Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105600 | XP_039689851.1 | 91.962 | 846 | 62 | 3 | 1 | 842 | 1 | 844 | 0.0 | 1513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105600 | A0A396JKY1 | 91.489 | 846 | 62 | 3 | 1 | 842 | 1 | 840 | 0.0 | 1500 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061050 | Msa0105600 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0105600 | Msa0158020 | 0.806217 | 9.155068e-50 | -8.615850e-47 |
| Msa0105600 | Msa0175220 | 0.802623 | 5.139479e-49 | -8.615850e-47 |
| Msa0105600 | Msa0258380 | 0.804095 | 2.545999e-49 | -8.615850e-47 |
| Msa0105600 | Msa0288220 | 0.811181 | 7.960485e-51 | -8.615850e-47 |
| Msa0105600 | Msa0528740 | 0.817503 | 3.187553e-52 | -8.615850e-47 |
| Msa0105600 | Msa0544600 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0105600 | Msa0548710 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
| Msa0105600 | Msa0569030 | 0.811743 | 6.010674e-51 | -8.615850e-47 |
| Msa0105600 | Msa0571250 | 0.811829 | 5.755211e-51 | -8.615850e-47 |
| Msa0105600 | Msa0574170 | 0.809878 | 1.521726e-50 | -8.615850e-47 |
| Msa0105600 | Msa0575890 | 0.804054 | 2.597187e-49 | -8.615850e-47 |
| Msa0105600 | Msa0598260 | 0.809312 | 2.013765e-50 | -8.615850e-47 |
| Msa0105600 | Msa0622690 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0105600 | Msa0637910 | 0.813037 | 3.134134e-51 | -8.615850e-47 |
| Msa0105600 | Msa0650360 | 0.831332 | 1.772309e-55 | -8.615850e-47 |
| Msa0105600 | Msa0668160 | 0.810911 | 9.106270e-51 | -8.615850e-47 |
| Msa0105600 | Msa0685880 | 0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0105600 | Msa0775580 | 0.820732 | 5.872415e-53 | -8.615850e-47 |
| Msa0105600 | Msa0819440 | 0.802450 | 5.577182e-49 | -8.615850e-47 |
| Msa0105600 | Msa0824140 | 0.813936 | 1.988143e-51 | -8.615850e-47 |
| Msa0105600 | Msa0863250 | 0.813968 | 1.956127e-51 | -8.615850e-47 |
| Msa0105600 | Msa0967700 | 0.800621 | 1.322338e-48 | -8.615850e-47 |
| Msa0105600 | Msa0970050 | 0.819584 | 1.075633e-52 | -8.615850e-47 |
| Msa0105600 | Msa1016670 | 0.803135 | 4.027889e-49 | -8.615850e-47 |
| Msa0105600 | Msa1061520 | 0.800583 | 1.346432e-48 | -8.615850e-47 |
| Msa0105600 | Msa1126170 | 0.810361 | 1.197732e-50 | -8.615850e-47 |
| Msa0105600 | Msa1130650 | 0.816885 | 4.390580e-52 | -8.615850e-47 |
| Msa0105600 | Msa1151970 | 0.807714 | 4.417347e-50 | -8.615850e-47 |
| Msa0105600 | Msa1161760 | 0.817524 | 3.154401e-52 | -8.615850e-47 |
| Msa0105600 | Msa1229690 | 0.801722 | 7.872489e-49 | -8.615850e-47 |
| Msa0105600 | Msa1356410 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0105600 | Msa1356460 | 0.819398 | 1.186258e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105600 | MtrunA17_Chr1g0160911 | 91.489 | 846 | 62 | 3 | 1 | 842 | 1 | 840 | 0.0 | 1500 |
| Msa0105600 | MtrunA17_Chr3g0106931 | 32.620 | 187 | 118 | 4 | 122 | 306 | 580 | 760 | 9.43e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105600 | AT1G23180.1 | 54.078 | 797 | 328 | 8 | 50 | 840 | 68 | 832 | 0.0 | 804 |
| Msa0105600 | AT1G23180.2 | 53.425 | 584 | 240 | 6 | 50 | 628 | 68 | 624 | 0.0 | 579 |
Find 192 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAATGTCTCACCAATTT+TGG | 0.103166 | 1_3:+14167337 | None:intergenic |
| TATAACAAACCTTCTAAATT+TGG | 0.153821 | 1_3:-14165961 | Msa0105600:CDS |
| CTTTAACTGCATCTCTTTAT+TGG | 0.159287 | 1_3:+14164347 | None:intergenic |
| CTTTGCTGCGGAGGGGAATA+TGG | 0.171865 | 1_3:+14163347 | None:intergenic |
| AACTCGAGAAATTCTATAAT+TGG | 0.184777 | 1_3:-14162700 | Msa0105600:three_prime_UTR |
| CCTTGGTCCTTATTTGTAAA+AGG | 0.188169 | 1_3:-14162815 | Msa0105600:three_prime_UTR |
| CAAAATCTCTTGAAAATTTC+GGG | 0.195077 | 1_3:-14163794 | Msa0105600:intron |
| GCAAAATCTCTTGAAAATTT+CGG | 0.195502 | 1_3:-14163795 | Msa0105600:CDS |
| TTGGTTATGTATCTTAGTTT+TGG | 0.224554 | 1_3:-14162768 | Msa0105600:three_prime_UTR |
| GGAAGCTGCAGCGGGTATTT+TGG | 0.228128 | 1_3:-14167416 | Msa0105600:CDS |
| GCAAAAGTCAATGCAATTAT+TGG | 0.230500 | 1_3:-14165883 | Msa0105600:CDS |
| AGGGAGTTTGGAGGGTGATT+TGG | 0.246859 | 1_3:+14168798 | None:intergenic |
| ACGTGGGTTGTATGACTTAT+AGG | 0.253698 | 1_3:+14166032 | None:intergenic |
| GGCGCATCAGAAGTACTTAT+TGG | 0.256084 | 1_3:-14165940 | Msa0105600:CDS |
| AGCAGGTGTTATTCCAAAAT+TGG | 0.260256 | 1_3:-14167350 | Msa0105600:intron |
| GCCTTCTTAGATTCATTAAC+TGG | 0.272768 | 1_3:+14164232 | None:intergenic |
| TTTAACTGCATCTCTTTATT+GGG | 0.277302 | 1_3:+14164348 | None:intergenic |
| TGATTCTACTAGTGGATTCT+TGG | 0.279046 | 1_3:-14162787 | Msa0105600:three_prime_UTR |
| CGCATCTGTTCTTGAGTTTG+TGG | 0.296059 | 1_3:-14163888 | Msa0105600:CDS |
| TTAGTTCCTGTGCCATTAAT+AGG | 0.303101 | 1_3:-14166063 | Msa0105600:CDS |
| ATTTCTGTGGATATTGAAAA+TGG | 0.303359 | 1_3:-14163836 | Msa0105600:CDS |
| CCTGGCAAAGAGAGGGAGTT+TGG | 0.307481 | 1_3:+14168786 | None:intergenic |
| GGAAGGGGCTGTGTATTCTT+TGG | 0.309325 | 1_3:-14163107 | Msa0105600:CDS |
| GGTTGGAGGAAGAGGGTGTT+AGG | 0.316836 | 1_3:+14168896 | None:intergenic |
| CAATAAAGAGATGCAGTTAA+AGG | 0.319321 | 1_3:-14164346 | Msa0105600:intron |
| CTTTCGATTTCTGTGCCATC+TGG | 0.319788 | 1_3:+14165988 | None:intergenic |
| ACTTCATTTGCTCAGGAGTT+TGG | 0.324562 | 1_3:-14162921 | Msa0105600:CDS |
| AACAAGCTATAATTACTCTT+TGG | 0.337922 | 1_3:-14167882 | Msa0105600:CDS |
| TAGGCTGCAGCACCTATTAA+TGG | 0.337954 | 1_3:+14166051 | None:intergenic |
| GTTAAACTAAGTTCTCTATC+TGG | 0.338525 | 1_3:-14163304 | Msa0105600:CDS |
| TATCTTCAATCGACCAATAT+AGG | 0.346902 | 1_3:-14167726 | Msa0105600:CDS |
| GCTGGCAGCGACGCAAGCTT+TGG | 0.349598 | 1_3:-14165572 | Msa0105600:CDS |
| GACAATATAATGCAATTTCC+TGG | 0.354985 | 1_3:-14167829 | Msa0105600:CDS |
| TGACAGAACAATTCTTCTTA+AGG | 0.360300 | 1_3:+14162967 | None:intergenic |
| AGGAAGAGGGTGTTAGGATT+GGG | 0.360457 | 1_3:+14168902 | None:intergenic |
| TCTGATGCGCCAAATTTAGA+AGG | 0.361169 | 1_3:+14165952 | None:intergenic |
| AGTGTTAAGGTTGGAGGAAG+AGG | 0.366186 | 1_3:+14168888 | None:intergenic |
| CAGGAAATAGATGAAGTAGA+AGG | 0.367189 | 1_3:-14167988 | Msa0105600:CDS |
| TGCGGAGCGTGTCAATGAAA+TGG | 0.369008 | 1_3:+14163383 | None:intergenic |
| TTCCCCTCCGCAGCAAAGAT+TGG | 0.377007 | 1_3:-14163342 | Msa0105600:CDS |
| AATGAATCTAAGAAGGCATT+TGG | 0.382340 | 1_3:-14164226 | Msa0105600:CDS |
| TCAATATCCACAGAAATAAT+CGG | 0.385085 | 1_3:+14163842 | None:intergenic |
| AATACTGTATAATCTTAGTA+TGG | 0.386852 | 1_3:-14163035 | Msa0105600:CDS |
| GTGATCAGAATGACCGTTAT+TGG | 0.387267 | 1_3:+14168747 | None:intergenic |
| CCGAACTAGATTCTGCTCTA+AGG | 0.388734 | 1_3:+14167782 | None:intergenic |
| CTGCTACAGAATTCCTATAT+TGG | 0.391475 | 1_3:+14167713 | None:intergenic |
| GAGGAAGAGGGTGTTAGGAT+TGG | 0.392316 | 1_3:+14168901 | None:intergenic |
| AAGCTTGCGTCGCTGCCAGC+TGG | 0.396449 | 1_3:+14165575 | None:intergenic |
| TCTAATGACTTTAGATGCTT+CGG | 0.398255 | 1_3:+14166158 | None:intergenic |
| TCCGACGAAGGGTCTGGAAC+TGG | 0.402248 | 1_3:-14168992 | Msa0105600:five_prime_UTR |
| TTCCACAGGAGCTATTATTT+CGG | 0.403093 | 1_3:-14163128 | Msa0105600:CDS |
| ATTTGAGGACGAAGTCTACT+TGG | 0.408181 | 1_3:-14162742 | Msa0105600:three_prime_UTR |
| CCAAACTCCCTCTCTTTGCC+AGG | 0.412759 | 1_3:-14168786 | Msa0105600:CDS |
| AGCTGGAGCTATTGCGGAAA+AGG | 0.415818 | 1_3:-14164737 | Msa0105600:intron |
| TTGATCTGTTCTACAAGTCT+TGG | 0.426493 | 1_3:+14163226 | None:intergenic |
| TTCATTCTCTTTAGAAGCAC+AGG | 0.426809 | 1_3:-14163200 | Msa0105600:CDS |
| CATTCAGCACTTCTAGCTGC+TGG | 0.435416 | 1_3:-14163001 | Msa0105600:CDS |
| GCCTTGTTTGTTCGTATGCT+AGG | 0.436011 | 1_3:-14167931 | Msa0105600:CDS |
| CTCTTTAGAAGCACAGGAAA+AGG | 0.436036 | 1_3:-14163194 | Msa0105600:CDS |
| TATCAAGTGGATCATGATCT+AGG | 0.436132 | 1_3:+14167908 | None:intergenic |
| TTACAGAATTCTTGTTATTG+AGG | 0.445107 | 1_3:-14166091 | Msa0105600:CDS |
| AGGAAATAGATGAAGTAGAA+GGG | 0.446774 | 1_3:-14167987 | Msa0105600:CDS |
| TTAGATGCTTCGGAGTCATA+TGG | 0.450507 | 1_3:+14166168 | None:intergenic |
| GGGGAATCATCTTCTGACTT+TGG | 0.451107 | 1_3:-14167967 | Msa0105600:CDS |
| TTCTTGTAAACTGGCTAAAG+AGG | 0.452634 | 1_3:+14163916 | None:intergenic |
| AGAACAATTCTTCTTAAGGC+TGG | 0.453913 | 1_3:+14162971 | None:intergenic |
| TCGGCTTGTGAGGCAGCTGC+AGG | 0.460226 | 1_3:-14167763 | Msa0105600:CDS |
| GCGGAGCGTGTCAATGAAAT+GGG | 0.462693 | 1_3:+14163384 | None:intergenic |
| AGGAATTCTGTAGCAGATAG+TGG | 0.465149 | 1_3:-14167706 | Msa0105600:CDS |
| TGTACCGGTGAGTCGATGGC+TGG | 0.467426 | 1_3:-14162585 | Msa0105600:three_prime_UTR |
| TTAAAACGCTCAGACGTAGC+TGG | 0.468741 | 1_3:-14164754 | Msa0105600:CDS |
| CTTTGGCAATATTCACTTGG+TGG | 0.469366 | 1_3:-14167865 | Msa0105600:CDS |
| CCTTCGTCGGAAAACAAGAT+AGG | 0.472598 | 1_3:+14169004 | None:intergenic |
| ACATATGCGTATTGCATTCA+AGG | 0.476617 | 1_3:-14165653 | Msa0105600:CDS |
| AAAGGGCACTTCATTTGCTC+AGG | 0.479741 | 1_3:-14162928 | Msa0105600:CDS |
| TCAAGGAGGCTGGTGCAGTT+AGG | 0.484639 | 1_3:-14165636 | Msa0105600:CDS |
| TCGTGTTGGTGCTATTGAAA+TGG | 0.486108 | 1_3:-14165836 | Msa0105600:CDS |
| GTGTTAAGGTTGGAGGAAGA+GGG | 0.486174 | 1_3:+14168889 | None:intergenic |
| CAATGATAATGCAGTCCAGC+TGG | 0.486189 | 1_3:-14165590 | Msa0105600:CDS |
| TCCCCTCCGCAGCAAAGATT+GGG | 0.486285 | 1_3:-14163341 | Msa0105600:CDS |
| CCTTAGAGCAGAATCTAGTT+CGG | 0.486396 | 1_3:-14167782 | Msa0105600:CDS |
| CGCGTCTGACACTCTTGCAT+TGG | 0.486741 | 1_3:-14165774 | Msa0105600:CDS |
| AGAATTCTTGTTATTGAGGA+AGG | 0.486981 | 1_3:-14166087 | Msa0105600:CDS |
| TGCTGCAGATATTGCAAGAC+CGG | 0.487218 | 1_3:+14163465 | None:intergenic |
| TATGTTTAGAAGAACATCCT+TGG | 0.490738 | 1_3:-14162832 | Msa0105600:three_prime_UTR |
| GCGCGAAATGAGAAGTGTTA+AGG | 0.491645 | 1_3:+14168875 | None:intergenic |
| GCATTTGGTGGAGCCGATGA+TGG | 0.492074 | 1_3:-14164211 | Msa0105600:CDS |
| TTTGCTGCGGAGGGGAATAT+GGG | 0.494178 | 1_3:+14163348 | None:intergenic |
| ATTGAAGAAGGTAGTGAAAG+AGG | 0.498186 | 1_3:-14163076 | Msa0105600:CDS |
| AAGTAGACTTCGTCCTCAAA+TGG | 0.498346 | 1_3:+14162744 | None:intergenic |
| TACCCAATCTTTGCTGCGGA+GGG | 0.498761 | 1_3:+14163339 | None:intergenic |
| TTGGAAACATGACGAGTCCA+TGG | 0.503224 | 1_3:-14162902 | Msa0105600:exon |
| CGTATTGCATTCAAGGAGGC+TGG | 0.506096 | 1_3:-14165646 | Msa0105600:CDS |
| AGCATCTAAAGTCATTAGAA+AGG | 0.509035 | 1_3:-14166154 | Msa0105600:CDS |
| ATTGCTGACACAATCATCCT+TGG | 0.510822 | 1_3:-14167662 | Msa0105600:CDS |
| TAATTCCTTTGATCCATCAT+CGG | 0.513509 | 1_3:+14164198 | None:intergenic |
| CGAGGAAGAGAGAGTAACTC+TGG | 0.516606 | 1_3:+14168828 | None:intergenic |
| CAACAATTCCTTGTTCGTGT+TGG | 0.517289 | 1_3:-14165850 | Msa0105600:CDS |
| ATGAGAAGTGTTAAGGTTGG+AGG | 0.518276 | 1_3:+14168882 | None:intergenic |
| AGTGTAACTTCTACGTTGAT+CGG | 0.520501 | 1_3:+14163262 | None:intergenic |
| CTTTCATATCCTCATCATCA+AGG | 0.521881 | 1_3:+14167443 | None:intergenic |
| CTACCCAATCTTTGCTGCGG+AGG | 0.523971 | 1_3:+14163338 | None:intergenic |
| TGTTTAAAGATTCCTTCCCA+TGG | 0.524675 | 1_3:+14162885 | None:intergenic |
| CCATGATGTCATGGTTAACA+TGG | 0.527085 | 1_3:+14167377 | None:intergenic |
| GAAATAATCGGACTCAGTGT+TGG | 0.530686 | 1_3:+14163854 | None:intergenic |
| ACTCGTAGTTGCACCAATAA+CGG | 0.531040 | 1_3:-14168760 | Msa0105600:CDS |
| ACTCTTTGGCAATATTCACT+TGG | 0.531474 | 1_3:-14167868 | Msa0105600:CDS |
| CATGACATCATGGTTGAAGC+AGG | 0.531883 | 1_3:-14167367 | Msa0105600:CDS |
| ATTCAGCACTTCTAGCTGCT+GGG | 0.532272 | 1_3:-14163000 | Msa0105600:CDS |
| GAACAATTCTTCTTAAGGCT+GGG | 0.533123 | 1_3:+14162972 | None:intergenic |
| TTGGTGAAGCTGATTGAAGA+AGG | 0.533346 | 1_3:-14163088 | Msa0105600:CDS |
| ATAGCTTGTTCTCTATCAAG+TGG | 0.535682 | 1_3:+14167895 | None:intergenic |
| CACCCTCGGTTTCAATCACT+CGG | 0.536142 | 1_3:+14164800 | None:intergenic |
| ACACTCTTGCATTGGATCGA+CGG | 0.536563 | 1_3:-14165766 | Msa0105600:CDS |
| ACAGGAGCTATTATTTCGGA+AGG | 0.538014 | 1_3:-14163124 | Msa0105600:CDS |
| CTTTGGAAAAGCTGTCTGCT+AGG | 0.538845 | 1_3:-14165555 | Msa0105600:intron |
| AGGAGCTATTATTTCGGAAG+GGG | 0.539631 | 1_3:-14163122 | Msa0105600:CDS |
| ACCAGTTAATGAATCTAAGA+AGG | 0.539869 | 1_3:-14164233 | Msa0105600:CDS |
| GTGCAGTTAGGCATTTAGTA+CGG | 0.544923 | 1_3:-14165624 | Msa0105600:CDS |
| GGTGCAACTACGAGTGAACC+TGG | 0.545604 | 1_3:+14168768 | None:intergenic |
| GAATCTAAGAAGGCATTTGG+TGG | 0.547826 | 1_3:-14164223 | Msa0105600:CDS |
| ACAATCATCCTTGGCTTCTG+AGG | 0.547831 | 1_3:-14167653 | Msa0105600:intron |
| TCTGTGCCATCTGGAAATGC+AGG | 0.548785 | 1_3:+14165997 | None:intergenic |
| AGCAAGTTACATCTTTGTAC+CGG | 0.554400 | 1_3:-14162600 | Msa0105600:three_prime_UTR |
| CTTAGTAGAATAGTATCTGA+AGG | 0.555239 | 1_3:-14163160 | Msa0105600:CDS |
| GGAAATAGATGAAGTAGAAG+GGG | 0.555447 | 1_3:-14167986 | Msa0105600:CDS |
| GAAGGGGTGGTAGATTCCAC+AGG | 0.559231 | 1_3:-14163142 | Msa0105600:CDS |
| AGAATCTAGTTCGGCTTGTG+AGG | 0.559361 | 1_3:-14167773 | Msa0105600:CDS |
| TTCCTATACCTCAGAAGCCA+AGG | 0.564670 | 1_3:+14167645 | None:intergenic |
| TCTTTGTACCGGTGAGTCGA+TGG | 0.571158 | 1_3:-14162589 | Msa0105600:three_prime_UTR |
| ATAGAGAACTTAGTTTAACT+AGG | 0.573283 | 1_3:+14163308 | None:intergenic |
| TAGAATAGTATCTGAAGGGG+TGG | 0.574461 | 1_3:-14163155 | Msa0105600:CDS |
| AAAACCAGCCATCGACTCAC+CGG | 0.575863 | 1_3:+14162581 | None:intergenic |
| ACTGAGTCCGATTATTTCTG+TGG | 0.577062 | 1_3:-14163849 | Msa0105600:CDS |
| ATATGCTATTGAACTTGAAG+AGG | 0.580089 | 1_3:-14163488 | Msa0105600:CDS |
| AGACGTAGCTGGAGCTATTG+CGG | 0.580587 | 1_3:-14164743 | Msa0105600:CDS |
| TTTGAGGACGAAGTCTACTT+GGG | 0.581237 | 1_3:-14162741 | Msa0105600:three_prime_UTR |
| GGCAAAGAGAGGGAGTTTGG+AGG | 0.581474 | 1_3:+14168789 | None:intergenic |
| GGGTGATTTGGAAGAGTACG+AGG | 0.582661 | 1_3:+14168810 | None:intergenic |
| CAGGAGCTATTATTTCGGAA+GGG | 0.582745 | 1_3:-14163123 | Msa0105600:CDS |
| CCATGTTAACCATGACATCA+TGG | 0.583441 | 1_3:-14167377 | Msa0105600:CDS |
| CAGCAGCTAGAAGTGCTGAA+TGG | 0.585525 | 1_3:+14163002 | None:intergenic |
| GCTATTGAACTTGAAGAGGC+CGG | 0.585806 | 1_3:-14163484 | Msa0105600:CDS |
| TTAGTAGAATAGTATCTGAA+GGG | 0.587830 | 1_3:-14163159 | Msa0105600:CDS |
| GCAAAGAGAGGGAGTTTGGA+GGG | 0.589171 | 1_3:+14168790 | None:intergenic |
| CTGCTTCAACCATGATGTCA+TGG | 0.590843 | 1_3:+14167368 | None:intergenic |
| ATAATTGGTTATCAATGATG+AGG | 0.593044 | 1_3:-14162685 | Msa0105600:three_prime_UTR |
| CAATAGCACCAACACGAACA+AGG | 0.593972 | 1_3:+14165842 | None:intergenic |
| GCAGCACCTATTAATGGCAC+AGG | 0.594699 | 1_3:+14166057 | None:intergenic |
| AAAGTGAAGGAAGCTGCAGC+GGG | 0.596369 | 1_3:-14167424 | Msa0105600:CDS |
| TATGAAGTACCTTGATGATG+AGG | 0.596634 | 1_3:-14167452 | Msa0105600:CDS |
| GAAAGTGAAGGAAGCTGCAG+CGG | 0.599166 | 1_3:-14167425 | Msa0105600:CDS |
| TAAAGGAGCTAAACCACCCT+CGG | 0.600173 | 1_3:+14164786 | None:intergenic |
| TGCATTGCTAGAACTTGTGA+AGG | 0.603172 | 1_3:-14166121 | Msa0105600:CDS |
| TTCCGAAATAATAGCTCCTG+TGG | 0.603640 | 1_3:+14163126 | None:intergenic |
| CGAGTGAACCTGGCAAAGAG+AGG | 0.604709 | 1_3:+14168778 | None:intergenic |
| TGGAGCCGATGATGGATCAA+AGG | 0.607714 | 1_3:-14164203 | Msa0105600:CDS |
| TTCAGCACTTCTAGCTGCTG+GGG | 0.609035 | 1_3:-14162999 | Msa0105600:CDS |
| AACTAGATTCTGCTCTAAGG+AGG | 0.611088 | 1_3:+14167785 | None:intergenic |
| TGGAAACATGACGAGTCCAT+GGG | 0.614382 | 1_3:-14162901 | Msa0105600:exon |
| ACCCAATCTTTGCTGCGGAG+GGG | 0.616154 | 1_3:+14163340 | None:intergenic |
| CGAGTGATTGAAACCGAGGG+TGG | 0.618745 | 1_3:-14164799 | Msa0105600:CDS |
| TGAAGTGCCCTTTGCCACTG+TGG | 0.620491 | 1_3:+14162938 | None:intergenic |
| TCCAGTTCCAGACCCTTCGT+CGG | 0.620551 | 1_3:+14168991 | None:intergenic |
| GAAATGAGAAGTGTTAAGGT+TGG | 0.621861 | 1_3:+14168879 | None:intergenic |
| AAGTCATTAGAAAGGAAGCA+AGG | 0.621933 | 1_3:-14166146 | Msa0105600:CDS |
| GCCTAGCATACGAACAAACA+AGG | 0.626275 | 1_3:+14167930 | None:intergenic |
| TTGAAGATAGTGATTGCAGA+AGG | 0.627279 | 1_3:+14167740 | None:intergenic |
| GAGTGAACCTGGCAAAGAGA+GGG | 0.627352 | 1_3:+14168779 | None:intergenic |
| TTATACGTATGCAGCAGAGA+CGG | 0.627719 | 1_3:-14163542 | Msa0105600:intron |
| TGCCGAGTGATTGAAACCGA+GGG | 0.634638 | 1_3:-14164802 | Msa0105600:CDS |
| GAGGCGCCTGCATTTCCAGA+TGG | 0.635163 | 1_3:-14166003 | Msa0105600:CDS |
| GAGCGTGTCAATGAAATGGG+AGG | 0.636528 | 1_3:+14163387 | None:intergenic |
| AGCGTGTCAATGAAATGGGA+GGG | 0.637506 | 1_3:+14163388 | None:intergenic |
| CAGATGGCACAGAAATCGAA+AGG | 0.639899 | 1_3:-14165987 | Msa0105600:CDS |
| CAGCTACCCAATCTTTGCTG+CGG | 0.649246 | 1_3:+14163335 | None:intergenic |
| CACAAACTCAAGAACAGATG+CGG | 0.650980 | 1_3:+14163889 | None:intergenic |
| TAGTAGAATAGTATCTGAAG+GGG | 0.655599 | 1_3:-14163158 | Msa0105600:CDS |
| CCGTATCGAAAACAAACCCA+AGG | 0.657158 | 1_3:-14164159 | Msa0105600:intron |
| AGCAGAGACGGAATCTGACG+TGG | 0.660348 | 1_3:-14163530 | Msa0105600:CDS |
| AACATGACGAGTCCATGGGA+AGG | 0.664260 | 1_3:-14162897 | Msa0105600:exon |
| CAATGCAAGAGTGTCAGACG+CGG | 0.664864 | 1_3:+14165775 | None:intergenic |
| TTGCCGAGTGATTGAAACCG+AGG | 0.671670 | 1_3:-14164803 | Msa0105600:CDS |
| TGATGAGGATATGAAAGTGA+AGG | 0.675412 | 1_3:-14167437 | Msa0105600:CDS |
| ACAACAAGATTAATACAACC+AGG | 0.686889 | 1_3:+14167811 | None:intergenic |
| CAGGCGCCTCGTATAAACGT+GGG | 0.689019 | 1_3:+14166016 | None:intergenic |
| TGACTTTGGTGATAGCTACG+TGG | 0.692051 | 1_3:-14167953 | Msa0105600:CDS |
| GCAGGCGCCTCGTATAAACG+TGG | 0.692382 | 1_3:+14166015 | None:intergenic |
| AGGACTTCAAAATCTCCACA+AGG | 0.708917 | 1_3:+14163936 | None:intergenic |
| ATACAACCCACGTTTATACG+AGG | 0.715558 | 1_3:-14166022 | Msa0105600:CDS |
| TTGCAATATCTGCAGCATCG+CGG | 0.740478 | 1_3:-14163459 | Msa0105600:CDS |
| TATGCGTATTGCATTCAAGG+AGG | 0.753564 | 1_3:-14165650 | Msa0105600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATTTCATATAAATAA+AGG | - | chr1_3:14165091-14165110 | Msa0105600:intron | 10.0% |
| !!! | GTTCAAAATATATTTTTTTA+GGG | + | chr1_3:14165143-14165162 | None:intergenic | 10.0% |
| !!! | AGTTCAAAATATATTTTTTT+AGG | + | chr1_3:14165144-14165163 | None:intergenic | 10.0% |
| !! | AAAAAAATGAAATTCTAAAT+AGG | + | chr1_3:14167296-14167315 | None:intergenic | 10.0% |
| !!! | TTGTCTAAAATATTATAATG+TGG | - | chr1_3:14163452-14163471 | Msa0105600:CDS | 15.0% |
| !! | TAATTAGTATACAAAAACTT+TGG | - | chr1_3:14163975-14163994 | Msa0105600:intron | 15.0% |
| !! | TATATCAAGAATTATAAAAC+TGG | + | chr1_3:14164317-14164336 | None:intergenic | 15.0% |
| !!! | AAATTATATGGTTCTAATTA+GGG | - | chr1_3:14164722-14164741 | Msa0105600:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr1_3:14167015-14167034 | Msa0105600:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr1_3:14167016-14167035 | Msa0105600:intron | 15.0% |
| !!! | ACTTAACAAGATTTTAATTT+TGG | - | chr1_3:14167177-14167196 | Msa0105600:intron | 15.0% |
| !! | TGTGAAATTAAGAAAATGAA+GGG | + | chr1_3:14162913-14162932 | None:intergenic | 20.0% |
| !! | CATATTATGATTTACAATAG+TGG | + | chr1_3:14163074-14163093 | None:intergenic | 20.0% |
| !! | GTAAATCATAATATGTTCAT+TGG | - | chr1_3:14163079-14163098 | Msa0105600:CDS | 20.0% |
| !!! | GAAATTATATGGTTCTAATT+AGG | - | chr1_3:14164721-14164740 | Msa0105600:intron | 20.0% |
| !!! | TAAATTATGTATGCTTTGAA+TGG | - | chr1_3:14164951-14164970 | Msa0105600:intron | 20.0% |
| !! | AAGAGACAAATATAAACTTA+GGG | + | chr1_3:14165066-14165085 | None:intergenic | 20.0% |
| !! | AAAGAGACAAATATAAACTT+AGG | + | chr1_3:14165067-14165086 | None:intergenic | 20.0% |
| !!! | ATGAGTTTTTATCTTAATTC+AGG | - | chr1_3:14165394-14165413 | Msa0105600:intron | 20.0% |
| !! | TATAACAAACCTTCTAAATT+TGG | - | chr1_3:14165635-14165654 | Msa0105600:CDS | 20.0% |
| !!! | TACAACAATAGAGTATATTT+TGG | - | chr1_3:14166116-14166135 | Msa0105600:CDS | 20.0% |
| !!! | ATGAAAGAAAGTACTTTATA+AGG | + | chr1_3:14166161-14166180 | None:intergenic | 20.0% |
| !! | CATTGTAAACAGAAAAATTA+AGG | - | chr1_3:14166178-14166197 | Msa0105600:CDS | 20.0% |
| !! | AGAAACAATTGTACATATAA+CGG | - | chr1_3:14166449-14166468 | Msa0105600:intron | 20.0% |
| !! | AAGGGATATTATACAAATTA+AGG | - | chr1_3:14166475-14166494 | Msa0105600:intron | 20.0% |
| !!! | ATGTTTTGGAAAATGAAATA+GGG | - | chr1_3:14166642-14166661 | Msa0105600:intron | 20.0% |
| !!! | CGTTTTAAAATACTAACTAA+AGG | + | chr1_3:14166830-14166849 | None:intergenic | 20.0% |
| !!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr1_3:14166950-14166969 | Msa0105600:intron | 20.0% |
| !!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr1_3:14166951-14166970 | Msa0105600:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr1_3:14166975-14166994 | Msa0105600:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr1_3:14167048-14167067 | Msa0105600:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr1_3:14167049-14167068 | Msa0105600:intron | 20.0% |
| !! | TAAACATTGTAAAACGAAAA+TGG | + | chr1_3:14167863-14167882 | None:intergenic | 20.0% |
| !! | AATACTGTATAATCTTAGTA+TGG | - | chr1_3:14168561-14168580 | Msa0105600:intron | 20.0% |
| !!! | CAAAATACCTTTTACAAATA+AGG | + | chr1_3:14168791-14168810 | None:intergenic | 20.0% |
| ! | GTGTGAAATTAAGAAAATGA+AGG | + | chr1_3:14162914-14162933 | None:intergenic | 25.0% |
| ! | AGTGTTATGTTATGTTTAAC+TGG | - | chr1_3:14163147-14163166 | Msa0105600:CDS | 25.0% |
| ! | AACAAGCTATAATTACTCTT+TGG | - | chr1_3:14163714-14163733 | Msa0105600:intron | 25.0% |
| ! | TTAAACTACTATACATAAGC+AGG | + | chr1_3:14164538-14164557 | None:intergenic | 25.0% |
| ! | GGAACGTATCAAAATAAATT+TGG | + | chr1_3:14164596-14164615 | None:intergenic | 25.0% |
| ! | AACATTTCTGTTGAGATTTA+GGG | + | chr1_3:14165205-14165224 | None:intergenic | 25.0% |
| ! | TAACATTTCTGTTGAGATTT+AGG | + | chr1_3:14165206-14165225 | None:intergenic | 25.0% |
| !!! | CAGAATGTCATTATTTCTAA+TGG | + | chr1_3:14165267-14165286 | None:intergenic | 25.0% |
| !! | GTTTACTGATATTTTTCCTT+TGG | - | chr1_3:14165289-14165308 | Msa0105600:intron | 25.0% |
| ! | TCAGTAAAATTCAATACCAA+AGG | + | chr1_3:14165308-14165327 | None:intergenic | 25.0% |
| !! | GATAAAAACTCATCACATTT+TGG | + | chr1_3:14165387-14165406 | None:intergenic | 25.0% |
| !!! | TTACAGAATTCTTGTTATTG+AGG | - | chr1_3:14165505-14165524 | Msa0105600:intron | 25.0% |
| ! | ATAAGAAATTATCAGTTGAC+AGG | - | chr1_3:14166252-14166271 | Msa0105600:intron | 25.0% |
| ! | TAAGAAATTATCAGTTGACA+GGG | - | chr1_3:14166253-14166272 | Msa0105600:intron | 25.0% |
| !!! | TTTCCTTATTTTGTGGTTTT+AGG | + | chr1_3:14166406-14166425 | None:intergenic | 25.0% |
| !! | ATTGTACATATAACGGAAAA+AGG | - | chr1_3:14166456-14166475 | Msa0105600:intron | 25.0% |
| !! | TTGTACATATAACGGAAAAA+GGG | - | chr1_3:14166457-14166476 | Msa0105600:intron | 25.0% |
| ! | GAAAATACAAACTTACCATA+GGG | + | chr1_3:14166550-14166569 | None:intergenic | 25.0% |
| ! | AGAAAATACAAACTTACCAT+AGG | + | chr1_3:14166551-14166570 | None:intergenic | 25.0% |
| ! | AAATGAAAAGAAGAAGATAG+AGG | - | chr1_3:14166592-14166611 | Msa0105600:intron | 25.0% |
| ! | AATGAAAAGAAGAAGATAGA+GGG | - | chr1_3:14166593-14166612 | Msa0105600:intron | 25.0% |
| !!! | GATGTTTTGGAAAATGAAAT+AGG | - | chr1_3:14166641-14166660 | Msa0105600:intron | 25.0% |
| ! | TATGCTATGAATTGCTAAAA+TGG | - | chr1_3:14166700-14166719 | Msa0105600:intron | 25.0% |
| !! | AGAAAAGTGTATAAATGAAG+GGG | - | chr1_3:14166952-14166971 | Msa0105600:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr1_3:14166974-14166993 | Msa0105600:intron | 25.0% |
| ! | GAGTATATGTTAACTAATTC+TGG | - | chr1_3:14167129-14167148 | Msa0105600:intron | 25.0% |
| ! | GCAAAAGCTAAAATATAAAC+TGG | - | chr1_3:14167151-14167170 | Msa0105600:intron | 25.0% |
| ! | TTTAACTGCATCTCTTTATT+GGG | + | chr1_3:14167251-14167270 | None:intergenic | 25.0% |
| !!! | GATTCTTTTCAGTTTTATGA+TGG | - | chr1_3:14167340-14167359 | Msa0105600:intron | 25.0% |
| ! | TTCATCTATATACAGTTACA+AGG | - | chr1_3:14167511-14167530 | Msa0105600:CDS | 25.0% |
| ! | CTGAAAAGTTTAGTTAACAT+TGG | - | chr1_3:14167577-14167596 | Msa0105600:intron | 25.0% |
| ! | TTTCTCTTCAATAAAACATC+AGG | - | chr1_3:14167605-14167624 | Msa0105600:intron | 25.0% |
| ! | TCAATATCCACAGAAATAAT+CGG | + | chr1_3:14167757-14167776 | None:intergenic | 25.0% |
| ! | ATTTCTGTGGATATTGAAAA+TGG | - | chr1_3:14167760-14167779 | Msa0105600:CDS | 25.0% |
| ! | GCAAAATCTCTTGAAAATTT+CGG | - | chr1_3:14167801-14167820 | Msa0105600:CDS | 25.0% |
| ! | CAAAATCTCTTGAAAATTTC+GGG | - | chr1_3:14167802-14167821 | Msa0105600:CDS | 25.0% |
| ! | ATAGAGAACTTAGTTTAACT+AGG | + | chr1_3:14168291-14168310 | None:intergenic | 25.0% |
| ! | TTAGTAGAATAGTATCTGAA+GGG | - | chr1_3:14168437-14168456 | Msa0105600:intron | 25.0% |
| !! | TTGGTTATGTATCTTAGTTT+TGG | - | chr1_3:14168828-14168847 | Msa0105600:CDS | 25.0% |
| !!! | TGGTTATGTATCTTAGTTTT+GGG | - | chr1_3:14168829-14168848 | Msa0105600:CDS | 25.0% |
| ! | AACTCGAGAAATTCTATAAT+TGG | - | chr1_3:14168896-14168915 | Msa0105600:CDS | 25.0% |
| ! | ATAATTGGTTATCAATGATG+AGG | - | chr1_3:14168911-14168930 | Msa0105600:CDS | 25.0% |
| ! | ATTGTTGTTGTTGTTGTTGA+GGG | + | chr1_3:14162746-14162765 | None:intergenic | 30.0% |
| ! | TATTGTTGTTGTTGTTGTTG+AGG | + | chr1_3:14162747-14162766 | None:intergenic | 30.0% |
| TCAAATAAGTCAATCCAAAC+AGG | + | chr1_3:14163211-14163230 | None:intergenic | 30.0% | |
| !!! | AAGCTTTAAGTTGTTTTCGT+AGG | + | chr1_3:14163348-14163367 | None:intergenic | 30.0% |
| ! | AATGCTTGAATTTTGCTTTC+AGG | - | chr1_3:14163589-14163608 | Msa0105600:intron | 30.0% |
| AGGAAATAGATGAAGTAGAA+GGG | - | chr1_3:14163609-14163628 | Msa0105600:intron | 30.0% | |
| GACAATATAATGCAATTTCC+TGG | - | chr1_3:14163767-14163786 | Msa0105600:intron | 30.0% | |
| ACAACAAGATTAATACAACC+AGG | + | chr1_3:14163788-14163807 | None:intergenic | 30.0% | |
| TATCTTCAATCGACCAATAT+AGG | - | chr1_3:14163870-14163889 | Msa0105600:CDS | 30.0% | |
| GTGTGTAGAAAATGAACATT+TGG | - | chr1_3:14164014-14164033 | Msa0105600:intron | 30.0% | |
| ! | TTTCAATGTCTCACCAATTT+TGG | + | chr1_3:14164262-14164281 | None:intergenic | 30.0% |
| AGGTGCAAACACATAAATTA+TGG | + | chr1_3:14164385-14164404 | None:intergenic | 30.0% | |
| TTTGATGTTGTATAAAAGCC+TGG | - | chr1_3:14164437-14164456 | Msa0105600:intron | 30.0% | |
| !!! | GAACTTGGCAGTTTTTTTTT+TGG | - | chr1_3:14164479-14164498 | Msa0105600:intron | 30.0% |
| ACGTTCCTATAGAAAATACA+AGG | - | chr1_3:14164609-14164628 | Msa0105600:intron | 30.0% | |
| ! | TGGATCCTTGTATTTTCTAT+AGG | + | chr1_3:14164617-14164636 | None:intergenic | 30.0% |
| GAGGCAATGTTGAAATTATA+TGG | - | chr1_3:14164710-14164729 | Msa0105600:intron | 30.0% | |
| !! | TATATGGTTCTAATTAGGGA+AGG | - | chr1_3:14164726-14164745 | Msa0105600:intron | 30.0% |
| AGGAGGAAAAAAGATAGTTA+AGG | - | chr1_3:14164746-14164765 | Msa0105600:CDS | 30.0% | |
| !! | ATTTTTAAGCTTGTGCAGTT+GGG | + | chr1_3:14164808-14164827 | None:intergenic | 30.0% |
| ! | AGTATCGTGGATAATCTTTT+AGG | + | chr1_3:14164849-14164868 | None:intergenic | 30.0% |
| !! | ATCTTCAGAATAAAGTATCG+TGG | + | chr1_3:14164862-14164881 | None:intergenic | 30.0% |
| ATCGATACTCTAATGAAGTT+TGG | - | chr1_3:14164893-14164912 | Msa0105600:intron | 30.0% | |
| ! | ATTATGTATGCTTTGAATGG+AGG | - | chr1_3:14164954-14164973 | Msa0105600:intron | 30.0% |
| ! | TTATGTATGCTTTGAATGGA+GGG | - | chr1_3:14164955-14164974 | Msa0105600:intron | 30.0% |
| TTTCCATTCAACTTATCAGA+AGG | + | chr1_3:14165238-14165257 | None:intergenic | 30.0% | |
| ! | TCTGATAAGTTGAATGGAAA+AGG | - | chr1_3:14165238-14165257 | Msa0105600:intron | 30.0% |
| ATTCTCATAGTTCTTACCAA+AGG | - | chr1_3:14165335-14165354 | Msa0105600:intron | 30.0% | |
| TCTAATGACTTTAGATGCTT+CGG | + | chr1_3:14165441-14165460 | None:intergenic | 30.0% | |
| ! | AGCATCTAAAGTCATTAGAA+AGG | - | chr1_3:14165442-14165461 | Msa0105600:intron | 30.0% |
| !! | AGAATTCTTGTTATTGAGGA+AGG | - | chr1_3:14165509-14165528 | Msa0105600:intron | 30.0% |
| GCAAAAGTCAATGCAATTAT+TGG | - | chr1_3:14165713-14165732 | Msa0105600:CDS | 30.0% | |
| TGTCCTAAAACCACAAAATA+AGG | - | chr1_3:14166400-14166419 | Msa0105600:intron | 30.0% | |
| !!! | GGATTCATTTCCTTATTTTG+TGG | + | chr1_3:14166413-14166432 | None:intergenic | 30.0% |
| TGAATCCTATTCCAGAATTA+AGG | - | chr1_3:14166426-14166445 | Msa0105600:intron | 30.0% | |
| !! | TTTCTCCTTAATTCTGGAAT+AGG | + | chr1_3:14166434-14166453 | None:intergenic | 30.0% |
| ! | CAATTGTTTCTCCTTAATTC+TGG | + | chr1_3:14166440-14166459 | None:intergenic | 30.0% |
| AGTATCATTTAGATGGTGAA+AGG | - | chr1_3:14166520-14166539 | Msa0105600:intron | 30.0% | |
| TTTGGAAAATGAAATAGGGA+TGG | - | chr1_3:14166646-14166665 | Msa0105600:intron | 30.0% | |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr1_3:14167062-14167081 | Msa0105600:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr1_3:14167063-14167082 | Msa0105600:intron | 30.0% |
| AGAAAATGAGTCAGTTATTC+CGG | - | chr1_3:14167098-14167117 | Msa0105600:intron | 30.0% | |
| CTTTAACTGCATCTCTTTAT+TGG | + | chr1_3:14167252-14167271 | None:intergenic | 30.0% | |
| CAATAAAGAGATGCAGTTAA+AGG | - | chr1_3:14167250-14167269 | Msa0105600:intron | 30.0% | |
| ACCAGTTAATGAATCTAAGA+AGG | - | chr1_3:14167363-14167382 | Msa0105600:CDS | 30.0% | |
| !! | AATGAATCTAAGAAGGCATT+TGG | - | chr1_3:14167370-14167389 | Msa0105600:CDS | 30.0% |
| TAATTCCTTTGATCCATCAT+CGG | + | chr1_3:14167401-14167420 | None:intergenic | 30.0% | |
| !! | ATATCCTTTTAGCTAACCTT+GGG | + | chr1_3:14167456-14167475 | None:intergenic | 30.0% |
| TAAAAGGATATGAACCACAA+GGG | - | chr1_3:14167465-14167484 | Msa0105600:CDS | 30.0% | |
| AAATTCTGCTCTTTAATGTG+TGG | - | chr1_3:14167830-14167849 | Msa0105600:CDS | 30.0% | |
| ! | TGATTTTTGCTAGTGGAAAA+AGG | - | chr1_3:14167944-14167963 | Msa0105600:CDS | 30.0% |
| ATATGCTATTGAACTTGAAG+AGG | - | chr1_3:14168108-14168127 | Msa0105600:intron | 30.0% | |
| GTTAAACTAAGTTCTCTATC+TGG | - | chr1_3:14168292-14168311 | Msa0105600:intron | 30.0% | |
| CTTAGTAGAATAGTATCTGA+AGG | - | chr1_3:14168436-14168455 | Msa0105600:intron | 30.0% | |
| TAGTAGAATAGTATCTGAAG+GGG | - | chr1_3:14168438-14168457 | Msa0105600:intron | 30.0% | |
| TGACAGAACAATTCTTCTTA+AGG | + | chr1_3:14168632-14168651 | None:intergenic | 30.0% | |
| TATGTTTAGAAGAACATCCT+TGG | - | chr1_3:14168764-14168783 | Msa0105600:CDS | 30.0% | |
| !!! | AGGTATTTTGATTCTACTAG+TGG | - | chr1_3:14168801-14168820 | Msa0105600:CDS | 30.0% |
| !! | GAAATGAGAAGTGTTAAGGT+TGG | + | chr1_3:14162720-14162739 | None:intergenic | 35.0% |
| AGGGTTGAGATTAAAACTCA+CGG | + | chr1_3:14162894-14162913 | None:intergenic | 35.0% | |
| AGAAGTGATTCAGTTATGGA+AGG | + | chr1_3:14162983-14163002 | None:intergenic | 35.0% | |
| CAAGAGAAGTGATTCAGTTA+TGG | + | chr1_3:14162987-14163006 | None:intergenic | 35.0% | |
| ! | CTGGATTCAGTTCTAATGTA+TGG | - | chr1_3:14163166-14163185 | Msa0105600:CDS | 35.0% |
| CAGGAAATAGATGAAGTAGA+AGG | - | chr1_3:14163608-14163627 | Msa0105600:intron | 35.0% | |
| GGAAATAGATGAAGTAGAAG+GGG | - | chr1_3:14163610-14163629 | Msa0105600:intron | 35.0% | |
| TATCAAGTGGATCATGATCT+AGG | + | chr1_3:14163691-14163710 | None:intergenic | 35.0% | |
| !! | ATAGCTTGTTCTCTATCAAG+TGG | + | chr1_3:14163704-14163723 | None:intergenic | 35.0% |
| ACTCTTTGGCAATATTCACT+TGG | - | chr1_3:14163728-14163747 | Msa0105600:intron | 35.0% | |
| TTGAAGATAGTGATTGCAGA+AGG | + | chr1_3:14163859-14163878 | None:intergenic | 35.0% | |
| CTGCTACAGAATTCCTATAT+TGG | + | chr1_3:14163886-14163905 | None:intergenic | 35.0% | |
| !!! | CATTTGGAACTCTTTTTTGC+AGG | - | chr1_3:14164030-14164049 | Msa0105600:intron | 35.0% |
| !!! | GAACTCTTTTTTGCAGGTAA+AGG | - | chr1_3:14164036-14164055 | Msa0105600:intron | 35.0% |
| ! | CGCTCTTTGCAATTTTTACT+CGG | + | chr1_3:14164108-14164127 | None:intergenic | 35.0% |
| !! | TATGAAGTACCTTGATGATG+AGG | - | chr1_3:14164144-14164163 | Msa0105600:intron | 35.0% |
| CTTTCATATCCTCATCATCA+AGG | + | chr1_3:14164156-14164175 | None:intergenic | 35.0% | |
| TGATGAGGATATGAAAGTGA+AGG | - | chr1_3:14164159-14164178 | Msa0105600:intron | 35.0% | |
| !! | AGCAGGTGTTATTCCAAAAT+TGG | - | chr1_3:14164246-14164265 | Msa0105600:CDS | 35.0% |
| ATTGGTGAGACATTGAAAGA+TGG | - | chr1_3:14164264-14164283 | Msa0105600:intron | 35.0% | |
| CACCTAAAACATTATGCTCT+CGG | - | chr1_3:14164400-14164419 | Msa0105600:intron | 35.0% | |
| ACCTAAAACATTATGCTCTC+GGG | - | chr1_3:14164401-14164420 | Msa0105600:intron | 35.0% | |
| !!! | TGGCAGTTTTTTTTTTGGAG+AGG | - | chr1_3:14164484-14164503 | Msa0105600:intron | 35.0% |
| !!! | GGCAGTTTTTTTTTTGGAGA+GGG | - | chr1_3:14164485-14164504 | Msa0105600:intron | 35.0% |
| ACATAAGCTACCTTCTATAG+TGG | - | chr1_3:14164512-14164531 | Msa0105600:intron | 35.0% | |
| GAATCATGAGTCAATCTTCT+TGG | + | chr1_3:14164637-14164656 | None:intergenic | 35.0% | |
| ACTCATGATTCTATGCAAGT+TGG | - | chr1_3:14164646-14164665 | Msa0105600:intron | 35.0% | |
| GAGTCTATTTGGTCTATTCA+TGG | - | chr1_3:14164672-14164691 | Msa0105600:intron | 35.0% | |
| ! | GTTAAGGCTAATTTTGTGCA+AGG | - | chr1_3:14164762-14164781 | Msa0105600:CDS | 35.0% |
| !! | GATTTTTAAGCTTGTGCAGT+TGG | + | chr1_3:14164809-14164828 | None:intergenic | 35.0% |
| ! | TATGTATGCTTTGAATGGAG+GGG | - | chr1_3:14164956-14164975 | Msa0105600:intron | 35.0% |
| TTCTGTTGAGATTTAGGGAT+CGG | + | chr1_3:14165200-14165219 | None:intergenic | 35.0% | |
| ! | TGTTCTAAGCATCAAGAGAA+AGG | + | chr1_3:14165362-14165381 | None:intergenic | 35.0% |
| AAGTCATTAGAAAGGAAGCA+AGG | - | chr1_3:14165450-14165469 | Msa0105600:intron | 35.0% | |
| ! | TTAGTTCCTGTGCCATTAAT+AGG | - | chr1_3:14165533-14165552 | Msa0105600:intron | 35.0% |
| ACATATGCGTATTGCATTCA+AGG | - | chr1_3:14165943-14165962 | Msa0105600:CDS | 35.0% | |
| !! | GATAACCATTCTAGGGTTAA+GGG | - | chr1_3:14166367-14166386 | Msa0105600:intron | 35.0% |
| TATTTCCCTTAACCCTAGAA+TGG | + | chr1_3:14166375-14166394 | None:intergenic | 35.0% | |
| GTACAGCAGTATCATTTAGA+TGG | - | chr1_3:14166513-14166532 | Msa0105600:intron | 35.0% | |
| AAGCCAACCATTGCATAATA+CGG | - | chr1_3:14166616-14166635 | Msa0105600:intron | 35.0% | |
| ACATCATCCGTATTATGCAA+TGG | + | chr1_3:14166626-14166645 | None:intergenic | 35.0% | |
| ! | GCATAATACGGATGATGTTT+TGG | - | chr1_3:14166628-14166647 | Msa0105600:intron | 35.0% |
| CAAAGTAGGTCAATTATACC+GGG | + | chr1_3:14166915-14166934 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr1_3:14166916-14166935 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr1_3:14166929-14166948 | None:intergenic | 35.0% | |
| TGTATAAATGAAGGGGAAAG+TGG | - | chr1_3:14166959-14166978 | Msa0105600:intron | 35.0% | |
| GAAAATGAGTCAGTTATTCC+GGG | - | chr1_3:14167099-14167118 | Msa0105600:intron | 35.0% | |
| GCCTTCTTAGATTCATTAAC+TGG | + | chr1_3:14167367-14167386 | None:intergenic | 35.0% | |
| !! | CATATCCTTTTAGCTAACCT+TGG | + | chr1_3:14167457-14167476 | None:intergenic | 35.0% |
| CTAAAAGGATATGAACCACA+AGG | - | chr1_3:14167464-14167483 | Msa0105600:CDS | 35.0% | |
| CAAAAAAACCTATACCCTTG+TGG | + | chr1_3:14167482-14167501 | None:intergenic | 35.0% | |
| TTCTTGTAAACTGGCTAAAG+AGG | + | chr1_3:14167683-14167702 | None:intergenic | 35.0% | |
| TATCCCTTTCAATTTGAGTG+TGG | - | chr1_3:14167921-14167940 | Msa0105600:CDS | 35.0% | |
| TCACCACACTCAAATTGAAA+GGG | + | chr1_3:14167927-14167946 | None:intergenic | 35.0% | |
| ATCACCACACTCAAATTGAA+AGG | + | chr1_3:14167928-14167947 | None:intergenic | 35.0% | |
| ! | TATGGGACTTGAGAATTTTG+CGG | + | chr1_3:14168234-14168253 | None:intergenic | 35.0% |
| AGTGTAACTTCTACGTTGAT+CGG | + | chr1_3:14168337-14168356 | None:intergenic | 35.0% | |
| TTGATCTGTTCTACAAGTCT+TGG | + | chr1_3:14168373-14168392 | None:intergenic | 35.0% | |
| ! | TTCATTCTCTTTAGAAGCAC+AGG | - | chr1_3:14168396-14168415 | Msa0105600:intron | 35.0% |
| TTCCACAGGAGCTATTATTT+CGG | - | chr1_3:14168468-14168487 | Msa0105600:intron | 35.0% | |
| ATTGAAGAAGGTAGTGAAAG+AGG | - | chr1_3:14168520-14168539 | Msa0105600:intron | 35.0% | |
| GAACAATTCTTCTTAAGGCT+GGG | + | chr1_3:14168627-14168646 | None:intergenic | 35.0% | |
| AGAACAATTCTTCTTAAGGC+TGG | + | chr1_3:14168628-14168647 | None:intergenic | 35.0% | |
| TGTTTAAAGATTCCTTCCCA+TGG | + | chr1_3:14168714-14168733 | None:intergenic | 35.0% | |
| ! | CCTTTTACAAATAAGGACCA+AGG | + | chr1_3:14168784-14168803 | None:intergenic | 35.0% |
| ! | CCTTGGTCCTTATTTGTAAA+AGG | - | chr1_3:14168781-14168800 | Msa0105600:CDS | 35.0% |
| !! | TGATTCTACTAGTGGATTCT+TGG | - | chr1_3:14168809-14168828 | Msa0105600:CDS | 35.0% |
| AGCAAGTTACATCTTTGTAC+CGG | - | chr1_3:14168996-14169015 | Msa0105600:five_prime_UTR | 35.0% | |
| !!! | CTATCTTGTTTTCCGACGAA+GGG | - | chr1_3:14162593-14162612 | Msa0105600:three_prime_UTR | 40.0% |
| !! | ATGAGAAGTGTTAAGGTTGG+AGG | + | chr1_3:14162717-14162736 | None:intergenic | 40.0% |
| ACTCGTAGTTGCACCAATAA+CGG | - | chr1_3:14162836-14162855 | Msa0105600:three_prime_UTR | 40.0% | |
| GTGATCAGAATGACCGTTAT+TGG | + | chr1_3:14162852-14162871 | None:intergenic | 40.0% | |
| GTTGAGATTAAAACTCACGG+GGG | + | chr1_3:14162891-14162910 | None:intergenic | 40.0% | |
| GGTTGAGATTAAAACTCACG+GGG | + | chr1_3:14162892-14162911 | None:intergenic | 40.0% | |
| GGGTTGAGATTAAAACTCAC+GGG | + | chr1_3:14162893-14162912 | None:intergenic | 40.0% | |
| AACTGAACTGAAGCAAAAGG+TGG | + | chr1_3:14162950-14162969 | None:intergenic | 40.0% | |
| CTGAACTGAACTGAAGCAAA+AGG | + | chr1_3:14162953-14162972 | None:intergenic | 40.0% | |
| !! | TATGGTATGCTCGCTGTTTT+AGG | - | chr1_3:14163184-14163203 | Msa0105600:CDS | 40.0% |
| !! | ATGGTATGCTCGCTGTTTTA+GGG | - | chr1_3:14163185-14163204 | Msa0105600:CDS | 40.0% |
| !! | GTTGTTTTCGTAGGCTATCT+TGG | + | chr1_3:14163339-14163358 | None:intergenic | 40.0% |
| TGGTATTGTGAACAAACAGC+AGG | - | chr1_3:14163472-14163491 | Msa0105600:CDS | 40.0% | |
| GGTATTGTGAACAAACAGCA+GGG | - | chr1_3:14163473-14163492 | Msa0105600:CDS | 40.0% | |
| GACTTGAGTTTAGGCAACTA+TGG | - | chr1_3:14163495-14163514 | Msa0105600:CDS | 40.0% | |
| GTTTAGGCAACTATGGAGAT+AGG | - | chr1_3:14163502-14163521 | Msa0105600:CDS | 40.0% | |
| !!! | GGTTTTTTTGTTAGCCTCTG+TGG | - | chr1_3:14163523-14163542 | Msa0105600:CDS | 40.0% |
| TAAACACAGACAAACCACAG+AGG | + | chr1_3:14163540-14163559 | None:intergenic | 40.0% | |
| CTTTGGCAATATTCACTTGG+TGG | - | chr1_3:14163731-14163750 | Msa0105600:intron | 40.0% | |
| !! | AACTAGATTCTGCTCTAAGG+AGG | + | chr1_3:14163814-14163833 | None:intergenic | 40.0% |
| CCTTAGAGCAGAATCTAGTT+CGG | - | chr1_3:14163814-14163833 | Msa0105600:CDS | 40.0% | |
| AGGAATTCTGTAGCAGATAG+TGG | - | chr1_3:14163890-14163909 | Msa0105600:CDS | 40.0% | |
| ATTGCTGACACAATCATCCT+TGG | - | chr1_3:14163934-14163953 | Msa0105600:CDS | 40.0% | |
| CCATGATGTCATGGTTAACA+TGG | + | chr1_3:14164222-14164241 | None:intergenic | 40.0% | |
| CCATGTTAACCATGACATCA+TGG | - | chr1_3:14164219-14164238 | Msa0105600:CDS | 40.0% | |
| !! | TCCCGAGAGCATAATGTTTT+AGG | + | chr1_3:14164405-14164424 | None:intergenic | 40.0% |
| ! | CAAGTTGGAACGAGTCTATT+TGG | - | chr1_3:14164661-14164680 | Msa0105600:intron | 40.0% |
| ! | ATGGTAGTGCTTTGACTTTG+AGG | - | chr1_3:14164691-14164710 | Msa0105600:intron | 40.0% |
| !! | ATGGTTCTAATTAGGGAAGG+AGG | - | chr1_3:14164729-14164748 | Msa0105600:intron | 40.0% |
| ! | ATGTATGCTTTGAATGGAGG+GGG | - | chr1_3:14164957-14164976 | Msa0105600:intron | 40.0% |
| GATTAATACTGAAGCCTTCC+TGG | - | chr1_3:14165014-14165033 | Msa0105600:intron | 40.0% | |
| AACTAGAACCTTTGTTGACC+AGG | + | chr1_3:14165035-14165054 | None:intergenic | 40.0% | |
| ! | GTGCCTTCTGATAAGTTGAA+TGG | - | chr1_3:14165232-14165251 | Msa0105600:intron | 40.0% |
| TTAGATGCTTCGGAGTCATA+TGG | + | chr1_3:14165431-14165450 | None:intergenic | 40.0% | |
| TGCATTGCTAGAACTTGTGA+AGG | - | chr1_3:14165475-14165494 | Msa0105600:intron | 40.0% | |
| ! | ACGTGGGTTGTATGACTTAT+AGG | + | chr1_3:14165567-14165586 | None:intergenic | 40.0% |
| ATACAACCCACGTTTATACG+AGG | - | chr1_3:14165574-14165593 | Msa0105600:CDS | 40.0% | |
| TCTGATGCGCCAAATTTAGA+AGG | + | chr1_3:14165647-14165666 | None:intergenic | 40.0% | |
| CAACAATTCCTTGTTCGTGT+TGG | - | chr1_3:14165746-14165765 | Msa0105600:CDS | 40.0% | |
| !! | TCGTGTTGGTGCTATTGAAA+TGG | - | chr1_3:14165760-14165779 | Msa0105600:CDS | 40.0% |
| TATGCGTATTGCATTCAAGG+AGG | - | chr1_3:14165946-14165965 | Msa0105600:CDS | 40.0% | |
| GTGCAGTTAGGCATTTAGTA+CGG | - | chr1_3:14165972-14165991 | Msa0105600:CDS | 40.0% | |
| ATCCGATCGATAACCATTCT+AGG | - | chr1_3:14166359-14166378 | Msa0105600:intron | 40.0% | |
| TCCGATCGATAACCATTCTA+GGG | - | chr1_3:14166360-14166379 | Msa0105600:intron | 40.0% | |
| ACCCTAGAATGGTTATCGAT+CGG | + | chr1_3:14166364-14166383 | None:intergenic | 40.0% | |
| !! | CGATAACCATTCTAGGGTTA+AGG | - | chr1_3:14166366-14166385 | Msa0105600:intron | 40.0% |
| CATCCGTATTATGCAATGGT+TGG | + | chr1_3:14166622-14166641 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr1_3:14166913-14166932 | Msa0105600:intron | 40.0% | |
| !! | GAATCTAAGAAGGCATTTGG+TGG | - | chr1_3:14167373-14167392 | Msa0105600:CDS | 40.0% |
| !! | CCTTGGGTTTGTTTTCGATA+CGG | + | chr1_3:14167440-14167459 | None:intergenic | 40.0% |
| ! | CAAACCCAAGGTTAGCTAAA+AGG | - | chr1_3:14167449-14167468 | Msa0105600:CDS | 40.0% |
| ! | GATATGAACCACAAGGGTAT+AGG | - | chr1_3:14167471-14167490 | Msa0105600:CDS | 40.0% |
| AGGACTTCAAAATCTCCACA+AGG | + | chr1_3:14167663-14167682 | None:intergenic | 40.0% | |
| !! | TGCGGCTTTTTCTTGTAAAC+TGG | + | chr1_3:14167692-14167711 | None:intergenic | 40.0% |
| CACAAACTCAAGAACAGATG+CGG | + | chr1_3:14167710-14167729 | None:intergenic | 40.0% | |
| GAAATAATCGGACTCAGTGT+TGG | + | chr1_3:14167745-14167764 | None:intergenic | 40.0% | |
| !! | ACTGAGTCCGATTATTTCTG+TGG | - | chr1_3:14167747-14167766 | Msa0105600:CDS | 40.0% |
| ! | AGTGTGGTGATTTTTGCTAG+TGG | - | chr1_3:14167937-14167956 | Msa0105600:CDS | 40.0% |
| CTTCTTTAGCACCACTTACA+TGG | - | chr1_3:14167985-14168004 | Msa0105600:CDS | 40.0% | |
| GAAGATTAGTGCCATGTAAG+TGG | + | chr1_3:14167999-14168018 | None:intergenic | 40.0% | |
| TTATACGTATGCAGCAGAGA+CGG | - | chr1_3:14168054-14168073 | Msa0105600:intron | 40.0% | |
| ! | CTCTTTAGAAGCACAGGAAA+AGG | - | chr1_3:14168402-14168421 | Msa0105600:intron | 40.0% |
| TAGAATAGTATCTGAAGGGG+TGG | - | chr1_3:14168441-14168460 | Msa0105600:intron | 40.0% | |
| TTCCGAAATAATAGCTCCTG+TGG | + | chr1_3:14168473-14168492 | None:intergenic | 40.0% | |
| ACAGGAGCTATTATTTCGGA+AGG | - | chr1_3:14168472-14168491 | Msa0105600:intron | 40.0% | |
| CAGGAGCTATTATTTCGGAA+GGG | - | chr1_3:14168473-14168492 | Msa0105600:intron | 40.0% | |
| AGGAGCTATTATTTCGGAAG+GGG | - | chr1_3:14168474-14168493 | Msa0105600:intron | 40.0% | |
| TTGGTGAAGCTGATTGAAGA+AGG | - | chr1_3:14168508-14168527 | Msa0105600:intron | 40.0% | |
| TTCTGTCAGAAAAACCACAG+TGG | - | chr1_3:14168644-14168663 | Msa0105600:intron | 40.0% | |
| AGAAAAACCACAGTGGCAAA+GGG | - | chr1_3:14168651-14168670 | Msa0105600:intron | 40.0% | |
| ACTTCATTTGCTCAGGAGTT+TGG | - | chr1_3:14168675-14168694 | Msa0105600:intron | 40.0% | |
| !!! | TCTTAGTTTTGGGCCATTTG+AGG | - | chr1_3:14168839-14168858 | Msa0105600:CDS | 40.0% |
| AAGTAGACTTCGTCCTCAAA+TGG | + | chr1_3:14168855-14168874 | None:intergenic | 40.0% | |
| ATTTGAGGACGAAGTCTACT+TGG | - | chr1_3:14168854-14168873 | Msa0105600:CDS | 40.0% | |
| TTTGAGGACGAAGTCTACTT+GGG | - | chr1_3:14168855-14168874 | Msa0105600:CDS | 40.0% | |
| CCTTCGTCGGAAAACAAGAT+AGG | + | chr1_3:14162595-14162614 | None:intergenic | 45.0% | |
| !!! | CCTATCTTGTTTTCCGACGA+AGG | - | chr1_3:14162592-14162611 | Msa0105600:three_prime_UTR | 45.0% |
| !! | AGGAAGAGGGTGTTAGGATT+GGG | + | chr1_3:14162697-14162716 | None:intergenic | 45.0% |
| GTGTTAAGGTTGGAGGAAGA+GGG | + | chr1_3:14162710-14162729 | None:intergenic | 45.0% | |
| AGTGTTAAGGTTGGAGGAAG+AGG | + | chr1_3:14162711-14162730 | None:intergenic | 45.0% | |
| !! | GCGCGAAATGAGAAGTGTTA+AGG | + | chr1_3:14162724-14162743 | None:intergenic | 45.0% |
| AACAGCAGGGACTTGAGTTT+AGG | - | chr1_3:14163486-14163505 | Msa0105600:CDS | 45.0% | |
| GGGGAATCATCTTCTGACTT+TGG | - | chr1_3:14163629-14163648 | Msa0105600:intron | 45.0% | |
| ! | TGACTTTGGTGATAGCTACG+TGG | - | chr1_3:14163643-14163662 | Msa0105600:intron | 45.0% |
| !! | GCCTTGTTTGTTCGTATGCT+AGG | - | chr1_3:14163665-14163684 | Msa0105600:intron | 45.0% |
| GCCTAGCATACGAACAAACA+AGG | + | chr1_3:14163669-14163688 | None:intergenic | 45.0% | |
| CCGAACTAGATTCTGCTCTA+AGG | + | chr1_3:14163817-14163836 | None:intergenic | 45.0% | |
| ! | AGAATCTAGTTCGGCTTGTG+AGG | - | chr1_3:14163823-14163842 | Msa0105600:CDS | 45.0% |
| ACAATCATCCTTGGCTTCTG+AGG | - | chr1_3:14163943-14163962 | Msa0105600:CDS | 45.0% | |
| !! | ATCCTTGGCTTCTGAGGTAT+AGG | - | chr1_3:14163949-14163968 | Msa0105600:CDS | 45.0% |
| TTCCTATACCTCAGAAGCCA+AGG | + | chr1_3:14163954-14163973 | None:intergenic | 45.0% | |
| CTGCTTCAACCATGATGTCA+TGG | + | chr1_3:14164231-14164250 | None:intergenic | 45.0% | |
| CATGACATCATGGTTGAAGC+AGG | - | chr1_3:14164229-14164248 | Msa0105600:CDS | 45.0% | |
| CATAAGCAGGCCACTATAGA+AGG | + | chr1_3:14164525-14164544 | None:intergenic | 45.0% | |
| TTCCTGCTCAAGAGTTGTGT+TGG | - | chr1_3:14164560-14164579 | Msa0105600:intron | 45.0% | |
| AACCAACACAACTCTTGAGC+AGG | + | chr1_3:14164565-14164584 | None:intergenic | 45.0% | |
| ! | GCTAATTTTGTGCAAGGACG+TGG | - | chr1_3:14164768-14164787 | Msa0105600:CDS | 45.0% |
| AGAACCTTTGTTGACCAGGA+AGG | + | chr1_3:14165031-14165050 | None:intergenic | 45.0% | |
| GTTGAGATTTAGGGATCGGA+TGG | + | chr1_3:14165196-14165215 | None:intergenic | 45.0% | |
| GCATCAAGAGAAAGGACCTT+TGG | + | chr1_3:14165354-14165373 | None:intergenic | 45.0% | |
| TAGGCTGCAGCACCTATTAA+TGG | + | chr1_3:14165548-14165567 | None:intergenic | 45.0% | |
| CTTTCGATTTCTGTGCCATC+TGG | + | chr1_3:14165611-14165630 | None:intergenic | 45.0% | |
| CAGATGGCACAGAAATCGAA+AGG | - | chr1_3:14165609-14165628 | Msa0105600:CDS | 45.0% | |
| !! | GGCGCATCAGAAGTACTTAT+TGG | - | chr1_3:14165656-14165675 | Msa0105600:CDS | 45.0% |
| CAATAGCACCAACACGAACA+AGG | + | chr1_3:14165757-14165776 | None:intergenic | 45.0% | |
| ACACTCTTGCATTGGATCGA+CGG | - | chr1_3:14165830-14165849 | Msa0105600:CDS | 45.0% | |
| ! | CAATGATAATGCAGTCCAGC+TGG | - | chr1_3:14166006-14166025 | Msa0105600:CDS | 45.0% |
| ! | CTTTGGAAAAGCTGTCTGCT+AGG | - | chr1_3:14166041-14166060 | Msa0105600:CDS | 45.0% |
| CAGTTGACAGGGAGAAAAGA+TGG | - | chr1_3:14166264-14166283 | Msa0105600:intron | 45.0% | |
| ATGGTGAAAGGTAGACCCTA+TGG | - | chr1_3:14166532-14166551 | Msa0105600:intron | 45.0% | |
| !! | AATAGGGATGGCTTTGACAG+TGG | - | chr1_3:14166658-14166677 | Msa0105600:intron | 45.0% |
| !! | ATAGGGATGGCTTTGACAGT+GGG | - | chr1_3:14166659-14166678 | Msa0105600:intron | 45.0% |
| TAAAGGAGCTAAACCACCCT+CGG | + | chr1_3:14166813-14166832 | None:intergenic | 45.0% | |
| TTAAAACGCTCAGACGTAGC+TGG | - | chr1_3:14166842-14166861 | Msa0105600:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr1_3:14166911-14166930 | None:intergenic | 45.0% | |
| ATGAGTCAGTTATTCCGGGA+CGG | - | chr1_3:14167103-14167122 | Msa0105600:intron | 45.0% | |
| !! | TGTTTTCGATACGGCTTGCT+CGG | + | chr1_3:14167431-14167450 | None:intergenic | 45.0% |
| CCGTATCGAAAACAAACCCA+AGG | - | chr1_3:14167437-14167456 | Msa0105600:CDS | 45.0% | |
| CGCATCTGTTCTTGAGTTTG+TGG | - | chr1_3:14167708-14167727 | Msa0105600:CDS | 45.0% | |
| GCTATTGAACTTGAAGAGGC+CGG | - | chr1_3:14168112-14168131 | Msa0105600:intron | 45.0% | |
| TGCTGCAGATATTGCAAGAC+CGG | + | chr1_3:14168134-14168153 | None:intergenic | 45.0% | |
| TTGCAATATCTGCAGCATCG+CGG | - | chr1_3:14168137-14168156 | Msa0105600:intron | 45.0% | |
| AGCGTGTCAATGAAATGGGA+GGG | + | chr1_3:14168211-14168230 | None:intergenic | 45.0% | |
| ! | ATTCAGCACTTCTAGCTGCT+GGG | - | chr1_3:14168596-14168615 | Msa0105600:intron | 45.0% |
| CAGAAAAACCACAGTGGCAA+AGG | - | chr1_3:14168650-14168669 | Msa0105600:intron | 45.0% | |
| !! | AAAGGGCACTTCATTTGCTC+AGG | - | chr1_3:14168668-14168687 | Msa0105600:intron | 45.0% |
| TTGGAAACATGACGAGTCCA+TGG | - | chr1_3:14168694-14168713 | Msa0105600:intron | 45.0% | |
| TGGAAACATGACGAGTCCAT+GGG | - | chr1_3:14168695-14168714 | Msa0105600:intron | 45.0% | |
| ! | TTGTTTTCCGACGAAGGGTC+TGG | - | chr1_3:14162598-14162617 | Msa0105600:three_prime_UTR | 50.0% |
| !! | GAGGAAGAGGGTGTTAGGAT+TGG | + | chr1_3:14162698-14162717 | None:intergenic | 50.0% |
| CGAGGAAGAGAGAGTAACTC+TGG | + | chr1_3:14162771-14162790 | None:intergenic | 50.0% | |
| ! | GGGTGATTTGGAAGAGTACG+AGG | + | chr1_3:14162789-14162808 | None:intergenic | 50.0% |
| AGGGAGTTTGGAGGGTGATT+TGG | + | chr1_3:14162801-14162820 | None:intergenic | 50.0% | |
| GCAAAGAGAGGGAGTTTGGA+GGG | + | chr1_3:14162809-14162828 | None:intergenic | 50.0% | |
| GAGTGAACCTGGCAAAGAGA+GGG | + | chr1_3:14162820-14162839 | None:intergenic | 50.0% | |
| ATTAAAACTCACGGGGGAGG+CGG | + | chr1_3:14162885-14162904 | None:intergenic | 50.0% | |
| GAGATTAAAACTCACGGGGG+AGG | + | chr1_3:14162888-14162907 | None:intergenic | 50.0% | |
| !!! | TCGCTGTTTTAGGGCCTGTT+TGG | - | chr1_3:14163194-14163213 | Msa0105600:CDS | 50.0% |
| ATCTTCACTCGCTTCGTGAG+TGG | - | chr1_3:14163425-14163444 | Msa0105600:CDS | 50.0% | |
| GAAAGTGAAGGAAGCTGCAG+CGG | - | chr1_3:14164171-14164190 | Msa0105600:CDS | 50.0% | |
| AAAGTGAAGGAAGCTGCAGC+GGG | - | chr1_3:14164172-14164191 | Msa0105600:CDS | 50.0% | |
| AAGTTCCTACAGAGCAGGAG+AGG | + | chr1_3:14164465-14164484 | None:intergenic | 50.0% | |
| TCTCCTGCTCTGTAGGAACT+TGG | - | chr1_3:14164464-14164483 | Msa0105600:intron | 50.0% | |
| GAAGCCTTCCTGGTCAACAA+AGG | - | chr1_3:14165024-14165043 | Msa0105600:intron | 50.0% | |
| GCAGCACCTATTAATGGCAC+AGG | + | chr1_3:14165542-14165561 | None:intergenic | 50.0% | |
| TCTGTGCCATCTGGAAATGC+AGG | + | chr1_3:14165602-14165621 | None:intergenic | 50.0% | |
| !! | CAATGCAAGAGTGTCAGACG+CGG | + | chr1_3:14165824-14165843 | None:intergenic | 50.0% |
| CGTATTGCATTCAAGGAGGC+TGG | - | chr1_3:14165950-14165969 | Msa0105600:CDS | 50.0% | |
| TTGCCGAGTGATTGAAACCG+AGG | - | chr1_3:14166793-14166812 | Msa0105600:intron | 50.0% | |
| TGCCGAGTGATTGAAACCGA+GGG | - | chr1_3:14166794-14166813 | Msa0105600:intron | 50.0% | |
| CACCCTCGGTTTCAATCACT+CGG | + | chr1_3:14166799-14166818 | None:intergenic | 50.0% | |
| AGACGTAGCTGGAGCTATTG+CGG | - | chr1_3:14166853-14166872 | Msa0105600:intron | 50.0% | |
| AGCTGGAGCTATTGCGGAAA+AGG | - | chr1_3:14166859-14166878 | Msa0105600:intron | 50.0% | |
| ATTTCTTACTCCCTCCGTCC+CGG | - | chr1_3:14166894-14166913 | Msa0105600:intron | 50.0% | |
| GTCAATTATACCGGGACGGA+GGG | + | chr1_3:14166907-14166926 | None:intergenic | 50.0% | |
| AACATATACTCCCTCCGTCC+CGG | + | chr1_3:14167120-14167139 | None:intergenic | 50.0% | |
| !! | TGGAGCCGATGATGGATCAA+AGG | - | chr1_3:14167393-14167412 | Msa0105600:CDS | 50.0% |
| ! | AGTTTTCACTGCACGCCTTG+TGG | - | chr1_3:14167645-14167664 | Msa0105600:intron | 50.0% |
| GAGCGTGTCAATGAAATGGG+AGG | + | chr1_3:14168212-14168231 | None:intergenic | 50.0% | |
| GCGGAGCGTGTCAATGAAAT+GGG | + | chr1_3:14168215-14168234 | None:intergenic | 50.0% | |
| TGCGGAGCGTGTCAATGAAA+TGG | + | chr1_3:14168216-14168235 | None:intergenic | 50.0% | |
| TTTGCTGCGGAGGGGAATAT+GGG | + | chr1_3:14168251-14168270 | None:intergenic | 50.0% | |
| TACCCAATCTTTGCTGCGGA+GGG | + | chr1_3:14168260-14168279 | None:intergenic | 50.0% | |
| CAGCTACCCAATCTTTGCTG+CGG | + | chr1_3:14168264-14168283 | None:intergenic | 50.0% | |
| GGAAGGGGCTGTGTATTCTT+TGG | - | chr1_3:14168489-14168508 | Msa0105600:intron | 50.0% | |
| !! | CAGCAGCTAGAAGTGCTGAA+TGG | + | chr1_3:14168597-14168616 | None:intergenic | 50.0% |
| ! | CATTCAGCACTTCTAGCTGC+TGG | - | chr1_3:14168595-14168614 | Msa0105600:intron | 50.0% |
| ! | TTCAGCACTTCTAGCTGCTG+GGG | - | chr1_3:14168597-14168616 | Msa0105600:intron | 50.0% |
| AACATGACGAGTCCATGGGA+AGG | - | chr1_3:14168699-14168718 | Msa0105600:intron | 50.0% | |
| ! | TCTTTGTACCGGTGAGTCGA+TGG | - | chr1_3:14169007-14169026 | Msa0105600:five_prime_UTR | 50.0% |
| !! | AAAACCAGCCATCGACTCAC+CGG | + | chr1_3:14169018-14169037 | None:intergenic | 50.0% |
| TCCAGTTCCAGACCCTTCGT+CGG | + | chr1_3:14162608-14162627 | None:intergenic | 55.0% | |
| !! | GGTTGGAGGAAGAGGGTGTT+AGG | + | chr1_3:14162703-14162722 | None:intergenic | 55.0% |
| GGCAAAGAGAGGGAGTTTGG+AGG | + | chr1_3:14162810-14162829 | None:intergenic | 55.0% | |
| CCTGGCAAAGAGAGGGAGTT+TGG | + | chr1_3:14162813-14162832 | None:intergenic | 55.0% | |
| CCAAACTCCCTCTCTTTGCC+AGG | - | chr1_3:14162810-14162829 | Msa0105600:three_prime_UTR | 55.0% | |
| CGAGTGAACCTGGCAAAGAG+AGG | + | chr1_3:14162821-14162840 | None:intergenic | 55.0% | |
| GGTGCAACTACGAGTGAACC+TGG | + | chr1_3:14162831-14162850 | None:intergenic | 55.0% | |
| TTAAAACTCACGGGGGAGGC+GGG | + | chr1_3:14162884-14162903 | None:intergenic | 55.0% | |
| ! | GGAAGCTGCAGCGGGTATTT+TGG | - | chr1_3:14164180-14164199 | Msa0105600:CDS | 55.0% |
| TACAGAGCAGGAGAGGATCC+AGG | + | chr1_3:14164458-14164477 | None:intergenic | 55.0% | |
| TGGATCCTCTCCTGCTCTGT+AGG | - | chr1_3:14164457-14164476 | Msa0105600:intron | 55.0% | |
| CTGCCAAGTTCCTACAGAGC+AGG | + | chr1_3:14164470-14164489 | None:intergenic | 55.0% | |
| CAGGCGCCTCGTATAAACGT+GGG | + | chr1_3:14165583-14165602 | None:intergenic | 55.0% | |
| CGCGTCTGACACTCTTGCAT+TGG | - | chr1_3:14165822-14165841 | Msa0105600:CDS | 55.0% | |
| TCAAGGAGGCTGGTGCAGTT+AGG | - | chr1_3:14165960-14165979 | Msa0105600:CDS | 55.0% | |
| CGAGTGATTGAAACCGAGGG+TGG | - | chr1_3:14166797-14166816 | Msa0105600:intron | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr1_3:14166908-14166927 | None:intergenic | 55.0% | |
| AGTCAGTTATTCCGGGACGG+AGG | - | chr1_3:14167106-14167125 | Msa0105600:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr1_3:14167107-14167126 | Msa0105600:intron | 55.0% | |
| ! | GCATTTGGTGGAGCCGATGA+TGG | - | chr1_3:14167385-14167404 | Msa0105600:CDS | 55.0% |
| AGCAGAGACGGAATCTGACG+TGG | - | chr1_3:14168066-14168085 | Msa0105600:intron | 55.0% | |
| CTTTGCTGCGGAGGGGAATA+TGG | + | chr1_3:14168252-14168271 | None:intergenic | 55.0% | |
| TTCCCCTCCGCAGCAAAGAT+TGG | - | chr1_3:14168254-14168273 | Msa0105600:intron | 55.0% | |
| TCCCCTCCGCAGCAAAGATT+GGG | - | chr1_3:14168255-14168274 | Msa0105600:intron | 55.0% | |
| ACCCAATCTTTGCTGCGGAG+GGG | + | chr1_3:14168259-14168278 | None:intergenic | 55.0% | |
| CTACCCAATCTTTGCTGCGG+AGG | + | chr1_3:14168261-14168280 | None:intergenic | 55.0% | |
| GAAGGGGTGGTAGATTCCAC+AGG | - | chr1_3:14168454-14168473 | Msa0105600:intron | 55.0% | |
| ! | TGAAGTGCCCTTTGCCACTG+TGG | + | chr1_3:14168661-14168680 | None:intergenic | 55.0% |
| ! | TCCGACGAAGGGTCTGGAAC+TGG | - | chr1_3:14162604-14162623 | Msa0105600:three_prime_UTR | 60.0% |
| GCAGGCGCCTCGTATAAACG+TGG | + | chr1_3:14165584-14165603 | None:intergenic | 60.0% | |
| ! | GAGGCGCCTGCATTTCCAGA+TGG | - | chr1_3:14165593-14165612 | Msa0105600:CDS | 60.0% |
| ! | TGTACCGGTGAGTCGATGGC+TGG | - | chr1_3:14169011-14169030 | Msa0105600:five_prime_UTR | 60.0% |
| ! | TCGGCTTGTGAGGCAGCTGC+AGG | - | chr1_3:14163833-14163852 | Msa0105600:CDS | 65.0% |
| AAGCTTGCGTCGCTGCCAGC+TGG | + | chr1_3:14166024-14166043 | None:intergenic | 65.0% | |
| GCTGGCAGCGACGCAAGCTT+TGG | - | chr1_3:14166024-14166043 | Msa0105600:CDS | 65.0% | |
| ! | CACGGGGGAGGCGGGAGCAG+CGG | + | chr1_3:14162876-14162895 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 14162578 | 14169040 | 14162578 | ID=Msa0105600;Name=Msa0105600 |
| chr1_3 | mRNA | 14162578 | 14169040 | 14162578 | ID=Msa0105600-mRNA-1;Parent=Msa0105600;Name=Msa0105600-mRNA-1;_AED=0.05;_eAED=0.05;_QI=96|1|1|1|1|1|9|335|842 |
| chr1_3 | exon | 14162578 | 14163550 | 14162578 | ID=Msa0105600-mRNA-1:exon:5528;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14163795 | 14163991 | 14163795 | ID=Msa0105600-mRNA-1:exon:5527;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14164160 | 14164266 | 14164160 | ID=Msa0105600-mRNA-1:exon:5526;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14164347 | 14164400 | 14164347 | ID=Msa0105600-mRNA-1:exon:5525;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14164738 | 14164834 | 14164738 | ID=Msa0105600-mRNA-1:exon:5524;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14165556 | 14166202 | 14165556 | ID=Msa0105600-mRNA-1:exon:5523;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14167351 | 14167566 | 14167351 | ID=Msa0105600-mRNA-1:exon:5522;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14167654 | 14168007 | 14167654 | ID=Msa0105600-mRNA-1:exon:5521;Parent=Msa0105600-mRNA-1 |
| chr1_3 | exon | 14168726 | 14169040 | 14168726 | ID=Msa0105600-mRNA-1:exon:5520;Parent=Msa0105600-mRNA-1 |
| chr1_3 | five_prime_UTR | 14168945 | 14169040 | 14168945 | ID=Msa0105600-mRNA-1:five_prime_utr;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14168726 | 14168944 | 14168726 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14167654 | 14168007 | 14167654 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14167351 | 14167566 | 14167351 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14165556 | 14166202 | 14165556 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14164738 | 14164834 | 14164738 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14164347 | 14164400 | 14164347 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14164160 | 14164266 | 14164160 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14163795 | 14163991 | 14163795 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | CDS | 14162913 | 14163550 | 14162913 | ID=Msa0105600-mRNA-1:cds;Parent=Msa0105600-mRNA-1 |
| chr1_3 | three_prime_UTR | 14162578 | 14162912 | 14162578 | ID=Msa0105600-mRNA-1:three_prime_utr;Parent=Msa0105600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
