 0.652766 | 1_2:+17430834 | Msa0059920:five_prime_UTR |
| AGGCCCTTCAGATGAGATGG+AGG | 0.656278 | 1_2:-17437541 | None:intergenic |
| GGAGTACTTCATCAGGCACG+TGG | 0.663877 | 1_2:+17438438 | Msa0059920:intron |
| ATGCACACTTGACACTGAAG+GGG | 0.665219 | 1_2:+17438465 | Msa0059920:CDS |
| GAGCCTTGAGCTGTGTGCAA+AGG | 0.668681 | 1_2:+17439445 | Msa0059920:CDS |
| ATTGATAGCGTCAATAAACC+CGG | 0.669304 | 1_2:+17436071 | Msa0059920:CDS |
| TTTCATGTCACGGATCAGCA+AGG | 0.670024 | 1_2:+17436422 | Msa0059920:CDS |
| ATATCTCAGACAAAAGACCT+GGG | 0.673607 | 1_2:-17437056 | None:intergenic |
| CTGTGTGCAAAGGATAGAGT+GGG | 0.677348 | 1_2:+17439455 | Msa0059920:CDS |
| GCTGTGTGCAAAGGATAGAG+TGG | 0.682070 | 1_2:+17439454 | Msa0059920:CDS |
| TATTGTTTGTCATTCCAACG+TGG | 0.693250 | 1_2:+17431012 | Msa0059920:five_prime_UTR |
| ATATTGGGCCTGAAAGAGGG+AGG | 0.694567 | 1_2:-17437396 | None:intergenic |
| CATCATCCTCACATCCACGA+AGG | 0.702439 | 1_2:-17437239 | None:intergenic |
| AAAGCACCAGAAACCTCTCG+AGG | 0.723344 | 1_2:+17439686 | Msa0059920:CDS |
| AGATGCATATGGAAACCCTG+TGG | 0.774336 | 1_2:+17439583 | Msa0059920:CDS |
| TCTCAGACAAAAGACCTGGG+CGG | 0.775644 | 1_2:-17437053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAATTCAAATTATTTATA+TGG | + | chr1_2:17431290-17431309 | Msa0059920:intron | 10.0% |
| !! | GAAATATATTCTATTAAATA+TGG | + | chr1_2:17431759-17431778 | Msa0059920:intron | 10.0% |
| !! | AATTGTTAATGAATAAAAAT+TGG | - | chr1_2:17432148-17432167 | None:intergenic | 10.0% |
| !!! | AGAATTAATTAATTATTTTG+AGG | - | chr1_2:17435569-17435588 | None:intergenic | 10.0% |
| !! | TTGTTTACTTAATTAAAATA+TGG | + | chr1_2:17436260-17436279 | Msa0059920:intron | 10.0% |
| !! | ATTATGATTGTTGAATTTAA+TGG | + | chr1_2:17431224-17431243 | Msa0059920:intron | 15.0% |
| !!! | TGAATAAAAATTGGTTTTTT+AGG | - | chr1_2:17432139-17432158 | None:intergenic | 15.0% |
| !!! | TTATAAATTCTTAAAGTGTT+TGG | + | chr1_2:17433865-17433884 | Msa0059920:intron | 15.0% |
| !! | TGATTTGATAAAATATATCT+TGG | - | chr1_2:17434698-17434717 | None:intergenic | 15.0% |
| !! | TGATTTGATAAAATATATCT+TGG | - | chr1_2:17434698-17434717 | None:intergenic | 15.0% |
| !!! | TTAAACTCTAAAAAAATTGA+CGG | + | chr1_2:17435142-17435161 | Msa0059920:intron | 15.0% |
| !!! | ATTAATTCTAACATTTTTCA+TGG | + | chr1_2:17435580-17435599 | Msa0059920:intron | 15.0% |
| !!! | TTTTTTTTTCTTTCTGTTTT+TGG | - | chr1_2:17435691-17435710 | None:intergenic | 15.0% |
| !! | TAAGTTAAATTAATGATGTT+AGG | - | chr1_2:17435741-17435760 | None:intergenic | 15.0% |
| !!! | ACATCATTAATTTAACTTAT+TGG | + | chr1_2:17435742-17435761 | Msa0059920:intron | 15.0% |
| !! | AGTAACTATAAAATAAAGAA+TGG | - | chr1_2:17437611-17437630 | None:intergenic | 15.0% |
| !!! | TTTACAGTAATATTTTGAAT+TGG | + | chr1_2:17437655-17437674 | Msa0059920:intron | 15.0% |
| !!! | TTGTTTTCAAATTTTTGTAT+AGG | - | chr1_2:17437865-17437884 | None:intergenic | 15.0% |
| !! | AAATTAATTGACAAAATTTG+AGG | + | chr1_2:17438362-17438381 | Msa0059920:intron | 15.0% |
| !! | ATAGAGATTAAAAATTGATA+AGG | - | chr1_2:17439074-17439093 | None:intergenic | 15.0% |
| !! | ATAAATTATTATGCACTACT+TGG | + | chr1_2:17430825-17430844 | Msa0059920:five_prime_UTR | 20.0% |
| !!! | TCTACTCATTTTTATTTGAA+AGG | + | chr1_2:17431321-17431340 | Msa0059920:intron | 20.0% |
| !!! | TCTACTCATTTTTATTTGAA+AGG | + | chr1_2:17431321-17431340 | Msa0059920:intron | 20.0% |
| !! | TTAACAAAGCATGATTATTT+CGG | + | chr1_2:17431812-17431831 | Msa0059920:intron | 20.0% |
| !! | AAAAAAAGAAAAACACTTCT+AGG | + | chr1_2:17432044-17432063 | Msa0059920:intron | 20.0% |
| !!! | ATTTCACTAATTTAGTTCAT+AGG | - | chr1_2:17432078-17432097 | None:intergenic | 20.0% |
| !! | AAGAATATATTACAGTTAGT+TGG | - | chr1_2:17432108-17432127 | None:intergenic | 20.0% |
| !!! | ATCTCCACAAAAAATATTTT+TGG | + | chr1_2:17432338-17432357 | Msa0059920:intron | 20.0% |
| !!! | TCTCCACAAAAAATATTTTT+GGG | + | chr1_2:17432339-17432358 | Msa0059920:intron | 20.0% |
| !! | GACCAAAAAAAAAAACTTAT+GGG | - | chr1_2:17432446-17432465 | None:intergenic | 20.0% |
| !! | TGACCAAAAAAAAAAACTTA+TGG | - | chr1_2:17432447-17432466 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTTCACTAAGTG+AGG | + | chr1_2:17432522-17432541 | Msa0059920:intron | 20.0% |
| !!! | AATCTATAGATTTTGTAGTA+AGG | - | chr1_2:17432712-17432731 | None:intergenic | 20.0% |
| !! | TAAAACAGATGTTGAAAAAT+AGG | - | chr1_2:17432763-17432782 | None:intergenic | 20.0% |
| !! | TAAAATAAGCGTAGAATATA+TGG | - | chr1_2:17432860-17432879 | None:intergenic | 20.0% |
| !!! | AAAGTACAATTTAAGTTGAA+GGG | - | chr1_2:17432998-17433017 | None:intergenic | 20.0% |
| !! | TTGTTAGTTCATAACATAAT+TGG | + | chr1_2:17433439-17433458 | Msa0059920:intron | 20.0% |
| !!! | CACTTTAAGAATTTATAATC+AGG | - | chr1_2:17433863-17433882 | None:intergenic | 20.0% |
| !!! | ATTCTAAAATAGTTACAAGT+CGG | + | chr1_2:17433912-17433931 | Msa0059920:intron | 20.0% |
| !!! | TCAAAAGAATATGTTTTCAT+AGG | + | chr1_2:17433950-17433969 | Msa0059920:intron | 20.0% |
| !! | AGATTAGAATAAGAAAGTAA+TGG | + | chr1_2:17434903-17434922 | Msa0059920:intron | 20.0% |
| !!! | TTAAATATTTTGCAGATCAT+TGG | - | chr1_2:17435126-17435145 | None:intergenic | 20.0% |
| !!! | GTTATTTTTTTGTCAAAACA+AGG | - | chr1_2:17435344-17435363 | None:intergenic | 20.0% |
| !! | TTCTTTATTCCTAGTAAATT+AGG | + | chr1_2:17435933-17435952 | Msa0059920:intron | 20.0% |
| !!! | AATTATTGACTTCATTGAAA+AGG | + | chr1_2:17436466-17436485 | Msa0059920:CDS | 20.0% |
| !! | GTTAAATTAAAAGCAAACAA+AGG | - | chr1_2:17437993-17438012 | None:intergenic | 20.0% |
| !! | AGGTTCAAAATGTATTAATT+TGG | - | chr1_2:17438797-17438816 | None:intergenic | 20.0% |
| !!! | TTTTTTTCCTTCATATTTTG+AGG | - | chr1_2:17439000-17439019 | None:intergenic | 20.0% |
| !!! | TAATTTTATTAGTTTTCGAC+AGG | + | chr1_2:17439111-17439130 | Msa0059920:intron | 20.0% |
| !! | TAGGGACTATAAATAATTAA+TGG | + | chr1_2:17439215-17439234 | Msa0059920:intron | 20.0% |
| !! | TCATTTACAAATCACAAAAT+AGG | - | chr1_2:17439790-17439809 | None:intergenic | 20.0% |
| !!! | ATTGTTTGGTTTAAAACAAA+AGG | - | chr1_2:17439881-17439900 | None:intergenic | 20.0% |
| ! | GACAATATCTTCCATTAAAT+TGG | + | chr1_2:17430913-17430932 | Msa0059920:five_prime_UTR | 25.0% |
| ! | TGACAAACAATAGAACATTT+GGG | - | chr1_2:17431004-17431023 | None:intergenic | 25.0% |
| ! | ATGACAAACAATAGAACATT+TGG | - | chr1_2:17431005-17431024 | None:intergenic | 25.0% |
| ! | GAAATTACATTGATGAAGTT+AGG | - | chr1_2:17431466-17431485 | None:intergenic | 25.0% |
| ! | TGTTCTTTGGCATAAATTTA+TGG | - | chr1_2:17431501-17431520 | None:intergenic | 25.0% |
| !! | CATATAGTTACTTTGTTCTT+TGG | - | chr1_2:17431514-17431533 | None:intergenic | 25.0% |
| ! | AAAAACTATATGATGCATTG+AGG | + | chr1_2:17431557-17431576 | Msa0059920:intron | 25.0% |
| !!! | TTTGAACACTTTTTCAAAGA+GGG | - | chr1_2:17431614-17431633 | None:intergenic | 25.0% |
| !!! | TTTTGAACACTTTTTCAAAG+AGG | - | chr1_2:17431615-17431634 | None:intergenic | 25.0% |
| ! | TGTGGATAAAAAACTGTAAT+TGG | + | chr1_2:17431733-17431752 | Msa0059920:intron | 25.0% |
| ! | TGTTAAAGATCAATCTTTGT+AGG | - | chr1_2:17431798-17431817 | None:intergenic | 25.0% |
| !!! | GAGTCTTTTTTTTTTTTGAG+GGG | - | chr1_2:17431995-17432014 | None:intergenic | 25.0% |
| !!! | CGAGTCTTTTTTTTTTTTGA+GGG | - | chr1_2:17431996-17432015 | None:intergenic | 25.0% |
| !!! | TCGAGTCTTTTTTTTTTTTG+AGG | - | chr1_2:17431997-17432016 | None:intergenic | 25.0% |
| !!! | AGACCCAAAAATATTTTTTG+TGG | - | chr1_2:17432345-17432364 | None:intergenic | 25.0% |
| ! | GCATAATTAGAGTAAAAAGT+GGG | - | chr1_2:17432398-17432417 | None:intergenic | 25.0% |
| ! | TGCATAATTAGAGTAAAAAG+TGG | - | chr1_2:17432399-17432418 | None:intergenic | 25.0% |
| !!! | GTCCCATAAGTTTTTTTTTT+TGG | + | chr1_2:17432441-17432460 | Msa0059920:intron | 25.0% |
| ! | AGATTGAGAAATCAATGAAT+TGG | - | chr1_2:17432605-17432624 | None:intergenic | 25.0% |
| !!! | CATTGATTTCTCAATCTTTT+TGG | + | chr1_2:17432608-17432627 | Msa0059920:intron | 25.0% |
| !!! | ATTTCTTTGATAGTTTTTCC+AGG | + | chr1_2:17432634-17432653 | Msa0059920:intron | 25.0% |
| !! | TATAGATTTTGTAGTAAGGA+AGG | - | chr1_2:17432708-17432727 | None:intergenic | 25.0% |
| ! | AGATGTTGAAAAATAGGTTT+AGG | - | chr1_2:17432757-17432776 | None:intergenic | 25.0% |
| !!! | AATATATGGAGATGTTGTTT+TGG | - | chr1_2:17432846-17432865 | None:intergenic | 25.0% |
| !!! | GAAAGTACAATTTAAGTTGA+AGG | - | chr1_2:17432999-17433018 | None:intergenic | 25.0% |
| !!! | GTTGTTCATTTTTTCAAAGT+TGG | + | chr1_2:17433369-17433388 | Msa0059920:intron | 25.0% |
| !!! | ACATTTGATTTCCGTTTTAA+GGG | - | chr1_2:17433507-17433526 | None:intergenic | 25.0% |
| !! | TTGAAACAATCTAAAGTAAG+AGG | - | chr1_2:17433834-17433853 | None:intergenic | 25.0% |
| ! | TACAAAATCGTATACTTAGA+TGG | + | chr1_2:17434294-17434313 | Msa0059920:intron | 25.0% |
| !!! | ACGAAGAATTTTAGCTTAAA+TGG | - | chr1_2:17434338-17434357 | None:intergenic | 25.0% |
| !!! | TGTAAACCATATTGTTGTTT+GGG | - | chr1_2:17434574-17434593 | None:intergenic | 25.0% |
| ! | AATGGAATAAGGTTTCATAT+AGG | - | chr1_2:17434654-17434673 | None:intergenic | 25.0% |
| ! | GATAAAATATATCTTGGACT+TGG | - | chr1_2:17434692-17434711 | None:intergenic | 25.0% |
| ! | GATAAAATATATCTTGGACT+TGG | - | chr1_2:17434692-17434711 | None:intergenic | 25.0% |
| !! | ACAAATTGTTTCCTTTTCTA+TGG | + | chr1_2:17434803-17434822 | Msa0059920:intron | 25.0% |
| !!! | ACGTTTTTGCTTTTGATTAA+GGG | + | chr1_2:17434948-17434967 | Msa0059920:intron | 25.0% |
| !! | AAACAAGCATTGTATTTCAA+GGG | - | chr1_2:17435097-17435116 | None:intergenic | 25.0% |
| !! | AAAACAAGCATTGTATTTCA+AGG | - | chr1_2:17435098-17435117 | None:intergenic | 25.0% |
| !! | AGTAACAGTATGATGATTTT+TGG | + | chr1_2:17435182-17435201 | Msa0059920:intron | 25.0% |
| ! | TAAATTAATGATGTTAGGCT+AGG | - | chr1_2:17435736-17435755 | None:intergenic | 25.0% |
| !!! | TAAGTTGATGCTATATCTAA+TGG | + | chr1_2:17436026-17436045 | Msa0059920:intron | 25.0% |
| !! | TTTGTTGCTTATGCAAATAT+TGG | + | chr1_2:17436289-17436308 | Msa0059920:intron | 25.0% |
| !! | TTGTTGCTTATGCAAATATT+GGG | + | chr1_2:17436290-17436309 | Msa0059920:intron | 25.0% |
| !! | GACATGCTTTTAATAAGATA+TGG | + | chr1_2:17436520-17436539 | Msa0059920:intron | 25.0% |
| ! | GAAAGAACAAAAACAAGAAT+CGG | - | chr1_2:17436615-17436634 | None:intergenic | 25.0% |
| ! | TTGATATTTACAGTCTGTTT+AGG | - | chr1_2:17436840-17436859 | None:intergenic | 25.0% |
| ! | AACAGACTGTAAATATCAAT+TGG | + | chr1_2:17436841-17436860 | Msa0059920:intron | 25.0% |
| ! | CTAGTTGTGAACATTTAAAT+AGG | + | chr1_2:17436918-17436937 | Msa0059920:intron | 25.0% |
| ! | ATACGTTCTATTTCGATATT+GGG | - | chr1_2:17437414-17437433 | None:intergenic | 25.0% |
| ! | AATACGTTCTATTTCGATAT+TGG | - | chr1_2:17437415-17437434 | None:intergenic | 25.0% |
| ! | ATAGAACGTATTGAAGAAAA+AGG | + | chr1_2:17437423-17437442 | Msa0059920:CDS | 25.0% |
| !!! | GTCTGAATTTTCTGAAAAAT+AGG | + | chr1_2:17437720-17437739 | Msa0059920:intron | 25.0% |
| ! | AATTTCTTTATTCCTTCCTT+TGG | - | chr1_2:17437784-17437803 | None:intergenic | 25.0% |
| ! | TTGTTCTTGTAAAAAGACTA+AGG | + | chr1_2:17437811-17437830 | Msa0059920:intron | 25.0% |
| ! | TGTTCTTGTAAAAAGACTAA+GGG | + | chr1_2:17437812-17437831 | Msa0059920:intron | 25.0% |
| ! | AAAACCTAAAAACAAGATGA+GGG | + | chr1_2:17437887-17437906 | Msa0059920:intron | 25.0% |
| !! | TTTTGCAATTAAAACGGAAA+AGG | + | chr1_2:17437910-17437929 | Msa0059920:intron | 25.0% |
| !! | ATTTTATAGCTACTCTAGTT+TGG | + | chr1_2:17438046-17438065 | Msa0059920:intron | 25.0% |
| !! | TATGTTTGAAGTATGTAGTA+AGG | + | chr1_2:17438302-17438321 | Msa0059920:intron | 25.0% |
| !! | ATGTTTGAAGTATGTAGTAA+GGG | + | chr1_2:17438303-17438322 | Msa0059920:intron | 25.0% |
| ! | AACCATTACTAAAATAGACA+AGG | + | chr1_2:17438582-17438601 | Msa0059920:intron | 25.0% |
| !!! | ATCCTTGTCTATTTTAGTAA+TGG | - | chr1_2:17438587-17438606 | None:intergenic | 25.0% |
| !!! | CTTCATATTTTGAGGTTATA+GGG | - | chr1_2:17438992-17439011 | None:intergenic | 25.0% |
| !! | TAGACAGTCATGATTTTATA+AGG | - | chr1_2:17439043-17439062 | None:intergenic | 25.0% |
| !!! | GGTAAAAGTTTTATAGACTA+AGG | + | chr1_2:17439173-17439192 | Msa0059920:intron | 25.0% |
| !! | TTAAACTATCGTGATTTTGT+AGG | + | chr1_2:17439196-17439215 | Msa0059920:intron | 25.0% |
| !! | TAAACTATCGTGATTTTGTA+GGG | + | chr1_2:17439197-17439216 | Msa0059920:intron | 25.0% |
| ! | ATAATAATATGCATGATAGC+TGG | - | chr1_2:17439289-17439308 | None:intergenic | 25.0% |
| ! | AGGTTCTTGACTTAATTAAA+AGG | + | chr1_2:17439749-17439768 | Msa0059920:exon | 25.0% |
| ! | GGTTCTTGACTTAATTAAAA+GGG | + | chr1_2:17439750-17439769 | Msa0059920:exon | 25.0% |
| ! | ATTAAGTAAGATACATGAGA+TGG | - | chr1_2:17439950-17439969 | None:intergenic | 25.0% |
| ! | GAATGTGTTGTATTTATACA+AGG | + | chr1_2:17440000-17440019 | Msa0059920:three_prime_UTR | 25.0% |
| AATACGTGGAAGTTTATCAT+TGG | + | chr1_2:17430848-17430867 | Msa0059920:five_prime_UTR | 30.0% | |
| TGAATCTTGGTCCAATTTAA+TGG | - | chr1_2:17430927-17430946 | None:intergenic | 30.0% | |
| TGAATAAAGCTCTTGAATCT+TGG | - | chr1_2:17430940-17430959 | None:intergenic | 30.0% | |
| ! | AACAATAGAACATTTGGGTT+GGG | - | chr1_2:17430999-17431018 | None:intergenic | 30.0% |
| AAACAATAGAACATTTGGGT+TGG | - | chr1_2:17431000-17431019 | None:intergenic | 30.0% | |
| TATAATCCTTAGCCAATCTT+TGG | + | chr1_2:17431110-17431129 | Msa0059920:five_prime_UTR | 30.0% | |
| ATGTGAAGAATTAAGAGTCT+TGG | + | chr1_2:17431136-17431155 | Msa0059920:five_prime_UTR | 30.0% | |
| TGTGAAGAATTAAGAGTCTT+GGG | + | chr1_2:17431137-17431156 | Msa0059920:five_prime_UTR | 30.0% | |
| ! | TTTTCTTTTGGATACACAAG+AGG | + | chr1_2:17431169-17431188 | Msa0059920:five_prime_UTR | 30.0% |
| CTTTGGCATAAATTTATGGA+TGG | - | chr1_2:17431497-17431516 | None:intergenic | 30.0% | |
| TAGACAGAACAATTTAATGC+TGG | - | chr1_2:17431669-17431688 | None:intergenic | 30.0% | |
| AGCATTAAATTGTTCTGTCT+AGG | + | chr1_2:17431668-17431687 | Msa0059920:intron | 30.0% | |
| !! | CTCATCGACGTATTTTTATA+TGG | + | chr1_2:17432219-17432238 | Msa0059920:intron | 30.0% |
| !!! | TTTTTTGTGGAGATTACCAT+TGG | - | chr1_2:17432332-17432351 | None:intergenic | 30.0% |
| !!! | ATTTTTGGGTCTCATTAACT+CGG | + | chr1_2:17432353-17432372 | Msa0059920:intron | 30.0% |
| TACATGTGAGTTAAACTTGT+GGG | - | chr1_2:17432478-17432497 | None:intergenic | 30.0% | |
| TTACATGTGAGTTAAACTTG+TGG | - | chr1_2:17432479-17432498 | None:intergenic | 30.0% | |
| !!! | TTTTTTCACTAAGTGAGGTT+CGG | + | chr1_2:17432527-17432546 | Msa0059920:intron | 30.0% |
| CAATGAATTGGATCGAAATA+TGG | - | chr1_2:17432593-17432612 | None:intergenic | 30.0% | |
| AAAAATAGGTTTAGGTGGTT+TGG | - | chr1_2:17432749-17432768 | None:intergenic | 30.0% | |
| TGTTGAAAAATAGGTTTAGG+TGG | - | chr1_2:17432754-17432773 | None:intergenic | 30.0% | |
| TATTGCATGAAATAGAGTGT+TGG | - | chr1_2:17432906-17432925 | None:intergenic | 30.0% | |
| TCTATTTCATGCAATATCGA+TGG | + | chr1_2:17432910-17432929 | Msa0059920:intron | 30.0% | |
| AGTTGAAGGGAAATTTGTAT+TGG | - | chr1_2:17432985-17433004 | None:intergenic | 30.0% | |
| TGGTAAGTCTCATAATCTAA+CGG | - | chr1_2:17433058-17433077 | None:intergenic | 30.0% | |
| AATGAACAACAACAACAACA+AGG | - | chr1_2:17433359-17433378 | None:intergenic | 30.0% | |
| !! | CACATTTGATTTCCGTTTTA+AGG | - | chr1_2:17433508-17433527 | None:intergenic | 30.0% |
| ACTTTGATAGAAGTTCAGTT+TGG | + | chr1_2:17433552-17433571 | Msa0059920:intron | 30.0% | |
| ACTGAAGACTATTAGACATA+TGG | + | chr1_2:17433581-17433600 | Msa0059920:intron | 30.0% | |
| AAGACTATTAGACATATGGA+GGG | + | chr1_2:17433585-17433604 | Msa0059920:intron | 30.0% | |
| ATAGACGCACAAATATATTG+TGG | + | chr1_2:17433703-17433722 | Msa0059920:intron | 30.0% | |
| GCATAATCCTAATAACAGAA+GGG | - | chr1_2:17433764-17433783 | None:intergenic | 30.0% | |
| !!! | CTATTTTAGAATCAAAGACG+TGG | - | chr1_2:17433904-17433923 | None:intergenic | 30.0% |
| AAACAACTAGATATCACATC+TGG | - | chr1_2:17434372-17434391 | None:intergenic | 30.0% | |
| ! | GTGTAAACCATATTGTTGTT+TGG | - | chr1_2:17434575-17434594 | None:intergenic | 30.0% |
| GTTATCATAGGAATGGAATA+AGG | - | chr1_2:17434665-17434684 | None:intergenic | 30.0% | |
| TGGTTATGTTATCATAGGAA+TGG | - | chr1_2:17434672-17434691 | None:intergenic | 30.0% | |
| GTTATCATAGGAATGGAATA+AGG | - | chr1_2:17434665-17434684 | None:intergenic | 30.0% | |
| TGGTTATGTTATCATAGGAA+TGG | - | chr1_2:17434672-17434691 | None:intergenic | 30.0% | |
| !! | GACGTTTTTGCTTTTGATTA+AGG | + | chr1_2:17434947-17434966 | Msa0059920:intron | 30.0% |
| TATTTCAAGGGAAGTTAACA+GGG | - | chr1_2:17435085-17435104 | None:intergenic | 30.0% | |
| !! | GCATTTAATTTTATGCTCTG+CGG | - | chr1_2:17435297-17435316 | None:intergenic | 30.0% |
| ATAACTAGTCCTTTGTTACA+AGG | + | chr1_2:17435359-17435378 | Msa0059920:intron | 30.0% | |
| ! | TTTCTGAAAATGTTGATCGT+AGG | - | chr1_2:17435801-17435820 | None:intergenic | 30.0% |
| ATTTAGCAATTCACTGAAAG+TGG | - | chr1_2:17435910-17435929 | None:intergenic | 30.0% | |
| !! | AATGATTGGCCTAATTTACT+AGG | - | chr1_2:17435945-17435964 | None:intergenic | 30.0% |
| AGTAAATTAGGCCAATCATT+AGG | + | chr1_2:17435945-17435964 | Msa0059920:intron | 30.0% | |
| ATCAAATGACCTAATGATGA+TGG | - | chr1_2:17435984-17436003 | None:intergenic | 30.0% | |
| ! | ATTAGGTCATTTGATTTCCA+TGG | + | chr1_2:17435989-17436008 | Msa0059920:intron | 30.0% |
| ! | CTTTGGTAATTATGAAGTCA+AGG | - | chr1_2:17436130-17436149 | None:intergenic | 30.0% |
| ATCAGAAGATATGTAAGCTT+TGG | - | chr1_2:17436147-17436166 | None:intergenic | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | + | chr1_2:17436146-17436165 | Msa0059920:CDS | 30.0% | |
| ATGAACAGTATTTCATGTCA+CGG | + | chr1_2:17436412-17436431 | Msa0059920:intron | 30.0% | |
| !! | AGTAGGCTTTATCTTTGTTT+TGG | + | chr1_2:17436556-17436575 | Msa0059920:intron | 30.0% |
| !!! | GCTTTATCTTTGTTTTGGAA+AGG | + | chr1_2:17436561-17436580 | Msa0059920:intron | 30.0% |
| AATCATGCTACCATATACTT+AGG | - | chr1_2:17436590-17436609 | None:intergenic | 30.0% | |
| TGTAATGCACTTACAATCTT+TGG | + | chr1_2:17436694-17436713 | Msa0059920:intron | 30.0% | |
| CAGAATTTATAAACACAGCT+AGG | + | chr1_2:17436718-17436737 | Msa0059920:intron | 30.0% | |
| ACTATGAACACTATCAGTAA+GGG | - | chr1_2:17436767-17436786 | None:intergenic | 30.0% | |
| AACTATGAACACTATCAGTA+AGG | - | chr1_2:17436768-17436787 | None:intergenic | 30.0% | |
| ! | TTCACAACTAGTTGATACAA+GGG | - | chr1_2:17436909-17436928 | None:intergenic | 30.0% |
| TGAACATTTAAATAGGCTCT+AGG | + | chr1_2:17436925-17436944 | Msa0059920:intron | 30.0% | |
| TTGTTGCATCATTGACATAA+AGG | - | chr1_2:17437158-17437177 | None:intergenic | 30.0% | |
| TAGGAAACAAAAATATTGCG+AGG | + | chr1_2:17437739-17437758 | Msa0059920:intron | 30.0% | |
| CAAAACCTAAAAACAAGATG+AGG | + | chr1_2:17437886-17437905 | Msa0059920:intron | 30.0% | |
| !!! | AAAACCCTCATCTTGTTTTT+AGG | - | chr1_2:17437894-17437913 | None:intergenic | 30.0% |
| ! | TGAGGGTTTTGCAATTAAAA+CGG | + | chr1_2:17437904-17437923 | Msa0059920:intron | 30.0% |
| GATCAAAACATTAGGGTTTA+TGG | - | chr1_2:17437959-17437978 | None:intergenic | 30.0% | |
| GTTCAAGGATCAAAACATTA+GGG | - | chr1_2:17437966-17437985 | None:intergenic | 30.0% | |
| TGTTCAAGGATCAAAACATT+AGG | - | chr1_2:17437967-17437986 | None:intergenic | 30.0% | |
| TTAACACTTGTGAAACTGTT+TGG | + | chr1_2:17438098-17438117 | Msa0059920:intron | 30.0% | |
| TAACACTTGTGAAACTGTTT+GGG | + | chr1_2:17438099-17438118 | Msa0059920:intron | 30.0% | |
| GTTGTTCTCATAAACTATCT+TGG | - | chr1_2:17438189-17438208 | None:intergenic | 30.0% | |
| ! | ATTAAGTTGTTTATCCCAAC+AGG | + | chr1_2:17438270-17438289 | Msa0059920:intron | 30.0% |
| ! | TTAAGTTGTTTATCCCAACA+GGG | + | chr1_2:17438271-17438290 | Msa0059920:intron | 30.0% |
| ! | TTTGAGGTAGAATGACAAAA+TGG | + | chr1_2:17438378-17438397 | Msa0059920:intron | 30.0% |
| TTGTTGATGTGGTAATTCTT+AGG | + | chr1_2:17438417-17438436 | Msa0059920:intron | 30.0% | |
| AAGTCTTTCATGCTCTATTA+TGG | + | chr1_2:17438635-17438654 | Msa0059920:intron | 30.0% | |
| TAGTGACTTAATGTTTCTCT+TGG | + | chr1_2:17438666-17438685 | Msa0059920:intron | 30.0% | |
| AAGAACACATATGAAGCTAT+GGG | - | chr1_2:17438701-17438720 | None:intergenic | 30.0% | |
| GATTTGAATGATATTACGTG+TGG | - | chr1_2:17438970-17438989 | None:intergenic | 30.0% | |
| !!! | CCTTCATATTTTGAGGTTAT+AGG | - | chr1_2:17438993-17439012 | None:intergenic | 30.0% |
| CCTATAACCTCAAAATATGA+AGG | + | chr1_2:17438990-17439009 | Msa0059920:intron | 30.0% | |
| CCTGTAAGATATAAAAACTG+TGG | - | chr1_2:17439144-17439163 | None:intergenic | 30.0% | |
| ! | CCACAGTTTTTATATCTTAC+AGG | + | chr1_2:17439141-17439160 | Msa0059920:intron | 30.0% |
| ATATCTTACAGGACTATAGA+TGG | + | chr1_2:17439152-17439171 | Msa0059920:intron | 30.0% | |
| ! | AACATCTTACAAGCATTGTT+TGG | - | chr1_2:17439895-17439914 | None:intergenic | 30.0% |
| ! | GACATTTGAAGTATATATGC+AGG | + | chr1_2:17440028-17440047 | Msa0059920:three_prime_UTR | 30.0% |
| !! | ACAATAGAACATTTGGGTTG+GGG | - | chr1_2:17430998-17431017 | None:intergenic | 35.0% |
| TATTGTTTGTCATTCCAACG+TGG | + | chr1_2:17431012-17431031 | Msa0059920:five_prime_UTR | 35.0% | |
| TTCTATTATGCTATCCACGT+TGG | - | chr1_2:17431029-17431048 | None:intergenic | 35.0% | |
| GTGAAGAATTAAGAGTCTTG+GGG | + | chr1_2:17431138-17431157 | Msa0059920:five_prime_UTR | 35.0% | |
| !!! | AACACTTTTTCAAAGAGGGA+GGG | - | chr1_2:17431610-17431629 | None:intergenic | 35.0% |
| CAAACTGAGCACTTCATTTA+AGG | - | chr1_2:17431708-17431727 | None:intergenic | 35.0% | |
| CAAAGCATGATTATTTCGGA+TGG | + | chr1_2:17431816-17431835 | Msa0059920:intron | 35.0% | |
| TTACCATTGGAGATGTTCTT+AGG | - | chr1_2:17432319-17432338 | None:intergenic | 35.0% | |
| !!! | TCGGATCATTTTGAAACAAC+TGG | + | chr1_2:17432372-17432391 | Msa0059920:intron | 35.0% |
| GGACTAGATATGAGTTTGTA+AGG | - | chr1_2:17432425-17432444 | None:intergenic | 35.0% | |
| GTAATATGATTGTCCTCCTA+AGG | + | chr1_2:17432673-17432692 | Msa0059920:intron | 35.0% | |
| TATGACTACAAAGAGAGAGT+TGG | - | chr1_2:17432800-17432819 | None:intergenic | 35.0% | |
| !!! | CGCTTATTTTACTCGCATAT+TGG | + | chr1_2:17432869-17432888 | Msa0059920:intron | 35.0% |
| ATGAGACTTACCAGATGTTA+AGG | + | chr1_2:17433065-17433084 | Msa0059920:intron | 35.0% | |
| TACCAGATGTTAAGGTAAGT+CGG | + | chr1_2:17433073-17433092 | Msa0059920:intron | 35.0% | |
| AGTTTGACCATTTCATCTGT+CGG | - | chr1_2:17433291-17433310 | None:intergenic | 35.0% | |
| CGAAGGAATTCAGATTGATT+AGG | - | chr1_2:17433320-17433339 | None:intergenic | 35.0% | |
| TGCTTGCACACAATTTACAT+CGG | + | chr1_2:17433476-17433495 | Msa0059920:intron | 35.0% | |
| !!! | TGATTTCCGTTTTAAGGGAA+AGG | - | chr1_2:17433502-17433521 | None:intergenic | 35.0% |
| GAAGACTATTAGACATATGG+AGG | + | chr1_2:17433584-17433603 | Msa0059920:intron | 35.0% | |
| AGACTATTAGACATATGGAG+GGG | + | chr1_2:17433586-17433605 | Msa0059920:intron | 35.0% | |
| ACCATTCATGTTTAAGTACG+AGG | - | chr1_2:17433630-17433649 | None:intergenic | 35.0% | |
| CTACACACTCGTCATTTAAA+TGG | + | chr1_2:17433671-17433690 | Msa0059920:intron | 35.0% | |
| CACTCGTCATTTAAATGGTT+CGG | + | chr1_2:17433676-17433695 | Msa0059920:intron | 35.0% | |
| CACAAATATATTGTGGAGAC+TGG | + | chr1_2:17433710-17433729 | Msa0059920:intron | 35.0% | |
| GGCATAATCCTAATAACAGA+AGG | - | chr1_2:17433765-17433784 | None:intergenic | 35.0% | |
| CATCTAACTATCCTGCATTT+GGG | + | chr1_2:17434058-17434077 | Msa0059920:intron | 35.0% | |
| ATGCAGAGTTACCAGATAAA+GGG | - | chr1_2:17434087-17434106 | None:intergenic | 35.0% | |
| AATGCAGAGTTACCAGATAA+AGG | - | chr1_2:17434088-17434107 | None:intergenic | 35.0% | |
| TTATCTGGTAACTCTGCATT+TGG | + | chr1_2:17434088-17434107 | Msa0059920:intron | 35.0% | |
| CTGAAGGATTATTAGATGCA+CGG | - | chr1_2:17434162-17434181 | None:intergenic | 35.0% | |
| TGCATCTAATAATCCTTCAG+TGG | + | chr1_2:17434162-17434181 | Msa0059920:intron | 35.0% | |
| AAGCAAACACTATCACTGTT+GGG | - | chr1_2:17434482-17434501 | None:intergenic | 35.0% | |
| TGAAGTCCCAAACAACAATA+TGG | + | chr1_2:17434565-17434584 | Msa0059920:intron | 35.0% | |
| ! | GTATCGATACATATGACCTT+TGG | + | chr1_2:17434615-17434634 | Msa0059920:intron | 35.0% |
| ! | GGACTTGGTTATGTTATCAT+AGG | - | chr1_2:17434677-17434696 | None:intergenic | 35.0% |
| GGAATAAGGTTTCATAGCAA+AGG | - | chr1_2:17434734-17434753 | None:intergenic | 35.0% | |
| ! | GGACTTGGTTATGTTATCAT+AGG | - | chr1_2:17434677-17434696 | None:intergenic | 35.0% |
| TTATTGTATCTCACCCAGTA+AGG | + | chr1_2:17434867-17434886 | Msa0059920:intron | 35.0% | |
| AGCAAAAACGTCTAGTTAGA+GGG | - | chr1_2:17434939-17434958 | None:intergenic | 35.0% | |
| AAGCAAAAACGTCTAGTTAG+AGG | - | chr1_2:17434940-17434959 | None:intergenic | 35.0% | |
| AGCAATTTATTGACGAGAGA+AGG | + | chr1_2:17434978-17434997 | Msa0059920:five_prime_UTR | 35.0% | |
| AATTTATTGACGAGAGAAGG+TGG | + | chr1_2:17434981-17435000 | Msa0059920:five_prime_UTR | 35.0% | |
| GTTGAATGGCAAAAGTTTGT+TGG | + | chr1_2:17435003-17435022 | Msa0059920:exon | 35.0% | |
| GTATTTCAAGGGAAGTTAAC+AGG | - | chr1_2:17435086-17435105 | None:intergenic | 35.0% | |
| TTACACTCCTTGTGAAATTG+AGG | + | chr1_2:17435419-17435438 | Msa0059920:intron | 35.0% | |
| CCATATACCTCAATTTCACA+AGG | - | chr1_2:17435429-17435448 | None:intergenic | 35.0% | |
| CCTTGTGAAATTGAGGTATA+TGG | + | chr1_2:17435426-17435445 | Msa0059920:intron | 35.0% | |
| TGTGAAATTGAGGTATATGG+TGG | + | chr1_2:17435429-17435448 | Msa0059920:intron | 35.0% | |
| GTGAAATTGAGGTATATGGT+GGG | + | chr1_2:17435430-17435449 | Msa0059920:intron | 35.0% | |
| GCAAATCAAGACTCAAAAAG+AGG | - | chr1_2:17435606-17435625 | None:intergenic | 35.0% | |
| !! | AGTCTTGATTTGCTATCTGA+AGG | + | chr1_2:17435613-17435632 | Msa0059920:intron | 35.0% |
| ! | TGAACTGAACATTTGTTGAG+CGG | + | chr1_2:17435866-17435885 | Msa0059920:intron | 35.0% |
| !!! | TCACTGAAAGTGGTTTTAAC+AGG | - | chr1_2:17435900-17435919 | None:intergenic | 35.0% |
| ! | TGATTTCCATGGTTTTCACA+TGG | + | chr1_2:17436000-17436019 | Msa0059920:intron | 35.0% |
| TTATCTCCATGTGAAAACCA+TGG | - | chr1_2:17436009-17436028 | None:intergenic | 35.0% | |
| !! | ATTGATAGCGTCAATAAACC+CGG | + | chr1_2:17436071-17436090 | Msa0059920:CDS | 35.0% |
| ACATATCTTCTGATGGTAGT+TGG | + | chr1_2:17436153-17436172 | Msa0059920:CDS | 35.0% | |
| ! | TTCTGATGGTAGTTGGTTTA+TGG | + | chr1_2:17436160-17436179 | Msa0059920:CDS | 35.0% |
| AGCATGTCAGATAAAAATCG+AGG | - | chr1_2:17436508-17436527 | None:intergenic | 35.0% | |
| ! | ATGGTAGCAATGCTTTTAGT+AGG | + | chr1_2:17436539-17436558 | Msa0059920:intron | 35.0% |
| GGAAAGGAAACCTAAGTATA+TGG | + | chr1_2:17436577-17436596 | Msa0059920:intron | 35.0% | |
| AGTGCATTACACACTCAAAA+GGG | - | chr1_2:17436685-17436704 | None:intergenic | 35.0% | |
| AAGTGCATTACACACTCAAA+AGG | - | chr1_2:17436686-17436705 | None:intergenic | 35.0% | |
| AAGGGAATTTCTACTGTGTT+TGG | - | chr1_2:17436749-17436768 | None:intergenic | 35.0% | |
| ! | GTTCACAACTAGTTGATACA+AGG | - | chr1_2:17436910-17436929 | None:intergenic | 35.0% |
| ATATCTCAGACAAAAGACCT+GGG | - | chr1_2:17437059-17437078 | None:intergenic | 35.0% | |
| TTGAATCATCATCAACAGCT+TGG | - | chr1_2:17437182-17437201 | None:intergenic | 35.0% | |
| ! | ACCAAATGTTGTTTGCTGAT+AGG | + | chr1_2:17437325-17437344 | Msa0059920:CDS | 35.0% |
| ! | CCAAATGTTGTTTGCTGATA+GGG | + | chr1_2:17437326-17437345 | Msa0059920:CDS | 35.0% |
| TTAGTGTGAGATGCAAAGAT+CGG | + | chr1_2:17437457-17437476 | Msa0059920:CDS | 35.0% | |
| TCTTGTAAGCCAAATCCATA+GGG | + | chr1_2:17437678-17437697 | Msa0059920:intron | 35.0% | |
| TGTTTACAAACTACACCCTA+TGG | - | chr1_2:17437696-17437715 | None:intergenic | 35.0% | |
| !!! | GAGGAATTTTTTAGTTCAGC+TGG | + | chr1_2:17437758-17437777 | Msa0059920:intron | 35.0% |
| ! | ATAGCTACTCTAGTTTGGAT+TGG | + | chr1_2:17438051-17438070 | Msa0059920:intron | 35.0% |
| GCTTATTTGAGCTTATCTAC+TGG | + | chr1_2:17438073-17438092 | Msa0059920:intron | 35.0% | |
| TCTCATAAACTATCTTGGAG+AGG | - | chr1_2:17438184-17438203 | None:intergenic | 35.0% | |
| ACATAGTATTAGTCCCTGTT+GGG | - | chr1_2:17438287-17438306 | None:intergenic | 35.0% | |
| AACATAGTATTAGTCCCTGT+TGG | - | chr1_2:17438288-17438307 | None:intergenic | 35.0% | |
| ! | TTTGAAGTATGTAGTAAGGG+AGG | + | chr1_2:17438306-17438325 | Msa0059920:intron | 35.0% |
| TGTAGACTAAGTTGTTGATG+TGG | + | chr1_2:17438406-17438425 | Msa0059920:intron | 35.0% | |
| !! | ATTCTTAGGAGTACTTCATC+AGG | + | chr1_2:17438431-17438450 | Msa0059920:intron | 35.0% |
| TATTCAAAGAAGAGTAAGCG+AGG | + | chr1_2:17438522-17438541 | Msa0059920:CDS | 35.0% | |
| AATAGACAAGGATGAACTTC+TGG | + | chr1_2:17438594-17438613 | Msa0059920:intron | 35.0% | |
| TCATGCTCTATTATGGAACT+TGG | + | chr1_2:17438642-17438661 | Msa0059920:intron | 35.0% | |
| AGAACACATATGAAGCTATG+GGG | - | chr1_2:17438700-17438719 | None:intergenic | 35.0% | |
| GAAGAACACATATGAAGCTA+TGG | - | chr1_2:17438702-17438721 | None:intergenic | 35.0% | |
| !! | TTGTTTTGTTGCGAATGGTA+CGG | + | chr1_2:17438829-17438848 | Msa0059920:intron | 35.0% |
| AATGGTACGGTATACATACA+TGG | + | chr1_2:17438842-17438861 | Msa0059920:intron | 35.0% | |
| TCGAGCATAAATATGACTGA+TGG | - | chr1_2:17439266-17439285 | None:intergenic | 35.0% | |
| ATTTAGTCCTTTCTCTCCTA+TGG | - | chr1_2:17439549-17439568 | None:intergenic | 35.0% | |
| TTCTATGTGAGAGATGCATA+TGG | + | chr1_2:17439572-17439591 | Msa0059920:CDS | 35.0% | |
| CAATGATGTTCATATCCACA+GGG | - | chr1_2:17439601-17439620 | None:intergenic | 35.0% | |
| TCAATGATGTTCATATCCAC+AGG | - | chr1_2:17439602-17439621 | None:intergenic | 35.0% | |
| CTAGAGTAAGCTTCTTCTTT+GGG | + | chr1_2:17439714-17439733 | Msa0059920:CDS | 35.0% | |
| AAGTTGTTGTGTGTCAAACT+TGG | + | chr1_2:17439837-17439856 | Msa0059920:three_prime_UTR | 35.0% | |
| ACATGTTAAGATAGGGAAGA+TGG | - | chr1_2:17439927-17439946 | None:intergenic | 35.0% | |
| GAGATGGACATGTTAAGATA+GGG | - | chr1_2:17439934-17439953 | None:intergenic | 35.0% | |
| TGAGATGGACATGTTAAGAT+AGG | - | chr1_2:17439935-17439954 | None:intergenic | 35.0% | |
| TATGCACTACTTGGAATACG+TGG | + | chr1_2:17430834-17430853 | Msa0059920:five_prime_UTR | 40.0% | |
| ! | GTGGAAGTTTATCATTGGCT+TGG | + | chr1_2:17430853-17430872 | Msa0059920:five_prime_UTR | 40.0% |
| AATCCTTAGCCAATCTTTGG+AGG | + | chr1_2:17431113-17431132 | Msa0059920:five_prime_UTR | 40.0% | |
| TCTTCACATCCTCCAAAGAT+TGG | - | chr1_2:17431125-17431144 | None:intergenic | 40.0% | |
| AGAATTAAGAGTCTTGGGGT+TGG | + | chr1_2:17431142-17431161 | Msa0059920:five_prime_UTR | 40.0% | |
| !!! | GGGGTTGGACTTTTTTCTTT+TGG | + | chr1_2:17431157-17431176 | Msa0059920:five_prime_UTR | 40.0% |
| !! | GAGGAGTGCTAAATACTACA+GGG | - | chr1_2:17431588-17431607 | None:intergenic | 40.0% |
| !!! | GAACACTTTTTCAAAGAGGG+AGG | - | chr1_2:17431611-17431630 | None:intergenic | 40.0% |
| !! | AGTGCTCAGTTTGAGTTTTG+TGG | + | chr1_2:17431715-17431734 | Msa0059920:intron | 40.0% |
| CATGATTATTTCGGATGGTC+TGG | + | chr1_2:17431821-17431840 | Msa0059920:intron | 40.0% | |
| AAAGACTCGACAACACTTCT+AGG | + | chr1_2:17432007-17432026 | Msa0059920:intron | 40.0% | |
| ACTAGACACATAGAAAGACC+TGG | - | chr1_2:17432655-17432674 | None:intergenic | 40.0% | |
| AAGGAGACTATATCCTTAGG+AGG | - | chr1_2:17432689-17432708 | None:intergenic | 40.0% | |
| AGGAAGGAGACTATATCCTT+AGG | - | chr1_2:17432692-17432711 | None:intergenic | 40.0% | |
| !! | GCATGAAATAGAGTGTTGGA+AGG | - | chr1_2:17432902-17432921 | None:intergenic | 40.0% |
| TTCATGCAATATCGATGGTC+TGG | + | chr1_2:17432915-17432934 | Msa0059920:intron | 40.0% | |
| ACCAGATGTTAAGGTAAGTC+GGG | + | chr1_2:17433074-17433093 | Msa0059920:intron | 40.0% | |
| ! | TGGTTTTTCATCCAACATGG+CGG | - | chr1_2:17433140-17433159 | None:intergenic | 40.0% |
| ! | TGGTGGTTTTTCATCCAACA+TGG | - | chr1_2:17433143-17433162 | None:intergenic | 40.0% |
| TTCATCTTCATGCCATGGAA+TGG | - | chr1_2:17433192-17433211 | None:intergenic | 40.0% | |
| ATTGCTTCATCTTCATGCCA+TGG | - | chr1_2:17433197-17433216 | None:intergenic | 40.0% | |
| CATAGCTCAATGTCTCTATC+CGG | + | chr1_2:17433239-17433258 | Msa0059920:intron | 40.0% | |
| GACTCTCAAGGAAAATACGA+AGG | - | chr1_2:17433337-17433356 | None:intergenic | 40.0% | |
| AACAACAACAAGGACTCTCA+AGG | - | chr1_2:17433349-17433368 | None:intergenic | 40.0% | |
| ATATGGAGGGGTTGAGTTTA+AGG | + | chr1_2:17433598-17433617 | Msa0059920:intron | 40.0% | |
| CATGTTTAAGTACGAGGCTA+AGG | - | chr1_2:17433624-17433643 | None:intergenic | 40.0% | |
| GCCTCGTACTTAAACATGAA+TGG | + | chr1_2:17433626-17433645 | Msa0059920:intron | 40.0% | |
| CTAATAACAGAAGGGAAGAC+CGG | - | chr1_2:17433756-17433775 | None:intergenic | 40.0% | |
| GTAAGAGGACTCAATGTTGT+GGG | - | chr1_2:17433819-17433838 | None:intergenic | 40.0% | |
| AGTAAGAGGACTCAATGTTG+TGG | - | chr1_2:17433820-17433839 | None:intergenic | 40.0% | |
| AATAGTTACAAGTCGGTCGA+CGG | + | chr1_2:17433919-17433938 | Msa0059920:intron | 40.0% | |
| TTACCAAATACATGGTCAGC+TGG | - | chr1_2:17433987-17434006 | None:intergenic | 40.0% | |
| AAGCAGGGTTACCAAATACA+TGG | - | chr1_2:17433995-17434014 | None:intergenic | 40.0% | |
| ATGCACGATTACTAGAAGCA+GGG | - | chr1_2:17434010-17434029 | None:intergenic | 40.0% | |
| CATCTTTGTGATCCTGCATT+TGG | + | chr1_2:17434027-17434046 | Msa0059920:intron | 40.0% | |
| ATGCAGGATAGTTAGATGCA+GGG | - | chr1_2:17434056-17434075 | None:intergenic | 40.0% | |
| AATGCAGGATAGTTAGATGC+AGG | - | chr1_2:17434057-17434076 | None:intergenic | 40.0% | |
| GCATCTAACTATCCTGCATT+TGG | + | chr1_2:17434057-17434076 | Msa0059920:intron | 40.0% | |
| ATGCAGGATTGTTAGATGCA+AGG | - | chr1_2:17434117-17434136 | None:intergenic | 40.0% | |
| AATGCACATTGACAAGATGC+AGG | - | chr1_2:17434133-17434152 | None:intergenic | 40.0% | |
| GCATCTTGTCAATGTGCATT+TGG | + | chr1_2:17434133-17434152 | Msa0059920:intron | 40.0% | |
| AAAGGATTGTTCTCCACTGA+AGG | - | chr1_2:17434178-17434197 | None:intergenic | 40.0% | |
| ! | AAATGAGCAGAGAGGTATAG+AGG | + | chr1_2:17434251-17434270 | Msa0059920:intron | 40.0% |
| ! | AATGAGCAGAGAGGTATAGA+GGG | + | chr1_2:17434252-17434271 | Msa0059920:intron | 40.0% |
| CAAGCAAACACTATCACTGT+TGG | - | chr1_2:17434483-17434502 | None:intergenic | 40.0% | |
| ACTGTCTGTCACATTGTCAT+GGG | + | chr1_2:17434593-17434612 | Msa0059920:intron | 40.0% | |
| AGAGCAACAGACCATAGAAA+AGG | - | chr1_2:17434817-17434836 | None:intergenic | 40.0% | |
| GAGATACAATAAGCACATGG+AGG | - | chr1_2:17434859-17434878 | None:intergenic | 40.0% | |
| GGTGAGATACAATAAGCACA+TGG | - | chr1_2:17434862-17434881 | None:intergenic | 40.0% | |
| GTAGAATTCACTGCCTTACT+GGG | - | chr1_2:17434883-17434902 | None:intergenic | 40.0% | |
| TGTAGAATTCACTGCCTTAC+TGG | - | chr1_2:17434884-17434903 | None:intergenic | 40.0% | |
| CAAAAACGTCTAGTTAGAGG+GGG | - | chr1_2:17434937-17434956 | None:intergenic | 40.0% | |
| GCAAAAACGTCTAGTTAGAG+GGG | - | chr1_2:17434938-17434957 | None:intergenic | 40.0% | |
| TCGTACTCAGGATCAAAGTA+TGG | - | chr1_2:17435029-17435048 | None:intergenic | 40.0% | |
| TGACATCGACCTTGTAACAA+AGG | - | chr1_2:17435371-17435390 | None:intergenic | 40.0% | |
| TGTAACCTATGACACCACTA+GGG | - | chr1_2:17435404-17435423 | None:intergenic | 40.0% | |
| CATAAACGAGCAACTTCTTC+TGG | - | chr1_2:17435468-17435487 | None:intergenic | 40.0% | |
| CAGAAGAAGTTGCTCGTTTA+TGG | + | chr1_2:17435466-17435485 | Msa0059920:intron | 40.0% | |
| CCTTGATCAGTGTACAATCA+TGG | - | chr1_2:17435539-17435558 | None:intergenic | 40.0% | |
| CCATGATTGTACACTGATCA+AGG | + | chr1_2:17435536-17435555 | Msa0059920:CDS | 40.0% | |
| CAAGTGACTTAAAACTCCAG+TGG | - | chr1_2:17435647-17435666 | None:intergenic | 40.0% | |
| TTTAAGTCACTTGTGTCCTG+TGG | + | chr1_2:17435654-17435673 | Msa0059920:intron | 40.0% | |
| CAATAAACCCGGAATTCTTC+TGG | + | chr1_2:17436082-17436101 | Msa0059920:CDS | 40.0% | |
| TTATGAAGTCAAGGTCTGTC+AGG | - | chr1_2:17436121-17436140 | None:intergenic | 40.0% | |
| ! | GATGGTAGTTGGTTTATGGA+TGG | + | chr1_2:17436164-17436183 | Msa0059920:CDS | 40.0% |
| TATGGATGGTACGTTTGCAA+TGG | + | chr1_2:17436178-17436197 | Msa0059920:intron | 40.0% | |
| GAATGTGTATGTTGTAGGCA+AGG | - | chr1_2:17436329-17436348 | None:intergenic | 40.0% | |
| AGCACGAATGTGTATGTTGT+AGG | - | chr1_2:17436334-17436353 | None:intergenic | 40.0% | |
| GTGCATTACACACTCAAAAG+GGG | - | chr1_2:17436684-17436703 | None:intergenic | 40.0% | |
| AGTCTGTTTAGGAAACAGCA+GGG | - | chr1_2:17436829-17436848 | None:intergenic | 40.0% | |
| !! | TAAATAGGCTCTAGGACCAA+AGG | + | chr1_2:17436933-17436952 | Msa0059920:intron | 40.0% |
| !! | AAATAGGCTCTAGGACCAAA+GGG | + | chr1_2:17436934-17436953 | Msa0059920:intron | 40.0% |
| AATGGCTGTATGATCACCAA+TGG | - | chr1_2:17437016-17437035 | None:intergenic | 40.0% | |
| GATATCTCAGACAAAAGACC+TGG | - | chr1_2:17437060-17437079 | None:intergenic | 40.0% | |
| CAGCTGCAATCACATTGAAT+TGG | - | chr1_2:17437101-17437120 | None:intergenic | 40.0% | |
| ATGTGATTGCAGCTGAAGTT+TGG | + | chr1_2:17437106-17437125 | Msa0059920:CDS | 40.0% | |
| CTGAAGTTTGGACTCATAAC+AGG | + | chr1_2:17437118-17437137 | Msa0059920:CDS | 40.0% | |
| CCCTATCAGCAAACAACATT+TGG | - | chr1_2:17437329-17437348 | None:intergenic | 40.0% | |
| TGAAGAAAAAGGCTACTCAG+TGG | + | chr1_2:17437434-17437453 | Msa0059920:CDS | 40.0% | |
| TAGTGTGAGATGCAAAGATC+GGG | + | chr1_2:17437458-17437477 | Msa0059920:CDS | 40.0% | |
| ATGCATACCTGTGAAGCATA+AGG | - | chr1_2:17437564-17437583 | None:intergenic | 40.0% | |
| GTCTTGTAAGCCAAATCCAT+AGG | + | chr1_2:17437677-17437696 | Msa0059920:intron | 40.0% | |
| CAAACTACACCCTATGGATT+TGG | - | chr1_2:17437690-17437709 | None:intergenic | 40.0% | |
| !!! | TTTTTAGTTCAGCTGGCCAA+AGG | + | chr1_2:17437765-17437784 | Msa0059920:intron | 40.0% |
| GCAAACAAAGGATGTGTTCA+AGG | - | chr1_2:17437981-17438000 | None:intergenic | 40.0% | |
| !!! | TCTGCTTGTTTTGTTGCGAA+TGG | + | chr1_2:17438824-17438843 | Msa0059920:intron | 40.0% |
| ATGGTCAGATACAATCTGAG+TGG | - | chr1_2:17438877-17438896 | None:intergenic | 40.0% | |
| CATCGTATCCACCAATGAAT+CGG | + | chr1_2:17438894-17438913 | Msa0059920:intron | 40.0% | |
| GATATTACGTGTGGAGCATA+AGG | - | chr1_2:17438961-17438980 | None:intergenic | 40.0% | |
| ACTAGGATTCTACGAGAGAA+CGG | + | chr1_2:17439494-17439513 | Msa0059920:CDS | 40.0% | |
| AGAACGGCTTAACAGTTTGT+AGG | + | chr1_2:17439510-17439529 | Msa0059920:CDS | 40.0% | |
| GAACGGCTTAACAGTTTGTA+GGG | + | chr1_2:17439511-17439530 | Msa0059920:CDS | 40.0% | |
| !! | GAAGCACTGCGTAAAGAAAT+TGG | + | chr1_2:17439620-17439639 | Msa0059920:CDS | 40.0% |
| TGTGATGGTCAATGTGAAGA+AGG | + | chr1_2:17439649-17439668 | Msa0059920:CDS | 40.0% | |
| GCTAGAGTAAGCTTCTTCTT+TGG | + | chr1_2:17439713-17439732 | Msa0059920:CDS | 40.0% | |
| ! | CTTCTTCTTTGGGAACTTGT+TGG | + | chr1_2:17439724-17439743 | Msa0059920:CDS | 40.0% |
| !! | TCTTTGGGAACTTGTTGGAA+AGG | + | chr1_2:17439729-17439748 | Msa0059920:CDS | 40.0% |
| !! | AACATTTGGGTTGGGGCATT+TGG | - | chr1_2:17430991-17431010 | None:intergenic | 45.0% |
| ! | CATCCTCCAAAGATTGGCTA+AGG | - | chr1_2:17431119-17431138 | None:intergenic | 45.0% |
| !! | GGAGGAGTGCTAAATACTAC+AGG | - | chr1_2:17431589-17431608 | None:intergenic | 45.0% |
| !!! | ACTTTTTCAAAGAGGGAGGG+AGG | - | chr1_2:17431607-17431626 | None:intergenic | 45.0% |
| GATTATTTCGGATGGTCTGG+TGG | + | chr1_2:17431824-17431843 | Msa0059920:intron | 45.0% | |
| GTGCCTAAGAACATCTCCAA+TGG | + | chr1_2:17432313-17432332 | Msa0059920:intron | 45.0% | |
| ! | ACTAAGTGAGGTTCGGTACA+TGG | + | chr1_2:17432534-17432553 | Msa0059920:intron | 45.0% |
| ATATCGATGGTCTGGTGTAG+TGG | + | chr1_2:17432923-17432942 | Msa0059920:intron | 45.0% | |
| ACCCGACTTACCTTAACATC+TGG | - | chr1_2:17433078-17433097 | None:intergenic | 45.0% | |
| AAAGCCTAGCTTCCATTCCA+TGG | + | chr1_2:17433177-17433196 | Msa0059920:intron | 45.0% | |
| CGGATAGAGACATTGAGCTA+TGG | - | chr1_2:17433241-17433260 | None:intergenic | 45.0% | |
| CATCGGCCTTTCCCTTAAAA+CGG | + | chr1_2:17433493-17433512 | Msa0059920:intron | 45.0% | |
| ! | CTTACTCTTTTTCCACGAGC+CGG | + | chr1_2:17433734-17433753 | Msa0059920:intron | 45.0% |
| CGGTCTTCCCTTCTGTTATT+AGG | + | chr1_2:17433754-17433773 | Msa0059920:intron | 45.0% | |
| GAGGCAGGTTGCAATTAAGA+AGG | - | chr1_2:17433786-17433805 | None:intergenic | 45.0% | |
| AATACATGGTCAGCTGGTGA+GGG | - | chr1_2:17433981-17434000 | None:intergenic | 45.0% | |
| AAATACATGGTCAGCTGGTG+AGG | - | chr1_2:17433982-17434001 | None:intergenic | 45.0% | |
| TCACCAGCTGACCATGTATT+TGG | + | chr1_2:17433981-17434000 | Msa0059920:intron | 45.0% | |
| GATGCACGATTACTAGAAGC+AGG | - | chr1_2:17434011-17434030 | None:intergenic | 45.0% | |
| ATAAAGGGTCACCCAAATGC+AGG | - | chr1_2:17434072-17434091 | None:intergenic | 45.0% | |
| CATTTGGGTGACCCTTTATC+TGG | + | chr1_2:17434073-17434092 | Msa0059920:intron | 45.0% | |
| !! | ATCCTTTGAAGTGCCAACAG+TGG | + | chr1_2:17434191-17434210 | Msa0059920:intron | 45.0% |
| GACTAGTGAAATGAGCAGAG+AGG | + | chr1_2:17434243-17434262 | Msa0059920:intron | 45.0% | |
| CACTGTCTGTCACATTGTCA+TGG | + | chr1_2:17434592-17434611 | Msa0059920:intron | 45.0% | |
| ! | AGGAGCATAACTGCAACCAA+AGG | - | chr1_2:17434634-17434653 | None:intergenic | 45.0% |
| TTGCTGAAGTTCTCGTACTC+AGG | - | chr1_2:17435041-17435060 | None:intergenic | 45.0% | |
| GCAACAGAATCAATCCTCCA+AGG | + | chr1_2:17435057-17435076 | Msa0059920:CDS | 45.0% | |
| AAGTTAACAGGGAACCTTGG+AGG | - | chr1_2:17435074-17435093 | None:intergenic | 45.0% | |
| GTCATCAGTTCAATCCCTAG+TGG | + | chr1_2:17435387-17435406 | Msa0059920:intron | 45.0% | |
| !! | TCAATCCCTAGTGGTGTCAT+AGG | + | chr1_2:17435396-17435415 | Msa0059920:intron | 45.0% |
| GTGTAACCTATGACACCACT+AGG | - | chr1_2:17435405-17435424 | None:intergenic | 45.0% | |
| TCTAATTCGCAGGGTCTCTA+TGG | + | chr1_2:17435500-17435519 | Msa0059920:intron | 45.0% | |
| GACTTAAAACTCCAGTGGCT+AGG | - | chr1_2:17435642-17435661 | None:intergenic | 45.0% | |
| ! | TTGTGTCCTGTGGCTTTTTG+CGG | + | chr1_2:17435664-17435683 | Msa0059920:intron | 45.0% |
| ACTTGGGGTAGCCTAATGAT+TGG | - | chr1_2:17435959-17435978 | None:intergenic | 45.0% | |
| AATCATTAGGCTACCCCAAG+TGG | + | chr1_2:17435958-17435977 | Msa0059920:intron | 45.0% | |
| !! | CTAATGATGATGGCCACTTG+GGG | - | chr1_2:17435974-17435993 | None:intergenic | 45.0% |
| !! | CCTAATGATGATGGCCACTT+GGG | - | chr1_2:17435975-17435994 | None:intergenic | 45.0% |
| !! | ACCTAATGATGATGGCCACT+TGG | - | chr1_2:17435976-17435995 | None:intergenic | 45.0% |
| ACGACTTCCAGAAGAATTCC+GGG | - | chr1_2:17436092-17436111 | None:intergenic | 45.0% | |
| CACGACTTCCAGAAGAATTC+CGG | - | chr1_2:17436093-17436112 | None:intergenic | 45.0% | |
| TGTTGTAGGCAAGGTTTGCA+TGG | - | chr1_2:17436320-17436339 | None:intergenic | 45.0% | |
| TTTCATGTCACGGATCAGCA+AGG | + | chr1_2:17436422-17436441 | Msa0059920:CDS | 45.0% | |
| TACACACTCAAAAGGGGAGA+CGG | - | chr1_2:17436678-17436697 | None:intergenic | 45.0% | |
| CAGTCTGTTTAGGAAACAGC+AGG | - | chr1_2:17436830-17436849 | None:intergenic | 45.0% | |
| TGAAGAGTTGGGAAGGCAAA+CGG | + | chr1_2:17436977-17436996 | Msa0059920:CDS | 45.0% | |
| CATACAGCCATTGAGCTCAT+TGG | + | chr1_2:17437024-17437043 | Msa0059920:CDS | 45.0% | |
| AGGATGATGAGAATGTGTCC+AGG | + | chr1_2:17437253-17437272 | Msa0059920:CDS | 45.0% | |
| GTGTAGCCTTCTGTCCATAT+GGG | - | chr1_2:17437307-17437326 | None:intergenic | 45.0% | |
| ! | GATAGGGATTATGAGAGTGC+TGG | + | chr1_2:17437342-17437361 | Msa0059920:CDS | 45.0% |
| TTGATTCTCCTCCCTCTTTC+AGG | + | chr1_2:17437388-17437407 | Msa0059920:CDS | 45.0% | |
| TCGATATTGGGCCTGAAAGA+GGG | - | chr1_2:17437402-17437421 | None:intergenic | 45.0% | |
| TTCGATATTGGGCCTGAAAG+AGG | - | chr1_2:17437403-17437422 | None:intergenic | 45.0% | |
| TGTCTGCACTCTTACTGACA+TGG | + | chr1_2:17437500-17437519 | Msa0059920:CDS | 45.0% | |
| ATGCCTCCATCTCATCTGAA+GGG | + | chr1_2:17437538-17437557 | Msa0059920:CDS | 45.0% | |
| ATAAGGCCCTTCAGATGAGA+TGG | - | chr1_2:17437547-17437566 | None:intergenic | 45.0% | |
| GATGCACACTTGACACTGAA+GGG | + | chr1_2:17438464-17438483 | Msa0059920:CDS | 45.0% | |
| ATGCACACTTGACACTGAAG+GGG | + | chr1_2:17438465-17438484 | Msa0059920:CDS | 45.0% | |
| ACACTGAAGGGGAGAAAGAA+AGG | + | chr1_2:17438476-17438495 | Msa0059920:CDS | 45.0% | |
| CACTGAAGGGGAGAAAGAAA+GGG | + | chr1_2:17438477-17438496 | Msa0059920:CDS | 45.0% | |
| CAAAACAAGCAGATAGCTGC+AGG | - | chr1_2:17438817-17438836 | None:intergenic | 45.0% | |
| ! | CGATTCATTGGTGGATACGA+TGG | - | chr1_2:17438896-17438915 | None:intergenic | 45.0% |
| ATCCACCAATGAATCGGTGA+CGG | + | chr1_2:17438900-17438919 | Msa0059920:intron | 45.0% | |
| !! | ATCAACCGTCACCGATTCAT+TGG | - | chr1_2:17438908-17438927 | None:intergenic | 45.0% |
| ! | AATGAATCGGTGACGGTTGA+TGG | + | chr1_2:17438907-17438926 | Msa0059920:intron | 45.0% |
| TGTCGTTACCATTGATCCTC+TGG | + | chr1_2:17439404-17439423 | Msa0059920:intron | 45.0% | |
| GTCGTTACCATTGATCCTCT+GGG | + | chr1_2:17439405-17439424 | Msa0059920:intron | 45.0% | |
| TATCCTTTGCACACAGCTCA+AGG | - | chr1_2:17439451-17439470 | None:intergenic | 45.0% | |
| CTGTGTGCAAAGGATAGAGT+GGG | + | chr1_2:17439455-17439474 | Msa0059920:CDS | 45.0% | |
| GTGTCAACCATAGGAGAGAA+AGG | + | chr1_2:17439539-17439558 | Msa0059920:CDS | 45.0% | |
| AGATGCATATGGAAACCCTG+TGG | + | chr1_2:17439583-17439602 | Msa0059920:CDS | 45.0% | |
| AGAAATTGGCCAGACTGTGA+TGG | + | chr1_2:17439634-17439653 | Msa0059920:CDS | 45.0% | |
| TCACATTGACCATCACAGTC+TGG | - | chr1_2:17439646-17439665 | None:intergenic | 45.0% | |
| ACTTGGACAGTGCTTGAACT+TGG | + | chr1_2:17439854-17439873 | Msa0059920:three_prime_UTR | 45.0% | |
| !! | AAAAAAAAAAAAATTTGTAT+TGG | - | chr1_2:17432953-17432972 | None:intergenic | 5.0% |
| !!! | ATTAACTATAATTTTTAATA+TGG | - | chr1_2:17436376-17436395 | None:intergenic | 5.0% |
| TTTCATCCAACATGGCGGTG+CGG | - | chr1_2:17433135-17433154 | None:intergenic | 50.0% | |
| ! | TTTTGCGATGGTTGTGGTGG+TGG | - | chr1_2:17433160-17433179 | None:intergenic | 50.0% |
| ! | CTAGGCTTTTGCGATGGTTG+TGG | - | chr1_2:17433166-17433185 | None:intergenic | 50.0% |
| ! | TGGAAGCTAGGCTTTTGCGA+TGG | - | chr1_2:17433172-17433191 | None:intergenic | 50.0% |
| CATGCCATGGAATGGAAGCT+AGG | - | chr1_2:17433184-17433203 | None:intergenic | 50.0% | |
| ATGTCTCTATCCGGTGCAGA+TGG | + | chr1_2:17433248-17433267 | Msa0059920:intron | 50.0% | |
| GTCGTCACCGACAGATGAAA+TGG | + | chr1_2:17433281-17433300 | Msa0059920:intron | 50.0% | |
| TGTTGTGGGCATGGTTAACG+AGG | - | chr1_2:17433805-17433824 | None:intergenic | 50.0% | |
| AGGACTCAATGTTGTGGGCA+TGG | - | chr1_2:17433814-17433833 | None:intergenic | 50.0% | |
| GATGCAGGGTTACCAAATGC+AGG | - | chr1_2:17434042-17434061 | None:intergenic | 50.0% | |
| TGCCACTGTTGGCACTTCAA+AGG | - | chr1_2:17434196-17434215 | None:intergenic | 50.0% | |
| AAGTGCCAACAGTGGCAACT+AGG | + | chr1_2:17434199-17434218 | Msa0059920:intron | 50.0% | |
| AGTGCCAACAGTGGCAACTA+GGG | + | chr1_2:17434200-17434219 | Msa0059920:intron | 50.0% | |
| ! | CTTTTACGCAGCACAGCTTC+AGG | + | chr1_2:17434522-17434541 | Msa0059920:intron | 50.0% |
| GACGAGAGAAGGTGGTTGAA+TGG | + | chr1_2:17434989-17435008 | Msa0059920:exon | 50.0% | |
| GGGAAGTTAACAGGGAACCT+TGG | - | chr1_2:17435077-17435096 | None:intergenic | 50.0% | |
| TCTGAAGGAAACCTAGCCAC+TGG | + | chr1_2:17435628-17435647 | Msa0059920:intron | 50.0% | |
| TTTGGTCCGCAAAAAGCCAC+AGG | - | chr1_2:17435673-17435692 | None:intergenic | 50.0% | |
| CCCAAGTGGCCATCATCATT+AGG | + | chr1_2:17435972-17435991 | Msa0059920:intron | 50.0% | |
| AGACGGGCATAGTGCTTAAC+TGG | - | chr1_2:17436661-17436680 | None:intergenic | 50.0% | |
| ACACACTCAAAAGGGGAGAC+GGG | - | chr1_2:17436677-17436696 | None:intergenic | 50.0% | |
| ACAGCAGGGTAGATACTAGC+AGG | - | chr1_2:17436815-17436834 | None:intergenic | 50.0% | |
| CCCAACTCTTCACACCTTCT+GGG | - | chr1_2:17436969-17436988 | None:intergenic | 50.0% | |
| ! | CCCAGAAGGTGTGAAGAGTT+GGG | + | chr1_2:17436966-17436985 | Msa0059920:CDS | 50.0% |
| TCCCAACTCTTCACACCTTC+TGG | - | chr1_2:17436970-17436989 | None:intergenic | 50.0% | |
| ! | GAAGGTGTGAAGAGTTGGGA+AGG | + | chr1_2:17436970-17436989 | Msa0059920:CDS | 50.0% |
| GAAGAGTTGGGAAGGCAAAC+GGG | + | chr1_2:17436978-17436997 | Msa0059920:CDS | 50.0% | |
| CAGCCATTGAGCTCATTGGT+CGG | + | chr1_2:17437028-17437047 | Msa0059920:CDS | 50.0% | |
| AGCCATTGAGCTCATTGGTC+GGG | + | chr1_2:17437029-17437048 | Msa0059920:CDS | 50.0% | |
| TCTCAGACAAAAGACCTGGG+CGG | - | chr1_2:17437056-17437075 | None:intergenic | 50.0% | |
| ! | GTCTGAGATATCAGCTGTCC+TGG | + | chr1_2:17437068-17437087 | Msa0059920:CDS | 50.0% |
| CATTGAATTGGAAGCTCGCC+AGG | - | chr1_2:17437089-17437108 | None:intergenic | 50.0% | |
| AAGCTCAACCACATCCTTCG+TGG | + | chr1_2:17437225-17437244 | Msa0059920:CDS | 50.0% | |
| CATCATCCTCACATCCACGA+AGG | - | chr1_2:17437242-17437261 | None:intergenic | 50.0% | |
| TCCAGGACCAGTTTCTCCAT+GGG | + | chr1_2:17437270-17437289 | Msa0059920:CDS | 50.0% | |
| GGTGAAACCCATGGAGAAAC+TGG | - | chr1_2:17437280-17437299 | None:intergenic | 50.0% | |
| ATGGGTGAAGGTGAAACCCA+TGG | - | chr1_2:17437289-17437308 | None:intergenic | 50.0% | |
| GGGTTTCACCTTCACCCATA+TGG | + | chr1_2:17437290-17437309 | Msa0059920:CDS | 50.0% | |
| CCTTCTGTCCATATGGGTGA+AGG | - | chr1_2:17437301-17437320 | None:intergenic | 50.0% | |
| CCTTCACCCATATGGACAGA+AGG | + | chr1_2:17437298-17437317 | Msa0059920:CDS | 50.0% | |
| GGTGTAGCCTTCTGTCCATA+TGG | - | chr1_2:17437308-17437327 | None:intergenic | 50.0% | |
| !! | AGGGATTATGAGAGTGCTGG+TGG | + | chr1_2:17437345-17437364 | Msa0059920:CDS | 50.0% |
| ATATTGGGCCTGAAAGAGGG+AGG | - | chr1_2:17437399-17437418 | None:intergenic | 50.0% | |
| CATGCCTCCATCTCATCTGA+AGG | + | chr1_2:17437537-17437556 | Msa0059920:CDS | 50.0% | |
| ! | TGAAGGGCCTTATGCTTCAC+AGG | + | chr1_2:17437554-17437573 | Msa0059920:CDS | 50.0% |
| TAGTTCAGCTGGCCAAAGGA+AGG | + | chr1_2:17437769-17437788 | Msa0059920:intron | 50.0% | |
| TACTTCATCAGGCACGTGGA+TGG | + | chr1_2:17438442-17438461 | Msa0059920:CDS | 50.0% | |
| GGATGCACACTTGACACTGA+AGG | + | chr1_2:17438463-17438482 | Msa0059920:CDS | 50.0% | |
| !! | AACCGTCACCGATTCATTGG+TGG | - | chr1_2:17438905-17438924 | None:intergenic | 50.0% |
| ACCATTGATCCTCTGGGTGA+TGG | + | chr1_2:17439411-17439430 | Msa0059920:intron | 50.0% | |
| TCCATCACCCAGAGGATCAA+TGG | - | chr1_2:17439415-17439434 | None:intergenic | 50.0% | |
| GCTGTGTGCAAAGGATAGAG+TGG | + | chr1_2:17439454-17439473 | Msa0059920:CDS | 50.0% | |
| !! | GCTTGCTGTCTGAAGTGACT+AGG | + | chr1_2:17439477-17439496 | Msa0059920:CDS | 50.0% |
| GGCTTAACAGTTTGTAGGGC+AGG | + | chr1_2:17439515-17439534 | Msa0059920:CDS | 50.0% | |
| !! | GGTTTCTGGTGCTTTGGTGT+TGG | - | chr1_2:17439681-17439700 | None:intergenic | 50.0% |
| !! | TCGAGAGGTTTCTGGTGCTT+TGG | - | chr1_2:17439687-17439706 | None:intergenic | 50.0% |
| ! | AAAGCACCAGAAACCTCTCG+AGG | + | chr1_2:17439686-17439705 | Msa0059920:CDS | 50.0% |
| ACCAGAAACCTCTCGAGGAT+GGG | + | chr1_2:17439691-17439710 | Msa0059920:CDS | 50.0% | |
| ! | TGGGTTGGGGCATTTGGCAA+TGG | - | chr1_2:17430985-17431004 | None:intergenic | 55.0% |
| ! | GGCTTTTGCGATGGTTGTGG+TGG | - | chr1_2:17433163-17433182 | None:intergenic | 55.0% |
| !! | GATGACGGAACCATCTGCAC+CGG | - | chr1_2:17433261-17433280 | None:intergenic | 55.0% |
| TCTGTCGGTGACGACGATGA+CGG | - | chr1_2:17433276-17433295 | None:intergenic | 55.0% | |
| GTGCCAACAGTGGCAACTAG+GGG | + | chr1_2:17434201-17434220 | Msa0059920:intron | 55.0% | |
| TAGCCCCTAGTTGCCACTGT+TGG | - | chr1_2:17434207-17434226 | None:intergenic | 55.0% | |
| TCACACCTTCTGGGCTCTTG+CGG | - | chr1_2:17436960-17436979 | None:intergenic | 55.0% | |
| ! | GCCCAGAAGGTGTGAAGAGT+TGG | + | chr1_2:17436965-17436984 | Msa0059920:CDS | 55.0% |
| AGTTGGGAAGGCAAACGGGT+TGG | + | chr1_2:17436982-17437001 | Msa0059920:CDS | 55.0% | |
| !! | CGGGTTGGCATTCACTCCAT+TGG | + | chr1_2:17436997-17437016 | Msa0059920:CDS | 55.0% |
| GTCCCGACCAATGAGCTCAA+TGG | - | chr1_2:17437034-17437053 | None:intergenic | 55.0% | |
| CCTCACATCCACGAAGGATG+TGG | - | chr1_2:17437236-17437255 | None:intergenic | 55.0% | |
| CCACATCCTTCGTGGATGTG+AGG | + | chr1_2:17437233-17437252 | Msa0059920:CDS | 55.0% | |
| GTCCAGGACCAGTTTCTCCA+TGG | + | chr1_2:17437269-17437288 | Msa0059920:CDS | 55.0% | |
| ACCCATGGAGAAACTGGTCC+TGG | - | chr1_2:17437274-17437293 | None:intergenic | 55.0% | |
| AGGCCCTTCAGATGAGATGG+AGG | - | chr1_2:17437544-17437563 | None:intergenic | 55.0% | |
| ! | GGAGTACTTCATCAGGCACG+TGG | + | chr1_2:17438438-17438457 | Msa0059920:intron | 55.0% |
| !! | ATCCTCTGGGTGATGGACAC+AGG | + | chr1_2:17439418-17439437 | Msa0059920:intron | 55.0% |
| !! | TCCTCTGGGTGATGGACACA+GGG | + | chr1_2:17439419-17439438 | Msa0059920:intron | 55.0% |
| GAGCCTTGAGCTGTGTGCAA+AGG | + | chr1_2:17439445-17439464 | Msa0059920:CDS | 55.0% | |
| AGGGCAGGTGTGTCAACCAT+AGG | + | chr1_2:17439530-17439549 | Msa0059920:CDS | 55.0% | |
| !! | TCTGGTGCTTTGGTGTTGGC+TGG | - | chr1_2:17439677-17439696 | None:intergenic | 55.0% |
| CACCAGAAACCTCTCGAGGA+TGG | + | chr1_2:17439690-17439709 | Msa0059920:CDS | 55.0% | |
| TACTCTAGCCCATCCTCGAG+AGG | - | chr1_2:17439702-17439721 | None:intergenic | 55.0% | |
| GTGGGCATGGTTAACGAGGC+AGG | - | chr1_2:17433801-17433820 | None:intergenic | 60.0% | |
| CAGTGGCAACTAGGGGCTAG+CGG | + | chr1_2:17434208-17434227 | Msa0059920:intron | 60.0% | |
| ! | GGGCTAGCGGCGCAAACAAA+AGG | + | chr1_2:17434221-17434240 | Msa0059920:intron | 60.0% |
| ACCCTGTGTCCATCACCCAG+AGG | - | chr1_2:17439423-17439442 | None:intergenic | 60.0% | |
| GCCCATCCTCGAGAGGTTTC+TGG | - | chr1_2:17439695-17439714 | None:intergenic | 60.0% | |
| CATCCAACATGGCGGTGCGG+TGG | - | chr1_2:17433132-17433151 | None:intergenic | 65.0% | |
| !! | CAGAAGGGAAGACCGGCTCG+TGG | - | chr1_2:17433749-17433768 | None:intergenic | 65.0% |
| TCTGGGCTCTTGCGGCCCTT+TGG | - | chr1_2:17436952-17436971 | None:intergenic | 65.0% | |
| AAGGGCCGCAAGAGCCCAGA+AGG | + | chr1_2:17436952-17436971 | Msa0059920:CDS | 65.0% | |
| CCAACATGGCGGTGCGGTGG+TGG | - | chr1_2:17433129-17433148 | None:intergenic | 70.0% | |
| CCACCACCGCACCGCCATGT+TGG | + | chr1_2:17433126-17433145 | Msa0059920:intron | 70.0% | |
| CTCATTGGTCGGGACCGCCC+AGG | + | chr1_2:17437039-17437058 | Msa0059920:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 17430794 | 17440101 | 17430794 | ID=Msa0059920;Name=Msa0059920 |
| chr1_2 | mRNA | 17430794 | 17440101 | 17430794 | ID=Msa0059920-mRNA-1;Parent=Msa0059920;Name=Msa0059920-mRNA-1;_AED=0.19;_eAED=0.19;_QI=436|1|1|1|0.85|0.75|8|338|454 |
| chr1_2 | exon | 17430794 | 17431190 | 17430794 | ID=Msa0059920-mRNA-1:exon:6729;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17434969 | 17435078 | 17434969 | ID=Msa0059920-mRNA-1:exon:6730;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17435512 | 17435557 | 17435512 | ID=Msa0059920-mRNA-1:exon:6731;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17436071 | 17436185 | 17436071 | ID=Msa0059920-mRNA-1:exon:6732;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17436420 | 17436487 | 17436420 | ID=Msa0059920-mRNA-1:exon:6733;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17436940 | 17437575 | 17436940 | ID=Msa0059920-mRNA-1:exon:6734;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17438439 | 17438543 | 17438439 | ID=Msa0059920-mRNA-1:exon:6735;Parent=Msa0059920-mRNA-1 |
| chr1_2 | exon | 17439440 | 17440101 | 17439440 | ID=Msa0059920-mRNA-1:exon:6736;Parent=Msa0059920-mRNA-1 |
| chr1_2 | five_prime_UTR | 17430794 | 17431190 | 17430794 | ID=Msa0059920-mRNA-1:five_prime_utr;Parent=Msa0059920-mRNA-1 |
| chr1_2 | five_prime_UTR | 17434969 | 17435007 | 17434969 | ID=Msa0059920-mRNA-1:five_prime_utr;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17435008 | 17435078 | 17435008 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17435512 | 17435557 | 17435512 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17436071 | 17436185 | 17436071 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17436420 | 17436487 | 17436420 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17436940 | 17437575 | 17436940 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17438439 | 17438543 | 17438439 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | CDS | 17439440 | 17439763 | 17439440 | ID=Msa0059920-mRNA-1:cds;Parent=Msa0059920-mRNA-1 |
| chr1_2 | three_prime_UTR | 17439764 | 17440101 | 17439764 | ID=Msa0059920-mRNA-1:three_prime_utr;Parent=Msa0059920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
