AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0544600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544600 MtrunA17_Chr4g0009831 90.647 834 31 5 1 834 1 787 0.0 1484
Msa0544600 MtrunA17_Chr8g0370231 25.127 394 249 10 429 780 470 859 1.43e-20 97.4
Msa0544600 MtrunA17_Chr5g0424181 25.138 362 203 10 428 726 507 863 1.37e-15 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544600 AT5G02250.1 60.870 851 265 9 1 832 2 803 0.0 966
Msa0544600 AT2G17510.1 25.500 400 240 13 429 780 469 858 8.03e-24 108
Msa0544600 AT2G17510.2 25.123 406 246 13 429 780 536 937 2.54e-20 97.4
Msa0544600 AT1G77680.1 32.576 132 89 0 429 560 476 607 2.06e-12 71.6

Find 226 sgRNAs with CRISPR-Local

Find 784 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGATTGCGTTGCGTTTA+TGG 0.132721 4_1:+33432085 Msa0544600:CDS
CTCTCCCATCCGTAGATATT+TGG 0.150105 4_1:+33438316 Msa0544600:CDS
CAGCTTTAAATGATGAATTT+TGG 0.168020 4_1:-33440881 None:intergenic
GCCAGCACGCCATGGGGTTT+TGG 0.190321 4_1:+33438268 Msa0544600:CDS
GCACGGTATCTTCTCTCTTT+TGG 0.229092 4_1:-33439420 None:intergenic
AGCTGCTGAGAAAGAATTTC+AGG 0.230739 4_1:+33433436 Msa0544600:CDS
CTGCAAATCTTCGGTTAAAT+TGG 0.237762 4_1:+33437130 Msa0544600:CDS
TCCTAAAGTTGTTACTATAT+TGG 0.244553 4_1:+33441363 Msa0544600:three_prime_UTR
GGACCTTCTTGCTCATTATC+AGG 0.293979 4_1:+33438337 Msa0544600:CDS
TTTCACATGTTTAGATTAAC+AGG 0.295584 4_1:+33435734 Msa0544600:intron
GGAAGGATGAGGAGAAAATT+TGG 0.297565 4_1:+33433525 Msa0544600:CDS
ATGGAAGCGGAGAGCGGAGG+GGG 0.302931 4_1:-33429044 None:intergenic
CCAACAGTAGTCTCCGTTAC+TGG 0.304352 4_1:+33439373 Msa0544600:CDS
CACATTACAATATACATTCT+TGG 0.312391 4_1:-33441172 None:intergenic
GTGCAGCTGAAATTGATTTC+AGG 0.320002 4_1:+33438243 Msa0544600:CDS
GTGAAGCGTTCCTTGCAAAA+AGG 0.320722 4_1:+33431388 Msa0544600:CDS
TTAAATACAGAAGAACTTCT+AGG 0.321095 4_1:-33440736 None:intergenic
AAGCTCCTAACAGGCCCTTC+TGG 0.330580 4_1:-33438200 None:intergenic
GATATCTGCTTGGTCAAAAT+TGG 0.335690 4_1:-33431697 None:intergenic
TCAGAGACTAATCGCATTGC+AGG 0.338662 4_1:-33438062 None:intergenic
GGGAGGAAGAGCGGAGGAGC+GGG 0.344627 4_1:-33428976 None:intergenic
AAGAACAAGAAAGTAATCTT+TGG 0.347438 4_1:-33434086 None:intergenic
CAGATAAAGGCATTTCTTAG+AGG 0.347763 4_1:+33439267 Msa0544600:intron
GTAAATCTCTTGATAGATAT+TGG 0.348764 4_1:+33434182 Msa0544600:CDS
CAGGACTTCATCAAACTGTT+AGG 0.362118 4_1:+33433455 Msa0544600:CDS
TCCAATATAGTAACAACTTT+AGG 0.363143 4_1:-33441364 None:intergenic
CTTGCAGATACTAAAGGAAA+TGG 0.367872 4_1:+33434133 Msa0544600:CDS
CTCATCCTTCCACGAAGATC+TGG 0.368593 4_1:-33433513 None:intergenic
CCCAGTCAGCTTGGCTAGTT+CGG 0.370832 4_1:+33440814 Msa0544600:three_prime_UTR
AGAAGGTTTCAGAGTTTCAT+TGG 0.370985 4_1:-33428924 None:intergenic
AGGATGGAAGCGGAGAGCGG+AGG 0.372518 4_1:-33429047 None:intergenic
CATCACTACTTGAATTTGCT+TGG 0.374236 4_1:+33431846 Msa0544600:CDS
GACCTGATGGCAAGAAGAAC+TGG 0.375215 4_1:+33431467 Msa0544600:CDS
TGTCTCGATCATAGTGGATA+TGG 0.375653 4_1:+33441257 Msa0544600:three_prime_UTR
CATCAATGGCATAGACCTTC+AGG 0.382711 4_1:-33435771 None:intergenic
TCTACATAAAGGTTTATTGA+TGG 0.385755 4_1:-33438026 None:intergenic
TAAGTTCAACCTCCTCTTCA+AGG 0.387057 4_1:-33437092 None:intergenic
AGGGGATGAAGTAGTGGTTA+AGG 0.387235 4_1:+33440611 Msa0544600:CDS
AAACCTTTATGTAGAAAATC+AGG 0.389129 4_1:+33438034 Msa0544600:CDS
GGATGGAAGCGGAGAGCGGA+GGG 0.389542 4_1:-33429046 None:intergenic
TTTCTTGCGGAGTTTACGTT+TGG 0.390817 4_1:-33429152 None:intergenic
GAACTGGATGGTTTCAGATC+AGG 0.391570 4_1:+33431483 Msa0544600:CDS
TGATGGAGCGAGTTTGAGTA+TGG 0.393873 4_1:-33429093 None:intergenic
TGTCACTTGTTGTGGCTTGA+TGG 0.394461 4_1:-33431655 None:intergenic
TGAAGATGAAGAAGCATTAA+CGG 0.395467 4_1:-33429182 None:intergenic
GACGGTGGAGAGAGAAGGGG+AGG 0.396283 4_1:-33428993 None:intergenic
ATTGATGGCTCTGGATCCTC+TGG 0.396536 4_1:-33438011 None:intergenic
ATCCAGTTCTTCTTGCCATC+AGG 0.396705 4_1:-33431469 None:intergenic
ATCTTCCAGAAGGGCCTGTT+AGG 0.398842 4_1:+33438195 Msa0544600:CDS
AAGATGGTCGGATTAACATT+TGG 0.401203 4_1:+33435943 Msa0544600:CDS
TGCAGCTCTGTTGTTGGTTG+AGG 0.401220 4_1:+33439473 Msa0544600:CDS
TTGGATTTCAAGCTACTGCT+TGG 0.404806 4_1:+33440568 Msa0544600:CDS
TTTAAGATGGTCTCTAATAG+AGG 0.405598 4_1:+33440980 Msa0544600:three_prime_UTR
ACTAGGGCAAAGCTCCTAAC+AGG 0.406665 4_1:-33438209 None:intergenic
ACATTACAATATACATTCTT+GGG 0.408147 4_1:-33441171 None:intergenic
TGGAAGCGGAGAGCGGAGGG+GGG 0.410652 4_1:-33429043 None:intergenic
AGGAGGGAGGAGGATGGAAG+CGG 0.412834 4_1:-33429057 None:intergenic
GGGAGGAGGAGGGAGGAGGA+TGG 0.414129 4_1:-33429063 None:intergenic
TGGATTTCAAGCTACTGCTT+GGG 0.414963 4_1:+33440569 Msa0544600:CDS
TACCTATCCACAATACTTCC+AGG 0.417222 4_1:-33435999 None:intergenic
ATGGCAGACATGGGAGGAGG+AGG 0.419591 4_1:-33429074 None:intergenic
TAAAGGTTTATTGATGGCTC+TGG 0.421693 4_1:-33438020 None:intergenic
AAGCCTCTTCGAAACCGTTA+TGG 0.421825 4_1:+33429117 Msa0544600:CDS
ATTTCAACAAGTTGTTCAAA+AGG 0.432475 4_1:+33440706 Msa0544600:three_prime_UTR
GTTAAATTGGCGCCGCCAGC+AGG 0.432558 4_1:+33437143 Msa0544600:CDS
GGCGAAGCTATAGCTACATT+TGG 0.436547 4_1:+33438101 Msa0544600:CDS
CATAGACCTTCAGGTTAGTA+AGG 0.437715 4_1:-33435762 None:intergenic
AAATCAAGATTGACATGTAT+AGG 0.439477 4_1:-33434211 None:intergenic
AGAGAGAAGGGGAGGAAGAG+CGG 0.447297 4_1:-33428985 None:intergenic
ACCGAACTAGCCAAGCTGAC+TGG 0.447772 4_1:-33440815 None:intergenic
GTCTCAGTTGGATCACAGAT+AGG 0.448663 4_1:+33440591 Msa0544600:CDS
CCCAAAACCCCATGGCGTGC+TGG 0.450674 4_1:-33438269 None:intergenic
TCGCATTGCAGCTCTGTTGT+TGG 0.452884 4_1:+33439467 Msa0544600:CDS
TAACAGGCCCTTCTGGAAGA+TGG 0.456437 4_1:-33438193 None:intergenic
GATGGAAGCGGAGAGCGGAG+GGG 0.456576 4_1:-33429045 None:intergenic
GGGGACGGTGGAGAGAGAAG+GGG 0.459311 4_1:-33428996 None:intergenic
TGAGGAGCTTATTCGTAGAA+AGG 0.460349 4_1:+33433403 Msa0544600:CDS
TTCATTAGATGTTAGAGAGT+GGG 0.465341 4_1:+33441111 Msa0544600:three_prime_UTR
ATAACATTCCTTTACCCTAC+AGG 0.466109 4_1:+33438132 Msa0544600:CDS
CAAGTGACATATATTGTTCC+CGG 0.469433 4_1:+33431669 Msa0544600:CDS
ACAACTTGTTGAAATTGAAA+AGG 0.469508 4_1:-33440698 None:intergenic
GGCGGTGTGGGGATAAGAAG+CGG 0.470639 4_1:-33429018 None:intergenic
GGGGAGGAAGAGCGGAGGAG+CGG 0.473207 4_1:-33428977 None:intergenic
GAAAGATTTATATCTGATTG+AGG 0.479892 4_1:-33438161 None:intergenic
AACTCTGAAACCTTCTTCAA+TGG 0.480476 4_1:+33428931 Msa0544600:exon
CCGAACTAGCCAAGCTGACT+GGG 0.481253 4_1:-33440814 None:intergenic
GTTAATAATGGGCAAACTAT+CGG 0.483393 4_1:-33440955 None:intergenic
TGTCTGAGGCTGCAAATCTT+CGG 0.486597 4_1:+33437121 Msa0544600:CDS
TCAGGAAGCCAGCACGCCAT+GGG 0.487143 4_1:+33438261 Msa0544600:CDS
GAGCCTCCACCCTTTACATC+TGG 0.487578 4_1:+33439291 Msa0544600:CDS
CAGATCTTCGTGGAAGGATG+AGG 0.493266 4_1:+33433514 Msa0544600:CDS
ATGCTTCTTGCAGATACTAA+AGG 0.494187 4_1:+33434127 Msa0544600:CDS
CAAGCAAATTCAAGTAGTGA+TGG 0.494516 4_1:-33431845 None:intergenic
TTCGAGATTACCAGATGTAA+AGG 0.496296 4_1:-33439301 None:intergenic
ACATGGGAGGAGGAGGGAGG+AGG 0.496521 4_1:-33429067 None:intergenic
GCTCGAACAGCCATTGAAGA+AGG 0.497086 4_1:-33428941 None:intergenic
ACAATATATGTCACTTGTTG+TGG 0.497382 4_1:-33431663 None:intergenic
TTACTGAAAATTCATGGCTG+AGG 0.498053 4_1:+33441044 Msa0544600:three_prime_UTR
TGCAGTGGCATAAAGTTAGC+AGG 0.498419 4_1:+33440920 Msa0544600:three_prime_UTR
TTGGTCAAAATTGGATATGC+CGG 0.499648 4_1:-33431688 None:intergenic
TACTGAAAATTCATGGCTGA+GGG 0.500883 4_1:+33441045 Msa0544600:three_prime_UTR
CTATAGCTACATTTGGATCT+CGG 0.500967 4_1:+33438108 Msa0544600:CDS
GCTACTGCTTGGGTCTCAGT+TGG 0.501138 4_1:+33440579 Msa0544600:CDS
GAAGTGCGATCACGCTTCAC+TGG 0.504802 4_1:+33440858 Msa0544600:three_prime_UTR
TTGCAGATACTAAAGGAAAT+GGG 0.505523 4_1:+33434134 Msa0544600:CDS
AATACATCTACCTGCTCACT+TGG 0.505938 4_1:-33432115 None:intergenic
ATTCATTAGATGTTAGAGAG+TGG 0.506772 4_1:+33441110 Msa0544600:three_prime_UTR
TTCAGGAAGCCAGCACGCCA+TGG 0.510004 4_1:+33438260 Msa0544600:CDS
TGTAGTAATGCATTGCCAAA+AGG 0.510342 4_1:+33441007 Msa0544600:three_prime_UTR
TTTACTATACTCGAATCTAA+AGG 0.510666 4_1:+33432067 Msa0544600:CDS
GAGAATTCCCACTGATCACT+TGG 0.511382 4_1:+33434243 Msa0544600:CDS
GGCTTGAAGTTCTTCCATAA+CGG 0.511715 4_1:-33429131 None:intergenic
GCGGTGTGGGGATAAGAAGC+GGG 0.514222 4_1:-33429017 None:intergenic
GATACTAAAGGAAATGGGTC+TGG 0.515799 4_1:+33434139 Msa0544600:CDS
CAGACATGGGAGGAGGAGGG+AGG 0.516499 4_1:-33429070 None:intergenic
TCTCAGTTGGATCACAGATA+GGG 0.517800 4_1:+33440592 Msa0544600:CDS
AGGAGGATGGAAGCGGAGAG+CGG 0.518220 4_1:-33429050 None:intergenic
CGATATTATTTATGTGAAGG+AGG 0.518913 4_1:+33440656 Msa0544600:CDS
AACAGGCCCTTCTGGAAGAT+GGG 0.523166 4_1:-33438192 None:intergenic
GAGTTTGAGTATGGCAGACA+TGG 0.523776 4_1:-33429084 None:intergenic
CGGTGTGGGGATAAGAAGCG+GGG 0.524283 4_1:-33429016 None:intergenic
ATCAGCTTCATCAACATCAA+TGG 0.525986 4_1:-33435785 None:intergenic
ATAAACCTTCCAGATCTTCG+TGG 0.528202 4_1:+33433504 Msa0544600:CDS
AACATAGAATATGTAGCAGT+GGG 0.531882 4_1:-33436133 None:intergenic
GGTTGTCCCCTGTAGGGTAA+AGG 0.533718 4_1:-33438140 None:intergenic
CCAGTAACGGAGACTACTGT+TGG 0.534199 4_1:-33439373 None:intergenic
TTTAGTATCTGCAAGAAGCA+TGG 0.536084 4_1:-33434125 None:intergenic
ATCTCTTCCAAGTGATCAGT+GGG 0.536634 4_1:-33434250 None:intergenic
TCGAGATTACCAGATGTAAA+GGG 0.539275 4_1:-33439300 None:intergenic
TGGCAGACATGGGAGGAGGA+GGG 0.540562 4_1:-33429073 None:intergenic
CAATTTGAACCTTGAAGAGG+AGG 0.541680 4_1:+33437083 Msa0544600:CDS
CTGCACGCATTATCTTGACT+AGG 0.542237 4_1:-33438226 None:intergenic
TGGTCAAAATTGGATATGCC+GGG 0.542295 4_1:-33431687 None:intergenic
GAGACAAAATATTACTATCC+CGG 0.543389 4_1:-33433615 None:intergenic
TGATTGAGGTTGTCCCCTGT+AGG 0.545539 4_1:-33438147 None:intergenic
GTTTCCAGAAAATCTTGCCA+TGG 0.550462 4_1:+33436153 Msa0544600:CDS
CAAGAAGGTCCAAATATCTA+CGG 0.550736 4_1:-33438325 None:intergenic
AAGCTGACTGGGAGTTAACA+AGG 0.553738 4_1:-33440803 None:intergenic
GATGAACAAAGGAAAACAGC+CGG 0.554725 4_1:+33433596 Msa0544600:CDS
TGGACCTCGACCAAGTGAGC+AGG 0.555090 4_1:+33432105 Msa0544600:CDS
AAGGTCCAAATATCTACGGA+TGG 0.556668 4_1:-33438321 None:intergenic
TAACATTCCTTTACCCTACA+GGG 0.558376 4_1:+33438133 Msa0544600:CDS
GATTGAGGTTGTCCCCTGTA+GGG 0.558678 4_1:-33438146 None:intergenic
GTCCGTGACAGTTGAAGAGA+TGG 0.560062 4_1:+33431892 Msa0544600:CDS
TGACGATATTATTTATGTGA+AGG 0.560650 4_1:+33440653 Msa0544600:CDS
TATGTGAAGGAGGTTGTAAG+AGG 0.562265 4_1:+33440666 Msa0544600:CDS
AATATTTGTCTCGATCATAG+TGG 0.567158 4_1:+33441251 Msa0544600:three_prime_UTR
TTGTTAACTCCCAGTCAGCT+TGG 0.567357 4_1:+33440805 Msa0544600:three_prime_UTR
TGTTCAACCTGGAAGTATTG+TGG 0.567891 4_1:+33435992 Msa0544600:CDS
TTTCCAGAAAATCTTGCCAT+GGG 0.567903 4_1:+33436154 Msa0544600:CDS
AATCTCGAAGGTCTAGCAGC+AGG 0.568622 4_1:+33439315 Msa0544600:CDS
GTAACAACTTTAGGAATCGC+AGG 0.568955 4_1:-33441355 None:intergenic
TTACCAGATGTAAAGGGTGG+AGG 0.571399 4_1:-33439294 None:intergenic
GGAAGAGCGGAGGAGCGGGT+AGG 0.574616 4_1:-33428972 None:intergenic
CAAATATCTACGGATGGGAG+AGG 0.574656 4_1:-33438315 None:intergenic
AGCTATGAGTGAGTGAAGGT+AGG 0.581434 4_1:-33428901 None:intergenic
TTGTGCTGCATGACGATGGC+AGG 0.582075 4_1:+33436227 Msa0544600:CDS
CAAAATGTGTGATATCTGCT+TGG 0.584135 4_1:-33431707 None:intergenic
AGCCATCTCTTCAACTGTCA+CGG 0.584978 4_1:-33431894 None:intergenic
ACTCAATTTGAACCTTGAAG+AGG 0.594338 4_1:+33437080 Msa0544600:CDS
TCATATGTTAACATGTACGT+TGG 0.594529 4_1:-33437042 None:intergenic
TGCACGCATTATCTTGACTA+GGG 0.594838 4_1:-33438225 None:intergenic
CTGGAAGGTTTATCGTGTGA+AGG 0.596968 4_1:-33433494 None:intergenic
CACAGGGAGGCTATGAGAAG+AGG 0.598459 4_1:+33436094 Msa0544600:intron
AAGCAAATTCAAGTAGTGAT+GGG 0.598610 4_1:-33431844 None:intergenic
ATGAACAAAGGAAAACAGCC+GGG 0.598963 4_1:+33433597 Msa0544600:CDS
AGGTCCAAATATCTACGGAT+GGG 0.599467 4_1:-33438320 None:intergenic
AAAATTTAAGGACTAAAGCA+CGG 0.603113 4_1:-33439437 None:intergenic
CTTGTATAAGTGATGAACAA+AGG 0.604324 4_1:+33433585 Msa0544600:CDS
ACAGATAGGGGATGAAGTAG+TGG 0.607271 4_1:+33440605 Msa0544600:CDS
ACCTTCCAGATCTTCGTGGA+AGG 0.608447 4_1:+33433508 Msa0544600:CDS
CTCAGTTGGATCACAGATAG+GGG 0.608551 4_1:+33440593 Msa0544600:CDS
GAAGAACCTTACTAACCTGA+AGG 0.608563 4_1:+33435756 Msa0544600:CDS
AAACATAGAATATGTAGCAG+TGG 0.610030 4_1:-33436134 None:intergenic
TCCTTCCACGAAGATCTGGA+AGG 0.610968 4_1:-33433509 None:intergenic
AGTATGGCAGACATGGGAGG+AGG 0.611158 4_1:-33429077 None:intergenic
CTTCCATAACGGTTTCGAAG+AGG 0.611956 4_1:-33429120 None:intergenic
TCTACCTGCTCACTTGGTCG+AGG 0.611987 4_1:-33432109 None:intergenic
CTCGATCATAGTGGATATGG+AGG 0.614731 4_1:+33441260 Msa0544600:three_prime_UTR
GCAGTAGCTCAGAGACCTGA+TGG 0.616317 4_1:+33431454 Msa0544600:CDS
TATTCGTAGAAAGGTTGCAA+AGG 0.616448 4_1:+33433412 Msa0544600:CDS
TCTCAAACTCATAGCTCCCA+TGG 0.618125 4_1:-33436170 None:intergenic
CAACAAAGTTACAAGATGGT+CGG 0.620904 4_1:+33435931 Msa0544600:CDS
GAGAAGGGGAGGAAGAGCGG+AGG 0.621562 4_1:-33428982 None:intergenic
TATGAGTTTGAGACAAGGGG+AGG 0.621810 4_1:+33436180 Msa0544600:CDS
TGCTCTCAAATGAAAGAGTG+TGG 0.622325 4_1:-33440777 None:intergenic
GATCTCTTCCAAGTGATCAG+TGG 0.623686 4_1:-33434251 None:intergenic
AGCTATGAGTTTGAGACAAG+GGG 0.625008 4_1:+33436177 Msa0544600:CDS
GACAGTTGAAGAGATGGCTG+AGG 0.626197 4_1:+33431898 Msa0544600:CDS
GAGGTAAATTGAACATAACC+AGG 0.626585 4_1:-33438296 None:intergenic
GTATCTGCAAGAAGCATGGA+GGG 0.629156 4_1:-33434121 None:intergenic
GGTGTGGGGATAAGAAGCGG+GGG 0.630700 4_1:-33429015 None:intergenic
TTTACATCTGGTAATCTCGA+AGG 0.634450 4_1:+33439303 Msa0544600:CDS
CAGAGACTAATCGCATTGCA+GGG 0.637990 4_1:-33438061 None:intergenic
CAGGAATTCCCAAAACCCCA+TGG 0.639470 4_1:-33438277 None:intergenic
ATGAGAAAGTTAGAGCAGTG+AGG 0.639786 4_1:+33439343 Msa0544600:CDS
ATACCTGATAATGAGCAAGA+AGG 0.641739 4_1:-33438340 None:intergenic
TCAGAAAGCTCAGGACAACA+TGG 0.644937 4_1:+33431731 Msa0544600:CDS
AGTATTCTAGTATCCAGTAA+CGG 0.646549 4_1:-33439386 None:intergenic
AGTGCAACAAAGTTACAAGA+TGG 0.646571 4_1:+33435927 Msa0544600:CDS
AACCTGGAAGTATTGTGGAT+AGG 0.646902 4_1:+33435997 Msa0544600:CDS
GAGCTATGAGTTTGAGACAA+GGG 0.648036 4_1:+33436176 Msa0544600:CDS
TGATGTTGATGAAGCTGATG+AGG 0.650498 4_1:+33435789 Msa0544600:CDS
GCAACTAGATATGTTCAACC+TGG 0.651244 4_1:+33435981 Msa0544600:CDS
TCAAATCTTTAAGCATGCAG+TGG 0.652696 4_1:+33440905 Msa0544600:three_prime_UTR
AGATTACCAGATGTAAAGGG+TGG 0.659485 4_1:-33439297 None:intergenic
TGAGCAGAATAACTCTCGAG+AGG 0.659723 4_1:-33432016 None:intergenic
AACATTCCTTTACCCTACAG+GGG 0.659934 4_1:+33438134 Msa0544600:CDS
CAGGAAGCCAGCACGCCATG+GGG 0.661101 4_1:+33438262 Msa0544600:CDS
TTGGAGCTATGAGTGAGTGA+AGG 0.662282 4_1:-33428905 None:intergenic
AATGGGCAAACTATCGGCGG+CGG 0.662714 4_1:-33440949 None:intergenic
TTGAGTATGGCAGACATGGG+AGG 0.664143 4_1:-33429080 None:intergenic
CGATGATTCGATATCAACCA+AGG 0.665054 4_1:+33441308 Msa0544600:three_prime_UTR
TCAGTTGTGCTGCATGACGA+TGG 0.673832 4_1:+33436223 Msa0544600:CDS
AGTATCTGCAAGAAGCATGG+AGG 0.676795 4_1:-33434122 None:intergenic
CATCAAAGTGTCTAATCCAG+AGG 0.679471 4_1:+33437995 Msa0544600:CDS
TGATGGCAAGAAGAACTGGA+TGG 0.679573 4_1:+33431471 Msa0544600:CDS
AGTTTGAGTATGGCAGACAT+GGG 0.682971 4_1:-33429083 None:intergenic
AGAAGAATCCTACCTGCTGG+CGG 0.688688 4_1:-33437155 None:intergenic
TAGCTATAGCTTCGCCACAG+AGG 0.696399 4_1:-33438094 None:intergenic
AGATTCATCTGATCCAGACG+AGG 0.706348 4_1:+33434300 Msa0544600:CDS
GGAGCTATGAGTTTGAGACA+AGG 0.708450 4_1:+33436175 Msa0544600:CDS
AATAATGGGCAAACTATCGG+CGG 0.719527 4_1:-33440952 None:intergenic
GCACTTCCATGCAAAAGACG+AGG 0.722126 4_1:-33440842 None:intergenic
ACATAAATAATATCGTCACG+TGG 0.739907 4_1:-33440648 None:intergenic
TCTGAGATGATGATCCTCTG+TGG 0.740716 4_1:+33438080 Msa0544600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATAATATTATAAAA+AGG - chr4_1:33432839-33432858 None:intergenic 0.0%
!!! TTATTTTATTTTTAATATAT+TGG + chr4_1:33439127-33439146 Msa0544600:intron 0.0%
!!! AACTTGATTTAAAAATTTTT+GGG - chr4_1:33432650-33432669 None:intergenic 10.0%
!!! AAACTTGATTTAAAAATTTT+TGG - chr4_1:33432651-33432670 None:intergenic 10.0%
!!! AAATTTTTAAATCAAGTTTT+TGG + chr4_1:33432652-33432671 Msa0544600:intron 10.0%
!! AAATAAAATAGTTCAAATAA+GGG - chr4_1:33432806-33432825 None:intergenic 10.0%
!! TAAATAAAATAGTTCAAATA+AGG - chr4_1:33432807-33432826 None:intergenic 10.0%
!!! TTTTGAATTTTTTGTAAATT+GGG + chr4_1:33433284-33433303 Msa0544600:intron 10.0%
!!! ATTATGTAACTTATTTTAAT+CGG + chr4_1:33433763-33433782 Msa0544600:intron 10.0%
!!! TAAATATGAATTTCTTTTAA+TGG - chr4_1:33435157-33435176 None:intergenic 10.0%
!! AAAAGAAATTCATATTTAAA+TGG + chr4_1:33435159-33435178 Msa0544600:intron 10.0%
!!! TATTTGTTAATAAAATGTTA+GGG - chr4_1:33435884-33435903 None:intergenic 10.0%
!!! TTATTTGTTAATAAAATGTT+AGG - chr4_1:33435885-33435904 None:intergenic 10.0%
!!! TTAAATTTATTTTAACTTGA+AGG + chr4_1:33436346-33436365 Msa0544600:intron 10.0%
!!! ATCTATGATTATATTTTTAT+AGG + chr4_1:33436946-33436965 Msa0544600:intron 10.0%
!! ATTTGTGATTATAATAATTT+AGG + chr4_1:33437182-33437201 Msa0544600:intron 10.0%
!!! TCTTAAAATTTTATTATTCT+CGG + chr4_1:33437483-33437502 Msa0544600:intron 10.0%
!! AATGTAAAGTGATTTATATT+TGG + chr4_1:33429717-33429736 Msa0544600:intron 15.0%
!! TGGATTTAACAATAAATTTA+AGG + chr4_1:33429757-33429776 Msa0544600:intron 15.0%
!!! TTTTTTTTTCAGATTATCAA+TGG - chr4_1:33430515-33430534 None:intergenic 15.0%
!! GAAAAATATGTAACATAAAT+AGG + chr4_1:33430830-33430849 Msa0544600:intron 15.0%
!!! ACTATCTTAATTTTATTTGT+TGG + chr4_1:33431317-33431336 Msa0544600:intron 15.0%
!!! GAAAAGAATACATTTTTTTA+TGG - chr4_1:33432270-33432289 None:intergenic 15.0%
!! AAATATTTACATATATGCTT+GGG - chr4_1:33432706-33432725 None:intergenic 15.0%
!! AAAATATTTACATATATGCT+TGG - chr4_1:33432707-33432726 None:intergenic 15.0%
!! AATAAAATAGTTCAAATAAG+GGG - chr4_1:33432805-33432824 None:intergenic 15.0%
!!! TTGTAAATTTTTTTTGATCA+TGG + chr4_1:33433015-33433034 Msa0544600:intron 15.0%
!! AAAATAACAAAAATAATGCA+AGG - chr4_1:33433258-33433277 None:intergenic 15.0%
!! ATTTACAAAAAATTCAAAAC+AGG - chr4_1:33433283-33433302 None:intergenic 15.0%
!!! GTTTTGAATTTTTTGTAAAT+TGG + chr4_1:33433283-33433302 Msa0544600:intron 15.0%
!!! AAGTTACATAATTTAATTTG+TGG - chr4_1:33433755-33433774 None:intergenic 15.0%
!!! TTAAATCAACTTTTAACTAT+TGG - chr4_1:33435111-33435130 None:intergenic 15.0%
!! AAAGTAAATCCTATTATAAA+AGG + chr4_1:33436850-33436869 Msa0544600:intron 15.0%
!! AAGTAAATCCTATTATAAAA+GGG + chr4_1:33436851-33436870 Msa0544600:intron 15.0%
!!! TATGATTATATTTTTATAGG+TGG + chr4_1:33436949-33436968 Msa0544600:intron 15.0%
!!! TTAGGTTTTTAATGTTATTA+TGG + chr4_1:33437200-33437219 Msa0544600:intron 15.0%
!! AAATTACATAATATTCTTGT+TGG - chr4_1:33437427-33437446 None:intergenic 15.0%
!!! AATAAAATTTTAAGATCCAT+GGG - chr4_1:33437478-33437497 None:intergenic 15.0%
!!! TAATAAAATTTTAAGATCCA+TGG - chr4_1:33437479-33437498 None:intergenic 15.0%
!!! ATTAATATTTAAGACTTTAC+TGG + chr4_1:33438745-33438764 Msa0544600:intron 15.0%
!!! TTAATATTTAAGACTTTACT+GGG + chr4_1:33438746-33438765 Msa0544600:intron 15.0%
!! AAATTAATCAAAATATAGCA+TGG - chr4_1:33438913-33438932 None:intergenic 15.0%
!! CTACATAATAACATAATATT+TGG + chr4_1:33440164-33440183 Msa0544600:intron 15.0%
!! AATAACATAATATTTGGTTA+TGG + chr4_1:33440170-33440189 Msa0544600:intron 15.0%
!!! AATTTTCATTTGTTATTACT+AGG + chr4_1:33440395-33440414 Msa0544600:intron 15.0%
!! CATCTTAAAAAGTTAATAAT+GGG - chr4_1:33440969-33440988 None:intergenic 15.0%
!! AAAATAAGTTCAATCCAAAT+GGG - chr4_1:33429408-33429427 None:intergenic 20.0%
!! AGTTTATGAAAAAACAACTT+AGG + chr4_1:33429495-33429514 Msa0544600:intron 20.0%
!! TAACATAAATAGGTGTATAT+TGG + chr4_1:33430840-33430859 Msa0544600:intron 20.0%
!! TAATGTACTTGAAATTTGAA+AGG + chr4_1:33430875-33430894 Msa0544600:intron 20.0%
!! AATGTACTTGAAATTTGAAA+GGG + chr4_1:33430876-33430895 Msa0544600:intron 20.0%
!! TTATTAGTTGTTCAAAACAA+CGG + chr4_1:33430953-33430972 Msa0544600:intron 20.0%
!!! TATTTTCTGCAATAATGTTT+TGG + chr4_1:33431245-33431264 Msa0544600:intron 20.0%
!!! TGAAAACATTGATTTTTTCA+AGG - chr4_1:33432159-33432178 None:intergenic 20.0%
!!! ATTTTGTATCTATTTGACAT+TGG - chr4_1:33432330-33432349 None:intergenic 20.0%
!!! ATCTAAGACTTATCTTAAAT+AGG - chr4_1:33432362-33432381 None:intergenic 20.0%
!! ATATAAAACTAAGAGAAACA+TGG - chr4_1:33432566-33432585 None:intergenic 20.0%
!! TAATCCATAACAATAGATAA+AGG + chr4_1:33432731-33432750 Msa0544600:intron 20.0%
!! AATCCATAACAATAGATAAA+GGG + chr4_1:33432732-33432751 Msa0544600:intron 20.0%
!! AAATTTAGATCCCATTAAAT+AGG + chr4_1:33432870-33432889 Msa0544600:intron 20.0%
!!! TATTCAAGTTTGAAGATATT+AGG + chr4_1:33433133-33433152 Msa0544600:intron 20.0%
!!! ACTCTAAAATTGCTAAAATA+AGG - chr4_1:33433216-33433235 None:intergenic 20.0%
!!! TTGTGCCTTTATTTTTAAAA+AGG + chr4_1:33433375-33433394 Msa0544600:intron 20.0%
!!! ACCTTCCTTTTTAAAAATAA+AGG - chr4_1:33433383-33433402 None:intergenic 20.0%
!!! TTTTGATTTTTTGTTCTATG+TGG + chr4_1:33433646-33433665 Msa0544600:CDS 20.0%
!! TTAGAATTATTTAATACACG+TGG + chr4_1:33434400-33434419 Msa0544600:intron 20.0%
!! TCATATATTGCTAAGATAAA+GGG + chr4_1:33434591-33434610 Msa0544600:intron 20.0%
!! TTTAAACTTTATAAGTTGCA+TGG + chr4_1:33434696-33434715 Msa0544600:intron 20.0%
!!! AAAGAGTTTAAAACTAAACT+AGG + chr4_1:33434904-33434923 Msa0544600:intron 20.0%
!! TAACGAATAAACAACAAATA+TGG - chr4_1:33435247-33435266 None:intergenic 20.0%
!! TTAAAGTTGAATGTTTAAAC+TGG + chr4_1:33435301-33435320 Msa0544600:intron 20.0%
!!! TATTTCAAAATTTTCATGCT+TGG - chr4_1:33435357-33435376 None:intergenic 20.0%
!!! TTAATTGTTGGAATTTTAGT+GGG - chr4_1:33435487-33435506 None:intergenic 20.0%
!!! ATTAATTGTTGGAATTTTAG+TGG - chr4_1:33435488-33435507 None:intergenic 20.0%
!! AAATGTTGGAAATTAATTGT+TGG - chr4_1:33435499-33435518 None:intergenic 20.0%
!!! TGTTTTTAAATGACAAATGT+TGG - chr4_1:33435513-33435532 None:intergenic 20.0%
!!! TTATATTTCTAATGTGCTAA+TGG - chr4_1:33436294-33436313 None:intergenic 20.0%
!!! TATTACGATTTGTTGAAATT+GGG - chr4_1:33436793-33436812 None:intergenic 20.0%
!!! TTATTACGATTTGTTGAAAT+TGG - chr4_1:33436794-33436813 None:intergenic 20.0%
!!! TAATAGCTATTCTAGAATTA+AGG + chr4_1:33436811-33436830 Msa0544600:intron 20.0%
!!! AATAGCTATTCTAGAATTAA+GGG + chr4_1:33436812-33436831 Msa0544600:intron 20.0%
!! CAGAGAATATTATTAATAGA+AGG - chr4_1:33436975-33436994 None:intergenic 20.0%
!!! TTTATAATTCATAGCTTTAC+AGG + chr4_1:33437350-33437369 Msa0544600:intron 20.0%
!!! AGAATATTATGTAATTTGTC+TGG + chr4_1:33437430-33437449 Msa0544600:intron 20.0%
!!! GAATATTATGTAATTTGTCT+GGG + chr4_1:33437431-33437450 Msa0544600:intron 20.0%
!!! TTATTAGTCTCTGATATTTT+AGG + chr4_1:33437915-33437934 Msa0544600:intron 20.0%
!! ATATTATATACAACTACTTG+TGG + chr4_1:33438647-33438666 Msa0544600:intron 20.0%
!! AAAAGGATAGTAAATATTGT+TGG + chr4_1:33438675-33438694 Msa0544600:intron 20.0%
!! AATACATATGCATGTAAATA+GGG - chr4_1:33438722-33438741 None:intergenic 20.0%
!! AAATACATATGCATGTAAAT+AGG - chr4_1:33438723-33438742 None:intergenic 20.0%
!! ATATAACTCTATTAGTCAAA+TGG - chr4_1:33439870-33439889 None:intergenic 20.0%
!!! ACTATAACTTTTTTGTCAAT+TGG - chr4_1:33440007-33440026 None:intergenic 20.0%
!!! ATTGATTTTTGAATAAGACT+GGG + chr4_1:33440064-33440083 Msa0544600:intron 20.0%
!! CCATCTTAAAAAGTTAATAA+TGG - chr4_1:33440970-33440989 None:intergenic 20.0%
!!! CCATTATTAACTTTTTAAGA+TGG + chr4_1:33440967-33440986 Msa0544600:three_prime_UTR 20.0%
!! ACATTACAATATACATTCTT+GGG - chr4_1:33441174-33441193 None:intergenic 20.0%
! CAAAATAAGTTCAATCCAAA+TGG - chr4_1:33429409-33429428 None:intergenic 25.0%
! TATTAGTCATGATCTTGTTA+AGG + chr4_1:33429471-33429490 Msa0544600:intron 25.0%
! AAAAATAAGCTCAATCCAAA+CGG + chr4_1:33429597-33429616 Msa0544600:intron 25.0%
!!! TTTCACAAGCTATTTTCAAA+AGG - chr4_1:33429637-33429656 None:intergenic 25.0%
! TGGATGTATTTATGTAAAAG+TGG + chr4_1:33429737-33429756 Msa0544600:intron 25.0%
!! TAAGTGGATTTATAGAAACA+GGG + chr4_1:33429816-33429835 Msa0544600:intron 25.0%
! CATAATCATTATCCAATGTA+AGG - chr4_1:33430094-33430113 None:intergenic 25.0%
! CTTACATTGGATAATGATTA+TGG + chr4_1:33430092-33430111 Msa0544600:intron 25.0%
! GCTATATCTATAACAAGATA+AGG + chr4_1:33430186-33430205 Msa0544600:intron 25.0%
! TCTATAACAAGATAAGGTAA+TGG + chr4_1:33430192-33430211 Msa0544600:intron 25.0%
! AATAAGCTGAAAATAGTTTG+TGG + chr4_1:33430270-33430289 Msa0544600:intron 25.0%
! AAATAGTCTCACAAATGTTT+AGG + chr4_1:33430325-33430344 Msa0544600:intron 25.0%
! TCAAAAGGGTCAAATATTTA+GGG - chr4_1:33430681-33430700 None:intergenic 25.0%
!! TTCTTGTGATTTTCTCAAAA+GGG - chr4_1:33430695-33430714 None:intergenic 25.0%
!! ATTCTTGTGATTTTCTCAAA+AGG - chr4_1:33430696-33430715 None:intergenic 25.0%
! AACTTATTATGTCTCCTAAA+GGG - chr4_1:33430777-33430796 None:intergenic 25.0%
! TAACTTATTATGTCTCCTAA+AGG - chr4_1:33430778-33430797 None:intergenic 25.0%
! ATGTACTTGAAATTTGAAAG+GGG + chr4_1:33430877-33430896 Msa0544600:intron 25.0%
! ACAGAGAAAAAAAAACACAA+AGG + chr4_1:33430914-33430933 Msa0544600:intron 25.0%
! CAGAGAAAAAAAAACACAAA+GGG + chr4_1:33430915-33430934 Msa0544600:intron 25.0%
! AGAGAAAAAAAAACACAAAG+GGG + chr4_1:33430916-33430935 Msa0544600:intron 25.0%
! GCATTTAATAACAATGCAAT+AGG - chr4_1:33431564-33431583 None:intergenic 25.0%
! TTTACTATACTCGAATCTAA+AGG + chr4_1:33432067-33432086 Msa0544600:CDS 25.0%
!! TATCTATTTGACATTGGTTA+GGG - chr4_1:33432324-33432343 None:intergenic 25.0%
!! CTTTTTGAATTGTTAGAATG+GGG - chr4_1:33432439-33432458 None:intergenic 25.0%
!! GCTTTTTGAATTGTTAGAAT+GGG - chr4_1:33432440-33432459 None:intergenic 25.0%
!!! TGCTTTTTGAATTGTTAGAA+TGG - chr4_1:33432441-33432460 None:intergenic 25.0%
! ATCCATAACAATAGATAAAG+GGG + chr4_1:33432733-33432752 Msa0544600:intron 25.0%
! AAAAAAAACCAACCCAAAAA+GGG - chr4_1:33432770-33432789 None:intergenic 25.0%
! TAAAAAAAACCAACCCAAAA+AGG - chr4_1:33432771-33432790 None:intergenic 25.0%
!!! GGTGTTGTTCATATTTTAAT+GGG - chr4_1:33432947-33432966 None:intergenic 25.0%
!!! TGGTGTTGTTCATATTTTAA+TGG - chr4_1:33432948-33432967 None:intergenic 25.0%
! TATTAGGTAGATATGTATTG+AGG + chr4_1:33433149-33433168 Msa0544600:intron 25.0%
!! AAAATAAGGTGTCATACTTA+GGG - chr4_1:33433202-33433221 None:intergenic 25.0%
!! TAAAATAAGGTGTCATACTT+AGG - chr4_1:33433203-33433222 None:intergenic 25.0%
!!! TTTAGCAATTTTAGAGTATC+TGG + chr4_1:33433219-33433238 Msa0544600:intron 25.0%
! ATAACAAATTGATGAACAAC+TGG - chr4_1:33433345-33433364 None:intergenic 25.0%
!!! GCCTTTATTTTTAAAAAGGA+AGG + chr4_1:33433379-33433398 Msa0544600:intron 25.0%
!!! ATTTTTAAAAAGGAAGGTTG+AGG + chr4_1:33433385-33433404 Msa0544600:intron 25.0%
! GAAGTTTAGTAGAAAAATCA+TGG + chr4_1:33433933-33433952 Msa0544600:intron 25.0%
! AAGAACAAGAAAGTAATCTT+TGG - chr4_1:33434089-33434108 None:intergenic 25.0%
! GTAAATCTCTTGATAGATAT+TGG + chr4_1:33434182-33434201 Msa0544600:CDS 25.0%
! AAATCAAGATTGACATGTAT+AGG - chr4_1:33434214-33434233 None:intergenic 25.0%
! CTAATATTCCAAGTGATATT+AGG - chr4_1:33434522-33434541 None:intergenic 25.0%
!! TGAATATTTTATCCTTGACA+AGG + chr4_1:33434560-33434579 Msa0544600:intron 25.0%
! GTCATATATTGCTAAGATAA+AGG + chr4_1:33434590-33434609 Msa0544600:intron 25.0%
!! ATGGAATAAATGAGTGTTTT+GGG + chr4_1:33434778-33434797 Msa0544600:intron 25.0%
! AAGACAAAATAGGAAAAAGT+TGG + chr4_1:33434973-33434992 Msa0544600:intron 25.0%
! TATGATCTACTATCATTGAT+AGG - chr4_1:33435077-33435096 None:intergenic 25.0%
! ATCAATGATAGTAGATCATA+TGG + chr4_1:33435077-33435096 Msa0544600:intron 25.0%
! ATAAACAACAAATATGGAGT+TGG - chr4_1:33435241-33435260 None:intergenic 25.0%
! CATAAATATAAGATGTTTCC+AGG - chr4_1:33435691-33435710 None:intergenic 25.0%
! TTTCACATGTTTAGATTAAC+AGG + chr4_1:33435734-33435753 Msa0544600:intron 25.0%
!! GCTTACATTAGTCTATAAAA+GGG - chr4_1:33436437-33436456 None:intergenic 25.0%
!! TGCTTACATTAGTCTATAAA+AGG - chr4_1:33436438-33436457 None:intergenic 25.0%
! ACTAATGTAAGCAAATCATT+GGG + chr4_1:33436445-33436464 Msa0544600:intron 25.0%
! CTTGATAAGAGTTTATAAAG+AGG + chr4_1:33436688-33436707 Msa0544600:intron 25.0%
!!! ATTACGATTTGTTGAAATTG+GGG - chr4_1:33436792-33436811 None:intergenic 25.0%
!!! AAGGTATTCCCTTTTATAAT+AGG - chr4_1:33436862-33436881 None:intergenic 25.0%
! CTTATGTCAGATCATATATA+TGG + chr4_1:33437257-33437276 Msa0544600:intron 25.0%
! TTGAAGGAATACAAACAAAT+AGG - chr4_1:33437618-33437637 None:intergenic 25.0%
! TTCTAAATTCAAGAAACTAC+CGG - chr4_1:33437699-33437718 None:intergenic 25.0%
! TCAAATATTGCACGAATTTA+TGG + chr4_1:33437740-33437759 Msa0544600:intron 25.0%
! TCTACATAAAGGTTTATTGA+TGG - chr4_1:33438029-33438048 None:intergenic 25.0%
! AAACCTTTATGTAGAAAATC+AGG + chr4_1:33438034-33438053 Msa0544600:CDS 25.0%
! GAAAGATTTATATCTGATTG+AGG - chr4_1:33438164-33438183 None:intergenic 25.0%
! CAAAAACATATAGATAGTTC+AGG - chr4_1:33438551-33438570 None:intergenic 25.0%
!! CTGAACTATCTATATGTTTT+TGG + chr4_1:33438549-33438568 Msa0544600:intron 25.0%
! TTATATACAAATTCCTCCTA+AGG + chr4_1:33438603-33438622 Msa0544600:intron 25.0%
! CATTATCTAATTAGATCCTT+AGG - chr4_1:33438622-33438641 None:intergenic 25.0%
! AACTACTTGTGGTTATTAAA+AGG + chr4_1:33438658-33438677 Msa0544600:intron 25.0%
!! TGGTGAAAAAGTATATTCAA+CGG + chr4_1:33438695-33438714 Msa0544600:intron 25.0%
! AATCAAATATGGACTTACAT+TGG - chr4_1:33438944-33438963 None:intergenic 25.0%
! TAGAAGAAGGAAATCAAATA+TGG - chr4_1:33438955-33438974 None:intergenic 25.0%
! TATGATGAATATGTAGAAGA+AGG - chr4_1:33438968-33438987 None:intergenic 25.0%
! ATAACTGTCAATATGATATG+GGG - chr4_1:33439008-33439027 None:intergenic 25.0%
! CATAACTGTCAATATGATAT+GGG - chr4_1:33439009-33439028 None:intergenic 25.0%
! ACATAACTGTCAATATGATA+TGG - chr4_1:33439010-33439029 None:intergenic 25.0%
! ATAAAATCATGTCTTCTTCT+AGG - chr4_1:33439079-33439098 None:intergenic 25.0%
! TCACATAGCAAAATATGTAT+TGG - chr4_1:33439167-33439186 None:intergenic 25.0%
! TATGTGATTAACTTCATCTA+AGG + chr4_1:33439180-33439199 Msa0544600:intron 25.0%
! AAAATTTAAGGACTAAAGCA+CGG - chr4_1:33439440-33439459 None:intergenic 25.0%
! TGCGATCTTTCAAAAATTTA+AGG - chr4_1:33439452-33439471 None:intergenic 25.0%
! AATCTTGAGTATTATTGGAA+AGG - chr4_1:33439770-33439789 None:intergenic 25.0%
! ATGGAGTAGTTAATTAGTTA+AGG - chr4_1:33439851-33439870 None:intergenic 25.0%
!!! GATTGATTTTTGAATAAGAC+TGG + chr4_1:33440063-33440082 Msa0544600:intron 25.0%
! ACATTTATATACATGATGTC+TGG - chr4_1:33440214-33440233 None:intergenic 25.0%
! AATAGAATAACACAATTGCA+TGG - chr4_1:33440515-33440534 None:intergenic 25.0%
! TGACGATATTATTTATGTGA+AGG + chr4_1:33440653-33440672 Msa0544600:CDS 25.0%
!!! ACAACTTGTTGAAATTGAAA+AGG - chr4_1:33440701-33440720 None:intergenic 25.0%
! ATTTCAACAAGTTGTTCAAA+AGG + chr4_1:33440706-33440725 Msa0544600:three_prime_UTR 25.0%
! TTAAATACAGAAGAACTTCT+AGG - chr4_1:33440739-33440758 None:intergenic 25.0%
!!! CAGCTTTAAATGATGAATTT+TGG - chr4_1:33440884-33440903 None:intergenic 25.0%
!! AAATGAGAAAAATCTCCTTT+TGG - chr4_1:33441025-33441044 None:intergenic 25.0%
!! CTCATTTTACTGAAAATTCA+TGG + chr4_1:33441038-33441057 Msa0544600:three_prime_UTR 25.0%
! TAAAAATTGGGAATTATGAG+AGG - chr4_1:33441150-33441169 None:intergenic 25.0%
! ACATTCTTGGGATAAAAATT+GGG - chr4_1:33441162-33441181 None:intergenic 25.0%
! TACATTCTTGGGATAAAAAT+TGG - chr4_1:33441163-33441182 None:intergenic 25.0%
! CACATTACAATATACATTCT+TGG - chr4_1:33441175-33441194 None:intergenic 25.0%
! TAACGGAAACTATTTTCTTG+CGG - chr4_1:33429168-33429187 None:intergenic 30.0%
!! TGAAGATGAAGAAGCATTAA+CGG - chr4_1:33429185-33429204 None:intergenic 30.0%
! GTATCTTTTTGCAAAGGAAA+TGG - chr4_1:33429224-33429243 None:intergenic 30.0%
! GCATTAGTATCTTTTTGCAA+AGG - chr4_1:33429230-33429249 None:intergenic 30.0%
AAAGATACTAATGCACTGTT+TGG + chr4_1:33429236-33429255 Msa0544600:intron 30.0%
ACTTATCATGATAAGCATGT+AGG - chr4_1:33429288-33429307 None:intergenic 30.0%
AAAATAAGCTCAATCCAAAC+GGG + chr4_1:33429598-33429617 Msa0544600:intron 30.0%
!!! TTTTCAAAAGGTATCACATG+CGG - chr4_1:33429625-33429644 None:intergenic 30.0%
! CACTTAGAATTTGTAGCTTT+TGG - chr4_1:33429802-33429821 None:intergenic 30.0%
CAAAAGCTACAAATTCTAAG+TGG + chr4_1:33429800-33429819 Msa0544600:intron 30.0%
! CTAAGTGGATTTATAGAAAC+AGG + chr4_1:33429815-33429834 Msa0544600:intron 30.0%
AAATGAAGAATGCCTTACTT+AGG - chr4_1:33429842-33429861 None:intergenic 30.0%
!! AATTTGTTACAAGAAATGCG+TGG + chr4_1:33429870-33429889 Msa0544600:intron 30.0%
!!! TTTTTTGAGAGTCCTTACAT+TGG + chr4_1:33430079-33430098 Msa0544600:intron 30.0%
TTGGATAATGATTATGGACA+TGG + chr4_1:33430098-33430117 Msa0544600:intron 30.0%
GCTGTATTCATAAGCTATTA+TGG + chr4_1:33430234-33430253 Msa0544600:intron 30.0%
AAATGTTTAGGCTCTTTAAG+AGG + chr4_1:33430337-33430356 Msa0544600:intron 30.0%
CTCTGCATTTATAAGCTATA+AGG + chr4_1:33430454-33430473 Msa0544600:intron 30.0%
!!! TACATGTGTAAGTGTTGTTT+TGG + chr4_1:33430555-33430574 Msa0544600:intron 30.0%
! ACACTTTTAATCTGTAGTGT+TGG + chr4_1:33430593-33430612 Msa0544600:intron 30.0%
CAAAAGGGTCAAATATTTAG+GGG - chr4_1:33430680-33430699 None:intergenic 30.0%
CTCAAAAGGGTCAAATATTT+AGG - chr4_1:33430682-33430701 None:intergenic 30.0%
! GTTTTACAAGTTTACCCTTT+AGG + chr4_1:33430760-33430779 Msa0544600:intron 30.0%
CATAGATTTAATTGCAGCAA+AGG + chr4_1:33430983-33431002 Msa0544600:intron 30.0%
TACAGAAATACAGTCAAAAC+AGG + chr4_1:33431117-33431136 Msa0544600:intron 30.0%
!! TATATCATGACTTTTTCCTC+CGG - chr4_1:33431147-33431166 None:intergenic 30.0%
!! TTATTTTATCCTCCTCCTTT+TGG + chr4_1:33431196-33431215 Msa0544600:intron 30.0%
GTTAAAACAGCAAAACCAAA+AGG - chr4_1:33431214-33431233 None:intergenic 30.0%
TAAGATAGTAACCAAAGCAA+TGG - chr4_1:33431306-33431325 None:intergenic 30.0%
TTTGTTGAAACAGCATAATG+CGG + chr4_1:33431508-33431527 Msa0544600:intron 30.0%
TTCTTCAGCACAAAAAATCA+AGG - chr4_1:33431621-33431640 None:intergenic 30.0%
!!! TGATTTTTTGTGCTGAAGAA+TGG + chr4_1:33431621-33431640 Msa0544600:intron 30.0%
! ACAATATATGTCACTTGTTG+TGG - chr4_1:33431666-33431685 None:intergenic 30.0%
TTCTTACTGTAACTAAGTAC+TGG + chr4_1:33431805-33431824 Msa0544600:intron 30.0%
AAGCAAATTCAAGTAGTGAT+GGG - chr4_1:33431847-33431866 None:intergenic 30.0%
! TAACTTGTATATGCTCTTTG+AGG + chr4_1:33432194-33432213 Msa0544600:intron 30.0%
! GTATCTATTTGACATTGGTT+AGG - chr4_1:33432325-33432344 None:intergenic 30.0%
AACATGGTTATGAGATAGTA+GGG - chr4_1:33432550-33432569 None:intergenic 30.0%
AAACATGGTTATGAGATAGT+AGG - chr4_1:33432551-33432570 None:intergenic 30.0%
ATCCCCTTTATCTATTGTTA+TGG - chr4_1:33432738-33432757 None:intergenic 30.0%
AAAAAAACCAACCCAAAAAG+GGG - chr4_1:33432769-33432788 None:intergenic 30.0%
GTTCAAATAAGGGGTAAATT+TGG - chr4_1:33432796-33432815 None:intergenic 30.0%
ATCCCATTAAATAGGAACAA+TGG + chr4_1:33432878-33432897 Msa0544600:intron 30.0%
TGCCATTGTTCCTATTTAAT+GGG - chr4_1:33432883-33432902 None:intergenic 30.0%
CAATATTGTTCGTATTGTAG+TGG - chr4_1:33432968-33432987 None:intergenic 30.0%
AATTAAGCACAGTAGAAAAG+CGG + chr4_1:33433071-33433090 Msa0544600:intron 30.0%
AAAATAATGCAAGGCTATCT+AGG - chr4_1:33433249-33433268 None:intergenic 30.0%
TTGGCTTCAAATAACTGATT+TGG - chr4_1:33433313-33433332 None:intergenic 30.0%
CTTGTATAAGTGATGAACAA+AGG + chr4_1:33433585-33433604 Msa0544600:CDS 30.0%
GAGACAAAATATTACTATCC+CGG - chr4_1:33433618-33433637 None:intergenic 30.0%
TCAAATTCCTAAGCATAACA+CGG - chr4_1:33433799-33433818 None:intergenic 30.0%
TTAGGAATTTGATCAAGTAC+AGG + chr4_1:33433807-33433826 Msa0544600:intron 30.0%
TAGAAAAATCATGGAGTATG+AGG + chr4_1:33433942-33433961 Msa0544600:intron 30.0%
AGAAAAATCATGGAGTATGA+GGG + chr4_1:33433943-33433962 Msa0544600:intron 30.0%
GATCTCATCTAGTTAAAGTT+TGG + chr4_1:33434017-33434036 Msa0544600:intron 30.0%
ATTATCCATCTCTAGATAGT+AGG + chr4_1:33434048-33434067 Msa0544600:intron 30.0%
TTGCAGATACTAAAGGAAAT+GGG + chr4_1:33434134-33434153 Msa0544600:CDS 30.0%
ACAAAATATCATGCAGACAT+AGG - chr4_1:33434429-33434448 None:intergenic 30.0%
! GCATGATATTTTGTTACACT+TGG + chr4_1:33434435-33434454 Msa0544600:intron 30.0%
! CAAGTGATATTAGGTTTTCA+AGG - chr4_1:33434513-33434532 None:intergenic 30.0%
CTTGAAAACCTAATATCACT+TGG + chr4_1:33434511-33434530 Msa0544600:intron 30.0%
! TTTTCCAGTTAAGTATGACA+AGG + chr4_1:33434727-33434746 Msa0544600:intron 30.0%
ATTTCCTTGTCATACTTAAC+TGG - chr4_1:33434734-33434753 None:intergenic 30.0%
AATAAGAGATGTATTCAAGC+AGG + chr4_1:33434751-33434770 Msa0544600:intron 30.0%
ATAAGAGATGTATTCAAGCA+GGG + chr4_1:33434752-33434771 Msa0544600:intron 30.0%
! GATGGAATAAATGAGTGTTT+TGG + chr4_1:33434777-33434796 Msa0544600:intron 30.0%
GAATGTTACAATGTATGAGA+GGG + chr4_1:33434946-33434965 Msa0544600:intron 30.0%
AATGTTACAATGTATGAGAG+GGG + chr4_1:33434947-33434966 Msa0544600:intron 30.0%
CTACCATCTTATCCATAATA+GGG - chr4_1:33435006-33435025 None:intergenic 30.0%
TCTACCATCTTATCCATAAT+AGG - chr4_1:33435007-33435026 None:intergenic 30.0%
AACACAATCAAACTTCCTAA+GGG - chr4_1:33435035-33435054 None:intergenic 30.0%
TATTCGTTACTGTACAAAGT+TGG + chr4_1:33435258-33435277 Msa0544600:intron 30.0%
AGTTGAATGTTTAAACTGGT+AGG + chr4_1:33435305-33435324 Msa0544600:intron 30.0%
AGGATGTAAGATAAGATATC+TGG - chr4_1:33435381-33435400 None:intergenic 30.0%
CATATACACTATAAAGTGGT+AGG - chr4_1:33435545-33435564 None:intergenic 30.0%
GGTACATATACACTATAAAG+TGG - chr4_1:33435549-33435568 None:intergenic 30.0%
TTCTTCCTTAACGTTCTTAA+TGG + chr4_1:33436069-33436088 Msa0544600:intron 30.0%
AACATAGAATATGTAGCAGT+GGG - chr4_1:33436136-33436155 None:intergenic 30.0%
AAACATAGAATATGTAGCAG+TGG - chr4_1:33436137-33436156 None:intergenic 30.0%
!!! AATTGAGGTCTGTACTTTTT+TGG - chr4_1:33436411-33436430 None:intergenic 30.0%
! TCTATAAAAGGGTGTAATTG+AGG - chr4_1:33436426-33436445 None:intergenic 30.0%
GACTAATGTAAGCAAATCAT+TGG + chr4_1:33436444-33436463 Msa0544600:intron 30.0%
CATAAGAGTTTATAAAGACG+AGG + chr4_1:33436504-33436523 Msa0544600:intron 30.0%
TCTGATACCTTGTTGAAATT+GGG - chr4_1:33436573-33436592 None:intergenic 30.0%
! TTTTATGGATGAAACAGGAA+AGG - chr4_1:33436881-33436900 None:intergenic 30.0%
! ATATTTCCTGTGGCTTTTTA+TGG - chr4_1:33436896-33436915 None:intergenic 30.0%
CAATGTTTCAATATTTCCTG+TGG - chr4_1:33436906-33436925 None:intergenic 30.0%
TCATATGTTAACATGTACGT+TGG - chr4_1:33437045-33437064 None:intergenic 30.0%
! TGAACTTAGAATTTTGTCTG+AGG + chr4_1:33437107-33437126 Msa0544600:CDS 30.0%
! AATCACCTCTTTTACCAAAA+GGG - chr4_1:33437237-33437256 None:intergenic 30.0%
TGTTGGATGATTTAAGTAAC+AGG - chr4_1:33437410-33437429 None:intergenic 30.0%
! AGCTATCTAAAGTGATTTGA+AGG - chr4_1:33437634-33437653 None:intergenic 30.0%
! TCAAAAGTATATTGTCTGAG+AGG + chr4_1:33437673-33437692 Msa0544600:intron 30.0%
!!! AATAGTTTTAGCTGAATGCT+TGG + chr4_1:33437778-33437797 Msa0544600:intron 30.0%
!!! ATAGTTTTAGCTGAATGCTT+GGG + chr4_1:33437779-33437798 Msa0544600:intron 30.0%
TATCTAATTAGATCCTTAGG+AGG - chr4_1:33438619-33438638 None:intergenic 30.0%
! GATATGGGGTATATATTTTC+AGG - chr4_1:33438994-33439013 None:intergenic 30.0%
! AGATGTTTTTCTGTCTGTTT+TGG + chr4_1:33439215-33439234 Msa0544600:intron 30.0%
!! TTTGTTTTTCCTGCAGATAA+AGG + chr4_1:33439254-33439273 Msa0544600:intron 30.0%
AGTATTCTAGTATCCAGTAA+CGG - chr4_1:33439389-33439408 None:intergenic 30.0%
AGCATATAAAACATCTAGAC+AGG + chr4_1:33439575-33439594 Msa0544600:intron 30.0%
AATAGTTGTACTTATACCAG+TGG + chr4_1:33439664-33439683 Msa0544600:intron 30.0%
ATAGTTGTACTTATACCAGT+GGG + chr4_1:33439665-33439684 Msa0544600:intron 30.0%
GATAGGTTACAAATAATGAG+TGG - chr4_1:33439808-33439827 None:intergenic 30.0%
AGTTAAGGAATTAGTCAAAG+TGG - chr4_1:33439836-33439855 None:intergenic 30.0%
CTAAATATTAGTTGTGTCGA+TGG + chr4_1:33439902-33439921 Msa0544600:intron 30.0%
! AGTTGAATACTGTTTTCACT+AGG + chr4_1:33439965-33439984 Msa0544600:intron 30.0%
ATCAATTAAGTGGAAATCAC+TGG - chr4_1:33440243-33440262 None:intergenic 30.0%
AGTGATTTCCACTTAATTGA+TGG + chr4_1:33440242-33440261 Msa0544600:intron 30.0%
!! ACTAAAGCATCGAGTTATTA+AGG - chr4_1:33440291-33440310 None:intergenic 30.0%
GGAAAGCTAAATTGAGATAT+AGG - chr4_1:33440314-33440333 None:intergenic 30.0%
ACATAAATAATATCGTCACG+TGG - chr4_1:33440651-33440670 None:intergenic 30.0%
CGATATTATTTATGTGAAGG+AGG + chr4_1:33440656-33440675 Msa0544600:CDS 30.0%
!! GTTAATAATGGGCAAACTAT+CGG - chr4_1:33440958-33440977 None:intergenic 30.0%
! TTTAAGATGGTCTCTAATAG+AGG + chr4_1:33440980-33440999 Msa0544600:three_prime_UTR 30.0%
ATTCATTAGATGTTAGAGAG+TGG + chr4_1:33441110-33441129 Msa0544600:three_prime_UTR 30.0%
TTCATTAGATGTTAGAGAGT+GGG + chr4_1:33441111-33441130 Msa0544600:three_prime_UTR 30.0%
AATATTTGTCTCGATCATAG+TGG + chr4_1:33441251-33441270 Msa0544600:three_prime_UTR 30.0%
! GAGGAGACATTTTCATTAAA+TGG + chr4_1:33441279-33441298 Msa0544600:three_prime_UTR 30.0%
!!! TCGTTCTTCTTTTTTATCCT+TGG - chr4_1:33441328-33441347 None:intergenic 30.0%
AGAAGGTTTCAGAGTTTCAT+TGG - chr4_1:33428927-33428946 None:intergenic 35.0%
!! AACTCTGAAACCTTCTTCAA+TGG + chr4_1:33428931-33428950 Msa0544600:exon 35.0%
AAATAAGCTCAATCCAAACG+GGG + chr4_1:33429599-33429618 Msa0544600:intron 35.0%
!!! TAAGCTCTGTTTTTGTTCTC+CGG + chr4_1:33429664-33429683 Msa0544600:intron 35.0%
TCAAAATCAATTCAGCTCAC+CGG - chr4_1:33429686-33429705 None:intergenic 35.0%
!! AATTTCTAGCACATGCTTTG+TGG + chr4_1:33429964-33429983 Msa0544600:intron 35.0%
ATTATGGACATGGTCTGATA+AGG + chr4_1:33430108-33430127 Msa0544600:intron 35.0%
!! AGATAAGGTAATGGACAAAC+TGG + chr4_1:33430201-33430220 Msa0544600:intron 35.0%
!! GATAAGGTAATGGACAAACT+GGG + chr4_1:33430202-33430221 Msa0544600:intron 35.0%
CAGATTATCAATGGTGTCTA+CGG - chr4_1:33430506-33430525 None:intergenic 35.0%
!!! TGTAAGTGTTGTTTTGGTGT+TGG + chr4_1:33430561-33430580 Msa0544600:intron 35.0%
!! CTTTTAATCTGTAGTGTTGG+TGG + chr4_1:33430596-33430615 Msa0544600:intron 35.0%
TTGAAAGGGGACTTATAGAA+AGG + chr4_1:33430890-33430909 Msa0544600:intron 35.0%
!! AATTGCAGCAAAGGTTTTGA+AGG + chr4_1:33430992-33431011 Msa0544600:intron 35.0%
TACAGCATTGTGACTGTAAT+TGG + chr4_1:33431022-33431041 Msa0544600:intron 35.0%
ACAGCATTGTGACTGTAATT+GGG + chr4_1:33431023-33431042 Msa0544600:intron 35.0%
TACAGTCAAAACAGGTTATC+CGG + chr4_1:33431125-33431144 Msa0544600:intron 35.0%
AAAACAGCAAAACCAAAAGG+AGG - chr4_1:33431211-33431230 None:intergenic 35.0%
TCTCTGATTGTTAAAACAGC+AGG - chr4_1:33431274-33431293 None:intergenic 35.0%
! GAGACTATTTTCCATTGCTT+TGG + chr4_1:33431292-33431311 Msa0544600:intron 35.0%
!! TATTTGTTGGTTTGACAGCA+CGG + chr4_1:33431330-33431349 Msa0544600:intron 35.0%
! CAAAAGCAAACCTTTTTGCA+AGG - chr4_1:33431401-33431420 None:intergenic 35.0%
!! CTTGCAAAAAGGTTTGCTTT+TGG + chr4_1:33431399-33431418 Msa0544600:CDS 35.0%
CATAATGCGGCATGTTAAAT+AGG + chr4_1:33431521-33431540 Msa0544600:intron 35.0%
TAAATAGGTTGCTAGGTGTT+TGG + chr4_1:33431536-33431555 Msa0544600:intron 35.0%
AAATAGGTTGCTAGGTGTTT+GGG + chr4_1:33431537-33431556 Msa0544600:intron 35.0%
CAAGTGACATATATTGTTCC+CGG + chr4_1:33431669-33431688 Msa0544600:CDS 35.0%
TTGGTCAAAATTGGATATGC+CGG - chr4_1:33431691-33431710 None:intergenic 35.0%
GATATCTGCTTGGTCAAAAT+TGG - chr4_1:33431700-33431719 None:intergenic 35.0%
CAAAATGTGTGATATCTGCT+TGG - chr4_1:33431710-33431729 None:intergenic 35.0%
! ACATTTTGTTCAGAAAGCTC+AGG + chr4_1:33431722-33431741 Msa0544600:CDS 35.0%
GTTACAGTAAGAAGAGAGAA+AGG - chr4_1:33431798-33431817 None:intergenic 35.0%
CAAGCAAATTCAAGTAGTGA+TGG - chr4_1:33431848-33431867 None:intergenic 35.0%
! CATCACTACTTGAATTTGCT+TGG + chr4_1:33431846-33431865 Msa0544600:CDS 35.0%
ATTCAGTCCAGAGATCATAT+TGG - chr4_1:33431929-33431948 None:intergenic 35.0%
CCAAAAATTATCTGCAGAAC+AGG - chr4_1:33431986-33432005 None:intergenic 35.0%
! CCTGTTCTGCAGATAATTTT+TGG + chr4_1:33431983-33432002 Msa0544600:intron 35.0%
GCTGTAGCAGTTAAAGAAAT+CGG + chr4_1:33432490-33432509 Msa0544600:intron 35.0%
GTAAAAGACCCATTTGATGA+TGG - chr4_1:33432522-33432541 None:intergenic 35.0%
ACAATAGATAAAGGGGATTG+TGG + chr4_1:33432740-33432759 Msa0544600:intron 35.0%
! GTGCCATTGTTCCTATTTAA+TGG - chr4_1:33432884-33432903 None:intergenic 35.0%
AGGAACAATGGCACTAAAAT+AGG + chr4_1:33432890-33432909 Msa0544600:intron 35.0%
TATTCGTAGAAAGGTTGCAA+AGG + chr4_1:33433412-33433431 Msa0544600:CDS 35.0%
AGCAATAGCAACAAAATCAC+TGG + chr4_1:33433706-33433725 Msa0544600:intron 35.0%
GCAATAGCAACAAAATCACT+GGG + chr4_1:33433707-33433726 Msa0544600:intron 35.0%
GTAAGAACAGAACATTATCG+TGG - chr4_1:33433849-33433868 None:intergenic 35.0%
! GATTCAGTTGTCTTTTTGCT+CGG + chr4_1:33433911-33433930 Msa0544600:intron 35.0%
ACTAGATGAGATCAACTACA+GGG - chr4_1:33434010-33434029 None:intergenic 35.0%
AACTAGATGAGATCAACTAC+AGG - chr4_1:33434011-33434030 None:intergenic 35.0%
TTTAGTATCTGCAAGAAGCA+TGG - chr4_1:33434128-33434147 None:intergenic 35.0%
ATGCTTCTTGCAGATACTAA+AGG + chr4_1:33434127-33434146 Msa0544600:CDS 35.0%
CTTGCAGATACTAAAGGAAA+TGG + chr4_1:33434133-33434152 Msa0544600:CDS 35.0%
CAAATAAAAATCACCTCGTC+TGG - chr4_1:33434316-33434335 None:intergenic 35.0%
CTTCTAATAGTTCCTATGTC+TGG + chr4_1:33434365-33434384 Msa0544600:intron 35.0%
GTGATAAAGAATCCAGACAT+AGG - chr4_1:33434380-33434399 None:intergenic 35.0%
ATGACATCATAACCTTGTCA+AGG - chr4_1:33434575-33434594 None:intergenic 35.0%
ATTGTACAACTATATCCCCT+AGG + chr4_1:33434847-33434866 Msa0544600:intron 35.0%
CGAATGTTACAATGTATGAG+AGG + chr4_1:33434945-33434964 Msa0544600:intron 35.0%
GTACCCTATTATGGATAAGA+TGG + chr4_1:33435000-33435019 Msa0544600:intron 35.0%
GAACACAATCAAACTTCCTA+AGG - chr4_1:33435036-33435055 None:intergenic 35.0%
ATCATTGATAGGCCATCAAT+AGG - chr4_1:33435066-33435085 None:intergenic 35.0%
CACTAGACGTTGTTTGTAAT+TGG + chr4_1:33435187-33435206 Msa0544600:intron 35.0%
CAAATATGGAGTTGGAGATA+TGG - chr4_1:33435233-33435252 None:intergenic 35.0%
TTACTGTACAAAGTTGGAAG+AGG + chr4_1:33435264-33435283 Msa0544600:intron 35.0%
AATGTTTAAACTGGTAGGTG+TGG + chr4_1:33435310-33435329 Msa0544600:intron 35.0%
TTATCGCTCAGTAGGATATT+AGG - chr4_1:33435401-33435420 None:intergenic 35.0%
TAATATCCTACTGAGCGATA+AGG + chr4_1:33435400-33435419 Msa0544600:intron 35.0%
AGATGTTTCCAGGTAACAAT+CGG - chr4_1:33435681-33435700 None:intergenic 35.0%
ATCAGCTTCATCAACATCAA+TGG - chr4_1:33435788-33435807 None:intergenic 35.0%
!!! GTGTTGCTCCATTGATTTTA+AGG + chr4_1:33435857-33435876 Msa0544600:intron 35.0%
GTTAGGGTCCTTAAAATCAA+TGG - chr4_1:33435868-33435887 None:intergenic 35.0%
AGTGCAACAAAGTTACAAGA+TGG + chr4_1:33435927-33435946 Msa0544600:CDS 35.0%
CAACAAAGTTACAAGATGGT+CGG + chr4_1:33435931-33435950 Msa0544600:CDS 35.0%
AAGATGGTCGGATTAACATT+TGG + chr4_1:33435943-33435962 Msa0544600:CDS 35.0%
! AAGTATTGTGGATAGGTATG+TGG + chr4_1:33436004-33436023 Msa0544600:intron 35.0%
TTTCCAGAAAATCTTGCCAT+GGG + chr4_1:33436154-33436173 Msa0544600:CDS 35.0%
AACTTGAAGGAGAGAAAAGA+TGG + chr4_1:33436359-33436378 Msa0544600:intron 35.0%
GAATCCTATCTATCCAATGT+GGG - chr4_1:33436482-33436501 None:intergenic 35.0%
AGAATCCTATCTATCCAATG+TGG - chr4_1:33436483-33436502 None:intergenic 35.0%
CTGATACCTTGTTGAAATTG+GGG - chr4_1:33436572-33436591 None:intergenic 35.0%
CTCTGATACCTTGTTGAAAT+TGG - chr4_1:33436574-33436593 None:intergenic 35.0%
ATCTATCCAATGTGAGACTT+GGG - chr4_1:33436662-33436681 None:intergenic 35.0%
TATCTATCCAATGTGAGACT+TGG - chr4_1:33436663-33436682 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr4_1:33436768-33436787 None:intergenic 35.0%
! TGGCTTTTTATGGATGAAAC+AGG - chr4_1:33436886-33436905 None:intergenic 35.0%
TTTCATCCATAAAAAGCCAC+AGG + chr4_1:33436887-33436906 Msa0544600:intron 35.0%
ACTCAATTTGAACCTTGAAG+AGG + chr4_1:33437080-33437099 Msa0544600:CDS 35.0%
CTGCAAATCTTCGGTTAAAT+TGG + chr4_1:33437130-33437149 Msa0544600:CDS 35.0%
! TGGTTTTTCTGTATCCCTTT+TGG + chr4_1:33437220-33437239 Msa0544600:intron 35.0%
! TGTATCCCTTTTGGTAAAAG+AGG + chr4_1:33437229-33437248 Msa0544600:intron 35.0%
! GAATCACCTCTTTTACCAAA+AGG - chr4_1:33437238-33437257 None:intergenic 35.0%
GCAATCACACTATTGTAAAC+TGG + chr4_1:33437564-33437583 Msa0544600:intron 35.0%
AATATTTGACTCCACGCATT+GGG - chr4_1:33437729-33437748 None:intergenic 35.0%
CACAAGTCAGAATGTCATTA+AGG - chr4_1:33437845-33437864 None:intergenic 35.0%
! CTTAATGACATTCTGACTTG+TGG + chr4_1:33437843-33437862 Msa0544600:intron 35.0%
! TAAAGGTTTATTGATGGCTC+TGG - chr4_1:33438023-33438042 None:intergenic 35.0%
! CTGCCTGATTTTCTACATAA+AGG - chr4_1:33438040-33438059 None:intergenic 35.0%
CTATAGCTACATTTGGATCT+CGG + chr4_1:33438108-33438127 Msa0544600:CDS 35.0%
ATAACATTCCTTTACCCTAC+AGG + chr4_1:33438132-33438151 Msa0544600:CDS 35.0%
TAACATTCCTTTACCCTACA+GGG + chr4_1:33438133-33438152 Msa0544600:CDS 35.0%
! AATTTTCCCATCTTCCAGAA+GGG + chr4_1:33438186-33438205 Msa0544600:CDS 35.0%
GAGGTAAATTGAACATAACC+AGG - chr4_1:33438299-33438318 None:intergenic 35.0%
CAAGAAGGTCCAAATATCTA+CGG - chr4_1:33438328-33438347 None:intergenic 35.0%
! ATACCTGATAATGAGCAAGA+AGG - chr4_1:33438343-33438362 None:intergenic 35.0%
!!! AACTTTTAGTTCCCTTCACA+AGG + chr4_1:33438494-33438513 Msa0544600:intron 35.0%
!!! ACTTTTAGTTCCCTTCACAA+GGG + chr4_1:33438495-33438514 Msa0544600:intron 35.0%
CAAATATGGACTTACATTGG+TGG - chr4_1:33438941-33438960 None:intergenic 35.0%
! TATGTATTGGTGTGAGTATG+AGG - chr4_1:33439154-33439173 None:intergenic 35.0%
TAAGAAATGCCTTTATCTGC+AGG - chr4_1:33439266-33439285 None:intergenic 35.0%
!! CAGATAAAGGCATTTCTTAG+AGG + chr4_1:33439267-33439286 Msa0544600:intron 35.0%
TCGAGATTACCAGATGTAAA+GGG - chr4_1:33439303-33439322 None:intergenic 35.0%
TTCGAGATTACCAGATGTAA+AGG - chr4_1:33439304-33439323 None:intergenic 35.0%
TTTACATCTGGTAATCTCGA+AGG + chr4_1:33439303-33439322 Msa0544600:CDS 35.0%
TCAGTAGGACAATTATCGAA+TGG - chr4_1:33439546-33439565 None:intergenic 35.0%
!! ATTCTGTTTTTCTTACCCAC+TGG - chr4_1:33439683-33439702 None:intergenic 35.0%
TATTATTGGAAAGGAGGCTA+AGG - chr4_1:33439761-33439780 None:intergenic 35.0%
CTTGAGTATTATTGGAAAGG+AGG - chr4_1:33439767-33439786 None:intergenic 35.0%
AGGGCAATCTTGAGTATTAT+TGG - chr4_1:33439775-33439794 None:intergenic 35.0%
AATGAGTGGAAGATTAGAGA+GGG - chr4_1:33439794-33439813 None:intergenic 35.0%
TAATGAGTGGAAGATTAGAG+AGG - chr4_1:33439795-33439814 None:intergenic 35.0%
TAGTCAAAGTGGAAGATGAT+AGG - chr4_1:33439825-33439844 None:intergenic 35.0%
AATACAGCTACTTGTATGAC+TGG - chr4_1:33439944-33439963 None:intergenic 35.0%
GAATCTGACCATCAATTAAG+TGG - chr4_1:33440253-33440272 None:intergenic 35.0%
! AGCATCGAGTTATTAAGGTT+TGG - chr4_1:33440286-33440305 None:intergenic 35.0%
! TTAGCTTTCCCTAATTCCTT+AGG + chr4_1:33440324-33440343 Msa0544600:intron 35.0%
TGAGTTTGCCTAAGGAATTA+GGG - chr4_1:33440335-33440354 None:intergenic 35.0%
TTGAGTTTGCCTAAGGAATT+AGG - chr4_1:33440336-33440355 None:intergenic 35.0%
TGAGTATGTTCAGATAACCT+CGG + chr4_1:33440465-33440484 Msa0544600:intron 35.0%
TCAAATCTTTAAGCATGCAG+TGG + chr4_1:33440905-33440924 Msa0544600:three_prime_UTR 35.0%
TGTAGTAATGCATTGCCAAA+AGG + chr4_1:33441007-33441026 Msa0544600:three_prime_UTR 35.0%
TTACTGAAAATTCATGGCTG+AGG + chr4_1:33441044-33441063 Msa0544600:three_prime_UTR 35.0%
TACTGAAAATTCATGGCTGA+GGG + chr4_1:33441045-33441064 Msa0544600:three_prime_UTR 35.0%
!!! AGGGCATTTTGTTTTTGGAA+CGG + chr4_1:33441064-33441083 Msa0544600:three_prime_UTR 35.0%
AGTTTGAGTATGGCAGACAT+GGG - chr4_1:33429086-33429105 None:intergenic 40.0%
GGCTTGAAGTTCTTCCATAA+CGG - chr4_1:33429134-33429153 None:intergenic 40.0%
TTTCTTGCGGAGTTTACGTT+TGG - chr4_1:33429155-33429174 None:intergenic 40.0%
CAGTCTCACAAAACTTATGC+TGG - chr4_1:33429381-33429400 None:intergenic 40.0%
!! GCATAAGTTTTGTGAGACTG+TGG + chr4_1:33429381-33429400 Msa0544600:intron 40.0%
ATAGAAACAGGGCCTAAGTA+AGG + chr4_1:33429827-33429846 Msa0544600:intron 40.0%
TTACAAGAAATGCGTGGTTC+AGG + chr4_1:33429876-33429895 Msa0544600:intron 40.0%
GCAAGTCTTAAGAACTTGAC+TGG + chr4_1:33430011-33430030 Msa0544600:intron 40.0%
TGACTGGACAATTCACATAC+AGG + chr4_1:33430027-33430046 Msa0544600:intron 40.0%
! TAAGGCACTCACTATCACAT+AGG + chr4_1:33430472-33430491 Msa0544600:intron 40.0%
CAGCATTGTGACTGTAATTG+GGG + chr4_1:33431024-33431043 Msa0544600:intron 40.0%
GGCATGTTAAATAGGTTGCT+AGG + chr4_1:33431529-33431548 Msa0544600:intron 40.0%
TGGTCAAAATTGGATATGCC+GGG - chr4_1:33431690-33431709 None:intergenic 40.0%
! AGTACTGGATGATATGATGC+AGG + chr4_1:33431820-33431839 Msa0544600:intron 40.0%
GGTAGTACCAATATGATCTC+TGG + chr4_1:33431919-33431938 Msa0544600:intron 40.0%
CAGAACAGGCATTTCATGTA+AGG - chr4_1:33431972-33431991 None:intergenic 40.0%
AAAGGATTGCGTTGCGTTTA+TGG + chr4_1:33432085-33432104 Msa0544600:CDS 40.0%
AATACATCTACCTGCTCACT+TGG - chr4_1:33432118-33432137 None:intergenic 40.0%
!! AAAGACCCATTTGATGATGG+TGG - chr4_1:33432519-33432538 None:intergenic 40.0%
TTTGGGCAACTTTGTTCTTC+AGG - chr4_1:33432633-33432652 None:intergenic 40.0%
! GATTGTGGATACCCCTTTTT+GGG + chr4_1:33432755-33432774 Msa0544600:intron 40.0%
TAATGCAAGGCTATCTAGGA+AGG - chr4_1:33433245-33433264 None:intergenic 40.0%
GAACAACTGGTCATAAGCAT+TGG - chr4_1:33433332-33433351 None:intergenic 40.0%
TGAGGAGCTTATTCGTAGAA+AGG + chr4_1:33433403-33433422 Msa0544600:CDS 40.0%
AGCTGCTGAGAAAGAATTTC+AGG + chr4_1:33433436-33433455 Msa0544600:CDS 40.0%
CAGGACTTCATCAAACTGTT+AGG + chr4_1:33433455-33433474 Msa0544600:CDS 40.0%
ATAAACCTTCCAGATCTTCG+TGG + chr4_1:33433504-33433523 Msa0544600:CDS 40.0%
GGAAGGATGAGGAGAAAATT+TGG + chr4_1:33433525-33433544 Msa0544600:CDS 40.0%
GATGAACAAAGGAAAACAGC+CGG + chr4_1:33433596-33433615 Msa0544600:CDS 40.0%
ATGAACAAAGGAAAACAGCC+GGG + chr4_1:33433597-33433616 Msa0544600:CDS 40.0%
ATTTGTGGATTCTCCCCTAA+TGG - chr4_1:33433740-33433759 None:intergenic 40.0%
ACTTGTACCGTGTTATGCTT+AGG + chr4_1:33433789-33433808 Msa0544600:intron 40.0%
GTCAAATGCCTAGAGTATGA+GGG + chr4_1:33433965-33433984 Msa0544600:intron 40.0%
CTAGATGAGATCAACTACAG+GGG - chr4_1:33434009-33434028 None:intergenic 40.0%
AACAGCCTACTATCTAGAGA+TGG - chr4_1:33434056-33434075 None:intergenic 40.0%
GATACTAAAGGAAATGGGTC+TGG + chr4_1:33434139-33434158 Msa0544600:CDS 40.0%
ATCTCTTCCAAGTGATCAGT+GGG - chr4_1:33434253-33434272 None:intergenic 40.0%
! TTTCAAGGATGAAAGTGCAC+AGG - chr4_1:33434498-33434517 None:intergenic 40.0%
TGATTAACATCACAGCCTAG+GGG - chr4_1:33434865-33434884 None:intergenic 40.0%
GTGATTAACATCACAGCCTA+GGG - chr4_1:33434866-33434885 None:intergenic 40.0%
CTAGGCTGTGATGTTAATCA+CGG + chr4_1:33434865-33434884 Msa0544600:intron 40.0%
ACAATCAAACTTCCTAAGGG+AGG - chr4_1:33435032-33435051 None:intergenic 40.0%
TGTTCGAGAAGACCTATTGA+TGG + chr4_1:33435051-33435070 Msa0544600:intron 40.0%
AAGTTGGAAGAGGATATTGC+AGG + chr4_1:33435274-33435293 Msa0544600:intron 40.0%
! ACATGTGGGTTGTTGAGATA+AGG + chr4_1:33435439-33435458 Msa0544600:intron 40.0%
!! GTTGGAATTTTAGTGGGAGA+GGG - chr4_1:33435481-33435500 None:intergenic 40.0%
!! TGTTGGAATTTTAGTGGGAG+AGG - chr4_1:33435482-33435501 None:intergenic 40.0%
GAAGAACCTTACTAACCTGA+AGG + chr4_1:33435756-33435775 Msa0544600:CDS 40.0%
! CATAGACCTTCAGGTTAGTA+AGG - chr4_1:33435765-33435784 None:intergenic 40.0%
! TGATGTTGATGAAGCTGATG+AGG + chr4_1:33435789-33435808 Msa0544600:CDS 40.0%
GCAACTAGATATGTTCAACC+TGG + chr4_1:33435981-33436000 Msa0544600:CDS 40.0%
!! TGTTCAACCTGGAAGTATTG+TGG + chr4_1:33435992-33436011 Msa0544600:CDS 40.0%
!! AACCTGGAAGTATTGTGGAT+AGG + chr4_1:33435997-33436016 Msa0544600:CDS 40.0%
TACCTATCCACAATACTTCC+AGG - chr4_1:33436002-33436021 None:intergenic 40.0%
! GTGTGCCATTAAGAACGTTA+AGG - chr4_1:33436077-33436096 None:intergenic 40.0%
TAACGTTCTTAATGGCACAC+AGG + chr4_1:33436077-33436096 Msa0544600:intron 40.0%
AACGTTCTTAATGGCACACA+GGG + chr4_1:33436078-33436097 Msa0544600:intron 40.0%
GTTTCCAGAAAATCTTGCCA+TGG + chr4_1:33436153-33436172 Msa0544600:CDS 40.0%
! GAGCTATGAGTTTGAGACAA+GGG + chr4_1:33436176-33436195 Msa0544600:CDS 40.0%
! AGCTATGAGTTTGAGACAAG+GGG + chr4_1:33436177-33436196 Msa0544600:CDS 40.0%
AAGTCCCACATTGGATAGAT+AGG + chr4_1:33436475-33436494 Msa0544600:intron 40.0%
!! CTTTATGAGCTGGTTCTGTA+AGG + chr4_1:33436536-33436555 Msa0544600:intron 40.0%
GTTAGTCCCCAATTTCAACA+AGG + chr4_1:33436563-33436582 Msa0544600:intron 40.0%
GAAAAACCCAAGTCTCACAT+TGG + chr4_1:33436653-33436672 Msa0544600:intron 40.0%
CCTTACAAAACCGGATCATA+AGG - chr4_1:33436759-33436778 None:intergenic 40.0%
!! CCTTATGATCCGGTTTTGTA+AGG + chr4_1:33436756-33436775 Msa0544600:intron 40.0%
CAATTTGAACCTTGAAGAGG+AGG + chr4_1:33437083-33437102 Msa0544600:CDS 40.0%
TAAGTTCAACCTCCTCTTCA+AGG - chr4_1:33437095-33437114 None:intergenic 40.0%
AAAAGAAGAATCCTACCTGC+TGG - chr4_1:33437161-33437180 None:intergenic 40.0%
! TGTAATTTGTCTGGGATTCG+AGG + chr4_1:33437439-33437458 Msa0544600:intron 40.0%
AAACTGGCAGCATGCTTTAA+TGG + chr4_1:33437580-33437599 Msa0544600:intron 40.0%
AAGTATATTGTCTGAGAGGC+CGG + chr4_1:33437677-33437696 Msa0544600:intron 40.0%
CAATATTTGACTCCACGCAT+TGG - chr4_1:33437730-33437749 None:intergenic 40.0%
TCATTAAGGATCAACAAGCG+TGG - chr4_1:33437831-33437850 None:intergenic 40.0%
! GACATTCTGACTTGTGGAAT+TGG + chr4_1:33437849-33437868 Msa0544600:intron 40.0%
TGCATTCCCTTCCTTTGTTA+AGG + chr4_1:33437941-33437960 Msa0544600:intron 40.0%
GCATTCCCTTCCTTTGTTAA+GGG + chr4_1:33437942-33437961 Msa0544600:intron 40.0%
! CATCAAAGTGTCTAATCCAG+AGG + chr4_1:33437995-33438014 Msa0544600:CDS 40.0%
AACATTCCTTTACCCTACAG+GGG + chr4_1:33438134-33438153 Msa0544600:CDS 40.0%
! GAATTTTCCCATCTTCCAGA+AGG + chr4_1:33438185-33438204 Msa0544600:CDS 40.0%
TGCACGCATTATCTTGACTA+GGG - chr4_1:33438228-33438247 None:intergenic 40.0%
! GTGCAGCTGAAATTGATTTC+AGG + chr4_1:33438243-33438262 Msa0544600:CDS 40.0%
AGGTCCAAATATCTACGGAT+GGG - chr4_1:33438323-33438342 None:intergenic 40.0%
AAGGTCCAAATATCTACGGA+TGG - chr4_1:33438324-33438343 None:intergenic 40.0%
CAGTTATGTTCGTGTAGAAG+CGG + chr4_1:33439021-33439040 Msa0544600:intron 40.0%
TTCGTGTAGAAGCGGTATTT+GGG + chr4_1:33439029-33439048 Msa0544600:intron 40.0%
AGATTACCAGATGTAAAGGG+TGG - chr4_1:33439300-33439319 None:intergenic 40.0%
ATGAGAAAGTTAGAGCAGTG+AGG + chr4_1:33439343-33439362 Msa0544600:CDS 40.0%
AGGACAATTATCGAATGGCA+CGG - chr4_1:33439541-33439560 None:intergenic 40.0%
TATGCTGCTACATTCTCAGT+AGG - chr4_1:33439561-33439580 None:intergenic 40.0%
GACAGGATAGTGATATACAC+TGG + chr4_1:33439592-33439611 Msa0544600:intron 40.0%
!! TCTCTGGAATACATGGATGA+GGG - chr4_1:33439723-33439742 None:intergenic 40.0%
!! ATCTCTGGAATACATGGATG+AGG - chr4_1:33439724-33439743 None:intergenic 40.0%
!! TTCTGGATCTCTGGAATACA+TGG - chr4_1:33439730-33439749 None:intergenic 40.0%
! GATAGAATGTTCTGGATCTC+TGG - chr4_1:33439739-33439758 None:intergenic 40.0%
AGGCTAAGGATAGAATGTTC+TGG - chr4_1:33439747-33439766 None:intergenic 40.0%
! TAGTTGTGTCGATGGCATAT+TGG + chr4_1:33439910-33439929 Msa0544600:intron 40.0%
AATAAGACTGGGAGAACTGA+TGG + chr4_1:33440075-33440094 Msa0544600:intron 40.0%
!! TAAGTGGAAATCACTGGCTT+AGG - chr4_1:33440237-33440256 None:intergenic 40.0%
GAGTATGTTCAGATAACCTC+GGG + chr4_1:33440466-33440485 Msa0544600:intron 40.0%
CTGCAAACGAGAATCATCTT+AGG - chr4_1:33440547-33440566 None:intergenic 40.0%
CTAAGATGATTCTCGTTTGC+AGG + chr4_1:33440545-33440564 Msa0544600:intron 40.0%
TTGGATTTCAAGCTACTGCT+TGG + chr4_1:33440568-33440587 Msa0544600:CDS 40.0%
TGGATTTCAAGCTACTGCTT+GGG + chr4_1:33440569-33440588 Msa0544600:CDS 40.0%
TCTCAGTTGGATCACAGATA+GGG + chr4_1:33440592-33440611 Msa0544600:CDS 40.0%
TATGTGAAGGAGGTTGTAAG+AGG + chr4_1:33440666-33440685 Msa0544600:CDS 40.0%
TGCTCTCAAATGAAAGAGTG+TGG - chr4_1:33440780-33440799 None:intergenic 40.0%
!! AATAATGGGCAAACTATCGG+CGG - chr4_1:33440955-33440974 None:intergenic 40.0%
!! TGTCTCGATCATAGTGGATA+TGG + chr4_1:33441257-33441276 Msa0544600:three_prime_UTR 40.0%
CGATGATTCGATATCAACCA+AGG + chr4_1:33441308-33441327 Msa0544600:three_prime_UTR 40.0%
! GTAACAACTTTAGGAATCGC+AGG - chr4_1:33441358-33441377 None:intergenic 40.0%
AGCTATGAGTGAGTGAAGGT+AGG - chr4_1:33428904-33428923 None:intergenic 45.0%
TTGGAGCTATGAGTGAGTGA+AGG - chr4_1:33428908-33428927 None:intergenic 45.0%
GAGTTTGAGTATGGCAGACA+TGG - chr4_1:33429087-33429106 None:intergenic 45.0%
TGATGGAGCGAGTTTGAGTA+TGG - chr4_1:33429096-33429115 None:intergenic 45.0%
! GGTTTCGAAGAGGCTTTTGA+TGG - chr4_1:33429113-33429132 None:intergenic 45.0%
AAGCCTCTTCGAAACCGTTA+TGG + chr4_1:33429117-33429136 Msa0544600:CDS 45.0%
CTTCCATAACGGTTTCGAAG+AGG - chr4_1:33429123-33429142 None:intergenic 45.0%
ACTCACTATCACATAGGCAC+TGG + chr4_1:33430478-33430497 Msa0544600:intron 45.0%
!!! GTTGTTTTGGTGTTGGACAC+TGG + chr4_1:33430568-33430587 Msa0544600:intron 45.0%
GGTCAAATATTTAGGGGCAG+AGG - chr4_1:33430674-33430693 None:intergenic 45.0%
AGTCAAAACAGGTTATCCGG+AGG + chr4_1:33431128-33431147 Msa0544600:intron 45.0%
ACAGCAAAACCAAAAGGAGG+AGG - chr4_1:33431208-33431227 None:intergenic 45.0%
! GTGAAGCGTTCCTTGCAAAA+AGG + chr4_1:33431388-33431407 Msa0544600:CDS 45.0%
ATCCAGTTCTTCTTGCCATC+AGG - chr4_1:33431472-33431491 None:intergenic 45.0%
TGATGGCAAGAAGAACTGGA+TGG + chr4_1:33431471-33431490 Msa0544600:CDS 45.0%
GAACTGGATGGTTTCAGATC+AGG + chr4_1:33431483-33431502 Msa0544600:CDS 45.0%
!! TGTCACTTGTTGTGGCTTGA+TGG - chr4_1:33431658-33431677 None:intergenic 45.0%
TCAGAAAGCTCAGGACAACA+TGG + chr4_1:33431731-33431750 Msa0544600:CDS 45.0%
AGCCATCTCTTCAACTGTCA+CGG - chr4_1:33431897-33431916 None:intergenic 45.0%
TGAGCAGAATAACTCTCGAG+AGG - chr4_1:33432019-33432038 None:intergenic 45.0%
GGTCACCACCATCATCAAAT+GGG + chr4_1:33432511-33432530 Msa0544600:intron 45.0%
GGACATTTCTCCAGTACTAC+GGG - chr4_1:33432685-33432704 None:intergenic 45.0%
GGGACATTTCTCCAGTACTA+CGG - chr4_1:33432686-33432705 None:intergenic 45.0%
! GGATTGTGGATACCCCTTTT+TGG + chr4_1:33432754-33432773 Msa0544600:intron 45.0%
ACAGTAGAAAAGCGGACAGA+CGG + chr4_1:33433079-33433098 Msa0544600:intron 45.0%
CTGGAAGGTTTATCGTGTGA+AGG - chr4_1:33433497-33433516 None:intergenic 45.0%
TCACTGGGTCTTACTCCATT+AGG + chr4_1:33433722-33433741 Msa0544600:intron 45.0%
CACTGGGTCTTACTCCATTA+GGG + chr4_1:33433723-33433742 Msa0544600:intron 45.0%
ACTGGGTCTTACTCCATTAG+GGG + chr4_1:33433724-33433743 Msa0544600:intron 45.0%
GGTCAAATGCCTAGAGTATG+AGG + chr4_1:33433964-33433983 Msa0544600:intron 45.0%
ACGTAAGACCCTCATACTCT+AGG - chr4_1:33433976-33433995 None:intergenic 45.0%
! GTATCTGCAAGAAGCATGGA+GGG - chr4_1:33434124-33434143 None:intergenic 45.0%
! AGTATCTGCAAGAAGCATGG+AGG - chr4_1:33434125-33434144 None:intergenic 45.0%
GAGAATTCCCACTGATCACT+TGG + chr4_1:33434243-33434262 Msa0544600:CDS 45.0%
GATCTCTTCCAAGTGATCAG+TGG - chr4_1:33434254-33434273 None:intergenic 45.0%
AGATTCATCTGATCCAGACG+AGG + chr4_1:33434300-33434319 Msa0544600:CDS 45.0%
ATGTATTCAAGCAGGGCTGA+TGG + chr4_1:33434759-33434778 Msa0544600:intron 45.0%
CGTGATTAACATCACAGCCT+AGG - chr4_1:33434867-33434886 None:intergenic 45.0%
! AGAGGGGCACAAGACAAAAT+AGG + chr4_1:33434963-33434982 Msa0544600:intron 45.0%
GTTGGCGTAGTACCCTATTA+TGG + chr4_1:33434991-33435010 Msa0544600:intron 45.0%
AGATGGTAGAATCCTCCCTT+AGG + chr4_1:33435017-33435036 Msa0544600:intron 45.0%
GCTTGGTAAAAACATGCCCT+TGG - chr4_1:33435340-33435359 None:intergenic 45.0%
TATCCTACTGAGCGATAAGG+TGG + chr4_1:33435403-33435422 Msa0544600:intron 45.0%
CCAGCTTTCTACGCGAAATT+TGG - chr4_1:33435570-33435589 None:intergenic 45.0%
CCAAATTTCGCGTAGAAAGC+TGG + chr4_1:33435567-33435586 Msa0544600:intron 45.0%
TGAATCCTCCGATTGTTACC+TGG + chr4_1:33435670-33435689 Msa0544600:intron 45.0%
TGTTTCCAGGTAACAATCGG+AGG - chr4_1:33435678-33435697 None:intergenic 45.0%
CATCAATGGCATAGACCTTC+AGG - chr4_1:33435774-33435793 None:intergenic 45.0%
TCTCAAACTCATAGCTCCCA+TGG - chr4_1:33436173-33436192 None:intergenic 45.0%
! GGAGCTATGAGTTTGAGACA+AGG + chr4_1:33436175-33436194 Msa0544600:CDS 45.0%
! TATGAGTTTGAGACAAGGGG+AGG + chr4_1:33436180-33436199 Msa0544600:CDS 45.0%
TGCAACATAGCACAGTTGAG+TGG - chr4_1:33436326-33436345 None:intergenic 45.0%
GGAAAACTCAAGTCCCACAT+TGG + chr4_1:33436466-33436485 Msa0544600:intron 45.0%
GCACTCTTCACTTTATGAGC+TGG + chr4_1:33436526-33436545 Msa0544600:intron 45.0%
GGTATCAGAGCCTATCGTTT+CGG + chr4_1:33436584-33436603 Msa0544600:intron 45.0%
GTATCAGAGCCTATCGTTTC+GGG + chr4_1:33436585-33436604 Msa0544600:intron 45.0%
CAAAACCGGATCATAAGGTG+AGG - chr4_1:33436754-33436773 None:intergenic 45.0%
! TGTCTGAGGCTGCAAATCTT+CGG + chr4_1:33437121-33437140 Msa0544600:CDS 45.0%
AGAAACTTGTACCCAATGCG+TGG + chr4_1:33437715-33437734 Msa0544600:intron 45.0%
CTGCACCCTTAACAAAGGAA+GGG - chr4_1:33437950-33437969 None:intergenic 45.0%
ACTGCACCCTTAACAAAGGA+AGG - chr4_1:33437951-33437970 None:intergenic 45.0%
CAGAGACTAATCGCATTGCA+GGG - chr4_1:33438064-33438083 None:intergenic 45.0%
TCAGAGACTAATCGCATTGC+AGG - chr4_1:33438065-33438084 None:intergenic 45.0%
! TCTGAGATGATGATCCTCTG+TGG + chr4_1:33438080-33438099 Msa0544600:CDS 45.0%
GGCGAAGCTATAGCTACATT+TGG + chr4_1:33438101-33438120 Msa0544600:CDS 45.0%
CTGCACGCATTATCTTGACT+AGG - chr4_1:33438229-33438248 None:intergenic 45.0%
CAAATATCTACGGATGGGAG+AGG - chr4_1:33438318-33438337 None:intergenic 45.0%
CTCTCCCATCCGTAGATATT+TGG + chr4_1:33438316-33438335 Msa0544600:CDS 45.0%
GGACCTTCTTGCTCATTATC+AGG + chr4_1:33438337-33438356 Msa0544600:CDS 45.0%
TTGCGAAATCAGCAAGAGTC+AGG + chr4_1:33438440-33438459 Msa0544600:intron 45.0%
AGCAAGAGTCAGGATACTGA+AGG + chr4_1:33438450-33438469 Msa0544600:intron 45.0%
GTTCGTGTAGAAGCGGTATT+TGG + chr4_1:33439028-33439047 Msa0544600:intron 45.0%
!! CTGTCTGTTTTGGATGTGTC+TGG + chr4_1:33439225-33439244 Msa0544600:intron 45.0%
TTACCAGATGTAAAGGGTGG+AGG - chr4_1:33439297-33439316 None:intergenic 45.0%
! GCACGGTATCTTCTCTCTTT+TGG - chr4_1:33439423-33439442 None:intergenic 45.0%
GTCTGGATTGAGTTTGCCTA+AGG - chr4_1:33440343-33440362 None:intergenic 45.0%
GTGATTCCTGCAAATACTGC+AGG - chr4_1:33440365-33440384 None:intergenic 45.0%
ACACGTATGAGTAATACCCG+AGG - chr4_1:33440485-33440504 None:intergenic 45.0%
GATGATTCTCGTTTGCAGGT+TGG + chr4_1:33440549-33440568 Msa0544600:intron 45.0%
GTCTCAGTTGGATCACAGAT+AGG + chr4_1:33440591-33440610 Msa0544600:CDS 45.0%
CTCAGTTGGATCACAGATAG+GGG + chr4_1:33440593-33440612 Msa0544600:CDS 45.0%
ACAGATAGGGGATGAAGTAG+TGG + chr4_1:33440605-33440624 Msa0544600:CDS 45.0%
AGGGGATGAAGTAGTGGTTA+AGG + chr4_1:33440611-33440630 Msa0544600:CDS 45.0%
AAGCTGACTGGGAGTTAACA+AGG - chr4_1:33440806-33440825 None:intergenic 45.0%
TTGTTAACTCCCAGTCAGCT+TGG + chr4_1:33440805-33440824 Msa0544600:three_prime_UTR 45.0%
! GTACAACCTCGTCTTTTGCA+TGG + chr4_1:33440836-33440855 Msa0544600:three_prime_UTR 45.0%
TGCAGTGGCATAAAGTTAGC+AGG + chr4_1:33440920-33440939 Msa0544600:three_prime_UTR 45.0%
!!! GGCTGAGGGCATTTTGTTTT+TGG + chr4_1:33441059-33441078 Msa0544600:three_prime_UTR 45.0%
!! CTCGATCATAGTGGATATGG+AGG + chr4_1:33441260-33441279 Msa0544600:three_prime_UTR 45.0%
!! TTATTTATCATATAATAATA+AGG + chr4_1:33430376-33430395 Msa0544600:intron 5.0%
!! TATTTATCATATAATAATAA+GGG + chr4_1:33430377-33430396 Msa0544600:intron 5.0%
!!! TTTAAAACTATAAAAATTAT+AGG + chr4_1:33435126-33435145 Msa0544600:intron 5.0%
!! TTAAAACTATAAAAATTATA+GGG + chr4_1:33435127-33435146 Msa0544600:intron 5.0%
!! AAACTAAAATATAATATATT+TGG - chr4_1:33439106-33439125 None:intergenic 5.0%
!!! TATTATATAATATTTTTCAT+AGG + chr4_1:33439515-33439534 Msa0544600:intron 5.0%
GCTCGAACAGCCATTGAAGA+AGG - chr4_1:33428944-33428963 None:intergenic 50.0%
TTGAGTATGGCAGACATGGG+AGG - chr4_1:33429083-33429102 None:intergenic 50.0%
TGTGAGACTGTGGACCCATT+TGG + chr4_1:33429391-33429410 Msa0544600:intron 50.0%
! ACATGCTTTGTGGAAGCGTG+TGG + chr4_1:33429974-33429993 Msa0544600:intron 50.0%
GACCTGATGGCAAGAAGAAC+TGG + chr4_1:33431467-33431486 Msa0544600:CDS 50.0%
GTCCGTGACAGTTGAAGAGA+TGG + chr4_1:33431892-33431911 Msa0544600:CDS 50.0%
GACAGTTGAAGAGATGGCTG+AGG + chr4_1:33431898-33431917 Msa0544600:CDS 50.0%
TAACTGCTACAGCTGTCTCG+TGG - chr4_1:33432483-33432502 None:intergenic 50.0%
CGGTCACCACCATCATCAAA+TGG + chr4_1:33432510-33432529 Msa0544600:intron 50.0%
TGGAGTTTCTCCCGTAGTAC+TGG + chr4_1:33432672-33432691 Msa0544600:intron 50.0%
!!! GTGGATACCCCTTTTTGGGT+TGG + chr4_1:33432759-33432778 Msa0544600:intron 50.0%
CAGTAGAAAAGCGGACAGAC+GGG + chr4_1:33433080-33433099 Msa0544600:intron 50.0%
ACCTTCCAGATCTTCGTGGA+AGG + chr4_1:33433508-33433527 Msa0544600:CDS 50.0%
TCCTTCCACGAAGATCTGGA+AGG - chr4_1:33433512-33433531 None:intergenic 50.0%
CTCATCCTTCCACGAAGATC+TGG - chr4_1:33433516-33433535 None:intergenic 50.0%
CAGATCTTCGTGGAAGGATG+AGG + chr4_1:33433514-33433533 Msa0544600:CDS 50.0%
TGGTAGGTGTGGTCAACCAA+GGG + chr4_1:33435321-33435340 Msa0544600:intron 50.0%
AGACCACCTTATCGCTCAGT+AGG - chr4_1:33435409-33435428 None:intergenic 50.0%
TACTGAGCGATAAGGTGGTC+TGG + chr4_1:33435408-33435427 Msa0544600:intron 50.0%
ACTGAGCGATAAGGTGGTCT+GGG + chr4_1:33435409-33435428 Msa0544600:intron 50.0%
GTTCTTAATGGCACACAGGG+AGG + chr4_1:33436081-33436100 Msa0544600:intron 50.0%
! GCTCCCATGGCAAGATTTTC+TGG - chr4_1:33436160-33436179 None:intergenic 50.0%
TCAGTTGTGCTGCATGACGA+TGG + chr4_1:33436223-33436242 Msa0544600:CDS 50.0%
! CCAACACTATTGGGCTTGGT+GGG - chr4_1:33436614-33436633 None:intergenic 50.0%
CCACCAAGCCCAATAGTGTT+GGG + chr4_1:33436612-33436631 Msa0544600:intron 50.0%
GCACTCCTCACCTTATGATC+CGG + chr4_1:33436746-33436765 Msa0544600:intron 50.0%
AGAAGAATCCTACCTGCTGG+CGG - chr4_1:33437158-33437177 None:intergenic 50.0%
! AGGAGCTTTGGTCTATCCCA+TGG + chr4_1:33437459-33437478 Msa0544600:intron 50.0%
CTCGACTGCACCCTTAACAA+AGG - chr4_1:33437955-33437974 None:intergenic 50.0%
!! ATTGATGGCTCTGGATCCTC+TGG - chr4_1:33438014-33438033 None:intergenic 50.0%
TAGCTATAGCTTCGCCACAG+AGG - chr4_1:33438097-33438116 None:intergenic 50.0%
GATTGAGGTTGTCCCCTGTA+GGG - chr4_1:33438149-33438168 None:intergenic 50.0%
TGATTGAGGTTGTCCCCTGT+AGG - chr4_1:33438150-33438169 None:intergenic 50.0%
! AACAGGCCCTTCTGGAAGAT+GGG - chr4_1:33438195-33438214 None:intergenic 50.0%
! TAACAGGCCCTTCTGGAAGA+TGG - chr4_1:33438196-33438215 None:intergenic 50.0%
ATCTTCCAGAAGGGCCTGTT+AGG + chr4_1:33438195-33438214 Msa0544600:CDS 50.0%
ACTAGGGCAAAGCTCCTAAC+AGG - chr4_1:33438212-33438231 None:intergenic 50.0%
CAGGAATTCCCAAAACCCCA+TGG - chr4_1:33438280-33438299 None:intergenic 50.0%
!!! CATGGGGTTTTGGGAATTCC+TGG + chr4_1:33438278-33438297 Msa0544600:CDS 50.0%
TAGTTCCCTTCACAAGGGAC+AGG + chr4_1:33438500-33438519 Msa0544600:intron 50.0%
AATCTCGAAGGTCTAGCAGC+AGG + chr4_1:33439315-33439334 Msa0544600:CDS 50.0%
! CCAGTAACGGAGACTACTGT+TGG - chr4_1:33439376-33439395 None:intergenic 50.0%
CCAACAGTAGTCTCCGTTAC+TGG + chr4_1:33439373-33439392 Msa0544600:CDS 50.0%
TCGCATTGCAGCTCTGTTGT+TGG + chr4_1:33439467-33439486 Msa0544600:CDS 50.0%
! TGCAGCTCTGTTGTTGGTTG+AGG + chr4_1:33439473-33439492 Msa0544600:CDS 50.0%
TCCAGACCTGCAGTATTTGC+AGG + chr4_1:33440356-33440375 Msa0544600:intron 50.0%
TCCTGCAAATACTGCAGGTC+TGG - chr4_1:33440360-33440379 None:intergenic 50.0%
GCACTTCCATGCAAAAGACG+AGG - chr4_1:33440845-33440864 None:intergenic 50.0%
AGAGAGAAGGGGAGGAAGAG+CGG - chr4_1:33428988-33429007 None:intergenic 55.0%
AGTATGGCAGACATGGGAGG+AGG - chr4_1:33429080-33429099 None:intergenic 55.0%
GCAGTAGCTCAGAGACCTGA+TGG + chr4_1:33431454-33431473 Msa0544600:CDS 55.0%
TCTACCTGCTCACTTGGTCG+AGG - chr4_1:33432112-33432131 None:intergenic 55.0%
CTGGTAGGTGTGGTCAACCA+AGG + chr4_1:33435320-33435339 Msa0544600:intron 55.0%
GTCTGGGAGGAGGAACATGT+GGG + chr4_1:33435425-33435444 Msa0544600:intron 55.0%
CACAGGGAGGCTATGAGAAG+AGG + chr4_1:33436094-33436113 Msa0544600:intron 55.0%
TTGTGCTGCATGACGATGGC+AGG + chr4_1:33436227-33436246 Msa0544600:CDS 55.0%
!! ACACTATTGGGCTTGGTGGG+TGG - chr4_1:33436611-33436630 None:intergenic 55.0%
CCCACCAAGCCCAATAGTGT+TGG + chr4_1:33436611-33436630 Msa0544600:intron 55.0%
CCCAACACTATTGGGCTTGG+TGG - chr4_1:33436615-33436634 None:intergenic 55.0%
ACGCCCAACACTATTGGGCT+TGG - chr4_1:33436618-33436637 None:intergenic 55.0%
CCCTCACGCCCAACACTATT+GGG - chr4_1:33436623-33436642 None:intergenic 55.0%
! CCCAATAGTGTTGGGCGTGA+GGG + chr4_1:33436620-33436639 Msa0544600:intron 55.0%
! CCAATAGTGTTGGGCGTGAG+GGG + chr4_1:33436621-33436640 Msa0544600:intron 55.0%
! CAATAGTGTTGGGCGTGAGG+GGG + chr4_1:33436622-33436641 Msa0544600:intron 55.0%
! GTCTGGGATTCGAGGAGCTT+TGG + chr4_1:33437447-33437466 Msa0544600:intron 55.0%
GGTTGTCCCCTGTAGGGTAA+AGG - chr4_1:33438143-33438162 None:intergenic 55.0%
AAGCTCCTAACAGGCCCTTC+TGG - chr4_1:33438203-33438222 None:intergenic 55.0%
TGCGTCCTGTCCCTTGTGAA+GGG - chr4_1:33438508-33438527 None:intergenic 55.0%
GACGCAGGATGGGACAGTTT+GGG + chr4_1:33438522-33438541 Msa0544600:intron 55.0%
GAGCCTCCACCCTTTACATC+TGG + chr4_1:33439291-33439310 Msa0544600:CDS 55.0%
GCTACTGCTTGGGTCTCAGT+TGG + chr4_1:33440579-33440598 Msa0544600:CDS 55.0%
CCGAACTAGCCAAGCTGACT+GGG - chr4_1:33440817-33440836 None:intergenic 55.0%
! CCCAGTCAGCTTGGCTAGTT+CGG + chr4_1:33440814-33440833 Msa0544600:three_prime_UTR 55.0%
ACCGAACTAGCCAAGCTGAC+TGG - chr4_1:33440818-33440837 None:intergenic 55.0%
GAAGTGCGATCACGCTTCAC+TGG + chr4_1:33440858-33440877 Msa0544600:three_prime_UTR 55.0%
AATGGGCAAACTATCGGCGG+CGG - chr4_1:33440952-33440971 None:intergenic 55.0%
TGGGGATAAGAAGCGGGGGA+CGG - chr4_1:33429014-33429033 None:intergenic 60.0%
GGTGTGGGGATAAGAAGCGG+GGG - chr4_1:33429018-33429037 None:intergenic 60.0%
CGGTGTGGGGATAAGAAGCG+GGG - chr4_1:33429019-33429038 None:intergenic 60.0%
GCGGTGTGGGGATAAGAAGC+GGG - chr4_1:33429020-33429039 None:intergenic 60.0%
GGCGGTGTGGGGATAAGAAG+CGG - chr4_1:33429021-33429040 None:intergenic 60.0%
AGGAGGATGGAAGCGGAGAG+CGG - chr4_1:33429053-33429072 None:intergenic 60.0%
AGGAGGGAGGAGGATGGAAG+CGG - chr4_1:33429060-33429079 None:intergenic 60.0%
TGGCAGACATGGGAGGAGGA+GGG - chr4_1:33429076-33429095 None:intergenic 60.0%
ATGGCAGACATGGGAGGAGG+AGG - chr4_1:33429077-33429096 None:intergenic 60.0%
GTATCACATGCGGCCCCGTT+TGG - chr4_1:33429615-33429634 None:intergenic 60.0%
TGGACCTCGACCAAGTGAGC+AGG + chr4_1:33432105-33432124 Msa0544600:CDS 60.0%
AAGCGGACAGACGGGCACAT+AGG + chr4_1:33433088-33433107 Msa0544600:intron 60.0%
GAGCGATAAGGTGGTCTGGG+AGG + chr4_1:33435412-33435431 Msa0544600:intron 60.0%
CGATAAGGTGGTCTGGGAGG+AGG + chr4_1:33435415-33435434 Msa0544600:intron 60.0%
GGTCTGGGAGGAGGAACATG+TGG + chr4_1:33435424-33435443 Msa0544600:intron 60.0%
! GCCCAATAGTGTTGGGCGTG+AGG + chr4_1:33436619-33436638 Msa0544600:intron 60.0%
CCCCTCACGCCCAACACTAT+TGG - chr4_1:33436624-33436643 None:intergenic 60.0%
GTTAAATTGGCGCCGCCAGC+AGG + chr4_1:33437143-33437162 Msa0544600:CDS 60.0%
TTCAGGAAGCCAGCACGCCA+TGG + chr4_1:33438260-33438279 Msa0544600:CDS 60.0%
TCAGGAAGCCAGCACGCCAT+GGG + chr4_1:33438261-33438280 Msa0544600:CDS 60.0%
! CCAGCACGCCATGGGGTTTT+GGG + chr4_1:33438269-33438288 Msa0544600:CDS 60.0%
CTGCGTCCTGTCCCTTGTGA+AGG - chr4_1:33438509-33438528 None:intergenic 60.0%
CTTCACAAGGGACAGGACGC+AGG + chr4_1:33438507-33438526 Msa0544600:intron 60.0%
ACAAGGGACAGGACGCAGGA+TGG + chr4_1:33438511-33438530 Msa0544600:intron 60.0%
CAAGGGACAGGACGCAGGAT+GGG + chr4_1:33438512-33438531 Msa0544600:intron 60.0%
GGACGCAGGATGGGACAGTT+TGG + chr4_1:33438521-33438540 Msa0544600:intron 60.0%
GAGAAGGGGAGGAAGAGCGG+AGG - chr4_1:33428985-33429004 None:intergenic 65.0%
GACGGTGGAGAGAGAAGGGG+AGG - chr4_1:33428996-33429015 None:intergenic 65.0%
GGGGACGGTGGAGAGAGAAG+GGG - chr4_1:33428999-33429018 None:intergenic 65.0%
GGGGGACGGTGGAGAGAGAA+GGG - chr4_1:33429000-33429019 None:intergenic 65.0%
GGATAAGAAGCGGGGGACGG+TGG - chr4_1:33429011-33429030 None:intergenic 65.0%
ATGGAAGCGGAGAGCGGAGG+GGG - chr4_1:33429047-33429066 None:intergenic 65.0%
GATGGAAGCGGAGAGCGGAG+GGG - chr4_1:33429048-33429067 None:intergenic 65.0%
GGATGGAAGCGGAGAGCGGA+GGG - chr4_1:33429049-33429068 None:intergenic 65.0%
AGGATGGAAGCGGAGAGCGG+AGG - chr4_1:33429050-33429069 None:intergenic 65.0%
ACATGGGAGGAGGAGGGAGG+AGG - chr4_1:33429070-33429089 None:intergenic 65.0%
CAGACATGGGAGGAGGAGGG+AGG - chr4_1:33429073-33429092 None:intergenic 65.0%
GGTGGGTGGCCCGAAACGAT+AGG - chr4_1:33436597-33436616 None:intergenic 65.0%
AATTGGCGCCGCCAGCAGGT+AGG + chr4_1:33437147-33437166 Msa0544600:intron 65.0%
CAGGAAGCCAGCACGCCATG+GGG + chr4_1:33438262-33438281 Msa0544600:CDS 65.0%
! GCCAGCACGCCATGGGGTTT+TGG + chr4_1:33438268-33438287 Msa0544600:CDS 65.0%
CCCAAAACCCCATGGCGTGC+TGG - chr4_1:33438272-33438291 None:intergenic 65.0%
GGAAGAGCGGAGGAGCGGGT+AGG - chr4_1:33428975-33428994 None:intergenic 70.0%
GGGAGGAAGAGCGGAGGAGC+GGG - chr4_1:33428979-33428998 None:intergenic 70.0%
GGGGAGGAAGAGCGGAGGAG+CGG - chr4_1:33428980-33428999 None:intergenic 70.0%
CGGGGGACGGTGGAGAGAGA+AGG - chr4_1:33429001-33429020 None:intergenic 70.0%
TGGAAGCGGAGAGCGGAGGG+GGG - chr4_1:33429046-33429065 None:intergenic 70.0%
GGGAGGAGGAGGGAGGAGGA+TGG - chr4_1:33429066-33429085 None:intergenic 70.0%
AGCGGAGAGCGGAGGGGGGA+GGG - chr4_1:33429042-33429061 None:intergenic 75.0%
AAGCGGAGAGCGGAGGGGGG+AGG - chr4_1:33429043-33429062 None:intergenic 75.0%
! GGAGGGGGGAGGGCGGTGTG+GGG - chr4_1:33429032-33429051 None:intergenic 80.0%
! CGGAGGGGGGAGGGCGGTGT+GGG - chr4_1:33429033-33429052 None:intergenic 80.0%
! GGAGAGCGGAGGGGGGAGGG+CGG - chr4_1:33429039-33429058 None:intergenic 80.0%
! GCGGAGGGGGGAGGGCGGTG+TGG - chr4_1:33429034-33429053 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 33428890 33441385 33428890 ID=Msa0544600;Name=Msa0544600
chr4_1 mRNA 33428890 33441385 33428890 ID=Msa0544600-mRNA-1;Parent=Msa0544600;Name=Msa0544600-mRNA-1;_AED=0.16;_eAED=0.16;_QI=60|0.92|0.85|1|0.92|0.85|14|693|834
chr4_1 exon 33428890 33429206 33428890 ID=Msa0544600-mRNA-1:exon:8524;Parent=Msa0544600-mRNA-1
chr4_1 exon 33431348 33431504 33431348 ID=Msa0544600-mRNA-1:exon:8525;Parent=Msa0544600-mRNA-1
chr4_1 exon 33431639 33431752 33431639 ID=Msa0544600-mRNA-1:exon:8526;Parent=Msa0544600-mRNA-1
chr4_1 exon 33431842 33431919 33431842 ID=Msa0544600-mRNA-1:exon:8527;Parent=Msa0544600-mRNA-1
chr4_1 exon 33431995 33432126 33431995 ID=Msa0544600-mRNA-1:exon:8528;Parent=Msa0544600-mRNA-1
chr4_1 exon 33433401 33433688 33433401 ID=Msa0544600-mRNA-1:exon:8529;Parent=Msa0544600-mRNA-1
chr4_1 exon 33434070 33434321 33434070 ID=Msa0544600-mRNA-1:exon:8530;Parent=Msa0544600-mRNA-1
chr4_1 exon 33435748 33435810 33435748 ID=Msa0544600-mRNA-1:exon:8531;Parent=Msa0544600-mRNA-1
chr4_1 exon 33435912 33436018 33435912 ID=Msa0544600-mRNA-1:exon:8532;Parent=Msa0544600-mRNA-1
chr4_1 exon 33436099 33436248 33436099 ID=Msa0544600-mRNA-1:exon:8533;Parent=Msa0544600-mRNA-1
chr4_1 exon 33437005 33437164 33437005 ID=Msa0544600-mRNA-1:exon:8534;Parent=Msa0544600-mRNA-1
chr4_1 exon 33437963 33438358 33437963 ID=Msa0544600-mRNA-1:exon:8535;Parent=Msa0544600-mRNA-1
chr4_1 exon 33439270 33439494 33439270 ID=Msa0544600-mRNA-1:exon:8536;Parent=Msa0544600-mRNA-1
chr4_1 exon 33440567 33441385 33440567 ID=Msa0544600-mRNA-1:exon:8537;Parent=Msa0544600-mRNA-1
chr4_1 five_prime_UTR 33428890 33428949 33428890 ID=Msa0544600-mRNA-1:five_prime_utr;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33428950 33429206 33428950 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33431348 33431504 33431348 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33431639 33431752 33431639 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33431842 33431919 33431842 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33431995 33432126 33431995 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33433401 33433688 33433401 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33434070 33434321 33434070 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33435748 33435810 33435748 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33435912 33436018 33435912 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33436099 33436248 33436099 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33437005 33437164 33437005 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33437963 33438358 33437963 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33439270 33439494 33439270 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 CDS 33440567 33440692 33440567 ID=Msa0544600-mRNA-1:cds;Parent=Msa0544600-mRNA-1
chr4_1 three_prime_UTR 33440693 33441385 33440693 ID=Msa0544600-mRNA-1:three_prime_utr;Parent=Msa0544600-mRNA-1
Gene Sequence

>Msa0544600

ATGGCTGTTCGAGCAGTTAACACCTACCCGCTCCTCCGCTCTTCCTCCCCTTCTCTCTCCACCGTCCCCCGCTTCTTATCCCCACACCGCCCTCCCCCCTCCGCTCTCCGCTTCCATCCTCCTCCCTCCTCCTCCCATGTCTGCCATACTCAAACTCGCTCCATCAAAAGCCTCTTCGAAACCGTTATGGAAGAACTTCAAGCCAAACGTAAACTCCGCAAGAAAATAGTTTCCGTTAATGCTTCTTCATCTTCAAACACGGAACTATTGAATGAAGAGCATGTTGAAGATAGACTTGTGAAGCGTTCCTTGCAAAAAGGTTTGCTTTTGGAATTCAAGAAAGATTCTGATAAAATATTGCTAGCAGTAGCTCAGAGACCTGATGGCAAGAAGAACTGGATGGTTTCAGATCAGAATGGTGTCACTAGTTCCATCAAGCCACAACAAGTGACATATATTGTTCCCGGCATATCCAATTTTGACCAAGCAGATATCACACATTTTGTTCAGAAAGCTCAGGACAACATGGACCCATCACTACTTGAATTTGCTTGGTTTGAGCTACATGAAAAGAATAAGTCCGTGACAGTTGAAGAGATGGCTGAGATAATTTTTGGTTGTGTTGAGCCTCTCGAGAGTTATTCTGCTCATCTCTTGCTATCAAAAGACGAAATATACTTTACTATACTCGAATCTAAAGGATTGCGTTGCGTTTATGGACCTCGACCAAGTGAGCAGGTTGAGGAGCTTATTCGTAGAAAGGTTGCAAAGGAAGCTGCTGAGAAAGAATTTCAGGACTTCATCAAACTGTTAGGCTCTGCAAAATCAATGCCTTCACACGATAAACCTTCCAGATCTTCGTGGAAGGATGAGGAGAAAATTTGGAGCAGAATTGAGTCACTTGAAGCATATGCTATTGATGCTTGTATAAGTGATGAACAAAGGAAAACAGCCGGGATAGTAATATTTTGTCTCATAGTTTGTTTTGATTTTTTGTTCTATGTGGCAATTGACATGTCTTTTTGTGCTGTTATATATGTCGCCAAAGATTACTTTCTTGTTCTTATAATATGTTTACCCTCCATGCTTCTTGCAGATACTAAAGGAAATGGGTCTGGCAAAAACATCATCATCAGCTGTAAATCTCTTGATAGATATTGGTATTTTCCTATACATGTCAATCTTGATTTGTTGAAGTTGAGAATTCCCACTGATCACTTGGAAGAGATCACATCAGCTGCTCAAAGTCTTCTATCAGATTCATCTGATCCAGACGAGATTAACAGGAAGAACCTTACTAACCTGAAGGTCTATGCCATTGATGTTGATGAAGCTGATGAGCTTGATGATGCTCTGAGTGCAACAAAGTTACAAGATGGTCGGATTAACATTTGGATACATGTTGCAGACGCAACTAGATATGTTCAACCTGGAAGTATTGTGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCTACATATTCTATGTTTCCAGAAAATCTTGCCATGGGAGCTATGAGTTTGAGACAAGGGGAGGTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATGACGATGGCAGCATTGCAGAATGTTCAGTGTTCAACTCAGTGATTAAACCAACGTACATGTTAACATATGAGAGCGCATCAGAGCTACTCAATTTGAACCTTGAAGAGGAGGTTGAACTTAGAATTTTGTCTGAGGCTGCAAATCTTCGGTTAAATTGGCGCCGCCAGCAGGGTGCAGTCGAGACAGCAACATTAGAAGCTCGCATCAAAGTGTCTAATCCAGAGGATCCAGAGCCATCAATAAACCTTTATGTAGAAAATCAGGCAGACCCTGCAATGCGATTAGTCTCTGAGATGATGATCCTCTGTGGCGAAGCTATAGCTACATTTGGATCTCGGAATAACATTCCTTTACCCTACAGGGGACAACCTCAATCAGATATAAATCTTTCTGAATTTTCCCATCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTAGTCAAGATAATGCGTGCAGCTGAAATTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACCTCTCCCATCCGTAGATATTTGGACCTTCTTGCTCATTATCAGATAAAGGCATTTCTTAGAGGCGAGCCTCCACCCTTTACATCTGGTAATCTCGAAGGTCTAGCAGCAGGTGTAAATGAGAAAGTTAGAGCAGTGAGGAAGCTCTCCAACAGTAGTCTCCGTTACTGGATACTAGAATACTTACGAAAACAACCAAAAGAGAGAAGATACCGTGCTTTAGTCCTTAAATTTTTGAAAGATCGCATTGCAGCTCTGTTGTTGGTTGAGGTTGGATTTCAAGCTACTGCTTGGGTCTCAGTTGGATCACAGATAGGGGATGAAGTAGTGGTTAAGGTTGAACAGTCACATCCACGTGACGATATTATTTATGTGAAGGAGGTTGTAAGAGGTTGA
Protein sequence

>Msa0544600

MAVRAVNTYPLLRSSSPSLSTVPRFLSPHRPPPSALRFHPPPSSSHVCHTQTRSIKSLFETVMEELQAKRKLRKKIVSVNASSSSNTELLNEEHVEDRLVKRSLQKGLLLEFKKDSDKILLAVAQRPDGKKNWMVSDQNGVTSSIKPQQVTYIVPGISNFDQADITHFVQKAQDNMDPSLLEFAWFELHEKNKSVTVEEMAEIIFGCVEPLESYSAHLLLSKDEIYFTILESKGLRCVYGPRPSEQVEELIRRKVAKEAAEKEFQDFIKLLGSAKSMPSHDKPSRSSWKDEEKIWSRIESLEAYAIDACISDEQRKTAGIVIFCLIVCFDFLFYVAIDMSFCAVIYVAKDYFLVLIICLPSMLLADTKGNGSGKNIIISCKSLDRYWYFPIHVNLDLLKLRIPTDHLEEITSAAQSLLSDSSDPDEINRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIHVADATRYVQPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLHDDGSIAECSVFNSVIKPTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQGAVETATLEARIKVSNPEDPEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPLPYRGQPQSDINLSEFSHLPEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQIKAFLRGEPPPFTSGNLEGLAAGVNEKVRAVRKLSNSSLRYWILEYLRKQPKERRYRALVLKFLKDRIAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIYVKEVVRG*