AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0785670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785670 MtrunA17_Chr5g0435631 95.652 483 14 1 1 483 1 476 0.0 958
Msa0785670 MtrunA17_Chr4g0009431 80.992 484 82 3 1 482 1 476 0.0 820
Msa0785670 MtrunA17_Chr3g0112121 87.162 444 48 3 1 443 1 436 0.0 801
Msa0785670 MtrunA17_Chr2g0334101 48.555 346 164 9 89 426 75 414 8.46e-108 326
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785670 AT2G39730.1 79.089 483 91 3 1 482 1 474 0.0 796
Msa0785670 AT2G39730.2 78.271 451 88 3 1 450 1 442 0.0 732
Msa0785670 AT2G39730.3 78.971 447 84 3 1 446 1 438 0.0 731
Msa0785670 AT1G73110.2 55.593 295 122 7 139 426 39 331 1.28e-111 333
Msa0785670 AT1G73110.1 51.190 336 150 9 98 426 100 428 1.08e-110 335

Find 116 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTCTCATTCTTGGTATC+TGG 0.135434 5_2:+70783280 Msa0785670:CDS
CTTCAGGTTCCTCTCATTCT+TGG 0.219340 5_2:+70783273 Msa0785670:intron
CTAAGCATTCATTAGGTTAA+AGG 0.223567 5_2:+70786180 Msa0785670:three_prime_UTR
TAGAGAAATGTGTATTGTTT+TGG 0.228371 5_2:-70781600 None:intergenic
TTATCATCTTGTTAAAATAT+TGG 0.242167 5_2:+70786240 Msa0785670:three_prime_UTR
TCAATTGGCAGACAAGTATT+TGG 0.252747 5_2:+70784929 Msa0785670:CDS
AAATTACATGCCTTGATATT+AGG 0.286542 5_2:-70782992 None:intergenic
GTTCCAAGTTCATCATTCTT+TGG 0.302261 5_2:+70782351 Msa0785670:CDS
AAAAGTTGGAGGTCCTTCTT+TGG 0.306483 5_2:-70784826 None:intergenic
CCAGATGAAACCTTTGTGTT+TGG 0.318881 5_2:-70782405 None:intergenic
CCAATACGATCTTCTCTTGT+AGG 0.327862 5_2:-70784393 None:intergenic
CCAACAAATGTTCAACTTCC+TGG 0.344096 5_2:+70784255 Msa0785670:CDS
TCCTCTCATTCTTGGTATCT+GGG 0.346937 5_2:+70783281 Msa0785670:CDS
ATCAAGAGTGGATCTTACTA+TGG 0.352058 5_2:+70784987 Msa0785670:CDS
TCTCCAGCACTCATCATGAT+AGG 0.354239 5_2:-70784030 None:intergenic
GATGACTTTGGAGAAACTAT+TGG 0.366126 5_2:+70784860 Msa0785670:CDS
GAATAATCTAAGCATTCATT+AGG 0.369022 5_2:+70786173 Msa0785670:exon
TTTGGATCTGTACATCCTTC+AGG 0.374344 5_2:-70786092 None:intergenic
TAAGTGTTGCATTTACCATT+TGG 0.386480 5_2:-70784215 None:intergenic
CCAAACACAAAGGTTTCATC+TGG 0.389569 5_2:+70782405 Msa0785670:CDS
AGCAAACTGACAAAGATAGA+TGG 0.392016 5_2:+70782466 Msa0785670:CDS
ATCGTATTGGTGTTTGTAAA+GGG 0.395706 5_2:+70784406 Msa0785670:CDS
CAAAGATAGATGGGGAGGTT+TGG 0.396410 5_2:+70782476 Msa0785670:CDS
TTGGAGAAACTATTGGAGTA+TGG 0.399881 5_2:+70784867 Msa0785670:CDS
CCAGGAAGTTGAACATTTGT+TGG 0.402105 5_2:-70784255 None:intergenic
CGTGTGCCTATCATTGTTAC+TGG 0.412562 5_2:+70784303 Msa0785670:CDS
CAGATTTCTTTGGTGCACTT+AGG 0.414256 5_2:+70784724 Msa0785670:intron
AGATTTCTTTGGTGCACTTA+GGG 0.414272 5_2:+70784725 Msa0785670:intron
AGGCAGAGTCAAGAAGTTCT+TGG 0.414493 5_2:-70782972 None:intergenic
TTGATCATCTGAAGTATCAT+AGG 0.417286 5_2:-70782499 None:intergenic
AACTTACTTGATGCCCATCT+TGG 0.418642 5_2:-70783349 None:intergenic
CCATCATCACTTCTAGCAGT+TGG 0.419425 5_2:-70786131 None:intergenic
TGATCAACCCAAGATGACTT+TGG 0.420505 5_2:+70784848 Msa0785670:CDS
AAATGTGAAGAGAGTTCAAT+TGG 0.422067 5_2:+70784914 Msa0785670:CDS
TACTATAAATTCATTCCCTC+TGG 0.427896 5_2:+70781562 Msa0785670:five_prime_UTR
CAGTTGAGCTTGAATAGCTC+TGG 0.429062 5_2:+70782315 Msa0785670:CDS
ATACGACCGTCACGAATAAG+AGG 0.436360 5_2:-70784351 None:intergenic
GATCGTATTGGTGTTTGTAA+AGG 0.436492 5_2:+70784405 Msa0785670:CDS
TAGTTTCTCCAAAGTCATCT+TGG 0.437109 5_2:-70784856 None:intergenic
AGTTTCTCCAAAGTCATCTT+GGG 0.442473 5_2:-70784855 None:intergenic
TCTGTACATCCTTCAGGAAC+AGG 0.444171 5_2:-70786086 None:intergenic
TCATTACCAGTAACAATGAT+AGG 0.445482 5_2:-70784309 None:intergenic
TCTTATTCGTGACGGTCGTA+TGG 0.446674 5_2:+70784353 Msa0785670:CDS
CTTTGTCGAATTAGTTTCGC+TGG 0.446692 5_2:-70784078 None:intergenic
CAGGAAGTTGAACATTTGTT+GGG 0.448889 5_2:-70784254 None:intergenic
TTCCAGCATCTTGTGGTGCT+TGG 0.450580 5_2:-70782563 None:intergenic
CTTCCAAAGAATGATGAACT+TGG 0.453642 5_2:-70782354 None:intergenic
CATCATCACTTCTAGCAGTT+GGG 0.458963 5_2:-70786130 None:intergenic
TGATGCAGGAGCCGGTCGTA+TGG 0.459178 5_2:+70784164 Msa0785670:CDS
GAGCTAGAAAGTGGAAATGC+AGG 0.469912 5_2:+70784051 Msa0785670:CDS
TGAGCTTGTCTTTGCCAAGA+TGG 0.475008 5_2:+70783335 Msa0785670:CDS
GAAGTGAGAAAGTGGATTGC+TGG 0.475410 5_2:+70784765 Msa0785670:CDS
AACGATCTTGATGCAGGAGC+CGG 0.476723 5_2:+70784156 Msa0785670:CDS
TTCATAAACGATCTTGATGC+AGG 0.477723 5_2:+70784150 Msa0785670:CDS
CTTGGTATCTGGGGAGGTAA+AGG 0.479768 5_2:+70783291 Msa0785670:CDS
TTCCAAGCACCACAAGATGC+TGG 0.484718 5_2:+70782561 Msa0785670:CDS
CTTGACTCTGCCTAATATCA+AGG 0.490195 5_2:+70782982 Msa0785670:CDS
TATTTGGAAGGGGCTGCTCT+TGG 0.494287 5_2:+70784945 Msa0785670:CDS
AACCTTGACAACACCATGGA+TGG 0.505223 5_2:+70782902 Msa0785670:CDS
GAGCTTGTCTTTGCCAAGAT+GGG 0.505604 5_2:+70783336 Msa0785670:CDS
AGCCCTATCATGATGAGTGC+TGG 0.507079 5_2:+70784027 Msa0785670:intron
GCAAACTGACAAAGATAGAT+GGG 0.509312 5_2:+70782467 Msa0785670:CDS
ATCTTGGGTTGATCAAAAGT+TGG 0.516048 5_2:-70784840 None:intergenic
GAACTTACCAATGGATTGAC+CGG 0.517600 5_2:-70784487 None:intergenic
GTGCACAATGTTAGTCGGAT+TGG 0.518379 5_2:+70786297 Msa0785670:three_prime_UTR
ATGATGATGAAGTGAGAAAG+TGG 0.522348 5_2:+70784757 Msa0785670:CDS
TGGCAAAGACAAGCTCAGCT+TGG 0.525244 5_2:-70783329 None:intergenic
GGTGTTGGCATTGAAACCAT+TGG 0.529872 5_2:+70784786 Msa0785670:CDS
GGCAGACAAGTATTTGGAAG+GGG 0.535052 5_2:+70784935 Msa0785670:CDS
GATGCAGGAGCCGGTCGTAT+GGG 0.535411 5_2:+70784165 Msa0785670:CDS
GCAGCAGACATAATACGAAA+AGG 0.536262 5_2:+70784111 Msa0785670:CDS
CTCCAGCACTCATCATGATA+GGG 0.540258 5_2:-70784029 None:intergenic
ATCTTAACAACATCTTCCTC+AGG 0.540943 5_2:-70784450 None:intergenic
AACCATCCATGGTGTTGTCA+AGG 0.543770 5_2:-70782904 None:intergenic
CCAACTGCTAGAAGTGATGA+TGG 0.547629 5_2:+70786131 Msa0785670:CDS
GTGTTGGCATTGAAACCATT+GGG 0.550669 5_2:+70784787 Msa0785670:CDS
CTCATTCTTGGTATCTGGGG+AGG 0.550699 5_2:+70783285 Msa0785670:CDS
TTGGCAGACAAGTATTTGGA+AGG 0.553516 5_2:+70784933 Msa0785670:CDS
GCTTAAAGAAAGTTACCTCA+AGG 0.554726 5_2:+70782379 Msa0785670:CDS
CCTCTCATTCTTGGTATCTG+GGG 0.555448 5_2:+70783282 Msa0785670:CDS
TGTTGTTCCACCCATACGAC+CGG 0.556920 5_2:-70784175 None:intergenic
ATTGTGTGCACAATGTTAGT+CGG 0.557256 5_2:+70786292 Msa0785670:three_prime_UTR
ATACACTGTGAACAACCAAA+TGG 0.557588 5_2:+70784200 Msa0785670:CDS
AGCTGAAACTGAGGCAACCA+TGG 0.564992 5_2:-70781656 None:intergenic
CATCACAAGAGGGAAGGGTA+TGG 0.566153 5_2:+70782527 Msa0785670:CDS
AAGCTTGTGAACTCCAAAGA+AGG 0.566326 5_2:+70784813 Msa0785670:CDS
CCTACAAGAGAAGATCGTAT+TGG 0.570203 5_2:+70784393 Msa0785670:CDS
TCTTCTTTGTTATACATACC+AGG 0.570852 5_2:-70784273 None:intergenic
GTAAGTATTCCTGTTCCTGA+AGG 0.574264 5_2:+70786077 Msa0785670:CDS
GCAGGAGCCGGTCGTATGGG+TGG 0.574559 5_2:+70784168 Msa0785670:CDS
ACAAGCTTGTCCATAAAAGC+AGG 0.575624 5_2:-70782938 None:intergenic
CTTTGTGTTTGGAAACCTTG+AGG 0.575690 5_2:-70782394 None:intergenic
AGTGCTGGAGAGCTAGAAAG+TGG 0.577837 5_2:+70784042 Msa0785670:CDS
AGCTCTAACAGCTGAAACTG+AGG 0.584438 5_2:-70781665 None:intergenic
TCTTATGAGTACATTAGCAC+TGG 0.593588 5_2:+70782606 Msa0785670:CDS
TACGCTCCTCTTATTCGTGA+CGG 0.593644 5_2:+70784345 Msa0785670:CDS
TGGCAGACAAGTATTTGGAA+GGG 0.594237 5_2:+70784934 Msa0785670:CDS
CTCAAGGTTTCCAAACACAA+AGG 0.596039 5_2:+70782395 Msa0785670:CDS
AGAAAGTGGATTGCTGGTGT+TGG 0.596527 5_2:+70784771 Msa0785670:CDS
ATCTGGGGAGGTAAAGGTCA+AGG 0.603588 5_2:+70783297 Msa0785670:CDS
TTGGGTTGATCAAAAGTTGG+AGG 0.603661 5_2:-70784837 None:intergenic
ACAAGACATCACAAGAGGGA+AGG 0.605967 5_2:+70782521 Msa0785670:CDS
AATCAAGATGCTATCAAGAG+TGG 0.612496 5_2:+70784975 Msa0785670:CDS
AGCATTCATTAGGTTAAAGG+AGG 0.618724 5_2:+70786183 Msa0785670:three_prime_UTR
CAAGACATCACAAGAGGGAA+GGG 0.621491 5_2:+70782522 Msa0785670:CDS
TAATGAGTTCCAGCATCTTG+TGG 0.630506 5_2:-70782570 None:intergenic
GATCAACAAGACATCACAAG+AGG 0.631005 5_2:+70782516 Msa0785670:CDS
TAGACATGATAATGTGCCTG+AGG 0.634665 5_2:+70784434 Msa0785670:CDS
AACTTACCAATGGATTGACC+GGG 0.640234 5_2:-70784486 None:intergenic
ATCACAACACAACACAGCCA+TGG 0.640726 5_2:+70781639 Msa0785670:exon
CCCCAGATACCAAGAATGAG+AGG 0.644376 5_2:-70783282 None:intergenic
TCAGCTGTTAGAGCTGTCAG+TGG 0.648149 5_2:+70781673 Msa0785670:CDS
ACTGACAAAGATAGATGGGG+AGG 0.671037 5_2:+70782471 Msa0785670:CDS
ATCAACAAGACATCACAAGA+GGG 0.675178 5_2:+70782517 Msa0785670:CDS
CAAACTGACAAAGATAGATG+GGG 0.706759 5_2:+70782468 Msa0785670:CDS
GTACAACCTTGACAACACCA+TGG 0.736816 5_2:+70782898 Msa0785670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATATATGTAATAAAC+TGG - chr5_2:70785040-70785059 None:intergenic 10.0%
!! AACATAGTATATATATTATA+GGG - chr5_2:70785713-70785732 None:intergenic 10.0%
!! AAACATAGTATATATATTAT+AGG - chr5_2:70785714-70785733 None:intergenic 10.0%
!! ATAGAAAATCAAATAAAAAA+AGG - chr5_2:70786036-70786055 None:intergenic 10.0%
!! TTTATAAATCAAAATACCAT+GGG - chr5_2:70782018-70782037 None:intergenic 15.0%
!! ATTTATAAATCAAAATACCA+TGG - chr5_2:70782019-70782038 None:intergenic 15.0%
!! ATAAATATAGTATGATATGA+CGG + chr5_2:70782033-70782052 Msa0785670:intron 15.0%
!!! AATATTTTCATAATTTCTTC+AGG + chr5_2:70783257-70783276 Msa0785670:intron 15.0%
!!! GATGTATTAATACATTTTTT+CGG + chr5_2:70783968-70783987 Msa0785670:intron 15.0%
!! TAGTAAAAACTTATAATCTA+TGG + chr5_2:70785096-70785115 Msa0785670:intron 15.0%
!!! TTATTTCTTCTATAAACAAA+AGG - chr5_2:70785147-70785166 None:intergenic 15.0%
!! TTTGTTTATAGAAGAAATAA+TGG + chr5_2:70785147-70785166 Msa0785670:intron 15.0%
!!! AAAACATTTAAAGTATGAAT+AGG + chr5_2:70785175-70785194 Msa0785670:intron 15.0%
!!! AATTATTTAAGAGTTTTGAT+AGG - chr5_2:70785489-70785508 None:intergenic 15.0%
!!! ATTTTTTTTTTCACCTAAAA+AGG + chr5_2:70785520-70785539 Msa0785670:intron 15.0%
!!! TTTTTTTTTTCACCTAAAAA+GGG + chr5_2:70785521-70785540 Msa0785670:intron 15.0%
!!! TTTTGCTTCTTTTTAATAAA+AGG + chr5_2:70785786-70785805 Msa0785670:intron 15.0%
!! TTTAATAAAAGGCAAATTAT+AGG + chr5_2:70785797-70785816 Msa0785670:intron 15.0%
!! TTAATAAAAGGCAAATTATA+GGG + chr5_2:70785798-70785817 Msa0785670:intron 15.0%
!! TTATCATCTTGTTAAAATAT+TGG + chr5_2:70786240-70786259 Msa0785670:three_prime_UTR 15.0%
!! AACGATTATTCATAAAAAAA+TGG - chr5_2:70786332-70786351 None:intergenic 15.0%
!! CAAATAATGATGTAAATGTT+TGG + chr5_2:70781863-70781882 Msa0785670:intron 20.0%
!!! ATTTTAATAGTACAAAAGAG+TGG + chr5_2:70782098-70782117 Msa0785670:intron 20.0%
!!! CTAAATTATCAGTTTTACTT+AGG - chr5_2:70782130-70782149 None:intergenic 20.0%
!! CACATGACAAAAAAAAAAAA+AGG - chr5_2:70782670-70782689 None:intergenic 20.0%
!!! AATCCTTTTTTATATGAAGA+TGG + chr5_2:70782848-70782867 Msa0785670:intron 20.0%
!! CATCAAAATTCTTTATATTG+AGG + chr5_2:70783143-70783162 Msa0785670:intron 20.0%
!!! TCGTATGGAAAAATTTTATT+GGG + chr5_2:70784368-70784387 Msa0785670:CDS 20.0%
!! TATGTATTCGATTCAAAATT+TGG + chr5_2:70784585-70784604 Msa0785670:intron 20.0%
!!! TTTTTTTTTGCAGATTTCTT+TGG + chr5_2:70784714-70784733 Msa0785670:intron 20.0%
!!! AAGTTTTACAAACAATTGAA+AGG + chr5_2:70785243-70785262 Msa0785670:intron 20.0%
!! ATGTTTAGATTGTCAAAAAA+AGG - chr5_2:70785558-70785577 None:intergenic 20.0%
!! TATTATAAAGAGTTTGATGT+GGG - chr5_2:70785641-70785660 None:intergenic 20.0%
!! ATATTATAAAGAGTTTGATG+TGG - chr5_2:70785642-70785661 None:intergenic 20.0%
!!! GAACTGAAAACAATTTTATA+AGG + chr5_2:70785834-70785853 Msa0785670:intron 20.0%
!!! TTTTATTTGATTTTCTATGC+AGG + chr5_2:70786038-70786057 Msa0785670:intron 20.0%
!!! TTATTGTGTTCTATAGTTTT+TGG + chr5_2:70786264-70786283 Msa0785670:three_prime_UTR 20.0%
!!! TATTGTGTTCTATAGTTTTT+GGG + chr5_2:70786265-70786284 Msa0785670:three_prime_UTR 20.0%
!! AGAGAAATGTGTATTGTTTT+GGG - chr5_2:70781602-70781621 None:intergenic 25.0%
!! TAGAGAAATGTGTATTGTTT+TGG - chr5_2:70781603-70781622 None:intergenic 25.0%
! AGAATAATTGATAAGTAGCT+AGG - chr5_2:70781719-70781738 None:intergenic 25.0%
! ACATCTATGTTTCACTTAAT+TGG + chr5_2:70781958-70781977 Msa0785670:intron 25.0%
! ATGTTTCACTTAATTGGTAT+CGG + chr5_2:70781964-70781983 Msa0785670:intron 25.0%
! ATAGCATTTGAGTAAACTTT+CGG + chr5_2:70782072-70782091 Msa0785670:intron 25.0%
! AAATTACATGCCTTGATATT+AGG - chr5_2:70782995-70783014 None:intergenic 25.0%
!! AATTTAAAACCATGATCTAC+AGG - chr5_2:70783048-70783067 None:intergenic 25.0%
!!! TAGATCATGGTTTTAAATTG+CGG + chr5_2:70783049-70783068 Msa0785670:intron 25.0%
! AAGAGTTTCAATTTCAGAAA+TGG - chr5_2:70783379-70783398 None:intergenic 25.0%
!!! CTGAAATTGAAACTCTTTTT+TGG + chr5_2:70783382-70783401 Msa0785670:intron 25.0%
!!! TTTTTGGAACAGTTAATTGA+TGG + chr5_2:70783398-70783417 Msa0785670:intron 25.0%
!!! TTGAAGCTATGATTTTTTCT+AGG - chr5_2:70783450-70783469 None:intergenic 25.0%
! AAAATCATAGCTTCAAATCA+AGG + chr5_2:70783454-70783473 Msa0785670:intron 25.0%
!!! CAAATCAAGGTTTTGTAAAA+CGG + chr5_2:70783467-70783486 Msa0785670:intron 25.0%
! TGAAAAATAGACGTGATTAA+AGG + chr5_2:70783663-70783682 Msa0785670:intron 25.0%
!!! GCTGGAATTTTAAAATCATA+TGG - chr5_2:70784010-70784029 None:intergenic 25.0%
!! GTCGTATGGAAAAATTTTAT+TGG + chr5_2:70784367-70784386 Msa0785670:CDS 25.0%
! CTTGTATATAAGAGAAAGTT+CGG + chr5_2:70784551-70784570 Msa0785670:intron 25.0%
!!! AGGTTTTTTGGTTAAATGTT+TGG + chr5_2:70784657-70784676 Msa0785670:intron 25.0%
! CATGCAAATTATTCATTTGT+AGG - chr5_2:70784684-70784703 None:intergenic 25.0%
!! AACAAAAGGTGTATTCATTA+TGG - chr5_2:70785133-70785152 None:intergenic 25.0%
!!! GTATGAATAGGTATTGATTT+AGG + chr5_2:70785187-70785206 Msa0785670:intron 25.0%
! ATGAGAATCTATCTATATTC+AGG - chr5_2:70785440-70785459 None:intergenic 25.0%
!! AAAATTGTTTGAAATAGTCC+TGG + chr5_2:70785757-70785776 Msa0785670:intron 25.0%
! AAAGAAGCAAAATATATTCC+AGG - chr5_2:70785778-70785797 None:intergenic 25.0%
!! TAAAATTGTTTTCAGTTCCT+TGG - chr5_2:70785832-70785851 None:intergenic 25.0%
!!! ATATTTTTTCCCTTCCATTT+TGG - chr5_2:70785903-70785922 None:intergenic 25.0%
!! ACTCAAAAAGTATGTATGAT+TGG + chr5_2:70785988-70786007 Msa0785670:intron 25.0%
! GAATAATCTAAGCATTCATT+AGG + chr5_2:70786173-70786192 Msa0785670:exon 25.0%
TACTATAAATTCATTCCCTC+TGG + chr5_2:70781562-70781581 Msa0785670:five_prime_UTR 30.0%
!! GAGAAATGTGTATTGTTTTG+GGG - chr5_2:70781601-70781620 None:intergenic 30.0%
! TGATGTAAATGTTTGGAATC+TGG + chr5_2:70781870-70781889 Msa0785670:intron 30.0%
! AAATGTTTGGAATCTGGATT+TGG + chr5_2:70781876-70781895 Msa0785670:intron 30.0%
CATAGATGTACGATCTTAAT+AGG - chr5_2:70781947-70781966 None:intergenic 30.0%
TGTTTCACTTAATTGGTATC+GGG + chr5_2:70781965-70781984 Msa0785670:intron 30.0%
TAAATCAAAATACCATGGGT+TGG - chr5_2:70782014-70782033 None:intergenic 30.0%
TATTATCCTATGAGACACAT+TGG - chr5_2:70782284-70782303 None:intergenic 30.0%
! TTGATCATCTGAAGTATCAT+AGG - chr5_2:70782502-70782521 None:intergenic 30.0%
!!! TGGTTCGGTTTTTTAAAGAT+TGG + chr5_2:70782820-70782839 Msa0785670:intron 30.0%
CCACCATCTTCATATAAAAA+AGG - chr5_2:70782854-70782873 None:intergenic 30.0%
!!! CCTTTTTTATATGAAGATGG+TGG + chr5_2:70782851-70782870 Msa0785670:intron 30.0%
ACTATTATTCCTGTAGATCA+TGG + chr5_2:70783036-70783055 Msa0785670:intron 30.0%
TTAAATTGCGGTTGTAATCA+CGG + chr5_2:70783061-70783080 Msa0785670:intron 30.0%
TGTTGTGAACCTTTATATTG+CGG + chr5_2:70783093-70783112 Msa0785670:intron 30.0%
! TACATTTTGCCGCAATATAA+AGG - chr5_2:70783105-70783124 None:intergenic 30.0%
! GCAATTTAAAACCATGCAAT+TGG + chr5_2:70783187-70783206 Msa0785670:intron 30.0%
! CTGTAATTGCGATTTTCATA+TGG - chr5_2:70783545-70783564 None:intergenic 30.0%
AGTTGTGACTATTTACAATC+TGG - chr5_2:70783707-70783726 None:intergenic 30.0%
!! TCAAAATCCGCTTTAAAATC+TGG + chr5_2:70783815-70783834 Msa0785670:intron 30.0%
TTAACACTCACATTTGGATT+GGG - chr5_2:70783890-70783909 None:intergenic 30.0%
TTTAACACTCACATTTGGAT+TGG - chr5_2:70783891-70783910 None:intergenic 30.0%
! TAAGTGTTGCATTTACCATT+TGG - chr5_2:70784218-70784237 None:intergenic 30.0%
! TCTTCTTTGTTATACATACC+AGG - chr5_2:70784276-70784295 None:intergenic 30.0%
TCATTACCAGTAACAATGAT+AGG - chr5_2:70784312-70784331 None:intergenic 30.0%
! ATCGTATTGGTGTTTGTAAA+GGG + chr5_2:70784406-70784425 Msa0785670:CDS 30.0%
!!! ACTTTTTCGATTACTCCATT+CGG + chr5_2:70784527-70784546 Msa0785670:intron 30.0%
ATTCGATTCAAAATTTGGAC+CGG + chr5_2:70784590-70784609 Msa0785670:intron 30.0%
!!! AACAGAATGAGTAGGTTTTT+TGG + chr5_2:70784645-70784664 Msa0785670:intron 30.0%
! TCTTCACATTTTCTTGTTCT+TGG - chr5_2:70784905-70784924 None:intergenic 30.0%
AAATGTGAAGAGAGTTCAAT+TGG + chr5_2:70784914-70784933 Msa0785670:CDS 30.0%
AATGATTTACTTATGCTGGA+AGG - chr5_2:70785219-70785238 None:intergenic 30.0%
TTCCAGCATAAGTAAATCAT+TGG + chr5_2:70785218-70785237 Msa0785670:intron 30.0%
TACCAATGATTTACTTATGC+TGG - chr5_2:70785223-70785242 None:intergenic 30.0%
! ACTTCCTAAGTTCAATTTTG+AGG - chr5_2:70785671-70785690 None:intergenic 30.0%
GAATCAATCATAGACCAAAA+TGG + chr5_2:70785886-70785905 Msa0785670:intron 30.0%
AATCATAGACCAAAATGGAA+GGG + chr5_2:70785891-70785910 Msa0785670:intron 30.0%
!! TTTGATTTTCTATGCAGGTA+AGG + chr5_2:70786043-70786062 Msa0785670:intron 30.0%
CTAAGCATTCATTAGGTTAA+AGG + chr5_2:70786180-70786199 Msa0785670:three_prime_UTR 30.0%
AGCTAGGTAAAGTAACATAC+TGG - chr5_2:70781703-70781722 None:intergenic 35.0%
ATCTGGATTTGGATTCTCTA+CGG + chr5_2:70781887-70781906 Msa0785670:intron 35.0%
GATGTACGATCTTAATAGGA+CGG - chr5_2:70781943-70781962 None:intergenic 35.0%
TATAGTATGATATGACGGTC+TGG + chr5_2:70782038-70782057 Msa0785670:intron 35.0%
TGACACTAATACGTAGACAT+TGG - chr5_2:70782258-70782277 None:intergenic 35.0%
TCATTTCCAATGTGTCTCAT+AGG + chr5_2:70782275-70782294 Msa0785670:intron 35.0%
GTTCCAAGTTCATCATTCTT+TGG + chr5_2:70782351-70782370 Msa0785670:CDS 35.0%
CTTCCAAAGAATGATGAACT+TGG - chr5_2:70782357-70782376 None:intergenic 35.0%
GCTTAAAGAAAGTTACCTCA+AGG + chr5_2:70782379-70782398 Msa0785670:CDS 35.0%
AGCAAACTGACAAAGATAGA+TGG + chr5_2:70782466-70782485 Msa0785670:CDS 35.0%
GCAAACTGACAAAGATAGAT+GGG + chr5_2:70782467-70782486 Msa0785670:CDS 35.0%
CAAACTGACAAAGATAGATG+GGG + chr5_2:70782468-70782487 Msa0785670:CDS 35.0%
ATCAACAAGACATCACAAGA+GGG + chr5_2:70782517-70782536 Msa0785670:CDS 35.0%
TCTTATGAGTACATTAGCAC+TGG + chr5_2:70782606-70782625 Msa0785670:CDS 35.0%
ATGGTTCAACTGCTTGAATT+AGG + chr5_2:70782756-70782775 Msa0785670:intron 35.0%
!! TTGAATTGTCTGGTTTGGTT+CGG + chr5_2:70782805-70782824 Msa0785670:intron 35.0%
ACCATGTATGATGGTATTTC+AGG + chr5_2:70782876-70782895 Msa0785670:intron 35.0%
ACCTGAAATACCATCATACA+TGG - chr5_2:70782880-70782899 None:intergenic 35.0%
TGCAATGTAAAAACCATCCA+TGG - chr5_2:70782918-70782937 None:intergenic 35.0%
!! TTACATTGCACCTGCTTTTA+TGG + chr5_2:70782928-70782947 Msa0785670:CDS 35.0%
TTGATGTCTCTAAACGTCAT+AGG - chr5_2:70783129-70783148 None:intergenic 35.0%
GGCTGTCAATAAAGATAGAA+CGG - chr5_2:70783842-70783861 None:intergenic 35.0%
CAAATGTGAGTGTTAAACAC+CGG + chr5_2:70783894-70783913 Msa0785670:intron 35.0%
TCATCATCATCATCATCAGA+TGG - chr5_2:70783944-70783963 None:intergenic 35.0%
TTCATAAACGATCTTGATGC+AGG + chr5_2:70784150-70784169 Msa0785670:CDS 35.0%
ATACACTGTGAACAACCAAA+TGG + chr5_2:70784200-70784219 Msa0785670:CDS 35.0%
CAGGAAGTTGAACATTTGTT+GGG - chr5_2:70784257-70784276 None:intergenic 35.0%
! GATCGTATTGGTGTTTGTAA+AGG + chr5_2:70784405-70784424 Msa0785670:CDS 35.0%
ATCTTAACAACATCTTCCTC+AGG - chr5_2:70784453-70784472 None:intergenic 35.0%
! AAGATTGTTGACACTTTTCC+CGG + chr5_2:70784468-70784487 Msa0785670:CDS 35.0%
TCTAGAAGTGAACTTACCAA+TGG - chr5_2:70784499-70784518 None:intergenic 35.0%
CTCTTATATACAAGACCGAA+TGG - chr5_2:70784545-70784564 None:intergenic 35.0%
TCTCTTAGAACAGAATGAGT+AGG + chr5_2:70784637-70784656 Msa0785670:intron 35.0%
! AGATTTCTTTGGTGCACTTA+GGG + chr5_2:70784725-70784744 Msa0785670:intron 35.0%
! ATGATGATGAAGTGAGAAAG+TGG + chr5_2:70784757-70784776 Msa0785670:CDS 35.0%
!! ATCTTGGGTTGATCAAAAGT+TGG - chr5_2:70784843-70784862 None:intergenic 35.0%
AGTTTCTCCAAAGTCATCTT+GGG - chr5_2:70784858-70784877 None:intergenic 35.0%
TAGTTTCTCCAAAGTCATCT+TGG - chr5_2:70784859-70784878 None:intergenic 35.0%
! GATGACTTTGGAGAAACTAT+TGG + chr5_2:70784860-70784879 Msa0785670:CDS 35.0%
TTGGAGAAACTATTGGAGTA+TGG + chr5_2:70784867-70784886 Msa0785670:CDS 35.0%
TCAATTGGCAGACAAGTATT+TGG + chr5_2:70784929-70784948 Msa0785670:CDS 35.0%
AATCAAGATGCTATCAAGAG+TGG + chr5_2:70784975-70784994 Msa0785670:CDS 35.0%
ATCAAGAGTGGATCTTACTA+TGG + chr5_2:70784987-70785006 Msa0785670:CDS 35.0%
CACAAATTGAGTCTAGACTT+AGG - chr5_2:70785295-70785314 None:intergenic 35.0%
CGTACACATTAAAGGACTTA+GGG - chr5_2:70785364-70785383 None:intergenic 35.0%
CCTAAGTCCTTTAATGTGTA+CGG + chr5_2:70785362-70785381 Msa0785670:intron 35.0%
CACCTAAAAAGGGTAACAAA+CGG + chr5_2:70785531-70785550 Msa0785670:intron 35.0%
ACCACCTCAAAATTGAACTT+AGG + chr5_2:70785664-70785683 Msa0785670:intron 35.0%
!! TCCTAAGTTCAATTTTGAGG+TGG - chr5_2:70785668-70785687 None:intergenic 35.0%
AAAGGCAAATTATAGGGACT+AGG + chr5_2:70785804-70785823 Msa0785670:intron 35.0%
CAATCATAGACCAAAATGGA+AGG + chr5_2:70785890-70785909 Msa0785670:intron 35.0%
AGCATTCATTAGGTTAAAGG+AGG + chr5_2:70786183-70786202 Msa0785670:three_prime_UTR 35.0%
ATTGTGTGCACAATGTTAGT+CGG + chr5_2:70786292-70786311 Msa0785670:three_prime_UTR 35.0%
! GGTGAGCAAATTTTTCCAGA+GGG - chr5_2:70781580-70781599 None:intergenic 40.0%
CAAATGAGTCACTAACGTGT+TGG - chr5_2:70782196-70782215 None:intergenic 40.0%
CTTTGTGTTTGGAAACCTTG+AGG - chr5_2:70782397-70782416 None:intergenic 40.0%
CTCAAGGTTTCCAAACACAA+AGG + chr5_2:70782395-70782414 Msa0785670:CDS 40.0%
CCAGATGAAACCTTTGTGTT+TGG - chr5_2:70782408-70782427 None:intergenic 40.0%
CCAAACACAAAGGTTTCATC+TGG + chr5_2:70782405-70782424 Msa0785670:CDS 40.0%
GATCAACAAGACATCACAAG+AGG + chr5_2:70782516-70782535 Msa0785670:CDS 40.0%
TAATGAGTTCCAGCATCTTG+TGG - chr5_2:70782573-70782592 None:intergenic 40.0%
AACCAAACCAGACACTGAAT+CGG + chr5_2:70782718-70782737 Msa0785670:intron 40.0%
TCAACTGCTTGAATTAGGAC+AGG + chr5_2:70782761-70782780 Msa0785670:intron 40.0%
CAACTGCTTGAATTAGGACA+GGG + chr5_2:70782762-70782781 Msa0785670:intron 40.0%
GTTCAGTTGGTTGAATTGTC+TGG + chr5_2:70782795-70782814 Msa0785670:intron 40.0%
GTTGGTTGAATTGTCTGGTT+TGG + chr5_2:70782800-70782819 Msa0785670:intron 40.0%
ACAAGCTTGTCCATAAAAGC+AGG - chr5_2:70782941-70782960 None:intergenic 40.0%
CTTGACTCTGCCTAATATCA+AGG + chr5_2:70782982-70783001 Msa0785670:CDS 40.0%
CAATATCGTCTCCAATTGCA+TGG - chr5_2:70783201-70783220 None:intergenic 40.0%
TTCCTCTCATTCTTGGTATC+TGG + chr5_2:70783280-70783299 Msa0785670:CDS 40.0%
TCCTCTCATTCTTGGTATCT+GGG + chr5_2:70783281-70783300 Msa0785670:CDS 40.0%
AACTTACTTGATGCCCATCT+TGG - chr5_2:70783352-70783371 None:intergenic 40.0%
CAATCTGGATCAGACATATG+TGG - chr5_2:70783692-70783711 None:intergenic 40.0%
TTGCACAGTCACATGTATCT+TGG + chr5_2:70783733-70783752 Msa0785670:intron 40.0%
CTAGACTGTCTGATCTTGAT+TGG - chr5_2:70783763-70783782 None:intergenic 40.0%
!! GAACGGTCCAGATTTTAAAG+CGG - chr5_2:70783825-70783844 None:intergenic 40.0%
GTGTGACTGATCACGAATAT+TGG - chr5_2:70783863-70783882 None:intergenic 40.0%
CGGTGTTTAACACTCACATT+TGG - chr5_2:70783896-70783915 None:intergenic 40.0%
TGTTAAACACCGGCAAATGT+TGG + chr5_2:70783904-70783923 Msa0785670:intron 40.0%
! GTTTTGTGTCCAACATTTGC+CGG - chr5_2:70783916-70783935 None:intergenic 40.0%
! CTTTGTCGAATTAGTTTCGC+TGG - chr5_2:70784081-70784100 None:intergenic 40.0%
GCAGCAGACATAATACGAAA+AGG + chr5_2:70784111-70784130 Msa0785670:CDS 40.0%
CCAGGAAGTTGAACATTTGT+TGG - chr5_2:70784258-70784277 None:intergenic 40.0%
CCAACAAATGTTCAACTTCC+TGG + chr5_2:70784255-70784274 Msa0785670:CDS 40.0%
CCAATACGATCTTCTCTTGT+AGG - chr5_2:70784396-70784415 None:intergenic 40.0%
CCTACAAGAGAAGATCGTAT+TGG + chr5_2:70784393-70784412 Msa0785670:CDS 40.0%
! TAGACATGATAATGTGCCTG+AGG + chr5_2:70784434-70784453 Msa0785670:CDS 40.0%
!! AACTTACCAATGGATTGACC+GGG - chr5_2:70784489-70784508 None:intergenic 40.0%
!! GAACTTACCAATGGATTGAC+CGG - chr5_2:70784490-70784509 None:intergenic 40.0%
! CAGATTTCTTTGGTGCACTT+AGG + chr5_2:70784724-70784743 Msa0785670:intron 40.0%
! GTGTTGGCATTGAAACCATT+GGG + chr5_2:70784787-70784806 Msa0785670:CDS 40.0%
!! GTTCACAAGCTTTTTCCCAA+TGG - chr5_2:70784805-70784824 None:intergenic 40.0%
AAGCTTGTGAACTCCAAAGA+AGG + chr5_2:70784813-70784832 Msa0785670:CDS 40.0%
AAAAGTTGGAGGTCCTTCTT+TGG - chr5_2:70784829-70784848 None:intergenic 40.0%
!! TTGGGTTGATCAAAAGTTGG+AGG - chr5_2:70784840-70784859 None:intergenic 40.0%
TGATCAACCCAAGATGACTT+TGG + chr5_2:70784848-70784867 Msa0785670:CDS 40.0%
TTGGCAGACAAGTATTTGGA+AGG + chr5_2:70784933-70784952 Msa0785670:CDS 40.0%
TGGCAGACAAGTATTTGGAA+GGG + chr5_2:70784934-70784953 Msa0785670:CDS 40.0%
ATTCGACTTAACGCATCGAA+CGG + chr5_2:70785321-70785340 Msa0785670:intron 40.0%
CCGTACACATTAAAGGACTT+AGG - chr5_2:70785365-70785384 None:intergenic 40.0%
!! GACCGTTTGTTACCCTTTTT+AGG - chr5_2:70785536-70785555 None:intergenic 40.0%
ATTATAGGGACTAGGTACCA+AGG + chr5_2:70785812-70785831 Msa0785670:intron 40.0%
GTAAGTATTCCTGTTCCTGA+AGG + chr5_2:70786077-70786096 Msa0785670:CDS 40.0%
TTTGGATCTGTACATCCTTC+AGG - chr5_2:70786095-70786114 None:intergenic 40.0%
!!! GGGTCGAAATTTTTGGCATT+TGG - chr5_2:70786113-70786132 None:intergenic 40.0%
! AGCAGTTGGGTCGAAATTTT+TGG - chr5_2:70786120-70786139 None:intergenic 40.0%
CATCATCACTTCTAGCAGTT+GGG - chr5_2:70786133-70786152 None:intergenic 40.0%
! GGGTGAGCAAATTTTTCCAG+AGG - chr5_2:70781581-70781600 None:intergenic 45.0%
ATCACAACACAACACAGCCA+TGG + chr5_2:70781639-70781658 Msa0785670:exon 45.0%
! AGCTCTAACAGCTGAAACTG+AGG - chr5_2:70781668-70781687 None:intergenic 45.0%
! CACTTAATTGGTATCGGGCA+AGG + chr5_2:70781970-70781989 Msa0785670:intron 45.0%
CAGTTGAGCTTGAATAGCTC+TGG + chr5_2:70782315-70782334 Msa0785670:CDS 45.0%
ACTGACAAAGATAGATGGGG+AGG + chr5_2:70782471-70782490 Msa0785670:CDS 45.0%
CAAAGATAGATGGGGAGGTT+TGG + chr5_2:70782476-70782495 Msa0785670:CDS 45.0%
ACAAGACATCACAAGAGGGA+AGG + chr5_2:70782521-70782540 Msa0785670:CDS 45.0%
CAAGACATCACAAGAGGGAA+GGG + chr5_2:70782522-70782541 Msa0785670:CDS 45.0%
CAACCAACTGAACTGTGAAC+CGG - chr5_2:70782788-70782807 None:intergenic 45.0%
ATGGTGGTCACCATGTATGA+TGG + chr5_2:70782867-70782886 Msa0785670:intron 45.0%
GTACAACCTTGACAACACCA+TGG + chr5_2:70782898-70782917 Msa0785670:CDS 45.0%
AACCTTGACAACACCATGGA+TGG + chr5_2:70782902-70782921 Msa0785670:CDS 45.0%
!! AACCATCCATGGTGTTGTCA+AGG - chr5_2:70782907-70782926 None:intergenic 45.0%
AGGCAGAGTCAAGAAGTTCT+TGG - chr5_2:70782975-70782994 None:intergenic 45.0%
! CTTCAGGTTCCTCTCATTCT+TGG + chr5_2:70783273-70783292 Msa0785670:intron 45.0%
CCTCTCATTCTTGGTATCTG+GGG + chr5_2:70783282-70783301 Msa0785670:CDS 45.0%
TGAGCTTGTCTTTGCCAAGA+TGG + chr5_2:70783335-70783354 Msa0785670:CDS 45.0%
GAGCTTGTCTTTGCCAAGAT+GGG + chr5_2:70783336-70783355 Msa0785670:CDS 45.0%
! GTAAAACGGTTTTGCAGCCA+CGG + chr5_2:70783481-70783500 Msa0785670:intron 45.0%
TGACGTTGCAACTATAACCG+TGG - chr5_2:70783501-70783520 None:intergenic 45.0%
CTCCAGCACTCATCATGATA+GGG - chr5_2:70784032-70784051 None:intergenic 45.0%
TCTCCAGCACTCATCATGAT+AGG - chr5_2:70784033-70784052 None:intergenic 45.0%
GAGCTAGAAAGTGGAAATGC+AGG + chr5_2:70784051-70784070 Msa0785670:CDS 45.0%
CGTGTGCCTATCATTGTTAC+TGG + chr5_2:70784303-70784322 Msa0785670:CDS 45.0%
TACGCTCCTCTTATTCGTGA+CGG + chr5_2:70784345-70784364 Msa0785670:CDS 45.0%
ATACGACCGTCACGAATAAG+AGG - chr5_2:70784354-70784373 None:intergenic 45.0%
TCTTATTCGTGACGGTCGTA+TGG + chr5_2:70784353-70784372 Msa0785670:CDS 45.0%
! ACTTTTCCCGGTCAATCCAT+TGG + chr5_2:70784480-70784499 Msa0785670:CDS 45.0%
!! GAAGTGAGAAAGTGGATTGC+TGG + chr5_2:70784765-70784784 Msa0785670:CDS 45.0%
!! AGAAAGTGGATTGCTGGTGT+TGG + chr5_2:70784771-70784790 Msa0785670:CDS 45.0%
!! GGTGTTGGCATTGAAACCAT+TGG + chr5_2:70784786-70784805 Msa0785670:CDS 45.0%
GGCAGACAAGTATTTGGAAG+GGG + chr5_2:70784935-70784954 Msa0785670:CDS 45.0%
GTCCTTTAATGTGTACGGAC+AGG + chr5_2:70785367-70785386 Msa0785670:intron 45.0%
TGCCTGTCCGTACACATTAA+AGG - chr5_2:70785372-70785391 None:intergenic 45.0%
TCTGTACATCCTTCAGGAAC+AGG - chr5_2:70786089-70786108 None:intergenic 45.0%
CCATCATCACTTCTAGCAGT+TGG - chr5_2:70786134-70786153 None:intergenic 45.0%
CCAACTGCTAGAAGTGATGA+TGG + chr5_2:70786131-70786150 Msa0785670:CDS 45.0%
GTGCACAATGTTAGTCGGAT+TGG + chr5_2:70786297-70786316 Msa0785670:three_prime_UTR 45.0%
!!! TTTTTTTATAAATACTTTAA+TGG - chr5_2:70785740-70785759 None:intergenic 5.0%
AGCTGAAACTGAGGCAACCA+TGG - chr5_2:70781659-70781678 None:intergenic 50.0%
TCAGCTGTTAGAGCTGTCAG+TGG + chr5_2:70781673-70781692 Msa0785670:CDS 50.0%
GCAAGGACCGACTAATCTAG+CGG + chr5_2:70781987-70782006 Msa0785670:intron 50.0%
! GGTTGGTCCGCTAGATTAGT+CGG - chr5_2:70781997-70782016 None:intergenic 50.0%
! TAATCTAGCGGACCAACCCA+TGG + chr5_2:70781999-70782018 Msa0785670:intron 50.0%
CATCACAAGAGGGAAGGGTA+TGG + chr5_2:70782527-70782546 Msa0785670:CDS 50.0%
TTCCAAGCACCACAAGATGC+TGG + chr5_2:70782561-70782580 Msa0785670:CDS 50.0%
TTCCAGCATCTTGTGGTGCT+TGG - chr5_2:70782566-70782585 None:intergenic 50.0%
!! CACCGATTCAGTGTCTGGTT+TGG - chr5_2:70782723-70782742 None:intergenic 50.0%
ACTGAATCGGTGAGACCTCT+AGG + chr5_2:70782731-70782750 Msa0785670:intron 50.0%
GCAGTTGAACCATGACCTAG+AGG - chr5_2:70782749-70782768 None:intergenic 50.0%
TGCTTGAATTAGGACAGGGC+CGG + chr5_2:70782766-70782785 Msa0785670:intron 50.0%
CCCCAGATACCAAGAATGAG+AGG - chr5_2:70783285-70783304 None:intergenic 50.0%
CTCATTCTTGGTATCTGGGG+AGG + chr5_2:70783285-70783304 Msa0785670:CDS 50.0%
CTTGGTATCTGGGGAGGTAA+AGG + chr5_2:70783291-70783310 Msa0785670:CDS 50.0%
ATCTGGGGAGGTAAAGGTCA+AGG + chr5_2:70783297-70783316 Msa0785670:CDS 50.0%
TGGCAAAGACAAGCTCAGCT+TGG - chr5_2:70783332-70783351 None:intergenic 50.0%
AGCACTCATCATGATAGGGC+TGG - chr5_2:70784028-70784047 None:intergenic 50.0%
AGCCCTATCATGATGAGTGC+TGG + chr5_2:70784027-70784046 Msa0785670:intron 50.0%
! AGTGCTGGAGAGCTAGAAAG+TGG + chr5_2:70784042-70784061 Msa0785670:CDS 50.0%
AACGATCTTGATGCAGGAGC+CGG + chr5_2:70784156-70784175 Msa0785670:CDS 50.0%
TGTTGTTCCACCCATACGAC+CGG - chr5_2:70784178-70784197 None:intergenic 50.0%
GAGTCAACAGTCGATGTGTC+CGG - chr5_2:70784612-70784631 None:intergenic 50.0%
TATTTGGAAGGGGCTGCTCT+TGG + chr5_2:70784945-70784964 Msa0785670:CDS 50.0%
TGTGTACGGACAGGCACAAT+TGG + chr5_2:70785376-70785395 Msa0785670:intron 50.0%
!! GGTCTCACCGATTCAGTGTC+TGG - chr5_2:70782728-70782747 None:intergenic 55.0%
TCGGTGAGACCTCTAGGTCA+TGG + chr5_2:70782737-70782756 Msa0785670:intron 55.0%
GCTATGTGCCAGCTTGTGTC+TGG - chr5_2:70783626-70783645 None:intergenic 55.0%
! GGGCCGGTTCACAGTTCAGT+TGG + chr5_2:70782782-70782801 Msa0785670:intron 60.0%
TGATGCAGGAGCCGGTCGTA+TGG + chr5_2:70784164-70784183 Msa0785670:CDS 60.0%
GATGCAGGAGCCGGTCGTAT+GGG + chr5_2:70784165-70784184 Msa0785670:CDS 60.0%
CACGCGCACCAGACACAAGC+TGG + chr5_2:70783615-70783634 Msa0785670:intron 65.0%
GCAGGAGCCGGTCGTATGGG+TGG + chr5_2:70784168-70784187 Msa0785670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 70781536 70786437 70781536 ID=Msa0785670;Name=Msa0785670
chr5_2 mRNA 70781536 70786437 70781536 ID=Msa0785670-mRNA-1;Parent=Msa0785670;Name=Msa0785670-mRNA-1;_AED=0.02;_eAED=0.02;_QI=122|0.83|0.85|1|1|1|7|259|483
chr5_2 exon 70781536 70781702 70781536 ID=Msa0785670-mRNA-1:exon:21323;Parent=Msa0785670-mRNA-1
chr5_2 exon 70782297 70782637 70782297 ID=Msa0785670-mRNA-1:exon:21324;Parent=Msa0785670-mRNA-1
chr5_2 exon 70782898 70783003 70782898 ID=Msa0785670-mRNA-1:exon:21325;Parent=Msa0785670-mRNA-1
chr5_2 exon 70783279 70783364 70783279 ID=Msa0785670-mRNA-1:exon:21326;Parent=Msa0785670-mRNA-1
chr5_2 exon 70784029 70784501 70784029 ID=Msa0785670-mRNA-1:exon:21327;Parent=Msa0785670-mRNA-1
chr5_2 exon 70784727 70785008 70784727 ID=Msa0785670-mRNA-1:exon:21328;Parent=Msa0785670-mRNA-1
chr5_2 exon 70786060 70786437 70786060 ID=Msa0785670-mRNA-1:exon:21329;Parent=Msa0785670-mRNA-1
chr5_2 five_prime_UTR 70781536 70781657 70781536 ID=Msa0785670-mRNA-1:five_prime_utr;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70781658 70781702 70781658 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70782297 70782637 70782297 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70782898 70783003 70782898 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70783279 70783364 70783279 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70784029 70784501 70784029 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70784727 70785008 70784727 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 CDS 70786060 70786178 70786060 ID=Msa0785670-mRNA-1:cds;Parent=Msa0785670-mRNA-1
chr5_2 three_prime_UTR 70786179 70786437 70786179 ID=Msa0785670-mRNA-1:three_prime_utr;Parent=Msa0785670-mRNA-1
Gene Sequence

>Msa0785670

ATGGTTGCCTCAGTTTCAGCTGTTAGAGCTGTCAGTGGAACACCAGATAATACTGTGATATTGCAGTTGAGCTTGAATAGCTCTGGAGCAGTAGCTTCAGTTCCAAGTTCATCATTCTTTGGAAGCAGCTTAAAGAAAGTTACCTCAAGGTTTCCAAACACAAAGGTTTCATCTGGAAGTATCAAAATTGTTTGTGCTGAGATTGATGAAAGCAAGCAAACTGACAAAGATAGATGGGGAGGTTTGGCCTATGATACTTCAGATGATCAACAAGACATCACAAGAGGGAAGGGTATGGTTGATTCAGTTTTCCAAGCACCACAAGATGCTGGAACTCATTATGCAGTCATGAGCTCTTATGAGTACATTAGCACTGGACTTAGACAGTACAACCTTGACAACACCATGGATGGTTTTTACATTGCACCTGCTTTTATGGACAAGCTTGTTGTGCACATCACCAAGAACTTCTTGACTCTGCCTAATATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGTAAAGGTCAAGGAAAATCTTTCCAAGCTGAGCTTGTCTTTGCCAAGATGGGCATCAACCCTATCATGATGAGTGCTGGAGAGCTAGAAAGTGGAAATGCAGGAGAACCAGCGAAACTAATTCGACAAAGATATAGAGAAGCAGCAGACATAATACGAAAAGGAAAAATGTGTTGTCTCTTCATAAACGATCTTGATGCAGGAGCCGGTCGTATGGGTGGAACAACACAATACACTGTGAACAACCAAATGGTAAATGCAACACTTATGAACATTGCTGATAACCCAACAAATGTTCAACTTCCTGGTATGTATAACAAAGAAGAGAATGCACGTGTGCCTATCATTGTTACTGGTAATGATTTTTCAACATTGTACGCTCCTCTTATTCGTGACGGTCGTATGGAAAAATTTTATTGGGCACCTACAAGAGAAGATCGTATTGGTGTTTGTAAAGGGATTTTTAGACATGATAATGTGCCTGAGGAAGATGTTGTTAAGATTGTTGACACTTTTCCCGGTCAATCCATTGATTTCTTTGGTGCACTTAGGGCAAGAGTATATGATGATGAAGTGAGAAAGTGGATTGCTGGTGTTGGCATTGAAACCATTGGGAAAAAGCTTGTGAACTCCAAAGAAGGACCTCCAACTTTTGATCAACCCAAGATGACTTTGGAGAAACTATTGGAGTATGGTAACATGCTTGTCCAAGAACAAGAAAATGTGAAGAGAGTTCAATTGGCAGACAAGTATTTGGAAGGGGCTGCTCTTGGTGATGCTAATCAAGATGCTATCAAGAGTGGATCTTACTATGGTAAGGCAGCTCAACAAGTAAGTATTCCTGTTCCTGAAGGATGTACAGATCCAAATGCCAAAAATTTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAA

Protein sequence

>Msa0785670

MVASVSAVRAVSGTPDNTVILQLSLNSSGAVASVPSSSFFGSSLKKVTSRFPNTKVSSGSIKIVCAEIDESKQTDKDRWGGLAYDTSDDQQDITRGKGMVDSVFQAPQDAGTHYAVMSSYEYISTGLRQYNLDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRHDNVPEEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWIAGVGIETIGKKLVNSKEGPPTFDQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLEGAALGDANQDAIKSGSYYGKAAQQVSIPVPEGCTDPNAKNFDPTARSDDGTCLYTFE*