Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061050 | XP_039689851.1 | 91.371 | 846 | 67 | 3 | 1 | 842 | 1 | 844 | 0.0 | 1503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061050 | A0A396JKY1 | 90.898 | 846 | 67 | 3 | 1 | 842 | 1 | 840 | 0.0 | 1491 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061050 | Msa0105600 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0061050 | Msa0544600 | 0.812814 | 3.507255e-51 | -8.615850e-47 |
| Msa0061050 | Msa0785670 | 0.808575 | 2.894793e-50 | -8.615850e-47 |
| Msa0061050 | Msa1068370 | 0.825573 | 4.354904e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061050 | MtrunA17_Chr1g0160911 | 90.898 | 846 | 67 | 3 | 1 | 842 | 1 | 840 | 0.0 | 1491 |
| Msa0061050 | MtrunA17_Chr3g0106931 | 32.620 | 187 | 118 | 4 | 122 | 306 | 580 | 760 | 5.14e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061050 | AT1G23180.1 | 54.203 | 797 | 327 | 8 | 50 | 840 | 68 | 832 | 0.0 | 804 |
| Msa0061050 | AT1G23180.2 | 53.425 | 584 | 240 | 6 | 50 | 628 | 68 | 624 | 0.0 | 578 |
Find 190 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAATGTCTCACCAATTT+TGG | 0.103166 | 1_2:-19027936 | None:intergenic |
| TATAACAAACCTTCTAAATT+TGG | 0.153821 | 1_2:+19029311 | Msa0061050:CDS |
| CTTTAACTGCATCTCTTTAT+TGG | 0.159287 | 1_2:-19030693 | None:intergenic |
| CTTTGCTGCGGAGGGGAATA+TGG | 0.171865 | 1_2:-19031689 | None:intergenic |
| AACTCGAGAAATTCTATAAT+TGG | 0.184777 | 1_2:+19032336 | Msa0061050:three_prime_UTR |
| CCTTGGTCCTTATTTGTAAA+AGG | 0.188169 | 1_2:+19032221 | Msa0061050:three_prime_UTR |
| CAAAATCTCTTGAAAATTTC+GGG | 0.195077 | 1_2:+19031242 | Msa0061050:CDS |
| GCAAAATCTCTTGAAAATTT+CGG | 0.195502 | 1_2:+19031241 | Msa0061050:CDS |
| TTGGTTATGTATCTCAGTTT+TGG | 0.224554 | 1_2:+19032268 | Msa0061050:three_prime_UTR |
| GGAAGCTGCAGCGGGTATTT+TGG | 0.228128 | 1_2:+19027857 | Msa0061050:CDS |
| GCAAAAGTCAATGCAATTAT+TGG | 0.230500 | 1_2:+19029389 | Msa0061050:CDS |
| AGGGAGTTTGGAGGGTGATT+TGG | 0.246859 | 1_2:-19026476 | None:intergenic |
| ACGTGGGTTGTATGACTTAT+AGG | 0.253698 | 1_2:-19029240 | None:intergenic |
| GGCGCATCAGAAGTACTTAT+TGG | 0.256084 | 1_2:+19029332 | Msa0061050:CDS |
| AGCAGGTGTTATTCCAAAAT+TGG | 0.260256 | 1_2:+19027923 | Msa0061050:CDS |
| GCCTTCTTAGATTCATTAAC+TGG | 0.272768 | 1_2:-19030808 | None:intergenic |
| TTTAACTGCATCTCTTTATT+GGG | 0.277302 | 1_2:-19030692 | None:intergenic |
| TGATTCTACTAGTGGATTCT+TGG | 0.279046 | 1_2:+19032249 | Msa0061050:three_prime_UTR |
| CGCATCTGTTCTTGAGTTTG+TGG | 0.296059 | 1_2:+19031148 | Msa0061050:CDS |
| TTAGTTCCTGTGCCATTAAT+AGG | 0.303101 | 1_2:+19029209 | Msa0061050:CDS |
| ATTTCTGTGGATATTGAAAA+TGG | 0.303359 | 1_2:+19031200 | Msa0061050:CDS |
| CCTGGCAAAGAGAGGGAGTT+TGG | 0.307481 | 1_2:-19026488 | None:intergenic |
| GGAAGGGGCTGTGTATTCTT+TGG | 0.309325 | 1_2:+19031929 | Msa0061050:CDS |
| GGTTGGAGGAAGAGGGTGTT+AGG | 0.316836 | 1_2:-19026378 | None:intergenic |
| CAATAAAGAGATGCAGTTAA+AGG | 0.319321 | 1_2:+19030694 | Msa0061050:CDS |
| CTTTCGATTTCTGTGCCATC+TGG | 0.319788 | 1_2:-19029284 | None:intergenic |
| ACTTCATTTGCTCAGGAGTT+TGG | 0.324562 | 1_2:+19032115 | Msa0061050:CDS |
| AACAAGCTATAATTACTCTT+TGG | 0.337922 | 1_2:+19027389 | Msa0061050:CDS |
| TAGGCTGCAGCACCTATTAA+TGG | 0.337954 | 1_2:-19029221 | None:intergenic |
| GTTAAACTAAGTTCTCTATC+TGG | 0.338525 | 1_2:+19031732 | Msa0061050:CDS |
| TATCTTCAATCGACCAATAT+AGG | 0.346902 | 1_2:+19027545 | Msa0061050:CDS |
| GCTGGCAGCGACGCAAGCTT+TGG | 0.349598 | 1_2:+19029700 | Msa0061050:CDS |
| GACAATATAATGCAATTTCC+TGG | 0.354985 | 1_2:+19027442 | Msa0061050:CDS |
| TGACAGAACAATTCTTCTTA+AGG | 0.360300 | 1_2:-19032069 | None:intergenic |
| AGGAAGAGGGTGTTAGGATT+GGG | 0.360457 | 1_2:-19026372 | None:intergenic |
| TCTGATGCGCCAAATTTAGA+AGG | 0.361169 | 1_2:-19029320 | None:intergenic |
| AGTGTTAAGGTTGGAGGAAG+AGG | 0.366186 | 1_2:-19026386 | None:intergenic |
| TGCGGAGCGTGTCAATGAAA+TGG | 0.369008 | 1_2:-19031653 | None:intergenic |
| TTCCCCTCCGCAGCAAAGAT+TGG | 0.377007 | 1_2:+19031694 | Msa0061050:CDS |
| AATGAATCTAAGAAGGCATT+TGG | 0.382340 | 1_2:+19030814 | Msa0061050:CDS |
| TCAATATCCACAGAAATAAT+CGG | 0.385085 | 1_2:-19031194 | None:intergenic |
| AATACTGTATAATCTTAGTA+TGG | 0.386852 | 1_2:+19032001 | Msa0061050:CDS |
| CCGAACTAGATTCTGCTCTA+AGG | 0.388734 | 1_2:-19027489 | None:intergenic |
| CTGCTACAGAATTCCTATAT+TGG | 0.391475 | 1_2:-19027558 | None:intergenic |
| GAGGAAGAGGGTGTTAGGAT+TGG | 0.392316 | 1_2:-19026373 | None:intergenic |
| TCCGACGAAGGGTCTGGAAC+TGG | 0.394882 | 1_2:+19026285 | Msa0061050:five_prime_UTR |
| AAGCTTGCGTCGCTGCCAGC+TGG | 0.396449 | 1_2:-19029697 | None:intergenic |
| TCTAATGACTTTAGATGCTT+CGG | 0.398255 | 1_2:-19029114 | None:intergenic |
| TTCCACAGGAGCTATTATTT+CGG | 0.403093 | 1_2:+19031908 | Msa0061050:CDS |
| CCAAACTCCCTCTCTTTGCC+AGG | 0.412759 | 1_2:+19026488 | Msa0061050:CDS |
| AGCTGGAGCTATTGCGGAAA+AGG | 0.415818 | 1_2:+19030535 | Msa0061050:CDS |
| TTGATCTGTTCTACAAGTCT+TGG | 0.426493 | 1_2:-19031810 | None:intergenic |
| TTCATTCTCTTTAGAAGCAC+AGG | 0.426809 | 1_2:+19031836 | Msa0061050:CDS |
| CATTCAGCACTTCTAGCTGC+TGG | 0.435416 | 1_2:+19032035 | Msa0061050:CDS |
| GCCTTGTTTGTTCGTATGCT+AGG | 0.436011 | 1_2:+19027340 | Msa0061050:CDS |
| CTCTTTAGAAGCACAGGAAA+AGG | 0.436036 | 1_2:+19031842 | Msa0061050:CDS |
| TATCAAGTGGATCATGATCT+AGG | 0.436132 | 1_2:-19027363 | None:intergenic |
| GGTGAATCATCTTCTGACTT+TGG | 0.442771 | 1_2:+19027304 | Msa0061050:CDS |
| TTACAGAATTCTTGTTATTG+AGG | 0.445107 | 1_2:+19029181 | Msa0061050:CDS |
| TTAGATGCTTCGGAGTCATA+TGG | 0.450507 | 1_2:-19029104 | None:intergenic |
| ATTTGAGGACAAAGTCTACT+TGG | 0.452312 | 1_2:+19032294 | Msa0061050:three_prime_UTR |
| TTCTTGTAAACTGGCTAAAG+AGG | 0.452634 | 1_2:-19031120 | None:intergenic |
| AGAACAATTCTTCTTAAGGC+TGG | 0.453913 | 1_2:-19032065 | None:intergenic |
| TCGGCTTGTGAGGCAGCTGC+AGG | 0.460226 | 1_2:+19027508 | Msa0061050:CDS |
| GCGGAGCGTGTCAATGAAAT+GGG | 0.462693 | 1_2:-19031652 | None:intergenic |
| AGGAATTCTGTAGCAGATAG+TGG | 0.465149 | 1_2:+19027565 | Msa0061050:CDS |
| ATTGCTGACACAATCTTCCT+TGG | 0.465619 | 1_2:+19027609 | Msa0061050:CDS |
| TTAAAACGCTCAGACGTAGC+TGG | 0.468741 | 1_2:+19030518 | Msa0061050:CDS |
| CAGGAAATAGATGAAGTAGA+AGG | 0.469292 | 1_2:+19027283 | Msa0061050:intron |
| CTTTGGCAATATTCACTTGG+TGG | 0.469366 | 1_2:+19027406 | Msa0061050:CDS |
| CCTTCGTCGGAAAACAAGAT+AGG | 0.472598 | 1_2:-19026273 | None:intergenic |
| ACATATGCGTATTGCATTCA+AGG | 0.476617 | 1_2:+19029619 | Msa0061050:CDS |
| AAAGGGCACTTCATTTGCTC+AGG | 0.479741 | 1_2:+19032108 | Msa0061050:CDS |
| AAGTAGACTTTGTCCTCAAA+TGG | 0.480683 | 1_2:-19032292 | None:intergenic |
| TCAAGGAGGCTGGTGCAGTT+AGG | 0.484639 | 1_2:+19029636 | Msa0061050:CDS |
| TCGTGTTGGTGCTATTGAAA+TGG | 0.486108 | 1_2:+19029436 | Msa0061050:CDS |
| GTGTTAAGGTTGGAGGAAGA+GGG | 0.486174 | 1_2:-19026385 | None:intergenic |
| CAATGATAATGCAGTCCAGC+TGG | 0.486189 | 1_2:+19029682 | Msa0061050:CDS |
| TCCCCTCCGCAGCAAAGATT+GGG | 0.486285 | 1_2:+19031695 | Msa0061050:CDS |
| CCTTAGAGCAGAATCTAGTT+CGG | 0.486396 | 1_2:+19027489 | Msa0061050:CDS |
| CGCGTCTGACACTCTTGCAT+TGG | 0.486741 | 1_2:+19029498 | Msa0061050:CDS |
| AGAATTCTTGTTATTGAGGA+AGG | 0.486981 | 1_2:+19029185 | Msa0061050:CDS |
| TGCTGCAGATATTGCAAGAC+CGG | 0.487218 | 1_2:-19031571 | None:intergenic |
| TATGTTTAGAAGAACATCCT+TGG | 0.490738 | 1_2:+19032204 | Msa0061050:three_prime_UTR |
| GCGCGAAATGAGAAGTGTTA+AGG | 0.491645 | 1_2:-19026399 | None:intergenic |
| GCATTTGGTGGAGCCGATGA+TGG | 0.492074 | 1_2:+19030829 | Msa0061050:CDS |
| TTTGCTGCGGAGGGGAATAT+GGG | 0.494178 | 1_2:-19031688 | None:intergenic |
| ATTGAAGAAGGTAGTGAAAG+AGG | 0.498186 | 1_2:+19031960 | Msa0061050:CDS |
| TACCCAATCTTTGCTGCGGA+GGG | 0.498761 | 1_2:-19031697 | None:intergenic |
| TTGGAAACATGACGAGTCCA+TGG | 0.503224 | 1_2:+19032134 | Msa0061050:exon |
| CGTATTGCATTCAAGGAGGC+TGG | 0.506096 | 1_2:+19029626 | Msa0061050:CDS |
| CGAGGAAGAGAGAGTGACTC+TGG | 0.507018 | 1_2:-19026446 | None:intergenic |
| AGCATCTAAAGTCATTAGAA+AGG | 0.509035 | 1_2:+19029118 | Msa0061050:CDS |
| TAATTCCTTTGATCCATCAT+CGG | 0.513509 | 1_2:-19030842 | None:intergenic |
| ACTCGTAGTTGCAGCAATAA+CGG | 0.516523 | 1_2:+19026514 | Msa0061050:CDS |
| CAACAATTCCTTGTTCGTGT+TGG | 0.517289 | 1_2:+19029422 | Msa0061050:CDS |
| ATGAGAAGTGTTAAGGTTGG+AGG | 0.518276 | 1_2:-19026392 | None:intergenic |
| AGTGTAACTTCTACGTTGAT+CGG | 0.520501 | 1_2:-19031774 | None:intergenic |
| ACAATCTTCCTTGGCTTCTG+AGG | 0.520554 | 1_2:+19027618 | Msa0061050:CDS |
| CTTTCATATCCTCATCATCA+AGG | 0.521881 | 1_2:-19027830 | None:intergenic |
| CTACCCAATCTTTGCTGCGG+AGG | 0.523971 | 1_2:-19031698 | None:intergenic |
| TGTTTAAAGATTCCTTCCCA+TGG | 0.524675 | 1_2:-19032151 | None:intergenic |
| CCATGATGTCATGGTTAACA+TGG | 0.527085 | 1_2:-19027896 | None:intergenic |
| GCTGCAACTACGAGTGAACC+TGG | 0.528924 | 1_2:-19026506 | None:intergenic |
| TGTACCGGTGAGTCGATGGC+TGG | 0.528946 | 1_2:+19032451 | Msa0061050:three_prime_UTR |
| GAAATAATCGGACTCAGTGT+TGG | 0.530686 | 1_2:-19031182 | None:intergenic |
| ACTCTTTGGCAATATTCACT+TGG | 0.531474 | 1_2:+19027403 | Msa0061050:CDS |
| CATGACATCATGGTTGAAGC+AGG | 0.531883 | 1_2:+19027906 | Msa0061050:CDS |
| ATTCAGCACTTCTAGCTGCT+GGG | 0.532272 | 1_2:+19032036 | Msa0061050:CDS |
| GAACAATTCTTCTTAAGGCT+GGG | 0.533123 | 1_2:-19032064 | None:intergenic |
| TTGGTGAAGCTGATTGAAGA+AGG | 0.533346 | 1_2:+19031948 | Msa0061050:CDS |
| ATAGCTTGTTCTCTATCAAG+TGG | 0.535682 | 1_2:-19027376 | None:intergenic |
| CACCCTCGGTTTCAATCACT+CGG | 0.536142 | 1_2:-19030472 | None:intergenic |
| ACACTCTTGCATTGGATCGA+CGG | 0.536563 | 1_2:+19029506 | Msa0061050:CDS |
| ACAGGAGCTATTATTTCGGA+AGG | 0.538014 | 1_2:+19031912 | Msa0061050:CDS |
| CTTTGGAAAAGCTGTCTGCT+AGG | 0.538845 | 1_2:+19029717 | Msa0061050:CDS |
| AGGAGCTATTATTTCGGAAG+GGG | 0.539631 | 1_2:+19031914 | Msa0061050:CDS |
| ACCAGTTAATGAATCTAAGA+AGG | 0.539869 | 1_2:+19030807 | Msa0061050:CDS |
| TGATTCTAGAACTAGAAGAT+AGG | 0.541102 | 1_2:+19029546 | Msa0061050:CDS |
| ATTTGCTATTGAACTTGAAG+AGG | 0.541577 | 1_2:+19031548 | Msa0061050:CDS |
| GTGCAGTTAGGCATTTAGTA+CGG | 0.544923 | 1_2:+19029648 | Msa0061050:CDS |
| GAATCTAAGAAGGCATTTGG+TGG | 0.547826 | 1_2:+19030817 | Msa0061050:CDS |
| AGCAAGTTACATCTTTGTAC+CGG | 0.554400 | 1_2:+19032436 | Msa0061050:three_prime_UTR |
| CTTAGTAGAATAGTATCTGA+AGG | 0.555239 | 1_2:+19031876 | Msa0061050:CDS |
| TTCCTATACCTCAGAAGCCA+AGG | 0.555612 | 1_2:-19027626 | None:intergenic |
| GAAGGGGTGGTAGATTCCAC+AGG | 0.559231 | 1_2:+19031894 | Msa0061050:CDS |
| AGAATCTAGTTCGGCTTGTG+AGG | 0.559361 | 1_2:+19027498 | Msa0061050:CDS |
| GCTATTGAACTTGAAGAGGC+CGG | 0.561458 | 1_2:+19031552 | Msa0061050:CDS |
| TCTGTGCCATCTGGAAATGT+AGG | 0.569674 | 1_2:-19029275 | None:intergenic |
| TCTTTGTACCGGTGAGTCGA+TGG | 0.571158 | 1_2:+19032447 | Msa0061050:three_prime_UTR |
| ATAGAGAACTTAGTTTAACT+AGG | 0.573283 | 1_2:-19031728 | None:intergenic |
| TAGAATAGTATCTGAAGGGG+TGG | 0.574461 | 1_2:+19031881 | Msa0061050:CDS |
| ACTGAGTCCGATTATTTCTG+TGG | 0.577062 | 1_2:+19031187 | Msa0061050:CDS |
| AGACGTAGCTGGAGCTATTG+CGG | 0.580587 | 1_2:+19030529 | Msa0061050:CDS |
| GGCAAAGAGAGGGAGTTTGG+AGG | 0.581474 | 1_2:-19026485 | None:intergenic |
| TTTGAGGACAAAGTCTACTT+GGG | 0.581534 | 1_2:+19032295 | Msa0061050:three_prime_UTR |
| GGGTGATTTGGAAGAGTACG+AGG | 0.582661 | 1_2:-19026464 | None:intergenic |
| ACAACCAGCCATCGACTCAC+CGG | 0.582683 | 1_2:-19032455 | None:intergenic |
| CAGGAGCTATTATTTCGGAA+GGG | 0.582745 | 1_2:+19031913 | Msa0061050:CDS |
| CCATGTTAACCATGACATCA+TGG | 0.583441 | 1_2:+19027896 | Msa0061050:CDS |
| GGTCATTCTGATCACTCCGC+TGG | 0.584009 | 1_2:+19026535 | Msa0061050:CDS |
| CAGCAGCTAGAAGTGCTGAA+TGG | 0.585525 | 1_2:-19032034 | None:intergenic |
| TTAGTAGAATAGTATCTGAA+GGG | 0.587830 | 1_2:+19031877 | Msa0061050:CDS |
| GCAAAGAGAGGGAGTTTGGA+GGG | 0.589171 | 1_2:-19026484 | None:intergenic |
| CTGCTTCAACCATGATGTCA+TGG | 0.590843 | 1_2:-19027905 | None:intergenic |
| ATAATTGGTTATCAATGATG+AGG | 0.593044 | 1_2:+19032351 | Msa0061050:three_prime_UTR |
| CAATAGCACCAACACGAACA+AGG | 0.593972 | 1_2:-19029430 | None:intergenic |
| GCAGCACCTATTAATGGCAC+AGG | 0.594699 | 1_2:-19029215 | None:intergenic |
| AAAGTGAAGGAAGCTGCAGC+GGG | 0.596369 | 1_2:+19027849 | Msa0061050:CDS |
| TATGAAGTACCTTGATGATG+AGG | 0.596634 | 1_2:+19027821 | Msa0061050:CDS |
| GAAAGTGAAGGAAGCTGCAG+CGG | 0.599166 | 1_2:+19027848 | Msa0061050:CDS |
| TAAAGGAGCTAAACCACCCT+CGG | 0.600173 | 1_2:-19030486 | None:intergenic |
| TGCATTGCTAGAACTTGTGA+AGG | 0.603172 | 1_2:+19029151 | Msa0061050:CDS |
| TTCCGAAATAATAGCTCCTG+TGG | 0.603640 | 1_2:-19031910 | None:intergenic |
| CGAGTGAACCTGGCAAAGAG+AGG | 0.604709 | 1_2:-19026496 | None:intergenic |
| TGGAGCCGATGATGGATCAA+AGG | 0.607714 | 1_2:+19030837 | Msa0061050:CDS |
| TTCAGCACTTCTAGCTGCTG+GGG | 0.609035 | 1_2:+19032037 | Msa0061050:CDS |
| AACTAGATTCTGCTCTAAGG+AGG | 0.611088 | 1_2:-19027486 | None:intergenic |
| TGGAAACATGACGAGTCCAT+GGG | 0.614382 | 1_2:+19032135 | Msa0061050:exon |
| ACCCAATCTTTGCTGCGGAG+GGG | 0.616154 | 1_2:-19031696 | None:intergenic |
| CGAGTGATTGAAACCGAGGG+TGG | 0.618745 | 1_2:+19030473 | Msa0061050:CDS |
| TGAAGTGCCCTTTGCCACTG+TGG | 0.620491 | 1_2:-19032098 | None:intergenic |
| TCCAGTTCCAGACCCTTCGT+CGG | 0.620804 | 1_2:-19026286 | None:intergenic |
| GAAATGAGAAGTGTTAAGGT+TGG | 0.621861 | 1_2:-19026395 | None:intergenic |
| AAGTCATTAGAAAGGAAGCA+AGG | 0.621933 | 1_2:+19029126 | Msa0061050:CDS |
| GCCTAGCATACGAACAAACA+AGG | 0.626275 | 1_2:-19027341 | None:intergenic |
| TTGAAGATAGTGATTGCAGA+AGG | 0.627279 | 1_2:-19027531 | None:intergenic |
| GAGTGAACCTGGCAAAGAGA+GGG | 0.627352 | 1_2:-19026495 | None:intergenic |
| TGCCGAGTGATTGAAACCGA+GGG | 0.634638 | 1_2:+19030470 | Msa0061050:CDS |
| GAGCGTGTCAATGAAATGGG+AGG | 0.636528 | 1_2:-19031649 | None:intergenic |
| AGCGTGTCAATGAAATGGGA+GGG | 0.637506 | 1_2:-19031648 | None:intergenic |
| CAGATGGCACAGAAATCGAA+AGG | 0.639899 | 1_2:+19029285 | Msa0061050:CDS |
| CAGCTACCCAATCTTTGCTG+CGG | 0.649246 | 1_2:-19031701 | None:intergenic |
| CACAAACTCAAGAACAGATG+CGG | 0.650980 | 1_2:-19031147 | None:intergenic |
| TAGTAGAATAGTATCTGAAG+GGG | 0.655599 | 1_2:+19031878 | Msa0061050:CDS |
| CCGTATCGAAAACAAACCCA+AGG | 0.657158 | 1_2:+19030881 | Msa0061050:CDS |
| AACATGACGAGTCCATGGGA+AGG | 0.664260 | 1_2:+19032139 | Msa0061050:exon |
| CAATGCAAGAGTGTCAGACG+CGG | 0.664864 | 1_2:-19029497 | None:intergenic |
| GAGGCACCTACATTTCCAGA+TGG | 0.669327 | 1_2:+19029269 | Msa0061050:CDS |
| TTGCCGAGTGATTGAAACCG+AGG | 0.671670 | 1_2:+19030469 | Msa0061050:CDS |
| TGATGAGGATATGAAAGTGA+AGG | 0.675412 | 1_2:+19027836 | Msa0061050:CDS |
| ACAACAAGATTAATACAACC+AGG | 0.686889 | 1_2:-19027460 | None:intergenic |
| TGACTTTGGTGATAGCTACG+TGG | 0.692051 | 1_2:+19027318 | Msa0061050:CDS |
| GTAGGTGCCTCGTATAAACG+TGG | 0.694802 | 1_2:-19029257 | None:intergenic |
| TAGGTGCCTCGTATAAACGT+GGG | 0.703603 | 1_2:-19029256 | None:intergenic |
| AGGACTTCAAAATCTCCACA+AGG | 0.708917 | 1_2:-19031100 | None:intergenic |
| ATACAACCCACGTTTATACG+AGG | 0.716852 | 1_2:+19029250 | Msa0061050:CDS |
| AGCAGAGACAGAATCTGACG+TGG | 0.737628 | 1_2:+19031506 | Msa0061050:intron |
| TTGCAATATCTGCAGCATCG+CGG | 0.740478 | 1_2:+19031577 | Msa0061050:CDS |
| TATGCGTATTGCATTCAAGG+AGG | 0.753564 | 1_2:+19029622 | Msa0061050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATTTCATATAAATAA+AGG | + | chr1_2:19028767-19028786 | Msa0061050:intron | 10.0% |
| !!! | GTTCAAAATATATTTTTTTA+GGG | - | chr1_2:19028819-19028838 | None:intergenic | 10.0% |
| !!! | AGTTCAAAATATATTTTTTT+AGG | - | chr1_2:19028820-19028839 | None:intergenic | 10.0% |
| !! | AAAAAAATGAAATTCTAAAT+AGG | - | chr1_2:19030740-19030759 | None:intergenic | 10.0% |
| !!! | TTGTCTAAAATATTATAATG+TGG | + | chr1_2:19027125-19027144 | Msa0061050:intron | 15.0% |
| !! | TAATTAGTATACAAAAACTT+TGG | + | chr1_2:19027650-19027669 | Msa0061050:intron | 15.0% |
| !! | TATATCAAGAATTATAAAAC+TGG | - | chr1_2:19027994-19028013 | None:intergenic | 15.0% |
| !!! | AAATTATATGGTTCTAATTA+GGG | + | chr1_2:19028398-19028417 | Msa0061050:intron | 15.0% |
| !!! | ACTTAACAAGATTTTAATTT+TGG | + | chr1_2:19030621-19030640 | Msa0061050:intron | 15.0% |
| !! | TGTGAAATTAAGAAAATGAT+GGG | - | chr1_2:19026591-19026610 | None:intergenic | 20.0% |
| !! | CATATTATGATTTACAATAG+TGG | - | chr1_2:19026747-19026766 | None:intergenic | 20.0% |
| !! | GTAAATCATAATATGTTCAT+TGG | + | chr1_2:19026752-19026771 | Msa0061050:intron | 20.0% |
| !!! | GAAATTATATGGTTCTAATT+AGG | + | chr1_2:19028397-19028416 | Msa0061050:intron | 20.0% |
| !!! | TAAATTATGTATGCTTTGAA+TGG | + | chr1_2:19028627-19028646 | Msa0061050:intron | 20.0% |
| !! | AAGAGACAAATATAAACTTA+GGG | - | chr1_2:19028742-19028761 | None:intergenic | 20.0% |
| !! | AAAGAGACAAATATAAACTT+AGG | - | chr1_2:19028743-19028762 | None:intergenic | 20.0% |
| !!! | ATGAGTTTTTATCTTAATTC+AGG | + | chr1_2:19029070-19029089 | Msa0061050:intron | 20.0% |
| !! | TATAACAAACCTTCTAAATT+TGG | + | chr1_2:19029311-19029330 | Msa0061050:CDS | 20.0% |
| !!! | TACAACAATAGAGTATATTT+TGG | + | chr1_2:19029792-19029811 | Msa0061050:intron | 20.0% |
| !!! | ATGAAAGAAAGTACTTTATA+AGG | - | chr1_2:19029837-19029856 | None:intergenic | 20.0% |
| !! | CATTGTAAACAGAAAAATTA+AGG | + | chr1_2:19029854-19029873 | Msa0061050:intron | 20.0% |
| !! | AGAAACAATTGTACATATAA+CGG | + | chr1_2:19030125-19030144 | Msa0061050:intron | 20.0% |
| !! | AAGGGATATTATACAAATTA+TGG | + | chr1_2:19030151-19030170 | Msa0061050:intron | 20.0% |
| !!! | AGTTTGTATTTTCTGTTATA+TGG | + | chr1_2:19030233-19030252 | Msa0061050:intron | 20.0% |
| !!! | ATGTTTTGGAAAATGAAATA+GGG | + | chr1_2:19030318-19030337 | Msa0061050:intron | 20.0% |
| !!! | CGTTTTAAAATACTAACTAA+AGG | - | chr1_2:19030506-19030525 | None:intergenic | 20.0% |
| !! | TCTTATATGTTAACTAATTC+TGG | + | chr1_2:19030573-19030592 | Msa0061050:intron | 20.0% |
| !! | TAAACATTGTAAAACGAAAA+TGG | - | chr1_2:19031303-19031322 | None:intergenic | 20.0% |
| !! | AATACTGTATAATCTTAGTA+TGG | + | chr1_2:19032001-19032020 | Msa0061050:CDS | 20.0% |
| !!! | CAAAATACCTTTTACAAATA+AGG | - | chr1_2:19032231-19032250 | None:intergenic | 20.0% |
| ! | GTGTGAAATTAAGAAAATGA+TGG | - | chr1_2:19026592-19026611 | None:intergenic | 25.0% |
| ! | AGTGTTATGTTATGTTTAAC+TGG | + | chr1_2:19026820-19026839 | Msa0061050:intron | 25.0% |
| ! | GAGAGAAGAACTTAAATAAA+CGG | + | chr1_2:19026940-19026959 | Msa0061050:intron | 25.0% |
| ! | AACAAGCTATAATTACTCTT+TGG | + | chr1_2:19027389-19027408 | Msa0061050:CDS | 25.0% |
| ! | GTGTAGAAAATGAGAATATT+TGG | + | chr1_2:19027691-19027710 | Msa0061050:intron | 25.0% |
| ! | TTAAACTACTATACATAAGC+AGG | - | chr1_2:19028214-19028233 | None:intergenic | 25.0% |
| ! | GGAACGTATCAAAATAAATT+TGG | - | chr1_2:19028272-19028291 | None:intergenic | 25.0% |
| ! | AACATTTCTGTTGAGATTTA+GGG | - | chr1_2:19028881-19028900 | None:intergenic | 25.0% |
| ! | TAACATTTCTGTTGAGATTT+AGG | - | chr1_2:19028882-19028901 | None:intergenic | 25.0% |
| !!! | CAGAATGTCATTATTTCTAA+TGG | - | chr1_2:19028943-19028962 | None:intergenic | 25.0% |
| !! | GTTTACTGATATTTTTCCTT+TGG | + | chr1_2:19028965-19028984 | Msa0061050:intron | 25.0% |
| ! | TCAGTAAAATTCAATACCAA+AGG | - | chr1_2:19028984-19029003 | None:intergenic | 25.0% |
| !! | GATAAAAACTCATCACATTT+TGG | - | chr1_2:19029063-19029082 | None:intergenic | 25.0% |
| !!! | TTACAGAATTCTTGTTATTG+AGG | + | chr1_2:19029181-19029200 | Msa0061050:CDS | 25.0% |
| ! | ATAAGAAATTATCAGTTGAC+AGG | + | chr1_2:19029928-19029947 | Msa0061050:intron | 25.0% |
| ! | TAAGAAATTATCAGTTGACA+GGG | + | chr1_2:19029929-19029948 | Msa0061050:intron | 25.0% |
| !!! | TTTCCTTATTTTGTGGTTTT+AGG | - | chr1_2:19030082-19030101 | None:intergenic | 25.0% |
| !! | ATTGTACATATAACGGAAAA+AGG | + | chr1_2:19030132-19030151 | Msa0061050:intron | 25.0% |
| !! | TTGTACATATAACGGAAAAA+GGG | + | chr1_2:19030133-19030152 | Msa0061050:intron | 25.0% |
| ! | GAAAATACAAACTTACCATA+GGG | - | chr1_2:19030226-19030245 | None:intergenic | 25.0% |
| ! | AGAAAATACAAACTTACCAT+AGG | - | chr1_2:19030227-19030246 | None:intergenic | 25.0% |
| ! | AAATGAAAAGAAGAAGATAG+AGG | + | chr1_2:19030268-19030287 | Msa0061050:intron | 25.0% |
| ! | AATGAAAAGAAGAAGATAGA+GGG | + | chr1_2:19030269-19030288 | Msa0061050:intron | 25.0% |
| !!! | GATGTTTTGGAAAATGAAAT+AGG | + | chr1_2:19030317-19030336 | Msa0061050:intron | 25.0% |
| ! | TATGCTATGAATTGCTAAAA+TGG | + | chr1_2:19030376-19030395 | Msa0061050:intron | 25.0% |
| ! | GCAAAAGCTAAAATATAAAC+TGG | + | chr1_2:19030595-19030614 | Msa0061050:intron | 25.0% |
| ! | TTTAACTGCATCTCTTTATT+GGG | - | chr1_2:19030695-19030714 | None:intergenic | 25.0% |
| !!! | GATTCTTTTCAGTTTTATGA+TGG | + | chr1_2:19030784-19030803 | Msa0061050:intron | 25.0% |
| ! | TTCATCTATATACAGTTACA+AGG | + | chr1_2:19030955-19030974 | Msa0061050:intron | 25.0% |
| ! | CTGAAAAGTTTAGTTAACAT+TGG | + | chr1_2:19031017-19031036 | Msa0061050:intron | 25.0% |
| ! | TTTCTCTTCAATAAAACATC+AGG | + | chr1_2:19031045-19031064 | Msa0061050:intron | 25.0% |
| ! | TCAATATCCACAGAAATAAT+CGG | - | chr1_2:19031197-19031216 | None:intergenic | 25.0% |
| ! | ATTTCTGTGGATATTGAAAA+TGG | + | chr1_2:19031200-19031219 | Msa0061050:CDS | 25.0% |
| ! | GCAAAATCTCTTGAAAATTT+CGG | + | chr1_2:19031241-19031260 | Msa0061050:CDS | 25.0% |
| ! | CAAAATCTCTTGAAAATTTC+GGG | + | chr1_2:19031242-19031261 | Msa0061050:CDS | 25.0% |
| ! | AAATCACACTCAAATTGAAA+GGG | - | chr1_2:19031367-19031386 | None:intergenic | 25.0% |
| ! | AAAATCACACTCAAATTGAA+AGG | - | chr1_2:19031368-19031387 | None:intergenic | 25.0% |
| ! | ATAGAGAACTTAGTTTAACT+AGG | - | chr1_2:19031731-19031750 | None:intergenic | 25.0% |
| ! | TTAGTAGAATAGTATCTGAA+GGG | + | chr1_2:19031877-19031896 | Msa0061050:CDS | 25.0% |
| ! | AACTCGAGAAATTCTATAAT+TGG | + | chr1_2:19032336-19032355 | Msa0061050:three_prime_UTR | 25.0% |
| ! | ATAATTGGTTATCAATGATG+AGG | + | chr1_2:19032351-19032370 | Msa0061050:three_prime_UTR | 25.0% |
| ! | ATTGTTGTTGTTGTTGTTGA+GGG | - | chr1_2:19026424-19026443 | None:intergenic | 30.0% |
| ! | TATTGTTGTTGTTGTTGTTG+AGG | - | chr1_2:19026425-19026444 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr1_2:19027012-19027031 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTTAGCCTCTTTG+TGG | + | chr1_2:19027198-19027217 | Msa0061050:intron | 30.0% |
| ! | AATGCTTGAATTTTGCTTTC+AGG | + | chr1_2:19027264-19027283 | Msa0061050:intron | 30.0% |
| GACAATATAATGCAATTTCC+TGG | + | chr1_2:19027442-19027461 | Msa0061050:CDS | 30.0% | |
| ACAACAAGATTAATACAACC+AGG | - | chr1_2:19027463-19027482 | None:intergenic | 30.0% | |
| TATCTTCAATCGACCAATAT+AGG | + | chr1_2:19027545-19027564 | Msa0061050:CDS | 30.0% | |
| !!! | TATTTGGAACTCTTTTTTGC+AGG | + | chr1_2:19027707-19027726 | Msa0061050:intron | 30.0% |
| ! | TTTCAATGTCTCACCAATTT+TGG | - | chr1_2:19027939-19027958 | None:intergenic | 30.0% |
| AGGTGCAAACACATAAATTA+TGG | - | chr1_2:19028062-19028081 | None:intergenic | 30.0% | |
| TTTGATGTTGTATAAAAGCC+TGG | + | chr1_2:19028114-19028133 | Msa0061050:intron | 30.0% | |
| GAATCTATTTGGTCTATTCA+TGG | + | chr1_2:19028348-19028367 | Msa0061050:intron | 30.0% | |
| GAGGCAATGTTGAAATTATA+TGG | + | chr1_2:19028386-19028405 | Msa0061050:intron | 30.0% | |
| !! | TATATGGTTCTAATTAGGGA+AGG | + | chr1_2:19028402-19028421 | Msa0061050:intron | 30.0% |
| AGGAGGAAAAAAGATAGTTA+AGG | + | chr1_2:19028422-19028441 | Msa0061050:intron | 30.0% | |
| !! | ATTTTTAAGCTTGTGCAGTT+GGG | - | chr1_2:19028484-19028503 | None:intergenic | 30.0% |
| ! | AGTATCGTGGATAATCTTTT+AGG | - | chr1_2:19028525-19028544 | None:intergenic | 30.0% |
| !! | ATCTTCAGAATAAAGTATCG+TGG | - | chr1_2:19028538-19028557 | None:intergenic | 30.0% |
| ATCGATACTCTAATGAAGTT+TGG | + | chr1_2:19028569-19028588 | Msa0061050:intron | 30.0% | |
| ! | ATTATGTATGCTTTGAATGG+AGG | + | chr1_2:19028630-19028649 | Msa0061050:intron | 30.0% |
| ! | TTATGTATGCTTTGAATGGA+GGG | + | chr1_2:19028631-19028650 | Msa0061050:intron | 30.0% |
| TTTCCATTCAACTTATCAGA+AGG | - | chr1_2:19028914-19028933 | None:intergenic | 30.0% | |
| ! | TCTGATAAGTTGAATGGAAA+AGG | + | chr1_2:19028914-19028933 | Msa0061050:intron | 30.0% |
| ATTCTCATAGTTCTTACCAA+AGG | + | chr1_2:19029011-19029030 | Msa0061050:intron | 30.0% | |
| TCTAATGACTTTAGATGCTT+CGG | - | chr1_2:19029117-19029136 | None:intergenic | 30.0% | |
| ! | AGCATCTAAAGTCATTAGAA+AGG | + | chr1_2:19029118-19029137 | Msa0061050:CDS | 30.0% |
| !! | AGAATTCTTGTTATTGAGGA+AGG | + | chr1_2:19029185-19029204 | Msa0061050:CDS | 30.0% |
| GCAAAAGTCAATGCAATTAT+TGG | + | chr1_2:19029389-19029408 | Msa0061050:CDS | 30.0% | |
| !! | TGATTCTAGAACTAGAAGAT+AGG | + | chr1_2:19029546-19029565 | Msa0061050:CDS | 30.0% |
| TGTCCTAAAACCACAAAATA+AGG | + | chr1_2:19030076-19030095 | Msa0061050:intron | 30.0% | |
| !!! | GGATTCATTTCCTTATTTTG+TGG | - | chr1_2:19030089-19030108 | None:intergenic | 30.0% |
| TGAATCCTATTCCAGAATTA+AGG | + | chr1_2:19030102-19030121 | Msa0061050:intron | 30.0% | |
| !! | TTTCTCCTTAATTCTGGAAT+AGG | - | chr1_2:19030110-19030129 | None:intergenic | 30.0% |
| ! | CAATTGTTTCTCCTTAATTC+TGG | - | chr1_2:19030116-19030135 | None:intergenic | 30.0% |
| AGTATCATTTAGATGGTGAA+AGG | + | chr1_2:19030196-19030215 | Msa0061050:intron | 30.0% | |
| TTTGGAAAATGAAATAGGGA+TGG | + | chr1_2:19030322-19030341 | Msa0061050:intron | 30.0% | |
| CTTTAACTGCATCTCTTTAT+TGG | - | chr1_2:19030696-19030715 | None:intergenic | 30.0% | |
| CAATAAAGAGATGCAGTTAA+AGG | + | chr1_2:19030694-19030713 | Msa0061050:CDS | 30.0% | |
| AATGTACTTGACAATCAATG+AGG | - | chr1_2:19030764-19030783 | None:intergenic | 30.0% | |
| ACCAGTTAATGAATCTAAGA+AGG | + | chr1_2:19030807-19030826 | Msa0061050:CDS | 30.0% | |
| !! | AATGAATCTAAGAAGGCATT+TGG | + | chr1_2:19030814-19030833 | Msa0061050:CDS | 30.0% |
| TAATTCCTTTGATCCATCAT+CGG | - | chr1_2:19030845-19030864 | None:intergenic | 30.0% | |
| !! | ATATCCTTTTAGCTAACCTT+GGG | - | chr1_2:19030900-19030919 | None:intergenic | 30.0% |
| TAAAAGGATATGAACCACAA+GGG | + | chr1_2:19030909-19030928 | Msa0061050:intron | 30.0% | |
| AATTTCTGCTCTTTAATGTG+TGG | + | chr1_2:19031270-19031289 | Msa0061050:intron | 30.0% | |
| ! | TGATTTTTGCTAGTGGAAAA+AGG | + | chr1_2:19031381-19031400 | Msa0061050:intron | 30.0% |
| !! | ATTTGCTATTGAACTTGAAG+AGG | + | chr1_2:19031548-19031567 | Msa0061050:CDS | 30.0% |
| GTTAAACTAAGTTCTCTATC+TGG | + | chr1_2:19031732-19031751 | Msa0061050:CDS | 30.0% | |
| CTTAGTAGAATAGTATCTGA+AGG | + | chr1_2:19031876-19031895 | Msa0061050:CDS | 30.0% | |
| TAGTAGAATAGTATCTGAAG+GGG | + | chr1_2:19031878-19031897 | Msa0061050:CDS | 30.0% | |
| TGACAGAACAATTCTTCTTA+AGG | - | chr1_2:19032072-19032091 | None:intergenic | 30.0% | |
| TATGTTTAGAAGAACATCCT+TGG | + | chr1_2:19032204-19032223 | Msa0061050:three_prime_UTR | 30.0% | |
| !!! | AGGTATTTTGATTCTACTAG+TGG | + | chr1_2:19032241-19032260 | Msa0061050:three_prime_UTR | 30.0% |
| ! | TTGGTTATGTATCTCAGTTT+TGG | + | chr1_2:19032268-19032287 | Msa0061050:three_prime_UTR | 30.0% |
| ! | TGGTTATGTATCTCAGTTTT+GGG | + | chr1_2:19032269-19032288 | Msa0061050:three_prime_UTR | 30.0% |
| !! | GAAATGAGAAGTGTTAAGGT+TGG | - | chr1_2:19026398-19026417 | None:intergenic | 35.0% |
| ! | TGGGTTGAGATTAAAACTCA+CGG | - | chr1_2:19026572-19026591 | None:intergenic | 35.0% |
| AACTGAACTGAAGCAAAATG+TGG | - | chr1_2:19026628-19026647 | None:intergenic | 35.0% | |
| AGAAGTGATTCAGTTATGGA+AGG | - | chr1_2:19026656-19026675 | None:intergenic | 35.0% | |
| CAAGAGAAGTGATTCAGTTA+TGG | - | chr1_2:19026660-19026679 | None:intergenic | 35.0% | |
| ACAGATAAGTCAATCCAAAC+AGG | - | chr1_2:19026884-19026903 | None:intergenic | 35.0% | |
| CAGGAAATAGATGAAGTAGA+AGG | + | chr1_2:19027283-19027302 | Msa0061050:intron | 35.0% | |
| TATCAAGTGGATCATGATCT+AGG | - | chr1_2:19027366-19027385 | None:intergenic | 35.0% | |
| !! | ATAGCTTGTTCTCTATCAAG+TGG | - | chr1_2:19027379-19027398 | None:intergenic | 35.0% |
| ACTCTTTGGCAATATTCACT+TGG | + | chr1_2:19027403-19027422 | Msa0061050:CDS | 35.0% | |
| TTGAAGATAGTGATTGCAGA+AGG | - | chr1_2:19027534-19027553 | None:intergenic | 35.0% | |
| CTGCTACAGAATTCCTATAT+TGG | - | chr1_2:19027561-19027580 | None:intergenic | 35.0% | |
| !!! | GAACTCTTTTTTGCAGGTAA+AGG | + | chr1_2:19027713-19027732 | Msa0061050:intron | 35.0% |
| ! | CGCTCTTTGCAATTTTTACT+CGG | - | chr1_2:19027785-19027804 | None:intergenic | 35.0% |
| !! | TATGAAGTACCTTGATGATG+AGG | + | chr1_2:19027821-19027840 | Msa0061050:CDS | 35.0% |
| CTTTCATATCCTCATCATCA+AGG | - | chr1_2:19027833-19027852 | None:intergenic | 35.0% | |
| TGATGAGGATATGAAAGTGA+AGG | + | chr1_2:19027836-19027855 | Msa0061050:CDS | 35.0% | |
| !! | AGCAGGTGTTATTCCAAAAT+TGG | + | chr1_2:19027923-19027942 | Msa0061050:CDS | 35.0% |
| ATTGGTGAGACATTGAAAGA+TGG | + | chr1_2:19027941-19027960 | Msa0061050:intron | 35.0% | |
| CACCTAAAACATTATGCTCT+CGG | + | chr1_2:19028077-19028096 | Msa0061050:intron | 35.0% | |
| ACCTAAAACATTATGCTCTC+GGG | + | chr1_2:19028078-19028097 | Msa0061050:intron | 35.0% | |
| !!! | GGAACTTGGCAGTTTTTTTT+TGG | + | chr1_2:19028155-19028174 | Msa0061050:intron | 35.0% |
| !!! | TTGGCAGTTTTTTTTTGGAG+AGG | + | chr1_2:19028160-19028179 | Msa0061050:intron | 35.0% |
| !!! | TGGCAGTTTTTTTTTGGAGA+GGG | + | chr1_2:19028161-19028180 | Msa0061050:intron | 35.0% |
| ACATAAGCTACCTTCTATAG+TGG | + | chr1_2:19028188-19028207 | Msa0061050:intron | 35.0% | |
| ACGTTCCTATAGAAAATACG+AGG | + | chr1_2:19028285-19028304 | Msa0061050:intron | 35.0% | |
| ! | TGGATCCTCGTATTTTCTAT+AGG | - | chr1_2:19028293-19028312 | None:intergenic | 35.0% |
| GAATCATGAGTCAATCTTCT+TGG | - | chr1_2:19028313-19028332 | None:intergenic | 35.0% | |
| ACTCATGATTCTATGCATGT+TGG | + | chr1_2:19028322-19028341 | Msa0061050:intron | 35.0% | |
| CATGTTGGAACGAATCTATT+TGG | + | chr1_2:19028337-19028356 | Msa0061050:intron | 35.0% | |
| ! | GTTAAGGCTAATTTTGTGCA+AGG | + | chr1_2:19028438-19028457 | Msa0061050:intron | 35.0% |
| !! | GATTTTTAAGCTTGTGCAGT+TGG | - | chr1_2:19028485-19028504 | None:intergenic | 35.0% |
| ! | TATGTATGCTTTGAATGGAG+GGG | + | chr1_2:19028632-19028651 | Msa0061050:intron | 35.0% |
| TTCTGTTGAGATTTAGGGAT+CGG | - | chr1_2:19028876-19028895 | None:intergenic | 35.0% | |
| ! | TGTTCTAAGCATCAAGAGAA+AGG | - | chr1_2:19029038-19029057 | None:intergenic | 35.0% |
| AAGTCATTAGAAAGGAAGCA+AGG | + | chr1_2:19029126-19029145 | Msa0061050:CDS | 35.0% | |
| ! | TTAGTTCCTGTGCCATTAAT+AGG | + | chr1_2:19029209-19029228 | Msa0061050:CDS | 35.0% |
| ACATATGCGTATTGCATTCA+AGG | + | chr1_2:19029619-19029638 | Msa0061050:CDS | 35.0% | |
| !! | GATAACCATTCTAGGGTTAA+GGG | + | chr1_2:19030043-19030062 | Msa0061050:intron | 35.0% |
| TATTTCCCTTAACCCTAGAA+TGG | - | chr1_2:19030051-19030070 | None:intergenic | 35.0% | |
| GTACAGCAGTATCATTTAGA+TGG | + | chr1_2:19030189-19030208 | Msa0061050:intron | 35.0% | |
| AAGCCAACCATTGCATAATA+CGG | + | chr1_2:19030292-19030311 | Msa0061050:intron | 35.0% | |
| ACATCATCCGTATTATGCAA+TGG | - | chr1_2:19030302-19030321 | None:intergenic | 35.0% | |
| ! | GCATAATACGGATGATGTTT+TGG | + | chr1_2:19030304-19030323 | Msa0061050:intron | 35.0% |
| GCCTTCTTAGATTCATTAAC+TGG | - | chr1_2:19030811-19030830 | None:intergenic | 35.0% | |
| !! | CATATCCTTTTAGCTAACCT+TGG | - | chr1_2:19030901-19030920 | None:intergenic | 35.0% |
| CTAAAAGGATATGAACCACA+AGG | + | chr1_2:19030908-19030927 | Msa0061050:intron | 35.0% | |
| CAAAAAAACCTATACCCTTG+TGG | - | chr1_2:19030926-19030945 | None:intergenic | 35.0% | |
| TTCTTGTAAACTGGCTAAAG+AGG | - | chr1_2:19031123-19031142 | None:intergenic | 35.0% | |
| ! | TTGAGTGTGATTTTTGCTAG+TGG | + | chr1_2:19031374-19031393 | Msa0061050:intron | 35.0% |
| CTTCTTTAGCAACACTTACA+TGG | + | chr1_2:19031422-19031441 | Msa0061050:intron | 35.0% | |
| ! | TATGGGACTTGAGAATTTTG+CGG | - | chr1_2:19031674-19031693 | None:intergenic | 35.0% |
| AGTGTAACTTCTACGTTGAT+CGG | - | chr1_2:19031777-19031796 | None:intergenic | 35.0% | |
| TTGATCTGTTCTACAAGTCT+TGG | - | chr1_2:19031813-19031832 | None:intergenic | 35.0% | |
| ! | TTCATTCTCTTTAGAAGCAC+AGG | + | chr1_2:19031836-19031855 | Msa0061050:CDS | 35.0% |
| TTCCACAGGAGCTATTATTT+CGG | + | chr1_2:19031908-19031927 | Msa0061050:CDS | 35.0% | |
| ATTGAAGAAGGTAGTGAAAG+AGG | + | chr1_2:19031960-19031979 | Msa0061050:CDS | 35.0% | |
| GAACAATTCTTCTTAAGGCT+GGG | - | chr1_2:19032067-19032086 | None:intergenic | 35.0% | |
| AGAACAATTCTTCTTAAGGC+TGG | - | chr1_2:19032068-19032087 | None:intergenic | 35.0% | |
| TGTTTAAAGATTCCTTCCCA+TGG | - | chr1_2:19032154-19032173 | None:intergenic | 35.0% | |
| ! | CCTTTTACAAATAAGGACCA+AGG | - | chr1_2:19032224-19032243 | None:intergenic | 35.0% |
| ! | CCTTGGTCCTTATTTGTAAA+AGG | + | chr1_2:19032221-19032240 | Msa0061050:three_prime_UTR | 35.0% |
| !! | TGATTCTACTAGTGGATTCT+TGG | + | chr1_2:19032249-19032268 | Msa0061050:three_prime_UTR | 35.0% |
| AAGTAGACTTTGTCCTCAAA+TGG | - | chr1_2:19032295-19032314 | None:intergenic | 35.0% | |
| ATTTGAGGACAAAGTCTACT+TGG | + | chr1_2:19032294-19032313 | Msa0061050:three_prime_UTR | 35.0% | |
| TTTGAGGACAAAGTCTACTT+GGG | + | chr1_2:19032295-19032314 | Msa0061050:three_prime_UTR | 35.0% | |
| AGCAAGTTACATCTTTGTAC+CGG | + | chr1_2:19032436-19032455 | Msa0061050:three_prime_UTR | 35.0% | |
| !!! | CTATCTTGTTTTCCGACGAA+GGG | + | chr1_2:19026274-19026293 | Msa0061050:five_prime_UTR | 40.0% |
| !! | ATGAGAAGTGTTAAGGTTGG+AGG | - | chr1_2:19026395-19026414 | None:intergenic | 40.0% |
| ACTCGTAGTTGCAGCAATAA+CGG | + | chr1_2:19026514-19026533 | Msa0061050:CDS | 40.0% | |
| GTTGAGATTAAAACTCACGG+GGG | - | chr1_2:19026569-19026588 | None:intergenic | 40.0% | |
| GGTTGAGATTAAAACTCACG+GGG | - | chr1_2:19026570-19026589 | None:intergenic | 40.0% | |
| GGGTTGAGATTAAAACTCAC+GGG | - | chr1_2:19026571-19026590 | None:intergenic | 40.0% | |
| CTGGATTCAGTCCTAATGTA+TGG | + | chr1_2:19026839-19026858 | Msa0061050:intron | 40.0% | |
| !! | TATGGTATGCTCGCTGTTTT+AGG | + | chr1_2:19026857-19026876 | Msa0061050:intron | 40.0% |
| !! | ATGGTATGCTCGCTGTTTTA+GGG | + | chr1_2:19026858-19026877 | Msa0061050:intron | 40.0% |
| GGTATTGTGAACAAACAGCA+CGG | + | chr1_2:19027146-19027165 | Msa0061050:intron | 40.0% | |
| GACTTGAGTTTAGGCAACTA+TGG | + | chr1_2:19027168-19027187 | Msa0061050:intron | 40.0% | |
| GTTTAGGCAACTATGGAGAT+AGG | + | chr1_2:19027175-19027194 | Msa0061050:intron | 40.0% | |
| AACACAGACAAACCACAAAG+AGG | - | chr1_2:19027213-19027232 | None:intergenic | 40.0% | |
| GGTGAATCATCTTCTGACTT+TGG | + | chr1_2:19027304-19027323 | Msa0061050:CDS | 40.0% | |
| CTTTGGCAATATTCACTTGG+TGG | + | chr1_2:19027406-19027425 | Msa0061050:CDS | 40.0% | |
| !! | AACTAGATTCTGCTCTAAGG+AGG | - | chr1_2:19027489-19027508 | None:intergenic | 40.0% |
| CCTTAGAGCAGAATCTAGTT+CGG | + | chr1_2:19027489-19027508 | Msa0061050:CDS | 40.0% | |
| AGGAATTCTGTAGCAGATAG+TGG | + | chr1_2:19027565-19027584 | Msa0061050:CDS | 40.0% | |
| ATTGCTGACACAATCTTCCT+TGG | + | chr1_2:19027609-19027628 | Msa0061050:CDS | 40.0% | |
| CCATGATGTCATGGTTAACA+TGG | - | chr1_2:19027899-19027918 | None:intergenic | 40.0% | |
| CCATGTTAACCATGACATCA+TGG | + | chr1_2:19027896-19027915 | Msa0061050:CDS | 40.0% | |
| !! | TCCCGAGAGCATAATGTTTT+AGG | - | chr1_2:19028082-19028101 | None:intergenic | 40.0% |
| ! | ATGGTAGTGCTTTGACTTTG+AGG | + | chr1_2:19028367-19028386 | Msa0061050:intron | 40.0% |
| !! | ATGGTTCTAATTAGGGAAGG+AGG | + | chr1_2:19028405-19028424 | Msa0061050:intron | 40.0% |
| ! | ATGTATGCTTTGAATGGAGG+GGG | + | chr1_2:19028633-19028652 | Msa0061050:intron | 40.0% |
| GATTAATACTGAAGCCTTCC+TGG | + | chr1_2:19028690-19028709 | Msa0061050:intron | 40.0% | |
| AACTAGAACCTTTGTTGACC+AGG | - | chr1_2:19028711-19028730 | None:intergenic | 40.0% | |
| ! | GTGCCTTCTGATAAGTTGAA+TGG | + | chr1_2:19028908-19028927 | Msa0061050:intron | 40.0% |
| TTAGATGCTTCGGAGTCATA+TGG | - | chr1_2:19029107-19029126 | None:intergenic | 40.0% | |
| TGCATTGCTAGAACTTGTGA+AGG | + | chr1_2:19029151-19029170 | Msa0061050:CDS | 40.0% | |
| ! | ACGTGGGTTGTATGACTTAT+AGG | - | chr1_2:19029243-19029262 | None:intergenic | 40.0% |
| ATACAACCCACGTTTATACG+AGG | + | chr1_2:19029250-19029269 | Msa0061050:CDS | 40.0% | |
| TCTGATGCGCCAAATTTAGA+AGG | - | chr1_2:19029323-19029342 | None:intergenic | 40.0% | |
| CAACAATTCCTTGTTCGTGT+TGG | + | chr1_2:19029422-19029441 | Msa0061050:CDS | 40.0% | |
| !! | TCGTGTTGGTGCTATTGAAA+TGG | + | chr1_2:19029436-19029455 | Msa0061050:CDS | 40.0% |
| TATGCGTATTGCATTCAAGG+AGG | + | chr1_2:19029622-19029641 | Msa0061050:CDS | 40.0% | |
| GTGCAGTTAGGCATTTAGTA+CGG | + | chr1_2:19029648-19029667 | Msa0061050:CDS | 40.0% | |
| ATCCGATCGATAACCATTCT+AGG | + | chr1_2:19030035-19030054 | Msa0061050:intron | 40.0% | |
| TCCGATCGATAACCATTCTA+GGG | + | chr1_2:19030036-19030055 | Msa0061050:intron | 40.0% | |
| ACCCTAGAATGGTTATCGAT+CGG | - | chr1_2:19030040-19030059 | None:intergenic | 40.0% | |
| !! | CGATAACCATTCTAGGGTTA+AGG | + | chr1_2:19030042-19030061 | Msa0061050:intron | 40.0% |
| CATCCGTATTATGCAATGGT+TGG | - | chr1_2:19030298-19030317 | None:intergenic | 40.0% | |
| !! | GAATCTAAGAAGGCATTTGG+TGG | + | chr1_2:19030817-19030836 | Msa0061050:CDS | 40.0% |
| !! | CCTTGGGTTTGTTTTCGATA+CGG | - | chr1_2:19030884-19030903 | None:intergenic | 40.0% |
| ! | CAAACCCAAGGTTAGCTAAA+AGG | + | chr1_2:19030893-19030912 | Msa0061050:intron | 40.0% |
| ! | GATATGAACCACAAGGGTAT+AGG | + | chr1_2:19030915-19030934 | Msa0061050:intron | 40.0% |
| AGGACTTCAAAATCTCCACA+AGG | - | chr1_2:19031103-19031122 | None:intergenic | 40.0% | |
| !! | TGCGGCTTTTTCTTGTAAAC+TGG | - | chr1_2:19031132-19031151 | None:intergenic | 40.0% |
| CACAAACTCAAGAACAGATG+CGG | - | chr1_2:19031150-19031169 | None:intergenic | 40.0% | |
| GAAATAATCGGACTCAGTGT+TGG | - | chr1_2:19031185-19031204 | None:intergenic | 40.0% | |
| !! | ACTGAGTCCGATTATTTCTG+TGG | + | chr1_2:19031187-19031206 | Msa0061050:CDS | 40.0% |
| ! | CTCTTTAGAAGCACAGGAAA+AGG | + | chr1_2:19031842-19031861 | Msa0061050:CDS | 40.0% |
| TAGAATAGTATCTGAAGGGG+TGG | + | chr1_2:19031881-19031900 | Msa0061050:CDS | 40.0% | |
| TTCCGAAATAATAGCTCCTG+TGG | - | chr1_2:19031913-19031932 | None:intergenic | 40.0% | |
| ACAGGAGCTATTATTTCGGA+AGG | + | chr1_2:19031912-19031931 | Msa0061050:CDS | 40.0% | |
| CAGGAGCTATTATTTCGGAA+GGG | + | chr1_2:19031913-19031932 | Msa0061050:CDS | 40.0% | |
| AGGAGCTATTATTTCGGAAG+GGG | + | chr1_2:19031914-19031933 | Msa0061050:CDS | 40.0% | |
| TTGGTGAAGCTGATTGAAGA+AGG | + | chr1_2:19031948-19031967 | Msa0061050:CDS | 40.0% | |
| TTCTGTCAGAAAAACCACAG+TGG | + | chr1_2:19032084-19032103 | Msa0061050:CDS | 40.0% | |
| AGAAAAACCACAGTGGCAAA+GGG | + | chr1_2:19032091-19032110 | Msa0061050:CDS | 40.0% | |
| ACTTCATTTGCTCAGGAGTT+TGG | + | chr1_2:19032115-19032134 | Msa0061050:CDS | 40.0% | |
| CCTTCGTCGGAAAACAAGAT+AGG | - | chr1_2:19026276-19026295 | None:intergenic | 45.0% | |
| !!! | CCTATCTTGTTTTCCGACGA+AGG | + | chr1_2:19026273-19026292 | Msa0061050:five_prime_UTR | 45.0% |
| !! | AGGAAGAGGGTGTTAGGATT+GGG | - | chr1_2:19026375-19026394 | None:intergenic | 45.0% |
| GTGTTAAGGTTGGAGGAAGA+GGG | - | chr1_2:19026388-19026407 | None:intergenic | 45.0% | |
| AGTGTTAAGGTTGGAGGAAG+AGG | - | chr1_2:19026389-19026408 | None:intergenic | 45.0% | |
| !! | GCGCGAAATGAGAAGTGTTA+AGG | - | chr1_2:19026402-19026421 | None:intergenic | 45.0% |
| CAGCGAGCATACCATACATT+AGG | - | chr1_2:19026853-19026872 | None:intergenic | 45.0% | |
| AACAGCACGGACTTGAGTTT+AGG | + | chr1_2:19027159-19027178 | Msa0061050:intron | 45.0% | |
| ! | TGACTTTGGTGATAGCTACG+TGG | + | chr1_2:19027318-19027337 | Msa0061050:CDS | 45.0% |
| !! | GCCTTGTTTGTTCGTATGCT+AGG | + | chr1_2:19027340-19027359 | Msa0061050:CDS | 45.0% |
| GCCTAGCATACGAACAAACA+AGG | - | chr1_2:19027344-19027363 | None:intergenic | 45.0% | |
| CCGAACTAGATTCTGCTCTA+AGG | - | chr1_2:19027492-19027511 | None:intergenic | 45.0% | |
| ! | AGAATCTAGTTCGGCTTGTG+AGG | + | chr1_2:19027498-19027517 | Msa0061050:CDS | 45.0% |
| ACAATCTTCCTTGGCTTCTG+AGG | + | chr1_2:19027618-19027637 | Msa0061050:CDS | 45.0% | |
| !! | TTCCTTGGCTTCTGAGGTAT+AGG | + | chr1_2:19027624-19027643 | Msa0061050:intron | 45.0% |
| TTCCTATACCTCAGAAGCCA+AGG | - | chr1_2:19027629-19027648 | None:intergenic | 45.0% | |
| CTGCTTCAACCATGATGTCA+TGG | - | chr1_2:19027908-19027927 | None:intergenic | 45.0% | |
| CATGACATCATGGTTGAAGC+AGG | + | chr1_2:19027906-19027925 | Msa0061050:CDS | 45.0% | |
| CATAAGCAGGCCACTATAGA+AGG | - | chr1_2:19028201-19028220 | None:intergenic | 45.0% | |
| TTCCTGCTCAAGAGTTGTGT+TGG | + | chr1_2:19028236-19028255 | Msa0061050:intron | 45.0% | |
| AACCAACACAACTCTTGAGC+AGG | - | chr1_2:19028241-19028260 | None:intergenic | 45.0% | |
| ! | GCTAATTTTGTGCAAGGACG+TGG | + | chr1_2:19028444-19028463 | Msa0061050:intron | 45.0% |
| AGAACCTTTGTTGACCAGGA+AGG | - | chr1_2:19028707-19028726 | None:intergenic | 45.0% | |
| GTTGAGATTTAGGGATCGGA+TGG | - | chr1_2:19028872-19028891 | None:intergenic | 45.0% | |
| GCATCAAGAGAAAGGACCTT+TGG | - | chr1_2:19029030-19029049 | None:intergenic | 45.0% | |
| TAGGCTGCAGCACCTATTAA+TGG | - | chr1_2:19029224-19029243 | None:intergenic | 45.0% | |
| TAGGTGCCTCGTATAAACGT+GGG | - | chr1_2:19029259-19029278 | None:intergenic | 45.0% | |
| TCTGTGCCATCTGGAAATGT+AGG | - | chr1_2:19029278-19029297 | None:intergenic | 45.0% | |
| CTTTCGATTTCTGTGCCATC+TGG | - | chr1_2:19029287-19029306 | None:intergenic | 45.0% | |
| CAGATGGCACAGAAATCGAA+AGG | + | chr1_2:19029285-19029304 | Msa0061050:CDS | 45.0% | |
| !! | GGCGCATCAGAAGTACTTAT+TGG | + | chr1_2:19029332-19029351 | Msa0061050:CDS | 45.0% |
| CAATAGCACCAACACGAACA+AGG | - | chr1_2:19029433-19029452 | None:intergenic | 45.0% | |
| ACACTCTTGCATTGGATCGA+CGG | + | chr1_2:19029506-19029525 | Msa0061050:CDS | 45.0% | |
| ! | CAATGATAATGCAGTCCAGC+TGG | + | chr1_2:19029682-19029701 | Msa0061050:CDS | 45.0% |
| ! | CTTTGGAAAAGCTGTCTGCT+AGG | + | chr1_2:19029717-19029736 | Msa0061050:CDS | 45.0% |
| CAGTTGACAGGGAGAAAAGA+TGG | + | chr1_2:19029940-19029959 | Msa0061050:intron | 45.0% | |
| ATGGTGAAAGGTAGACCCTA+TGG | + | chr1_2:19030208-19030227 | Msa0061050:intron | 45.0% | |
| !! | AATAGGGATGGCTTTGACAG+TGG | + | chr1_2:19030334-19030353 | Msa0061050:intron | 45.0% |
| !! | ATAGGGATGGCTTTGACAGT+GGG | + | chr1_2:19030335-19030354 | Msa0061050:intron | 45.0% |
| TAAAGGAGCTAAACCACCCT+CGG | - | chr1_2:19030489-19030508 | None:intergenic | 45.0% | |
| TTAAAACGCTCAGACGTAGC+TGG | + | chr1_2:19030518-19030537 | Msa0061050:CDS | 45.0% | |
| !! | TGTTTTCGATACGGCTTGCT+CGG | - | chr1_2:19030875-19030894 | None:intergenic | 45.0% |
| CCGTATCGAAAACAAACCCA+AGG | + | chr1_2:19030881-19030900 | Msa0061050:CDS | 45.0% | |
| CGCATCTGTTCTTGAGTTTG+TGG | + | chr1_2:19031148-19031167 | Msa0061050:CDS | 45.0% | |
| GCTATTGAACTTGAAGAGGC+CGG | + | chr1_2:19031552-19031571 | Msa0061050:CDS | 45.0% | |
| TGCTGCAGATATTGCAAGAC+CGG | - | chr1_2:19031574-19031593 | None:intergenic | 45.0% | |
| TTGCAATATCTGCAGCATCG+CGG | + | chr1_2:19031577-19031596 | Msa0061050:CDS | 45.0% | |
| AGCGTGTCAATGAAATGGGA+GGG | - | chr1_2:19031651-19031670 | None:intergenic | 45.0% | |
| ! | ATTCAGCACTTCTAGCTGCT+GGG | + | chr1_2:19032036-19032055 | Msa0061050:CDS | 45.0% |
| CAGAAAAACCACAGTGGCAA+AGG | + | chr1_2:19032090-19032109 | Msa0061050:CDS | 45.0% | |
| !! | AAAGGGCACTTCATTTGCTC+AGG | + | chr1_2:19032108-19032127 | Msa0061050:CDS | 45.0% |
| TTGGAAACATGACGAGTCCA+TGG | + | chr1_2:19032134-19032153 | Msa0061050:exon | 45.0% | |
| TGGAAACATGACGAGTCCAT+GGG | + | chr1_2:19032135-19032154 | Msa0061050:exon | 45.0% | |
| !!! | TCTCAGTTTTGGGCCATTTG+AGG | + | chr1_2:19032279-19032298 | Msa0061050:three_prime_UTR | 45.0% |
| ! | TTGTTTTCCGACGAAGGGTC+TGG | + | chr1_2:19026279-19026298 | Msa0061050:five_prime_UTR | 50.0% |
| !! | GAGGAAGAGGGTGTTAGGAT+TGG | - | chr1_2:19026376-19026395 | None:intergenic | 50.0% |
| ! | GGGTGATTTGGAAGAGTACG+AGG | - | chr1_2:19026467-19026486 | None:intergenic | 50.0% |
| AGGGAGTTTGGAGGGTGATT+TGG | - | chr1_2:19026479-19026498 | None:intergenic | 50.0% | |
| GCAAAGAGAGGGAGTTTGGA+GGG | - | chr1_2:19026487-19026506 | None:intergenic | 50.0% | |
| GAGTGAACCTGGCAAAGAGA+GGG | - | chr1_2:19026498-19026517 | None:intergenic | 50.0% | |
| ATTAAAACTCACGGGGGAGG+CGG | - | chr1_2:19026563-19026582 | None:intergenic | 50.0% | |
| GAGATTAAAACTCACGGGGG+AGG | - | chr1_2:19026566-19026585 | None:intergenic | 50.0% | |
| !!! | TCGCTGTTTTAGGGCCTGTT+TGG | + | chr1_2:19026867-19026886 | Msa0061050:intron | 50.0% |
| ATCTTCACTCGCTTCGTGAG+TGG | + | chr1_2:19027098-19027117 | Msa0061050:intron | 50.0% | |
| GAAAGTGAAGGAAGCTGCAG+CGG | + | chr1_2:19027848-19027867 | Msa0061050:CDS | 50.0% | |
| AAAGTGAAGGAAGCTGCAGC+GGG | + | chr1_2:19027849-19027868 | Msa0061050:CDS | 50.0% | |
| AAGTTCCTACAGAGCAGGAG+AGG | - | chr1_2:19028142-19028161 | None:intergenic | 50.0% | |
| TCTCCTGCTCTGTAGGAACT+TGG | + | chr1_2:19028141-19028160 | Msa0061050:intron | 50.0% | |
| GAAGCCTTCCTGGTCAACAA+AGG | + | chr1_2:19028700-19028719 | Msa0061050:intron | 50.0% | |
| GCAGCACCTATTAATGGCAC+AGG | - | chr1_2:19029218-19029237 | None:intergenic | 50.0% | |
| GTAGGTGCCTCGTATAAACG+TGG | - | chr1_2:19029260-19029279 | None:intergenic | 50.0% | |
| ! | GAGGCACCTACATTTCCAGA+TGG | + | chr1_2:19029269-19029288 | Msa0061050:CDS | 50.0% |
| !! | CAATGCAAGAGTGTCAGACG+CGG | - | chr1_2:19029500-19029519 | None:intergenic | 50.0% |
| CGTATTGCATTCAAGGAGGC+TGG | + | chr1_2:19029626-19029645 | Msa0061050:CDS | 50.0% | |
| TTGCCGAGTGATTGAAACCG+AGG | + | chr1_2:19030469-19030488 | Msa0061050:CDS | 50.0% | |
| TGCCGAGTGATTGAAACCGA+GGG | + | chr1_2:19030470-19030489 | Msa0061050:CDS | 50.0% | |
| CACCCTCGGTTTCAATCACT+CGG | - | chr1_2:19030475-19030494 | None:intergenic | 50.0% | |
| AGACGTAGCTGGAGCTATTG+CGG | + | chr1_2:19030529-19030548 | Msa0061050:CDS | 50.0% | |
| AGCTGGAGCTATTGCGGAAA+AGG | + | chr1_2:19030535-19030554 | Msa0061050:CDS | 50.0% | |
| !! | TGGAGCCGATGATGGATCAA+AGG | + | chr1_2:19030837-19030856 | Msa0061050:CDS | 50.0% |
| ! | AGTTTTCACTGCACGCCTTG+TGG | + | chr1_2:19031085-19031104 | Msa0061050:CDS | 50.0% |
| AGCAGAGACAGAATCTGACG+TGG | + | chr1_2:19031506-19031525 | Msa0061050:intron | 50.0% | |
| GAGCGTGTCAATGAAATGGG+AGG | - | chr1_2:19031652-19031671 | None:intergenic | 50.0% | |
| GCGGAGCGTGTCAATGAAAT+GGG | - | chr1_2:19031655-19031674 | None:intergenic | 50.0% | |
| TGCGGAGCGTGTCAATGAAA+TGG | - | chr1_2:19031656-19031675 | None:intergenic | 50.0% | |
| TTTGCTGCGGAGGGGAATAT+GGG | - | chr1_2:19031691-19031710 | None:intergenic | 50.0% | |
| TACCCAATCTTTGCTGCGGA+GGG | - | chr1_2:19031700-19031719 | None:intergenic | 50.0% | |
| CAGCTACCCAATCTTTGCTG+CGG | - | chr1_2:19031704-19031723 | None:intergenic | 50.0% | |
| GGAAGGGGCTGTGTATTCTT+TGG | + | chr1_2:19031929-19031948 | Msa0061050:CDS | 50.0% | |
| !! | CAGCAGCTAGAAGTGCTGAA+TGG | - | chr1_2:19032037-19032056 | None:intergenic | 50.0% |
| ! | CATTCAGCACTTCTAGCTGC+TGG | + | chr1_2:19032035-19032054 | Msa0061050:CDS | 50.0% |
| ! | TTCAGCACTTCTAGCTGCTG+GGG | + | chr1_2:19032037-19032056 | Msa0061050:CDS | 50.0% |
| AACATGACGAGTCCATGGGA+AGG | + | chr1_2:19032139-19032158 | Msa0061050:exon | 50.0% | |
| ! | TCTTTGTACCGGTGAGTCGA+TGG | + | chr1_2:19032447-19032466 | Msa0061050:three_prime_UTR | 50.0% |
| TCCAGTTCCAGACCCTTCGT+CGG | - | chr1_2:19026289-19026308 | None:intergenic | 55.0% | |
| !! | GGTTGGAGGAAGAGGGTGTT+AGG | - | chr1_2:19026381-19026400 | None:intergenic | 55.0% |
| CGAGGAAGAGAGAGTGACTC+TGG | - | chr1_2:19026449-19026468 | None:intergenic | 55.0% | |
| GGCAAAGAGAGGGAGTTTGG+AGG | - | chr1_2:19026488-19026507 | None:intergenic | 55.0% | |
| CCTGGCAAAGAGAGGGAGTT+TGG | - | chr1_2:19026491-19026510 | None:intergenic | 55.0% | |
| CCAAACTCCCTCTCTTTGCC+AGG | + | chr1_2:19026488-19026507 | Msa0061050:CDS | 55.0% | |
| CGAGTGAACCTGGCAAAGAG+AGG | - | chr1_2:19026499-19026518 | None:intergenic | 55.0% | |
| GCTGCAACTACGAGTGAACC+TGG | - | chr1_2:19026509-19026528 | None:intergenic | 55.0% | |
| GGTCATTCTGATCACTCCGC+TGG | + | chr1_2:19026535-19026554 | Msa0061050:CDS | 55.0% | |
| TTAAAACTCACGGGGGAGGC+GGG | - | chr1_2:19026562-19026581 | None:intergenic | 55.0% | |
| ! | GGAAGCTGCAGCGGGTATTT+TGG | + | chr1_2:19027857-19027876 | Msa0061050:CDS | 55.0% |
| TACAGAGCAGGAGAGGATCC+AGG | - | chr1_2:19028135-19028154 | None:intergenic | 55.0% | |
| TGGATCCTCTCCTGCTCTGT+AGG | + | chr1_2:19028134-19028153 | Msa0061050:intron | 55.0% | |
| CTGCCAAGTTCCTACAGAGC+AGG | - | chr1_2:19028147-19028166 | None:intergenic | 55.0% | |
| CGCGTCTGACACTCTTGCAT+TGG | + | chr1_2:19029498-19029517 | Msa0061050:CDS | 55.0% | |
| TCAAGGAGGCTGGTGCAGTT+AGG | + | chr1_2:19029636-19029655 | Msa0061050:CDS | 55.0% | |
| CGAGTGATTGAAACCGAGGG+TGG | + | chr1_2:19030473-19030492 | Msa0061050:CDS | 55.0% | |
| ! | GCATTTGGTGGAGCCGATGA+TGG | + | chr1_2:19030829-19030848 | Msa0061050:CDS | 55.0% |
| CTTTGCTGCGGAGGGGAATA+TGG | - | chr1_2:19031692-19031711 | None:intergenic | 55.0% | |
| TTCCCCTCCGCAGCAAAGAT+TGG | + | chr1_2:19031694-19031713 | Msa0061050:CDS | 55.0% | |
| TCCCCTCCGCAGCAAAGATT+GGG | + | chr1_2:19031695-19031714 | Msa0061050:CDS | 55.0% | |
| ACCCAATCTTTGCTGCGGAG+GGG | - | chr1_2:19031699-19031718 | None:intergenic | 55.0% | |
| CTACCCAATCTTTGCTGCGG+AGG | - | chr1_2:19031701-19031720 | None:intergenic | 55.0% | |
| GAAGGGGTGGTAGATTCCAC+AGG | + | chr1_2:19031894-19031913 | Msa0061050:CDS | 55.0% | |
| ! | TGAAGTGCCCTTTGCCACTG+TGG | - | chr1_2:19032101-19032120 | None:intergenic | 55.0% |
| !! | ACAACCAGCCATCGACTCAC+CGG | - | chr1_2:19032458-19032477 | None:intergenic | 55.0% |
| ! | TCCGACGAAGGGTCTGGAAC+TGG | + | chr1_2:19026285-19026304 | Msa0061050:five_prime_UTR | 60.0% |
| ! | TGTACCGGTGAGTCGATGGC+TGG | + | chr1_2:19032451-19032470 | Msa0061050:three_prime_UTR | 60.0% |
| ! | TCGGCTTGTGAGGCAGCTGC+AGG | + | chr1_2:19027508-19027527 | Msa0061050:CDS | 65.0% |
| AAGCTTGCGTCGCTGCCAGC+TGG | - | chr1_2:19029700-19029719 | None:intergenic | 65.0% | |
| GCTGGCAGCGACGCAAGCTT+TGG | + | chr1_2:19029700-19029719 | Msa0061050:CDS | 65.0% | |
| ! | CACGGGGGAGGCGGGACCAG+CGG | - | chr1_2:19026554-19026573 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 19026259 | 19032480 | 19026259 | ID=Msa0061050;Name=Msa0061050 |
| chr1_2 | mRNA | 19026259 | 19032480 | 19026259 | ID=Msa0061050-mRNA-1;Parent=Msa0061050;Name=Msa0061050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=93|1|1|1|1|1|9|335|842 |
| chr1_2 | exon | 19026259 | 19026570 | 19026259 | ID=Msa0061050-mRNA-1:exon:7336;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19027286 | 19027639 | 19027286 | ID=Msa0061050-mRNA-1:exon:7337;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19027729 | 19027944 | 19027729 | ID=Msa0061050-mRNA-1:exon:7338;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19029092 | 19029738 | 19029092 | ID=Msa0061050-mRNA-1:exon:7339;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19030460 | 19030556 | 19030460 | ID=Msa0061050-mRNA-1:exon:7340;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19030662 | 19030715 | 19030662 | ID=Msa0061050-mRNA-1:exon:7341;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19030796 | 19030902 | 19030796 | ID=Msa0061050-mRNA-1:exon:7342;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19031067 | 19031263 | 19031067 | ID=Msa0061050-mRNA-1:exon:7343;Parent=Msa0061050-mRNA-1 |
| chr1_2 | exon | 19031508 | 19032480 | 19031508 | ID=Msa0061050-mRNA-1:exon:7344;Parent=Msa0061050-mRNA-1 |
| chr1_2 | five_prime_UTR | 19026259 | 19026351 | 19026259 | ID=Msa0061050-mRNA-1:five_prime_utr;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19026352 | 19026570 | 19026352 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19027286 | 19027639 | 19027286 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19027729 | 19027944 | 19027729 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19029092 | 19029738 | 19029092 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19030460 | 19030556 | 19030460 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19030662 | 19030715 | 19030662 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19030796 | 19030902 | 19030796 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19031067 | 19031263 | 19031067 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | CDS | 19031508 | 19032145 | 19031508 | ID=Msa0061050-mRNA-1:cds;Parent=Msa0061050-mRNA-1 |
| chr1_2 | three_prime_UTR | 19032146 | 19032480 | 19032146 | ID=Msa0061050-mRNA-1:three_prime_utr;Parent=Msa0061050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
