AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072130 MtrunA17_Chr1g0178981 96.099 974 32 2 1 974 1 968 0.0 1941
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072130 AT1G19485.1 42.174 920 398 25 59 961 3 805 0.0 630
Msa0072130 AT1G19485.2 42.174 920 398 25 59 961 3 805 0.0 630

Find 241 sgRNAs with CRISPR-Local

Find 805 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAATTGGTTCTCACAATT+TGG 0.152126 1_2:-44790925 None:intergenic
GTGAGAGATGGTTGTGCTTT+GGG 0.208094 1_2:+44799504 Msa0072130:CDS
ATTAAACGCAATTCTGCTTT+TGG 0.218518 1_2:-44799092 None:intergenic
CTCTAATATTGATAAGAAAA+TGG 0.221187 1_2:+44799565 Msa0072130:CDS
TGGTTCATCTTATCACAAAA+TGG 0.221693 1_2:+44790483 Msa0072130:CDS
TATGGTGTCTTCTAAATATC+AGG 0.232318 1_2:+44790539 Msa0072130:CDS
CCTCATGATTATTTACTTGC+TGG 0.237869 1_2:+44793860 Msa0072130:CDS
AATAATGGCCTACTTGTATC+TGG 0.238881 1_2:-44791219 None:intergenic
TCTTTGTGATGGTGATAATA+TGG 0.240883 1_2:+44799244 Msa0072130:CDS
TTATGCAATGCTGCCATCTT+AGG 0.244199 1_2:-44799455 None:intergenic
GATAATGAAAAGCCGGATTC+TGG 0.244429 1_2:+44799410 Msa0072130:CDS
GACATGAAGGCCTCAAGTTT+TGG 0.251482 1_2:+44796245 Msa0072130:CDS
TGTATTCGCAGCAGCTTTCT+TGG 0.251698 1_2:-44791061 None:intergenic
ACCTTTCACAAAAGGGATTA+AGG 0.259506 1_2:+44787499 Msa0072130:five_prime_UTR
GTATGCAGAAGCAGCTTTCT+TGG 0.268262 1_2:-44791133 None:intergenic
AGTGAGAGATGGTTGTGCTT+TGG 0.288593 1_2:+44799503 Msa0072130:CDS
ACTCTCTTGTTTGCAATTGC+AGG 0.291928 1_2:-44787596 None:intergenic
CCTCTTTCTTGCAGCTTCAA+TGG 0.294909 1_2:-44799037 None:intergenic
GCATTCTTTCCCTTTGTATT+CGG 0.294913 1_2:-44791111 None:intergenic
ATTAGGTTTACTTACGGAAT+TGG 0.296469 1_2:+44788520 Msa0072130:CDS
GGGCTATCTTGCTGTCTTGT+TGG 0.306280 1_2:+44791437 Msa0072130:CDS
CGTATTCATCTTATGCCATT+TGG 0.307057 1_2:+44798120 Msa0072130:CDS
TATTTACATATTCACATCTA+AGG 0.307570 1_2:-44799639 None:intergenic
GGCTATCTTGCTGTCTTGTT+GGG 0.307911 1_2:+44791438 Msa0072130:CDS
CCAGACTGTAAATGATTCTC+TGG 0.312361 1_2:-44797870 None:intergenic
AATATCCATCTAAAAGCATT+AGG 0.316447 1_2:+44788503 Msa0072130:CDS
CAGGGTTTGAATATCAGTTC+TGG 0.319518 1_2:+44787557 Msa0072130:five_prime_UTR
TTCTTCTTCCTCACAGAGTT+TGG 0.324804 1_2:-44787864 None:intergenic
AAAATGGGTGCCTCACTTAC+TGG 0.325896 1_2:+44790499 Msa0072130:CDS
TTTCTGCTACAGCTCAGTTT+TGG 0.338281 1_2:-44799320 None:intergenic
AACATTGAGCATTTGAATAC+AGG 0.343917 1_2:-44792822 None:intergenic
ATTTCTCCAGATGTAGTTCC+TGG 0.344586 1_2:+44790985 Msa0072130:CDS
CTCTTTCTTGCAGCTTCAAT+GGG 0.352650 1_2:-44799036 None:intergenic
GAACAGTAAGAGGAACAAAT+TGG 0.352749 1_2:-44790939 None:intergenic
GAAATAAATTCAGCTGAATC+TGG 0.353877 1_2:-44790967 None:intergenic
CTGAGGAAGCATTGTCTTCT+CGG 0.361974 1_2:+44799282 Msa0072130:CDS
TGCAGCCTTCGCCAAGCTAA+TGG 0.372323 1_2:-44798033 None:intergenic
TAAATAGTGTGGCAATAGTT+AGG 0.374286 1_2:-44787640 None:intergenic
CTTGTTGGGCAATGGATCTC+TGG 0.375077 1_2:+44791452 Msa0072130:CDS
TTCTCACACTGAATCAATAA+TGG 0.377014 1_2:-44791234 None:intergenic
CTTTCCAGTGTATATCGTTC+CGG 0.378783 1_2:-44798072 None:intergenic
ATACTTGGATTCTTGAGGTT+TGG 0.380840 1_2:-44788779 None:intergenic
GCAGAGGTGCCGTGCAAATA+TGG 0.381854 1_2:+44790521 Msa0072130:CDS
GTGTATATCGTTCCGGTGAC+AGG 0.384153 1_2:-44798065 None:intergenic
GCCCATGCAACTGTTCTAAT+AGG 0.389486 1_2:-44795162 None:intergenic
GTAGGTTGGATATTAATCAT+AGG 0.390058 1_2:+44791181 Msa0072130:CDS
GGGCATTTACCTTTCACAAA+AGG 0.395838 1_2:+44787491 Msa0072130:five_prime_UTR
ACTATTAAGTTAGAAGTCTC+TGG 0.395932 1_2:-44796214 None:intergenic
CCAGAGAATCATTTACAGTC+TGG 0.402777 1_2:+44797870 Msa0072130:CDS
GCGTTGTTTATCAACAGAAC+AGG 0.403768 1_2:+44787521 Msa0072130:five_prime_UTR
GTTCAAGTGTCACCGATAAC+AGG 0.413037 1_2:+44798146 Msa0072130:CDS
CCGAAAACAGTACCTGTTAT+CGG 0.414337 1_2:-44798158 None:intergenic
ACAAAGCCTATACTTTGTTT+CGG 0.415181 1_2:+44795126 Msa0072130:CDS
GGGAAAGGAGAGTTTGATAC+TGG 0.422684 1_2:-44799016 None:intergenic
GGCATTTACCTTTCACAAAA+GGG 0.424513 1_2:+44787492 Msa0072130:five_prime_UTR
TGATGGTGATAATATGGGTT+TGG 0.424625 1_2:+44799250 Msa0072130:CDS
TTAGGTTTACTTACGGAATT+GGG 0.426191 1_2:+44788521 Msa0072130:CDS
ATATCAAACAAAGAAACCTT+AGG 0.426697 1_2:-44787803 None:intergenic
GATGCTTGAGGTTCCAATAC+AGG 0.430718 1_2:-44791285 None:intergenic
AGGGTTTGAATATCAGTTCT+GGG 0.431046 1_2:+44787558 Msa0072130:five_prime_UTR
GCTGTTGCTGCTCATCCGCC+TGG 0.432574 1_2:+44790463 Msa0072130:CDS
CTTTGTGATGGTGATAATAT+GGG 0.434640 1_2:+44799245 Msa0072130:CDS
ATAATGAAAAGCCGGATTCT+GGG 0.437268 1_2:+44799411 Msa0072130:CDS
CTTGCTGTCTTGTTGGGCAA+TGG 0.437681 1_2:+44791444 Msa0072130:CDS
GAACTGCCAGGAACTACATC+TGG 0.439083 1_2:-44790991 None:intergenic
GTTCTGTATGGGCATTAGAT+TGG 0.440759 1_2:+44788994 Msa0072130:CDS
GCAAGAGCTGTGCTTTCAGC+TGG 0.441680 1_2:-44799350 None:intergenic
ACCACATGGTAGCCCTGTAT+TGG 0.442858 1_2:+44791272 Msa0072130:CDS
GCATCTGGTAGTGTCTCAAA+TGG 0.442876 1_2:+44790799 Msa0072130:CDS
AGGTGGCATGGGATGTCAAA+TGG 0.446867 1_2:+44791373 Msa0072130:CDS
TAATGGACTTGTACGTTGTC+AGG 0.453115 1_2:+44799532 Msa0072130:CDS
TTACTTGCTGGCTGCCATGA+TGG 0.453345 1_2:+44793872 Msa0072130:CDS
AGCCTATACTTTGTTTCGGT+GGG 0.453635 1_2:+44795130 Msa0072130:CDS
TGCAAAAGGAGGAGCAACTT+GGG 0.454385 1_2:+44788752 Msa0072130:CDS
TCAGGCTCCCCATGCATCCT+AGG 0.455090 1_2:-44789020 None:intergenic
TTCATCTGCCACTGTTCCTA+AGG 0.455578 1_2:+44788600 Msa0072130:CDS
ATTATCACTAACCCTTCAAA+AGG 0.457036 1_2:-44795186 None:intergenic
ATGCTACTCTTACCTGAAAA+CGG 0.460532 1_2:-44798468 None:intergenic
CGAGAATTTCTTTGAAGACA+TGG 0.460588 1_2:+44787832 Msa0072130:CDS
AAAAGCATTAGGTTTACTTA+CGG 0.463447 1_2:+44788514 Msa0072130:CDS
AGGAGCCTCAGAGGACGAAA+TGG 0.465031 1_2:-44797838 None:intergenic
CGACTTCCATTCTTTCTATG+TGG 0.466917 1_2:+44798953 Msa0072130:CDS
CCACCTTTCCATTATGAGCT+AGG 0.467563 1_2:-44791356 None:intergenic
ATGCAAAAGGAGGAGCAACT+TGG 0.467583 1_2:+44788751 Msa0072130:CDS
TCCTCATGCAAGCATCGAAT+GGG 0.467596 1_2:+44791417 Msa0072130:CDS
GTGTCATGCCTAGCTCATAA+TGG 0.467799 1_2:+44791348 Msa0072130:CDS
ATCATATCTCCCCGGGAAGA+AGG 0.467886 1_2:+44790579 Msa0072130:CDS
GTCCACCTAGGTAAAGTAAA+GGG 0.472023 1_2:+44787471 Msa0072130:five_prime_UTR
GCTCTCAGTGCATGAGGAAG+AGG 0.476909 1_2:-44792750 None:intergenic
GGTTCATCTTATCACAAAAT+GGG 0.477171 1_2:+44790484 Msa0072130:CDS
ACTGATCCACATAGAAAGAA+TGG 0.482260 1_2:-44798959 None:intergenic
TGAGAGATGGTTGTGCTTTG+GGG 0.482698 1_2:+44799505 Msa0072130:CDS
GGGCATTAGATTGGTGTCCT+AGG 0.483270 1_2:+44789003 Msa0072130:CDS
TTCCTCACAGAGTTTGGCAA+TGG 0.484283 1_2:-44787858 None:intergenic
TCTGGAAGTTGAACAGTAAG+AGG 0.486423 1_2:-44790949 None:intergenic
CTCTTTGATATTAAATAGTG+TGG 0.488495 1_2:-44787651 None:intergenic
CTATCCACTGCTATTACAGT+TGG 0.488965 1_2:-44790751 None:intergenic
ATCTTAGGAGGAAAGACTTC+GGG 0.492038 1_2:-44799440 None:intergenic
TCTTGTTGCAAGAAGTAGGT+TGG 0.499166 1_2:+44791167 Msa0072130:CDS
CCATTGAAGCTGCAAGAAAG+AGG 0.499192 1_2:+44799037 Msa0072130:CDS
TCGGGAGTAGTCCCAGAATC+CGG 0.499534 1_2:-44799422 None:intergenic
ATTGATTCAGTGTGAGAATG+AGG 0.501894 1_2:+44791239 Msa0072130:CDS
TGAATGTTGGAGGTTCTGTA+TGG 0.503920 1_2:+44788982 Msa0072130:CDS
ACAAATCGATAGAAATAAAG+AGG 0.505265 1_2:+44790635 Msa0072130:CDS
TCACATTTAACTGAACAATC+AGG 0.505566 1_2:-44789038 None:intergenic
TGTCCACCTAGGTAAAGTAA+AGG 0.506559 1_2:+44787470 Msa0072130:five_prime_UTR
GAATCATTTACAGTCTGGAT+TGG 0.508798 1_2:+44797875 Msa0072130:CDS
TGATTCTCTGGGAAGGTTGG+AGG 0.509208 1_2:-44797858 None:intergenic
TCTTGCAGCTTCAATGGGAA+AGG 0.509900 1_2:-44799031 None:intergenic
CGAAGTCTTTCCTCCTAAGA+TGG 0.511144 1_2:+44799442 Msa0072130:CDS
TTCCTATTAGAACAGTTGCA+TGG 0.511742 1_2:+44795160 Msa0072130:CDS
AAGAAACAACCTTGGTTGCA+TGG 0.512538 1_2:+44798092 Msa0072130:CDS
TGCAATGCTGCCATCTTAGG+AGG 0.515229 1_2:-44799452 None:intergenic
CTCATAATGGAAAGGTGGCA+TGG 0.517043 1_2:+44791361 Msa0072130:CDS
TGAGGAAGCATTGTCTTCTC+GGG 0.518917 1_2:+44799283 Msa0072130:CDS
TGACACTTGAACACTCCAAA+TGG 0.520023 1_2:-44798135 None:intergenic
AACAATGAAAACCATTAGCT+TGG 0.520423 1_2:+44798022 Msa0072130:CDS
TCAACTCCGGGAGTATTTGT+CGG 0.520616 1_2:-44799389 None:intergenic
TATCAAACAAAGAAACCTTA+GGG 0.521010 1_2:-44787802 None:intergenic
ACAGCTCTTGCTTGTAGAGA+TGG 0.522738 1_2:+44799362 Msa0072130:CDS
AAATGATTCTCTGGGAAGGT+TGG 0.522935 1_2:-44797861 None:intergenic
TAGGTTGGATATTAATCATA+GGG 0.524008 1_2:+44791182 Msa0072130:CDS
AAACTCTTGTTGCAAGAAGT+AGG 0.524383 1_2:+44791163 Msa0072130:CDS
AAAACGCTATCATCTCTTCA+AGG 0.525511 1_2:-44799588 None:intergenic
AAGCCTATACTTTGTTTCGG+TGG 0.531447 1_2:+44795129 Msa0072130:CDS
CTTAGGGTTAGCACCACTGC+TGG 0.532612 1_2:-44787786 None:intergenic
ATTGGTGTCCTAGGATGCAT+GGG 0.532952 1_2:+44789012 Msa0072130:CDS
TTCTTTCTAGGCCTTCCTCT+AGG 0.533374 1_2:-44790658 None:intergenic
CAAATTATACCGTTCCATCA+TGG 0.534327 1_2:-44793886 None:intergenic
TTCCTCATGCAAGCATCGAA+TGG 0.535078 1_2:+44791416 Msa0072130:CDS
GGGACCAAGTACATAGCATC+TGG 0.536684 1_2:+44790784 Msa0072130:CDS
ACTACCAGATGCTATGTACT+TGG 0.537317 1_2:-44790788 None:intergenic
GATTGGTGTCCTAGGATGCA+TGG 0.541625 1_2:+44789011 Msa0072130:CDS
CGGAGTTGATAATGAAAAGC+CGG 0.542156 1_2:+44799403 Msa0072130:CDS
CAGCAGTGGTGCTAACCCTA+AGG 0.543146 1_2:+44787787 Msa0072130:CDS
TCCTATTAGAACAGTTGCAT+GGG 0.543628 1_2:+44795161 Msa0072130:CDS
AAACCATACTTGGATTCTTG+AGG 0.544459 1_2:-44788784 None:intergenic
TCAGGCATGGTTGCATATTG+TGG 0.547666 1_2:+44798427 Msa0072130:intron
GCAAATGACCTCCCTGTCAC+CGG 0.549534 1_2:+44798053 Msa0072130:CDS
AGAGACTTTGTGATGAATGT+TGG 0.551861 1_2:+44788969 Msa0072130:intron
AAAGCTGCTGCGAATACAAA+GGG 0.552131 1_2:+44791066 Msa0072130:CDS
TTTGTTGCAGCTCTTTGTGA+TGG 0.553499 1_2:+44799233 Msa0072130:intron
AAAGCTGCTCCGAATACAAA+GGG 0.553544 1_2:+44791102 Msa0072130:CDS
ATAATGGCCTACTTGTATCT+GGG 0.555195 1_2:-44791218 None:intergenic
CATCTGGTAGTGTCTCAAAT+GGG 0.555891 1_2:+44790800 Msa0072130:CDS
TGCTGGCTGCCATGATGGAA+CGG 0.557319 1_2:+44793877 Msa0072130:CDS
TTAAATGTGCAGAGAATGGA+AGG 0.560081 1_2:+44788474 Msa0072130:intron
GCTACAGCGGCAAATGATGA+AGG 0.560213 1_2:+44787749 Msa0072130:CDS
GAGAGCAGTTTATACGCAGA+AGG 0.563777 1_2:+44792767 Msa0072130:CDS
CATCTTAGGAGGAAAGACTT+CGG 0.564444 1_2:-44799441 None:intergenic
GCCTATACTTTGTTTCGGTG+GGG 0.564923 1_2:+44795131 Msa0072130:CDS
TAGAAGACACCATATTTGCA+CGG 0.566075 1_2:-44790530 None:intergenic
AATTCTTCATCTAAATGTGA+TGG 0.566247 1_2:+44794967 Msa0072130:CDS
GTTGTAGCCCAGATACAAGT+AGG 0.566508 1_2:+44791211 Msa0072130:CDS
CGTTGTTTATCAACAGAACA+GGG 0.567059 1_2:+44787522 Msa0072130:five_prime_UTR
GACTTTGTGATGAATGTTGG+AGG 0.568156 1_2:+44788972 Msa0072130:CDS
GAAAGCTGCTCCGAATACAA+AGG 0.568270 1_2:+44791101 Msa0072130:CDS
TCCCCACCGAAACAAAGTAT+AGG 0.572203 1_2:-44795132 None:intergenic
AGCAGTTTATACGCAGAAGG+AGG 0.573083 1_2:+44792770 Msa0072130:CDS
TGCTGATGATTCTGCTACAG+CGG 0.574927 1_2:+44787736 Msa0072130:CDS
AGCAAGTAAATAATCATGAG+GGG 0.577811 1_2:-44793858 None:intergenic
CAGCATTGCATAAAGTGAGA+TGG 0.578502 1_2:+44799465 Msa0072130:CDS
AAATAAAGAGGCCTAGAGGA+AGG 0.580422 1_2:+44790647 Msa0072130:CDS
TGCCCTTTACTTTACCTAGG+TGG 0.580871 1_2:-44787473 None:intergenic
TGATGTTCATCAGAACTGCC+AGG 0.583511 1_2:-44791003 None:intergenic
GGTGCCTCACTTACTGGCAG+AGG 0.584837 1_2:+44790505 Msa0072130:CDS
ACTGACCACTCCACTGTCAG+TGG 0.585703 1_2:-44793830 None:intergenic
TCATAATGGAAAGGTGGCAT+GGG 0.586605 1_2:+44791362 Msa0072130:CDS
TGTATATCGTTCCGGTGACA+GGG 0.587304 1_2:-44798064 None:intergenic
AAGAAGTATCATATCTCCCC+GGG 0.588430 1_2:+44790572 Msa0072130:CDS
CAGCAAGTAAATAATCATGA+GGG 0.589131 1_2:-44793859 None:intergenic
GAATCCAACTGTAATAGCAG+TGG 0.589763 1_2:+44790747 Msa0072130:CDS
GAAAGCTGCTGCGAATACAA+AGG 0.590265 1_2:+44791065 Msa0072130:CDS
CAGTGGATAGTACAAATTGT+GGG 0.590541 1_2:+44790764 Msa0072130:CDS
ATGGTGTCTTCTAAATATCA+GGG 0.592032 1_2:+44790540 Msa0072130:CDS
CTCAAGACCTAAAATTTACG+TGG 0.594134 1_2:-44799613 None:intergenic
CAGACTGTAAATGATTCTCT+GGG 0.598089 1_2:-44797869 None:intergenic
ATGCTTGAGGTTCCAATACA+GGG 0.598484 1_2:-44791284 None:intergenic
GGGTTTGGAATCTGTATCTG+AGG 0.600826 1_2:+44799265 Msa0072130:CDS
TTATTTGAAATTGTCCACCT+AGG 0.601577 1_2:+44787459 Msa0072130:five_prime_UTR
GAAAACCATTAGCTTGGCGA+AGG 0.602327 1_2:+44798028 Msa0072130:CDS
GCAAATGATGAAGGTGGTGG+TGG 0.602662 1_2:+44787758 Msa0072130:CDS
TTGTATCAATTGCAGGTGGG+AGG 0.602833 1_2:+44792725 Msa0072130:intron
TCAGCATAATATGCAAAAGG+AGG 0.605517 1_2:+44788741 Msa0072130:intron
AAACAAGAGAGTAATGGAAG+AGG 0.607256 1_2:+44787607 Msa0072130:exon
GAAGAAGTATCATATCTCCC+CGG 0.607569 1_2:+44790571 Msa0072130:CDS
AAATGCCCTTTACTTTACCT+AGG 0.608444 1_2:-44787476 None:intergenic
GGCACCTCTGCCAGTAAGTG+AGG 0.611285 1_2:-44790509 None:intergenic
ATAGTAACCGCAGGACATGA+AGG 0.613215 1_2:+44796232 Msa0072130:CDS
GTCACCGGAACGATATACAC+TGG 0.613239 1_2:+44798068 Msa0072130:CDS
CTGTAAATGATTCTCTGGGA+AGG 0.613421 1_2:-44797865 None:intergenic
GAGGAATCAAGATTGCTAAG+AGG 0.614969 1_2:-44791399 None:intergenic
TCAGCTAACAACTAAATCAG+TGG 0.616202 1_2:+44798910 Msa0072130:intron
CCAGCAAGTAAATAATCATG+AGG 0.616229 1_2:-44793860 None:intergenic
AATTGCAAACAAGAGAGTAA+TGG 0.617423 1_2:+44787601 Msa0072130:exon
CCTAGCTCATAATGGAAAGG+TGG 0.620737 1_2:+44791356 Msa0072130:CDS
GCAGTTTATACGCAGAAGGA+GGG 0.621415 1_2:+44792771 Msa0072130:CDS
CAGAACTGATATTCAAACCC+TGG 0.624538 1_2:-44787556 None:intergenic
GCAGTGGATAGTACAAATTG+TGG 0.626003 1_2:+44790763 Msa0072130:CDS
GAGAGATGGTTGTGCTTTGG+GGG 0.626750 1_2:+44799506 Msa0072130:CDS
ATGCCTAGCTCATAATGGAA+AGG 0.628963 1_2:+44791353 Msa0072130:CDS
TTAACAAGGGTAGTGAGAGA+TGG 0.634556 1_2:+44799492 Msa0072130:CDS
GCCCATTCGATGCTTGCATG+AGG 0.635290 1_2:-44791418 None:intergenic
TAAACTGCTCTCAGTGCATG+AGG 0.635449 1_2:-44792756 None:intergenic
TCACAGCATTCCACTGACAG+TGG 0.636573 1_2:+44793820 Msa0072130:intron
GTAATCCATTTCGTCCTCTG+AGG 0.636836 1_2:+44797833 Msa0072130:intron
CTTGAGGCCTTCATGTCCTG+CGG 0.638879 1_2:-44796239 None:intergenic
GTTGCATATTGTGGTGCAGA+CGG 0.639024 1_2:+44798436 Msa0072130:CDS
ATGTGGATCAGTGACTGAAG+AGG 0.639441 1_2:+44798970 Msa0072130:CDS
GCTAGGCATGACACAACTCT+AGG 0.640886 1_2:-44791339 None:intergenic
GAATGTTGGAGGTTCTGTAT+GGG 0.641333 1_2:+44788983 Msa0072130:CDS
TCTAACTTAATAGTAACCGC+AGG 0.643606 1_2:+44796223 Msa0072130:CDS
GGTGCACCGACAAATACTCC+CGG 0.644237 1_2:+44799383 Msa0072130:CDS
ATGGGACAAGTAGATGCTTG+AGG 0.647867 1_2:-44791297 None:intergenic
GCAAAAGGAGGAGCAACTTG+GGG 0.648508 1_2:+44788753 Msa0072130:CDS
ACACTGGAAAGAAACAACCT+TGG 0.652297 1_2:+44798084 Msa0072130:CDS
ATAGAAATAAAGAGGCCTAG+AGG 0.655432 1_2:+44790643 Msa0072130:CDS
GTGAGATGGAACATTAACAA+GGG 0.656102 1_2:+44799479 Msa0072130:CDS
GAAGGTTGGAGGAGCCTCAG+AGG 0.658311 1_2:-44797847 None:intergenic
TGGATTGGCAGTCAAAGCCA+AGG 0.660146 1_2:+44797890 Msa0072130:CDS
AGTGAGATGGAACATTAACA+AGG 0.663871 1_2:+44799478 Msa0072130:CDS
TACGTAGTACCATGCAACCA+AGG 0.666142 1_2:-44798101 None:intergenic
GCGGCAAATGATGAAGGTGG+TGG 0.666480 1_2:+44787755 Msa0072130:CDS
GCATTCCACTGACAGTGGAG+TGG 0.668981 1_2:+44793825 Msa0072130:intron
GGTGGTGGTAGTACCAGCAG+TGG 0.670189 1_2:+44787773 Msa0072130:CDS
TGATTGTTCAGTTAAATGTG+AGG 0.671600 1_2:+44789040 Msa0072130:CDS
CACCATTGCCAAACTCTGTG+AGG 0.675280 1_2:+44787856 Msa0072130:CDS
GCAAGTAAATAATCATGAGG+GGG 0.677289 1_2:-44793857 None:intergenic
TGGCATGGGATGTCAAATGG+AGG 0.678240 1_2:+44791376 Msa0072130:CDS
TGAAACGTGGCAGCTTACAG+AGG 0.684971 1_2:+44792844 Msa0072130:CDS
TCCAATACAGGGCTACCATG+TGG 0.685481 1_2:-44791273 None:intergenic
GACTTGTACCTTAGGAACAG+TGG 0.686551 1_2:-44788608 None:intergenic
TTTATATGTAGGTTGCTCTG+TGG 0.688819 1_2:+44794932 Msa0072130:intron
GAGGCAAATCATCAACCACA+TGG 0.705993 1_2:+44791258 Msa0072130:CDS
AAATGCTCAATGTTGAAACG+TGG 0.713740 1_2:+44792831 Msa0072130:CDS
TTGGTGTCCTAGGATGCATG+GGG 0.719461 1_2:+44789013 Msa0072130:CDS
ACCGTAGGTCCCAAAACTTG+AGG 0.731840 1_2:-44796255 None:intergenic
TTGTGATAAGATGAACCAGG+CGG 0.737973 1_2:-44790478 None:intergenic
ACAGCGGCAAATGATGAAGG+TGG 0.745146 1_2:+44787752 Msa0072130:CDS
ATATCGTTCCGGTGACAGGG+AGG 0.770381 1_2:-44798061 None:intergenic
ACAGTGGCAGATGAAAACTG+AGG 0.800494 1_2:-44788592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTACTCAA+GGG - chr1_2:44793439-44793458 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTACTCA+AGG - chr1_2:44793440-44793459 None:intergenic 10.0%
!!! ATTCTAATTTTTAACATTAA+TGG - chr1_2:44793648-44793667 None:intergenic 10.0%
!!! AAATAAATTGTTTTATATGT+AGG + chr1_2:44794921-44794940 Msa0072130:intron 10.0%
!! AATAAGTTAAATAAATCATA+TGG - chr1_2:44795846-44795865 None:intergenic 10.0%
!!! TAAGTATATATTTTGCTTTT+AGG + chr1_2:44788658-44788677 Msa0072130:intron 15.0%
!! TAAAAGGATTTAGATTTAAA+TGG + chr1_2:44789746-44789765 Msa0072130:intron 15.0%
!! TTTACTACATATATGAATAT+AGG - chr1_2:44790337-44790356 None:intergenic 15.0%
!! ACAAATTAACAATTTATCAA+TGG - chr1_2:44792592-44792611 None:intergenic 15.0%
!!! TAATTTTTAACATTAATGGT+GGG - chr1_2:44793644-44793663 None:intergenic 15.0%
!! AAATTAGAATCACTTAAAAA+AGG + chr1_2:44793658-44793677 Msa0072130:intron 15.0%
!!! TAATATATGTTTTTATAGAC+TGG + chr1_2:44793765-44793784 Msa0072130:intron 15.0%
!! ATTTATGATTTATATCACTT+AGG - chr1_2:44794042-44794061 None:intergenic 15.0%
!! TAAGTGATATAAATCATAAA+TGG + chr1_2:44794041-44794060 Msa0072130:intron 15.0%
!! TATCTTATATTGTATAAAAG+CGG + chr1_2:44794201-44794220 Msa0072130:intron 15.0%
!!! CAGTAATGTTTTTATTTTTA+TGG - chr1_2:44795609-44795628 None:intergenic 15.0%
!! AATATAAATTATAGCAGTTA+TGG - chr1_2:44795633-44795652 None:intergenic 15.0%
!! AATACTATTAAACATTTCAA+AGG - chr1_2:44796166-44796185 None:intergenic 15.0%
!! TTGAAATGTTTAATAGTATT+TGG + chr1_2:44796166-44796185 Msa0072130:intron 15.0%
!!! TATGTTTTGAGTTTAAATTT+GGG + chr1_2:44796651-44796670 Msa0072130:intron 15.0%
!! TTTAAATTTGAAAAAGAACA+TGG + chr1_2:44796780-44796799 Msa0072130:intron 15.0%
!!! GTCATAATTATTTTTATTCT+GGG - chr1_2:44798870-44798889 None:intergenic 15.0%
!!! AGTCATAATTATTTTTATTC+TGG - chr1_2:44798871-44798890 None:intergenic 15.0%
!!! AGGGAATTTTTTTTTTTTTT+TGG - chr1_2:44799746-44799765 None:intergenic 15.0%
!! TCTTCAAGTAAATATTTGAT+TGG - chr1_2:44788291-44788310 None:intergenic 20.0%
!! AATCAAATATTTACTTGAAG+AGG + chr1_2:44788290-44788309 Msa0072130:intron 20.0%
!! ATCAAATATTTACTTGAAGA+GGG + chr1_2:44788291-44788310 Msa0072130:intron 20.0%
!! TTTATTCAATGACATTTCTA+TGG + chr1_2:44788830-44788849 Msa0072130:intron 20.0%
!!! TTATTGTTTTGTTACTTCTT+TGG + chr1_2:44789118-44789137 Msa0072130:intron 20.0%
!!! TATTGTTTTGTTACTTCTTT+GGG + chr1_2:44789119-44789138 Msa0072130:intron 20.0%
!!! AGATTTTATTTGAAGTTTGA+TGG + chr1_2:44789225-44789244 Msa0072130:intron 20.0%
!!! TATTGTTCTTTTAAGAGTTA+AGG + chr1_2:44789284-44789303 Msa0072130:intron 20.0%
!!! ATTGTTCTTTTAAGAGTTAA+GGG + chr1_2:44789285-44789304 Msa0072130:intron 20.0%
!! TTCTTAAATTGTGTTGAATT+TGG - chr1_2:44789443-44789462 None:intergenic 20.0%
!!! TCAACACAATTTAAGAATTT+TGG + chr1_2:44789446-44789465 Msa0072130:intron 20.0%
!!! TTTCATTGTTATTTGTTTCA+TGG - chr1_2:44789474-44789493 None:intergenic 20.0%
!!! AGCACATATTTTTGAAAAAA+TGG + chr1_2:44789649-44789668 Msa0072130:intron 20.0%
!!! TTTTATTCCAAACTGTTAAA+AGG + chr1_2:44789730-44789749 Msa0072130:intron 20.0%
!! TTTATCACTAGAAATGATTT+AGG + chr1_2:44789769-44789788 Msa0072130:intron 20.0%
!!! TTTTGTACTAAATAGTATAC+CGG + chr1_2:44789899-44789918 Msa0072130:intron 20.0%
!! CATAATTAACAAAAGGATTT+AGG - chr1_2:44790164-44790183 None:intergenic 20.0%
!!! AATCCTTTTGTTAATTATGA+TGG + chr1_2:44790165-44790184 Msa0072130:intron 20.0%
!! TTACATACAAGAGTAAAAAA+AGG + chr1_2:44790854-44790873 Msa0072130:CDS 20.0%
!!! ACAACAATTTTCTAATACAA+AGG + chr1_2:44791029-44791048 Msa0072130:CDS 20.0%
!!! CAACAATTTTCTAATACAAA+GGG + chr1_2:44791030-44791049 Msa0072130:CDS 20.0%
!! TATCATCTTTATTAGATTTG+AGG + chr1_2:44791583-44791602 Msa0072130:intron 20.0%
!! AAAAGTTGAATAAGACATAA+TGG + chr1_2:44791693-44791712 Msa0072130:intron 20.0%
!! TTCATTAAAATTTCAGTGAT+TGG + chr1_2:44792611-44792630 Msa0072130:intron 20.0%
!! AAATCACAGATAGTAATAAA+AGG - chr1_2:44792659-44792678 None:intergenic 20.0%
!! AACAAATTTGTAATAGACAT+TGG + chr1_2:44793172-44793191 Msa0072130:intron 20.0%
!! ATAAGAATACTTTGTAGAAA+TGG + chr1_2:44793363-44793382 Msa0072130:intron 20.0%
!!! TTTATTTAAATTTTTTGCCC+AGG + chr1_2:44793526-44793545 Msa0072130:intron 20.0%
!!! CTAATTTTTAACATTAATGG+TGG - chr1_2:44793645-44793664 None:intergenic 20.0%
!! AGGTAAATTTCATTTAAGAA+AGG - chr1_2:44793944-44793963 None:intergenic 20.0%
!!! AGGTAAAATTTTTGTAAGAT+AGG + chr1_2:44793997-44794016 Msa0072130:intron 20.0%
!! TATAGAATTTGTCTTTGATT+TGG + chr1_2:44794124-44794143 Msa0072130:intron 20.0%
!!! TGCATGATATTTTATTATGA+AGG + chr1_2:44794736-44794755 Msa0072130:intron 20.0%
!! GATACAGAATTATTACATAA+AGG - chr1_2:44794814-44794833 None:intergenic 20.0%
!!! ATGTTTTTATTTTTATGGCT+TGG - chr1_2:44795604-44795623 None:intergenic 20.0%
!! TATATTTGTTCTCTAATAAG+AGG + chr1_2:44795647-44795666 Msa0072130:intron 20.0%
!! AAGTTAAATAAATCATATGG+AGG - chr1_2:44795843-44795862 None:intergenic 20.0%
!! AGTAATCTTCATAAAAACAA+GGG - chr1_2:44796057-44796076 None:intergenic 20.0%
!! AAGTAATCTTCATAAAAACA+AGG - chr1_2:44796058-44796077 None:intergenic 20.0%
!!! TCTTTGTATTTGTTGAAATT+TGG + chr1_2:44796329-44796348 Msa0072130:intron 20.0%
!!! CTTTGTATTTGTTGAAATTT+GGG + chr1_2:44796330-44796349 Msa0072130:intron 20.0%
!!! TAATAAAAAAAGCGTATAGA+CGG - chr1_2:44796499-44796518 None:intergenic 20.0%
!!! GTATGTTTTGAGTTTAAATT+TGG + chr1_2:44796650-44796669 Msa0072130:intron 20.0%
!! TAAATCTACACCATAATTAA+AGG - chr1_2:44796752-44796771 None:intergenic 20.0%
!!! AACAACCATATTTTTTTGAA+GGG - chr1_2:44796819-44796838 None:intergenic 20.0%
!!! TAACAACCATATTTTTTTGA+AGG - chr1_2:44796820-44796839 None:intergenic 20.0%
!! TCAAAAAAATATGGTTGTTA+AGG + chr1_2:44796820-44796839 Msa0072130:intron 20.0%
!!! TATTGCAAATTTAAAACTGA+TGG + chr1_2:44797244-44797263 Msa0072130:intron 20.0%
!! ATAGTTGTAATTTCTAATCA+AGG - chr1_2:44797722-44797741 None:intergenic 20.0%
!!! TTGTTTCTTTTAGAAAAAAC+TGG + chr1_2:44798216-44798235 Msa0072130:intron 20.0%
!!! TGTTTCTTTTAGAAAAAACT+GGG + chr1_2:44798217-44798236 Msa0072130:intron 20.0%
!!! ACAGTTTTAAAAGAAAATGA+GGG - chr1_2:44798714-44798733 None:intergenic 20.0%
!!! TAATTATTTTTATTCTGGGA+TGG - chr1_2:44798866-44798885 None:intergenic 20.0%
!! CTCTAATATTGATAAGAAAA+TGG + chr1_2:44799565-44799584 Msa0072130:CDS 20.0%
!! TATTTACATATTCACATCTA+AGG - chr1_2:44799642-44799661 None:intergenic 20.0%
! CTCTTTGATATTAAATAGTG+TGG - chr1_2:44787654-44787673 None:intergenic 25.0%
! TATCAAACAAAGAAACCTTA+GGG - chr1_2:44787805-44787824 None:intergenic 25.0%
! ATATCAAACAAAGAAACCTT+AGG - chr1_2:44787806-44787825 None:intergenic 25.0%
! ATCATACCTTAAAAAAGTGA+CGG - chr1_2:44787936-44787955 None:intergenic 25.0%
! ATAATCATTGAATGACTAAG+TGG + chr1_2:44788246-44788265 Msa0072130:intron 25.0%
! ATGGTCAACCAAAAAATTAA+GGG - chr1_2:44788455-44788474 None:intergenic 25.0%
! AATGGTCAACCAAAAAATTA+AGG - chr1_2:44788456-44788475 None:intergenic 25.0%
!!! AATATCCATCTAAAAGCATT+AGG + chr1_2:44788503-44788522 Msa0072130:CDS 25.0%
!!! AAAAGCATTAGGTTTACTTA+CGG + chr1_2:44788514-44788533 Msa0072130:CDS 25.0%
!! TTTTCAGCATAATATGCAAA+AGG + chr1_2:44788738-44788757 Msa0072130:intron 25.0%
! AGTTAATATCAAACCATACT+TGG - chr1_2:44788797-44788816 None:intergenic 25.0%
!!! GATATTAACTTATTTTGTCG+TGG + chr1_2:44788807-44788826 Msa0072130:intron 25.0%
!! TCTAAATCCTTTTAACAGTT+TGG - chr1_2:44789740-44789759 None:intergenic 25.0%
! TTTGTACTAAATAGTATACC+GGG + chr1_2:44789900-44789919 Msa0072130:intron 25.0%
! AAAAAAAGTGAACGACAAAA+AGG - chr1_2:44790013-44790032 None:intergenic 25.0%
! TCTCCATCATAATTAACAAA+AGG - chr1_2:44790171-44790190 None:intergenic 25.0%
! TATCCAAATAGGTATATGTA+TGG - chr1_2:44790280-44790299 None:intergenic 25.0%
! ACAAATCGATAGAAATAAAG+AGG + chr1_2:44790635-44790654 Msa0072130:CDS 25.0%
!!! CTTTTTCTCTTGTTTGTAAT+AGG - chr1_2:44790712-44790731 None:intergenic 25.0%
! ATTACAAACAAGAGAAAAAG+AGG + chr1_2:44790712-44790731 Msa0072130:CDS 25.0%
!!! ATTACAGTTGGATTCTTTTT+TGG - chr1_2:44790742-44790761 None:intergenic 25.0%
!! CCATCTTTTGAATTCTTTTT+CGG - chr1_2:44790892-44790911 None:intergenic 25.0%
!! TAGGTTGGATATTAATCATA+GGG + chr1_2:44791182-44791201 Msa0072130:CDS 25.0%
!! GATTTGAGGTATTTGAAATT+TGG + chr1_2:44791597-44791616 Msa0072130:intron 25.0%
! AACTACTTCAATAGACAATT+AGG + chr1_2:44791725-44791744 Msa0072130:intron 25.0%
! ACTACTTCAATAGACAATTA+GGG + chr1_2:44791726-44791745 Msa0072130:intron 25.0%
! AAAAACTTCTTATGTTCCAT+AGG - chr1_2:44791789-44791808 None:intergenic 25.0%
! GTTTACTTTATGATAAGCAT+TGG - chr1_2:44791818-44791837 None:intergenic 25.0%
! ATTTATCATAACATTGACCT+GGG - chr1_2:44791840-44791859 None:intergenic 25.0%
! AATTTATCATAACATTGACC+TGG - chr1_2:44791841-44791860 None:intergenic 25.0%
! TTGATTAAGCTAGTTATCTT+TGG + chr1_2:44791921-44791940 Msa0072130:intron 25.0%
!! TGTAATTTTACTTACAGCAT+AGG - chr1_2:44791971-44791990 None:intergenic 25.0%
! TATTGCAACTATTTACTTAC+TGG - chr1_2:44792031-44792050 None:intergenic 25.0%
! TGAATCTACATGAAAAGAAT+CGG - chr1_2:44792061-44792080 None:intergenic 25.0%
!! GTTTTTATTCGTCAAATTCA+TGG + chr1_2:44792158-44792177 Msa0072130:intron 25.0%
!! AAAGGGGATGAATATTATTT+TGG - chr1_2:44792398-44792417 None:intergenic 25.0%
!! TATTACTATCTGTGATTTTG+AGG + chr1_2:44792661-44792680 Msa0072130:intron 25.0%
! ATTATACTTGTATCAATTGC+AGG + chr1_2:44792718-44792737 Msa0072130:intron 25.0%
!! AGATCCTCGTTTTATAAAAT+TGG + chr1_2:44792797-44792816 Msa0072130:CDS 25.0%
! TTCCTCTATTCTAACTATAA+CGG + chr1_2:44792872-44792891 Msa0072130:intron 25.0%
! ATTTGTTCAAAAACGTAGAT+GGG - chr1_2:44792906-44792925 None:intergenic 25.0%
!! AATTTGTTCAAAAACGTAGA+TGG - chr1_2:44792907-44792926 None:intergenic 25.0%
! CTTCTTAAAAATGCAAGATA+AGG - chr1_2:44793008-44793027 None:intergenic 25.0%
!!! TTTTTAAGAAGTCGATTAGA+TGG + chr1_2:44793017-44793036 Msa0072130:intron 25.0%
!!! TCAAAGATTTGTTGAAAAGA+AGG - chr1_2:44793101-44793120 None:intergenic 25.0%
! ACATTGGAACACAAATTAAT+AGG + chr1_2:44793188-44793207 Msa0072130:intron 25.0%
! ATTATGCTTGTAAAAAACAG+TGG + chr1_2:44793258-44793277 Msa0072130:intron 25.0%
!!! TGATGTTTTTAAGTTTTCCT+GGG - chr1_2:44793546-44793565 None:intergenic 25.0%
!!! TTGATGTTTTTAAGTTTTCC+TGG - chr1_2:44793547-44793566 None:intergenic 25.0%
! ACAGAAAATTCAATTCAGTA+AGG - chr1_2:44793608-44793627 None:intergenic 25.0%
! TTAGAATCACTTAAAAAAGG+TGG + chr1_2:44793661-44793680 Msa0072130:intron 25.0%
! TCATTTAAGAAAGGAAAAGA+AGG - chr1_2:44793935-44793954 None:intergenic 25.0%
! TTTACCTTGCTTTAGTAATA+TGG + chr1_2:44793957-44793976 Msa0072130:intron 25.0%
! TATTCCATATTACTAAAGCA+AGG - chr1_2:44793964-44793983 None:intergenic 25.0%
! AAGACCAAAATATCAAGAAA+CGG + chr1_2:44794289-44794308 Msa0072130:intron 25.0%
!! TCCATTGAACTTTTTAATGA+AGG + chr1_2:44794324-44794343 Msa0072130:intron 25.0%
! TCCTTCATTAAAAAGTTCAA+TGG - chr1_2:44794328-44794347 None:intergenic 25.0%
!! CTATTACTTCAGAAATTTTG+TGG - chr1_2:44794394-44794413 None:intergenic 25.0%
!!! CAAAATTTCTGAAGTAATAG+AGG + chr1_2:44794394-44794413 Msa0072130:intron 25.0%
!! GAATTATTACATAAAGGTGT+AGG - chr1_2:44794808-44794827 None:intergenic 25.0%
! AATTCTTCATCTAAATGTGA+TGG + chr1_2:44794967-44794986 Msa0072130:CDS 25.0%
! AGAAACTGATAGTCATAATT+AGG + chr1_2:44795261-44795280 Msa0072130:intron 25.0%
! TGAATAATTCTGTTTAACAG+TGG + chr1_2:44795310-44795329 Msa0072130:intron 25.0%
! CATATTTAAAAAGGGAAATC+TGG + chr1_2:44795345-44795364 Msa0072130:intron 25.0%
!! AGAATAAGCTCTCTAATTTT+TGG - chr1_2:44795467-44795486 None:intergenic 25.0%
! TTTACCAATGAATTTGATGA+GGG - chr1_2:44795774-44795793 None:intergenic 25.0%
! ATTTACCAATGAATTTGATG+AGG - chr1_2:44795775-44795794 None:intergenic 25.0%
! ATGGAGGAATTAAATAGATT+AGG - chr1_2:44795827-44795846 None:intergenic 25.0%
! GAAGATTACTTCAATAAACA+AGG + chr1_2:44796067-44796086 Msa0072130:intron 25.0%
! TTCAGATGTAAGATATTTGT+CGG - chr1_2:44796108-44796127 None:intergenic 25.0%
! TTAAACATTTCAAAGGTAAG+AGG - chr1_2:44796159-44796178 None:intergenic 25.0%
! CTATCGTTCAAAAAGAAATA+AGG - chr1_2:44796293-44796312 None:intergenic 25.0%
!!! CTTATTTCTTTTTGAACGAT+AGG + chr1_2:44796291-44796310 Msa0072130:intron 25.0%
!! AATAAAAAAAGCGTATAGAC+GGG - chr1_2:44796498-44796517 None:intergenic 25.0%
!! GACTAGTTAATAAATTTGGT+TGG - chr1_2:44796720-44796739 None:intergenic 25.0%
!! CCAAGACTAGTTAATAAATT+TGG - chr1_2:44796724-44796743 None:intergenic 25.0%
!! CCAAATTTATTAACTAGTCT+TGG + chr1_2:44796721-44796740 Msa0072130:intron 25.0%
! AAAAATATGGTTGTTAAGGA+TGG + chr1_2:44796824-44796843 Msa0072130:intron 25.0%
! AGTTCTCTTTGTATATAGAT+TGG + chr1_2:44796876-44796895 Msa0072130:intron 25.0%
! GATCTAGAAAATCAAAATGT+CGG + chr1_2:44797083-44797102 Msa0072130:intron 25.0%
!! ACAAAAAAGTGATTTGAAGT+AGG - chr1_2:44797312-44797331 None:intergenic 25.0%
!!! TGATCAGAATTGCTTTTATT+TGG + chr1_2:44797345-44797364 Msa0072130:intron 25.0%
!! TAGAATGTATTTTACTGCTA+AGG + chr1_2:44797371-44797390 Msa0072130:intron 25.0%
!! GTTTTTATCTTTTTGTGAAG+TGG + chr1_2:44797466-44797485 Msa0072130:intron 25.0%
! ATATGATCCAGTTAAAATCA+TGG - chr1_2:44797920-44797939 None:intergenic 25.0%
! GTTGCATACTATGAAAAATA+CGG + chr1_2:44798257-44798276 Msa0072130:intron 25.0%
!! CATTGAGTCATTTCTTTTAA+GGG - chr1_2:44798650-44798669 None:intergenic 25.0%
!! TCATTGAGTCATTTCTTTTA+AGG - chr1_2:44798651-44798670 None:intergenic 25.0%
! TTAAAAGAAATGACTCAATG+AGG + chr1_2:44798650-44798669 Msa0072130:intron 25.0%
!!! CACAGTTTTAAAAGAAAATG+AGG - chr1_2:44798715-44798734 None:intergenic 25.0%
! AAAATTCATGTACCTAATCA+AGG - chr1_2:44798833-44798852 None:intergenic 25.0%
!! GTTTTATCCACGTAAATTTT+AGG + chr1_2:44799606-44799625 Msa0072130:three_prime_UTR 25.0%
! TGTAAAAACTTATTATCCTC+TGG + chr1_2:44799714-44799733 Msa0072130:three_prime_UTR 25.0%
! TTATTTGAAATTGTCCACCT+AGG + chr1_2:44787459-44787478 Msa0072130:five_prime_UTR 30.0%
AATTGCAAACAAGAGAGTAA+TGG + chr1_2:44787601-44787620 Msa0072130:exon 30.0%
TAAATAGTGTGGCAATAGTT+AGG - chr1_2:44787643-44787662 None:intergenic 30.0%
GAAAAAGAAGAAAAAGACGA+AGG + chr1_2:44787691-44787710 Msa0072130:CDS 30.0%
!!! TTTCTTCCGTCACTTTTTTA+AGG + chr1_2:44787927-44787946 Msa0072130:CDS 30.0%
GTTAATCTGTTGTGAAGAAA+TGG + chr1_2:44787999-44788018 Msa0072130:intron 30.0%
TTATAACCAACTCAAAGAGT+TGG - chr1_2:44788165-44788184 None:intergenic 30.0%
!! AACTCTTTGAGTTGGTTATA+AGG + chr1_2:44788164-44788183 Msa0072130:intron 30.0%
GATTGGATAGACATAATTGT+AGG - chr1_2:44788274-44788293 None:intergenic 30.0%
AATATTTACTTGAAGAGGGA+AGG + chr1_2:44788295-44788314 Msa0072130:intron 30.0%
ATATTTACTTGAAGAGGGAA+GGG + chr1_2:44788296-44788315 Msa0072130:intron 30.0%
CAAAAAATTAAGGGGTTGTT+TGG - chr1_2:44788446-44788465 None:intergenic 30.0%
!!! CAAACAACCCCTTAATTTTT+TGG + chr1_2:44788444-44788463 Msa0072130:intron 30.0%
TGGTCAACCAAAAAATTAAG+GGG - chr1_2:44788454-44788473 None:intergenic 30.0%
! GTAAACCTAATGCTTTTAGA+TGG - chr1_2:44788511-44788530 None:intergenic 30.0%
ATTAGGTTTACTTACGGAAT+TGG + chr1_2:44788520-44788539 Msa0072130:CDS 30.0%
TTAGGTTTACTTACGGAATT+GGG + chr1_2:44788521-44788540 Msa0072130:CDS 30.0%
ATATACTATAACTTCATGCC+TGG - chr1_2:44788638-44788657 None:intergenic 30.0%
! TCGCTGATTATTGTTTAACT+TGG + chr1_2:44788927-44788946 Msa0072130:intron 30.0%
TCACATTTAACTGAACAATC+AGG - chr1_2:44789041-44789060 None:intergenic 30.0%
TGATTGTTCAGTTAAATGTG+AGG + chr1_2:44789040-44789059 Msa0072130:CDS 30.0%
!! AGTCAATTCTGTCTTTTTCA+TGG + chr1_2:44789172-44789191 Msa0072130:intron 30.0%
!! TTATTTGAAGTTTGATGGTG+AGG + chr1_2:44789230-44789249 Msa0072130:intron 30.0%
TAGCAGTAAAACATAGTGTA+CGG + chr1_2:44789353-44789372 Msa0072130:intron 30.0%
TACGGCATATATTATAAGCA+AGG + chr1_2:44789371-44789390 Msa0072130:intron 30.0%
ACGGCATATATTATAAGCAA+GGG + chr1_2:44789372-44789391 Msa0072130:intron 30.0%
ACATAATTGTAGAATAGAGG+TGG + chr1_2:44789397-44789416 Msa0072130:intron 30.0%
ATTAACCTAAAGGATTCAAG+TGG + chr1_2:44789503-44789522 Msa0072130:intron 30.0%
TTAACCTAAAGGATTCAAGT+GGG + chr1_2:44789504-44789523 Msa0072130:intron 30.0%
AATGCGTTAAAGAGAAAGTT+TGG + chr1_2:44789624-44789643 Msa0072130:intron 30.0%
ATGCGTTAAAGAGAAAGTTT+GGG + chr1_2:44789625-44789644 Msa0072130:intron 30.0%
TTGTACTAAATAGTATACCG+GGG + chr1_2:44789901-44789920 Msa0072130:intron 30.0%
AATAGGTATATGTATGGAGT+AGG - chr1_2:44790274-44790293 None:intergenic 30.0%
ACTCCATACATATACCTATT+TGG + chr1_2:44790274-44790293 Msa0072130:intron 30.0%
!! TACCTATTTGGATAGTTTTG+TGG + chr1_2:44790286-44790305 Msa0072130:intron 30.0%
TAAACCAAGTATCAGAAAGA+AGG - chr1_2:44790436-44790455 None:intergenic 30.0%
! ATTTTGTGATAAGATGAACC+AGG - chr1_2:44790484-44790503 None:intergenic 30.0%
TGGTTCATCTTATCACAAAA+TGG + chr1_2:44790483-44790502 Msa0072130:CDS 30.0%
GGTTCATCTTATCACAAAAT+GGG + chr1_2:44790484-44790503 Msa0072130:CDS 30.0%
TATGGTGTCTTCTAAATATC+AGG + chr1_2:44790539-44790558 Msa0072130:CDS 30.0%
ATGGTGTCTTCTAAATATCA+GGG + chr1_2:44790540-44790559 Msa0072130:CDS 30.0%
! TTTTCAGTAGGATTCTTTCT+AGG - chr1_2:44790673-44790692 None:intergenic 30.0%
AAGAGTAAAAAAAGGCCTAA+AGG + chr1_2:44790862-44790881 Msa0072130:CDS 30.0%
CCGAAAAAGAATTCAAAAGA+TGG + chr1_2:44790889-44790908 Msa0072130:CDS 30.0%
! ACAAATTGGTTCTCACAATT+TGG - chr1_2:44790928-44790947 None:intergenic 30.0%
GAAATAAATTCAGCTGAATC+TGG - chr1_2:44790970-44790989 None:intergenic 30.0%
! GTAGGTTGGATATTAATCAT+AGG + chr1_2:44791181-44791200 Msa0072130:CDS 30.0%
TTCTCACACTGAATCAATAA+TGG - chr1_2:44791237-44791256 None:intergenic 30.0%
! AATGCTACATTTTGTGGAAT+GGG - chr1_2:44791318-44791337 None:intergenic 30.0%
TGAACAGAAAATGGAGAATA+AGG - chr1_2:44791497-44791516 None:intergenic 30.0%
! CTTATTCAACTTTTCATGAG+AGG - chr1_2:44791687-44791706 None:intergenic 30.0%
! GGAACATAAGAAGTTTTTCT+CGG + chr1_2:44791791-44791810 Msa0072130:intron 30.0%
! CTTTTCATGTAGATTCAACT+AGG + chr1_2:44792064-44792083 Msa0072130:intron 30.0%
! TTTTATGTTTGCCGTTGAAA+TGG + chr1_2:44792087-44792106 Msa0072130:intron 30.0%
TTTAGAAGCTAGCTATTAGT+GGG + chr1_2:44792470-44792489 Msa0072130:intron 30.0%
GTATCTCATACTACTTGATT+TGG + chr1_2:44792523-44792542 Msa0072130:intron 30.0%
AACATTGAGCATTTGAATAC+AGG - chr1_2:44792825-44792844 None:intergenic 30.0%
ATTCTCTCTATTGATACACT+TGG - chr1_2:44793214-44793233 None:intergenic 30.0%
AGCAAGTAAATAATCATGAG+GGG - chr1_2:44793861-44793880 None:intergenic 30.0%
CAGCAAGTAAATAATCATGA+GGG - chr1_2:44793862-44793881 None:intergenic 30.0%
GGCATAAATTGGATAACATT+AGG - chr1_2:44793914-44793933 None:intergenic 30.0%
! AAGGAAAAGAAGGCATAAAT+TGG - chr1_2:44793925-44793944 None:intergenic 30.0%
GCTTTAGTAATATGGAATAG+AGG + chr1_2:44793965-44793984 Msa0072130:intron 30.0%
TCATAAATGGTTATCTGTGT+AGG + chr1_2:44794054-44794073 Msa0072130:intron 30.0%
CATAAATGGTTATCTGTGTA+GGG + chr1_2:44794055-44794074 Msa0072130:intron 30.0%
!! CTAACACTTATTTTCGAGAA+AGG + chr1_2:44794171-44794190 Msa0072130:intron 30.0%
TATATTGTATAAAAGCGGAG+TGG + chr1_2:44794206-44794225 Msa0072130:intron 30.0%
! TACCATTTTCCATATAATGG+AGG - chr1_2:44794431-44794450 None:intergenic 30.0%
! GACTACCATTTTCCATATAA+TGG - chr1_2:44794434-44794453 None:intergenic 30.0%
GGAAGTTCAAAACAAACTAT+AGG + chr1_2:44794548-44794567 Msa0072130:intron 30.0%
TGTTCTTACGTTTATCTAGT+TGG + chr1_2:44795011-44795030 Msa0072130:intron 30.0%
GTTCTTACGTTTATCTAGTT+GGG + chr1_2:44795012-44795031 Msa0072130:intron 30.0%
TTCTTACGTTTATCTAGTTG+GGG + chr1_2:44795013-44795032 Msa0072130:intron 30.0%
! ACAAAGCCTATACTTTGTTT+CGG + chr1_2:44795126-44795145 Msa0072130:CDS 30.0%
ATTATCACTAACCCTTCAAA+AGG - chr1_2:44795189-44795208 None:intergenic 30.0%
AAGGCTCTCAAATTTCTTTA+AGG - chr1_2:44795432-44795451 None:intergenic 30.0%
TTAAAGAAATTTGAGAGCCT+TGG + chr1_2:44795431-44795450 Msa0072130:intron 30.0%
!! AAGCTCTCTAATTTTTGGAA+TGG - chr1_2:44795462-44795481 None:intergenic 30.0%
ATTATTGGGTAACTATTCAG+GGG - chr1_2:44795503-44795522 None:intergenic 30.0%
GATTATTGGGTAACTATTCA+GGG - chr1_2:44795504-44795523 None:intergenic 30.0%
TGATTATTGGGTAACTATTC+AGG - chr1_2:44795505-44795524 None:intergenic 30.0%
AATAAATAGAGAGAGGAAAG+GGG - chr1_2:44795532-44795551 None:intergenic 30.0%
GAATAAATAGAGAGAGGAAA+GGG - chr1_2:44795533-44795552 None:intergenic 30.0%
! CTTTAGGAATAAATAGAGAG+AGG - chr1_2:44795539-44795558 None:intergenic 30.0%
CTCTCTCTATTTATTCCTAA+AGG + chr1_2:44795537-44795556 Msa0072130:intron 30.0%
TACTTCAATAAACAAGGCAT+TGG + chr1_2:44796073-44796092 Msa0072130:intron 30.0%
ACTATTAAGTTAGAAGTCTC+TGG - chr1_2:44796217-44796236 None:intergenic 30.0%
! TGACAAGAATTTCTAAAGAG+AGG - chr1_2:44796398-44796417 None:intergenic 30.0%
! GGAAAGATTTGTGTTGTTAA+AGG + chr1_2:44796672-44796691 Msa0072130:intron 30.0%
CTTGGAGTTTCCTTTAATTA+TGG + chr1_2:44796739-44796758 Msa0072130:intron 30.0%
GAAAAAGAACATGGTTGTTA+AGG + chr1_2:44796789-44796808 Msa0072130:intron 30.0%
CATGTTAAGTTAGTTACCTT+TGG + chr1_2:44796853-44796872 Msa0072130:intron 30.0%
ATATACAAAGAGAACTCCAA+AGG - chr1_2:44796872-44796891 None:intergenic 30.0%
CTAGATCACTTAATGTTGTT+GGG - chr1_2:44797070-44797089 None:intergenic 30.0%
TCTAGATCACTTAATGTTGT+TGG - chr1_2:44797071-44797090 None:intergenic 30.0%
! TCGGTCATATGTCTTTAAAA+AGG + chr1_2:44797102-44797121 Msa0072130:intron 30.0%
! CGGTCATATGTCTTTAAAAA+GGG + chr1_2:44797103-44797122 Msa0072130:intron 30.0%
GGTAATAATAGACTAACAAC+AGG + chr1_2:44797124-44797143 Msa0072130:intron 30.0%
ATAAAAGCAATTCTGATCAC+AGG - chr1_2:44797344-44797363 None:intergenic 30.0%
! GTTAAAATCATGGATTACCT+TGG - chr1_2:44797910-44797929 None:intergenic 30.0%
!! AGGTAATCCATGATTTTAAC+TGG + chr1_2:44797910-44797929 Msa0072130:intron 30.0%
! CTGTATCATTATGTGTTTTG+AGG + chr1_2:44797995-44798014 Msa0072130:CDS 30.0%
!!! ATCATTATGTGTTTTGAGGA+TGG + chr1_2:44797999-44798018 Msa0072130:CDS 30.0%
AACAATGAAAACCATTAGCT+TGG + chr1_2:44798022-44798041 Msa0072130:CDS 30.0%
CTTCTGTGATGTTATCAAAA+TGG + chr1_2:44798190-44798209 Msa0072130:intron 30.0%
ATACTATGAAAAATACGGTG+TGG + chr1_2:44798262-44798281 Msa0072130:intron 30.0%
TATAGAACAGGTCATTTAGA+TGG - chr1_2:44798399-44798418 None:intergenic 30.0%
CTGACATGTTATTATAGAAC+AGG - chr1_2:44798411-44798430 None:intergenic 30.0%
CTGTTCTATAATAACATGTC+AGG + chr1_2:44798409-44798428 Msa0072130:intron 30.0%
TAGAGTTCAACTTAAAACAG+TGG - chr1_2:44798583-44798602 None:intergenic 30.0%
CTGTTACAACTACAAATTTG+AGG - chr1_2:44798807-44798826 None:intergenic 30.0%
TTGTAACAGAATCCTTGATT+AGG + chr1_2:44798818-44798837 Msa0072130:intron 30.0%
!!! ATTTTTATTCTGGGATGGAT+TGG - chr1_2:44798861-44798880 None:intergenic 30.0%
! TGCTTTTGGATAATAAGTCT+CGG - chr1_2:44799081-44799100 None:intergenic 30.0%
! ATTAAACGCAATTCTGCTTT+TGG - chr1_2:44799095-44799114 None:intergenic 30.0%
! ACTGATGATTGTCAGATTTT+AGG + chr1_2:44799133-44799152 Msa0072130:CDS 30.0%
GAATCACATCATAATTAGCA+AGG - chr1_2:44799163-44799182 None:intergenic 30.0%
! TCTTTGTGATGGTGATAATA+TGG + chr1_2:44799244-44799263 Msa0072130:CDS 30.0%
! CTTTGTGATGGTGATAATAT+GGG + chr1_2:44799245-44799264 Msa0072130:CDS 30.0%
!!! TTTTTTTTGGTCAATACCAG+AGG - chr1_2:44799733-44799752 None:intergenic 30.0%
AAATGCCCTTTACTTTACCT+AGG - chr1_2:44787479-44787498 None:intergenic 35.0%
GGCATTTACCTTTCACAAAA+GGG + chr1_2:44787492-44787511 Msa0072130:five_prime_UTR 35.0%
ACCTTTCACAAAAGGGATTA+AGG + chr1_2:44787499-44787518 Msa0072130:five_prime_UTR 35.0%
CGTTGTTTATCAACAGAACA+GGG + chr1_2:44787522-44787541 Msa0072130:five_prime_UTR 35.0%
AGGGTTTGAATATCAGTTCT+GGG + chr1_2:44787558-44787577 Msa0072130:five_prime_UTR 35.0%
! AAACAAGAGAGTAATGGAAG+AGG + chr1_2:44787607-44787626 Msa0072130:exon 35.0%
! CGAGAATTTCTTTGAAGACA+TGG + chr1_2:44787832-44787851 Msa0072130:CDS 35.0%
TGTTCTTGAGCAATACGATT+TGG + chr1_2:44788033-44788052 Msa0072130:intron 35.0%
! AGAGTTGGTTAGGATTGATT+AGG - chr1_2:44788150-44788169 None:intergenic 35.0%
TATGAACCGAATCTCTAAGT+TGG + chr1_2:44788363-44788382 Msa0072130:intron 35.0%
ATGAACCGAATCTCTAAGTT+GGG + chr1_2:44788364-44788383 Msa0072130:intron 35.0%
ACCATTAAATGTGCAGAGAA+TGG + chr1_2:44788470-44788489 Msa0072130:intron 35.0%
TCCATTCTCTGCACATTTAA+TGG - chr1_2:44788474-44788493 None:intergenic 35.0%
TTAAATGTGCAGAGAATGGA+AGG + chr1_2:44788474-44788493 Msa0072130:intron 35.0%
TCAGCATAATATGCAAAAGG+AGG + chr1_2:44788741-44788760 Msa0072130:intron 35.0%
ATACTTGGATTCTTGAGGTT+TGG - chr1_2:44788782-44788801 None:intergenic 35.0%
AAACCTCAAGAATCCAAGTA+TGG + chr1_2:44788781-44788800 Msa0072130:intron 35.0%
AAACCATACTTGGATTCTTG+AGG - chr1_2:44788787-44788806 None:intergenic 35.0%
AACTTGGCTAAACACTTTGT+TGG + chr1_2:44788943-44788962 Msa0072130:intron 35.0%
AGAGACTTTGTGATGAATGT+TGG + chr1_2:44788969-44788988 Msa0072130:intron 35.0%
TGTGATGTTTCATACGTTGA+GGG + chr1_2:44789202-44789221 Msa0072130:intron 35.0%
CTCTTAAAAGAACAATACGC+TGG - chr1_2:44789281-44789300 None:intergenic 35.0%
CGGCATATATTATAAGCAAG+GGG + chr1_2:44789373-44789392 Msa0072130:intron 35.0%
GGCACATAATTGTAGAATAG+AGG + chr1_2:44789394-44789413 Msa0072130:intron 35.0%
GTGTTGAATTTGGTATGCTA+TGG - chr1_2:44789433-44789452 None:intergenic 35.0%
ACAGAGCGAAATTAACCTAA+AGG + chr1_2:44789493-44789512 Msa0072130:intron 35.0%
! GTAATTTTCGATCACAAAGC+AGG - chr1_2:44789551-44789570 None:intergenic 35.0%
AAATGGAAAAACACTGCCTT+AGG + chr1_2:44789666-44789685 Msa0072130:intron 35.0%
GATATAGTACTATTGCTGAG+AGG - chr1_2:44789853-44789872 None:intergenic 35.0%
CTATCAAATAGCGACTATAG+TGG - chr1_2:44789877-44789896 None:intergenic 35.0%
GACATTTGGCATACAGAAAA+TGG - chr1_2:44790081-44790100 None:intergenic 35.0%
! GTTAATTATGATGGAGACAC+TGG + chr1_2:44790174-44790193 Msa0072130:intron 35.0%
GACCACAAAACTATCCAAAT+AGG - chr1_2:44790291-44790310 None:intergenic 35.0%
TTATTTCCTACTTCCAAGTC+TGG - chr1_2:44790380-44790399 None:intergenic 35.0%
ATGACCTTCTTTCTGATACT+TGG + chr1_2:44790429-44790448 Msa0072130:intron 35.0%
TAGAAGACACCATATTTGCA+CGG - chr1_2:44790533-44790552 None:intergenic 35.0%
!!! AGGTTTTTTTTCCTTCTTCC+CGG - chr1_2:44790593-44790612 None:intergenic 35.0%
!!! TTTGTGCACGTGTCTTTTTT+AGG - chr1_2:44790613-44790632 None:intergenic 35.0%
ATAGAAATAAAGAGGCCTAG+AGG + chr1_2:44790643-44790662 Msa0072130:CDS 35.0%
!! ATTGCTTCGTTGTTTTCAGT+AGG - chr1_2:44790685-44790704 None:intergenic 35.0%
CAGTGGATAGTACAAATTGT+GGG + chr1_2:44790764-44790783 Msa0072130:CDS 35.0%
!!! TTCTTTTTCGGTCTTCCTTT+AGG - chr1_2:44790880-44790899 None:intergenic 35.0%
GAACAGTAAGAGGAACAAAT+TGG - chr1_2:44790942-44790961 None:intergenic 35.0%
GCATTCTTTCCCTTTGTATT+CGG - chr1_2:44791042-44791061 None:intergenic 35.0%
AAACTCTTGTTGCAAGAAGT+AGG + chr1_2:44791163-44791182 Msa0072130:CDS 35.0%
ATAATGGCCTACTTGTATCT+GGG - chr1_2:44791221-44791240 None:intergenic 35.0%
AATAATGGCCTACTTGTATC+TGG - chr1_2:44791222-44791241 None:intergenic 35.0%
! ATTGATTCAGTGTGAGAATG+AGG + chr1_2:44791239-44791258 Msa0072130:CDS 35.0%
! CAATGCTACATTTTGTGGAA+TGG - chr1_2:44791319-44791338 None:intergenic 35.0%
!! TCTGGAAGTGTAAGATGTTT+TGG + chr1_2:44791470-44791489 Msa0072130:intron 35.0%
!! CTGGAAGTGTAAGATGTTTT+GGG + chr1_2:44791471-44791490 Msa0072130:intron 35.0%
CCAAGAACATGAACAGAAAA+TGG - chr1_2:44791506-44791525 None:intergenic 35.0%
! CCATTTTCTGTTCATGTTCT+TGG + chr1_2:44791503-44791522 Msa0072130:intron 35.0%
ATAAAATGTGACACAGCCTA+TGG + chr1_2:44791770-44791789 Msa0072130:intron 35.0%
GCTTATCATAAAGTAAACCC+AGG + chr1_2:44791820-44791839 Msa0072130:intron 35.0%
! TCGGATCTTTGTAACTTGTA+GGG - chr1_2:44792342-44792361 None:intergenic 35.0%
!! TATTTTGGATCTGTGAGAGA+GGG - chr1_2:44792383-44792402 None:intergenic 35.0%
!!! TTATTTTGGATCTGTGAGAG+AGG - chr1_2:44792384-44792403 None:intergenic 35.0%
! AATAGCTAGCTTCTAAAGGA+GGG - chr1_2:44792467-44792486 None:intergenic 35.0%
! TAATAGCTAGCTTCTAAAGG+AGG - chr1_2:44792468-44792487 None:intergenic 35.0%
! CACTAATAGCTAGCTTCTAA+AGG - chr1_2:44792471-44792490 None:intergenic 35.0%
! CTTTAGAAGCTAGCTATTAG+TGG + chr1_2:44792469-44792488 Msa0072130:intron 35.0%
TTAGAAGCTAGCTATTAGTG+GGG + chr1_2:44792471-44792490 Msa0072130:intron 35.0%
CAAGTAGTATGAGATACTAG+TGG - chr1_2:44792520-44792539 None:intergenic 35.0%
!! TACTACTTGATTTGGTACCT+AGG + chr1_2:44792531-44792550 Msa0072130:intron 35.0%
ATACTTGTATCAATTGCAGG+TGG + chr1_2:44792721-44792740 Msa0072130:intron 35.0%
TACTTGTATCAATTGCAGGT+GGG + chr1_2:44792722-44792741 Msa0072130:intron 35.0%
! GGCTCCAATTTTATAAAACG+AGG - chr1_2:44792804-44792823 None:intergenic 35.0%
AAATGCTCAATGTTGAAACG+TGG + chr1_2:44792831-44792850 Msa0072130:CDS 35.0%
GTCCGTTATAGTTAGAATAG+AGG - chr1_2:44792877-44792896 None:intergenic 35.0%
GTTATTGACAACTTGTCTTC+TGG + chr1_2:44793696-44793715 Msa0072130:intron 35.0%
GCAAGTAAATAATCATGAGG+GGG - chr1_2:44793860-44793879 None:intergenic 35.0%
CCAGCAAGTAAATAATCATG+AGG - chr1_2:44793863-44793882 None:intergenic 35.0%
CCTCATGATTATTTACTTGC+TGG + chr1_2:44793860-44793879 Msa0072130:CDS 35.0%
CAAATTATACCGTTCCATCA+TGG - chr1_2:44793889-44793908 None:intergenic 35.0%
ACCAAAATATCAAGAAACGG+TGG + chr1_2:44794292-44794311 Msa0072130:intron 35.0%
! TCCACCGTTTCTTGATATTT+TGG - chr1_2:44794296-44794315 None:intergenic 35.0%
! CCATATAATGGAGGACAATT+CGG - chr1_2:44794422-44794441 None:intergenic 35.0%
GTCCTCCATTATATGGAAAA+TGG + chr1_2:44794426-44794445 Msa0072130:intron 35.0%
!! TCTACTAGTCTTAGATGGTT+TGG + chr1_2:44794452-44794471 Msa0072130:intron 35.0%
!! CTACTAGTCTTAGATGGTTT+GGG + chr1_2:44794453-44794472 Msa0072130:intron 35.0%
ATAGGCCAATCATTTAAGAG+AGG + chr1_2:44794566-44794585 Msa0072130:intron 35.0%
CCAAACCTCTCTTAAATGAT+TGG - chr1_2:44794574-44794593 None:intergenic 35.0%
CCAATCATTTAAGAGAGGTT+TGG + chr1_2:44794571-44794590 Msa0072130:intron 35.0%
CAATACCTGACAGCATATTA+TGG + chr1_2:44794618-44794637 Msa0072130:intron 35.0%
TTTATATGTAGGTTGCTCTG+TGG + chr1_2:44794932-44794951 Msa0072130:intron 35.0%
GATAAACGTAAGAACACGTT+GGG - chr1_2:44795007-44795026 None:intergenic 35.0%
AGATAAACGTAAGAACACGT+TGG - chr1_2:44795008-44795027 None:intergenic 35.0%
CAGATAAACAACTGAGTCAA+TGG - chr1_2:44795101-44795120 None:intergenic 35.0%
TTCCTATTAGAACAGTTGCA+TGG + chr1_2:44795160-44795179 Msa0072130:CDS 35.0%
TCCTATTAGAACAGTTGCAT+GGG + chr1_2:44795161-44795180 Msa0072130:CDS 35.0%
! GATCATTCACATCAGTCTTT+TGG - chr1_2:44795225-44795244 None:intergenic 35.0%
GAAAGGGGAAAGTGATTATT+GGG - chr1_2:44795517-44795536 None:intergenic 35.0%
GGAATAAATAGAGAGAGGAA+AGG - chr1_2:44795534-44795553 None:intergenic 35.0%
TGGAGATTGACTATTATGCT+AGG + chr1_2:44795906-44795925 Msa0072130:intron 35.0%
TCTAACTTAATAGTAACCGC+AGG + chr1_2:44796223-44796242 Msa0072130:CDS 35.0%
AGGAAAAAAAAACTCACCGT+AGG - chr1_2:44796273-44796292 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_2:44796354-44796373 Msa0072130:intron 35.0%
AGAATCATATCTATCCAGTG+CGG + chr1_2:44796418-44796437 Msa0072130:intron 35.0%
AAGAACATGGTTGTTAAGGA+TGG + chr1_2:44796793-44796812 Msa0072130:intron 35.0%
GATGGCCCTTCAAAAAAATA+TGG + chr1_2:44796811-44796830 Msa0072130:intron 35.0%
!! AACAAGTTGGTTGTTAGCAA+GGG - chr1_2:44796935-44796954 None:intergenic 35.0%
! TTGCTAACAACCAACTTGTT+GGG + chr1_2:44796935-44796954 Msa0072130:intron 35.0%
TCACTTAATGTTGTTGGGTT+GGG - chr1_2:44797065-44797084 None:intergenic 35.0%
ATCACTTAATGTTGTTGGGT+TGG - chr1_2:44797066-44797085 None:intergenic 35.0%
ACAACAGGACTAATAATAGC+AGG + chr1_2:44797139-44797158 Msa0072130:intron 35.0%
!!! TTATTTTTTGTCTGTGCTGC+TGG + chr1_2:44797272-44797291 Msa0072130:intron 35.0%
TGCTAAGGAAAAGTAGTAGT+AGG + chr1_2:44797386-44797405 Msa0072130:intron 35.0%
GAACTGAGAGTAAATTCAAG+AGG - chr1_2:44797600-44797619 None:intergenic 35.0%
AACAAGTTTAACAGCCTCTA+AGG - chr1_2:44797777-44797796 None:intergenic 35.0%
! GCTGTTAAACTTGTTTCCAA+TGG + chr1_2:44797782-44797801 Msa0072130:intron 35.0%
CAGACTGTAAATGATTCTCT+GGG - chr1_2:44797872-44797891 None:intergenic 35.0%
GAATCATTTACAGTCTGGAT+TGG + chr1_2:44797875-44797894 Msa0072130:CDS 35.0%
CGTATTCATCTTATGCCATT+TGG + chr1_2:44798120-44798139 Msa0072130:CDS 35.0%
CTATAATAACATGTCAGGCA+TGG + chr1_2:44798414-44798433 Msa0072130:intron 35.0%
ATGCTACTCTTACCTGAAAA+CGG - chr1_2:44798471-44798490 None:intergenic 35.0%
! AGGTAAGAGTAGCATTTTGT+TGG + chr1_2:44798476-44798495 Msa0072130:intron 35.0%
CTTAAAACAGTGGTATGCAA+GGG - chr1_2:44798573-44798592 None:intergenic 35.0%
ACTTAAAACAGTGGTATGCA+AGG - chr1_2:44798574-44798593 None:intergenic 35.0%
!!! TCTTTTAAAACTGTGAGACG+TGG + chr1_2:44798720-44798739 Msa0072130:intron 35.0%
TGAAGCAACTAAACGAAAAC+TGG - chr1_2:44798778-44798797 None:intergenic 35.0%
TCAGCTAACAACTAAATCAG+TGG + chr1_2:44798910-44798929 Msa0072130:intron 35.0%
ACTGATCCACATAGAAAGAA+TGG - chr1_2:44798962-44798981 None:intergenic 35.0%
AGCTGCAACAAATTGAAGAT+TGG - chr1_2:44799225-44799244 None:intergenic 35.0%
! TGATGGTGATAATATGGGTT+TGG + chr1_2:44799250-44799269 Msa0072130:CDS 35.0%
ATAATGAAAAGCCGGATTCT+GGG + chr1_2:44799411-44799430 Msa0072130:CDS 35.0%
AGTGAGATGGAACATTAACA+AGG + chr1_2:44799478-44799497 Msa0072130:CDS 35.0%
GTGAGATGGAACATTAACAA+GGG + chr1_2:44799479-44799498 Msa0072130:CDS 35.0%
AAAACGCTATCATCTCTTCA+AGG - chr1_2:44799591-44799610 None:intergenic 35.0%
CTCAAGACCTAAAATTTACG+TGG - chr1_2:44799616-44799635 None:intergenic 35.0%
TGTCCACCTAGGTAAAGTAA+AGG + chr1_2:44787470-44787489 Msa0072130:five_prime_UTR 40.0%
GTCCACCTAGGTAAAGTAAA+GGG + chr1_2:44787471-44787490 Msa0072130:five_prime_UTR 40.0%
GGGCATTTACCTTTCACAAA+AGG + chr1_2:44787491-44787510 Msa0072130:five_prime_UTR 40.0%
! GCCTTAATCCCTTTTGTGAA+AGG - chr1_2:44787503-44787522 None:intergenic 40.0%
GCGTTGTTTATCAACAGAAC+AGG + chr1_2:44787521-44787540 Msa0072130:five_prime_UTR 40.0%
CAGAACTGATATTCAAACCC+TGG - chr1_2:44787559-44787578 None:intergenic 40.0%
CAGGGTTTGAATATCAGTTC+TGG + chr1_2:44787557-44787576 Msa0072130:five_prime_UTR 40.0%
! ACTCTCTTGTTTGCAATTGC+AGG - chr1_2:44787599-44787618 None:intergenic 40.0%
TTCTTCTTCCTCACAGAGTT+TGG - chr1_2:44787867-44787886 None:intergenic 40.0%
ATGTATCAGCTATGATGCTC+TGG + chr1_2:44788073-44788092 Msa0072130:intron 40.0%
CGATAGTGATACAAACTCTG+AGG - chr1_2:44788127-44788146 None:intergenic 40.0%
TCCTAACCAACTCTTTGAGT+TGG + chr1_2:44788156-44788175 Msa0072130:intron 40.0%
! ACCAACTCAAAGAGTTGGTT+AGG - chr1_2:44788160-44788179 None:intergenic 40.0%
CGAAACCCAACTTAGAGATT+CGG - chr1_2:44788372-44788391 None:intergenic 40.0%
GACTTTGTGATGAATGTTGG+AGG + chr1_2:44788972-44788991 Msa0072130:CDS 40.0%
TGAATGTTGGAGGTTCTGTA+TGG + chr1_2:44788982-44789001 Msa0072130:CDS 40.0%
GAATGTTGGAGGTTCTGTAT+GGG + chr1_2:44788983-44789002 Msa0072130:CDS 40.0%
GTTCTGTATGGGCATTAGAT+TGG + chr1_2:44788994-44789013 Msa0072130:CDS 40.0%
GTGTGATGTTTCATACGTTG+AGG + chr1_2:44789201-44789220 Msa0072130:intron 40.0%
!! TGAAGTTTGATGGTGAGGTA+AGG + chr1_2:44789235-44789254 Msa0072130:intron 40.0%
!! GAAGTTTGATGGTGAGGTAA+GGG + chr1_2:44789236-44789255 Msa0072130:intron 40.0%
!! AAGTTTGATGGTGAGGTAAG+GGG + chr1_2:44789237-44789256 Msa0072130:intron 40.0%
GCTACTTCTACTCACACATT+CGG - chr1_2:44789337-44789356 None:intergenic 40.0%
ATACATGTCCAAACCACCTA+AGG - chr1_2:44789685-44789704 None:intergenic 40.0%
! TGGTTTGGACATGTATTGAG+AGG + chr1_2:44789689-44789708 Msa0072130:intron 40.0%
GTGTTGTCAATCTCAGATAG+TGG + chr1_2:44789815-44789834 Msa0072130:intron 40.0%
! CACTATAACGTGGTGGAATT+TGG - chr1_2:44789943-44789962 None:intergenic 40.0%
CAAATTCCACCACGTTATAG+TGG + chr1_2:44789941-44789960 Msa0072130:intron 40.0%
GATGCTATACCACTATAACG+TGG - chr1_2:44789953-44789972 None:intergenic 40.0%
AAGGAATTACCCACATCACA+GGG - chr1_2:44789994-44790013 None:intergenic 40.0%
AAAGGAATTACCCACATCAC+AGG - chr1_2:44789995-44790014 None:intergenic 40.0%
TTGGCATACAGAAAATGGTG+AGG - chr1_2:44790076-44790095 None:intergenic 40.0%
! CATGGTGTCAACTAGCTATT+AGG - chr1_2:44790121-44790140 None:intergenic 40.0%
CACCATGTTAAATTACCACC+TGG + chr1_2:44790134-44790153 Msa0072130:intron 40.0%
AGCCAGGTGGTAATTTAACA+TGG - chr1_2:44790139-44790158 None:intergenic 40.0%
CAAAAGGATTTAGGTAAGCC+AGG - chr1_2:44790155-44790174 None:intergenic 40.0%
ACTTACCTTTGTTCCAGACT+TGG + chr1_2:44790364-44790383 Msa0072130:intron 40.0%
! TACTTCCAAGTCTGGAACAA+AGG - chr1_2:44790372-44790391 None:intergenic 40.0%
TTTGTTCCAGACTTGGAAGT+AGG + chr1_2:44790371-44790390 Msa0072130:intron 40.0%
TTGTGATAAGATGAACCAGG+CGG - chr1_2:44790481-44790500 None:intergenic 40.0%
!! GAAGAAGTATCATATCTCCC+CGG + chr1_2:44790571-44790590 Msa0072130:CDS 40.0%
!! AAGAAGTATCATATCTCCCC+GGG + chr1_2:44790572-44790591 Msa0072130:CDS 40.0%
!!! GTTTTTTTTCCTTCTTCCCG+GGG - chr1_2:44790591-44790610 None:intergenic 40.0%
!!! GGTTTTTTTTCCTTCTTCCC+GGG - chr1_2:44790592-44790611 None:intergenic 40.0%
AAATAAAGAGGCCTAGAGGA+AGG + chr1_2:44790647-44790666 Msa0072130:CDS 40.0%
GAATCCAACTGTAATAGCAG+TGG + chr1_2:44790747-44790766 Msa0072130:CDS 40.0%
CTATCCACTGCTATTACAGT+TGG - chr1_2:44790754-44790773 None:intergenic 40.0%
GCAGTGGATAGTACAAATTG+TGG + chr1_2:44790763-44790782 Msa0072130:CDS 40.0%
ACTACCAGATGCTATGTACT+TGG - chr1_2:44790791-44790810 None:intergenic 40.0%
! CATCTGGTAGTGTCTCAAAT+GGG + chr1_2:44790800-44790819 Msa0072130:CDS 40.0%
TCTGGAAGTTGAACAGTAAG+AGG - chr1_2:44790952-44790971 None:intergenic 40.0%
ATTTCTCCAGATGTAGTTCC+TGG + chr1_2:44790985-44791004 Msa0072130:CDS 40.0%
AAAGCTGCTGCGAATACAAA+GGG + chr1_2:44791066-44791085 Msa0072130:CDS 40.0%
AAAGCTGCTCCGAATACAAA+GGG + chr1_2:44791102-44791121 Msa0072130:CDS 40.0%
TCTTGTTGCAAGAAGTAGGT+TGG + chr1_2:44791167-44791186 Msa0072130:CDS 40.0%
ATGCTTGAGGTTCCAATACA+GGG - chr1_2:44791287-44791306 None:intergenic 40.0%
! CTAGGCAATGCTACATTTTG+TGG - chr1_2:44791324-44791343 None:intergenic 40.0%
! ATGCCTAGCTCATAATGGAA+AGG + chr1_2:44791353-44791372 Msa0072130:CDS 40.0%
! TCATAATGGAAAGGTGGCAT+GGG + chr1_2:44791362-44791381 Msa0072130:CDS 40.0%
GAGGAATCAAGATTGCTAAG+AGG - chr1_2:44791402-44791421 None:intergenic 40.0%
AGACAATTAGGGTTGACAGT+TGG + chr1_2:44791737-44791756 Msa0072130:intron 40.0%
GTGTATTCCAATTGTTGTCC+AGG + chr1_2:44791943-44791962 Msa0072130:intron 40.0%
ATAGGTACCTGGACAACAAT+TGG - chr1_2:44791953-44791972 None:intergenic 40.0%
TTACTTACAGCATAGGTACC+TGG - chr1_2:44791964-44791983 None:intergenic 40.0%
GACCATTGCAACCATTTCAA+CGG - chr1_2:44792101-44792120 None:intergenic 40.0%
! CAAACAGAATTTTGTGCAGC+AGG - chr1_2:44792244-44792263 None:intergenic 40.0%
ATGTTTCCAGTAACCCACAA+TGG + chr1_2:44792272-44792291 Msa0072130:intron 40.0%
! TCATTGCAATCTGTCGTTTG+AGG - chr1_2:44792300-44792319 None:intergenic 40.0%
! GTCGGATCTTTGTAACTTGT+AGG - chr1_2:44792343-44792362 None:intergenic 40.0%
GGTATCTTTCACTGACAAGT+CGG - chr1_2:44792361-44792380 None:intergenic 40.0%
! ATTTTGGATCTGTGAGAGAG+GGG - chr1_2:44792382-44792401 None:intergenic 40.0%
TAGAAGCTAGCTATTAGTGG+GGG + chr1_2:44792472-44792491 Msa0072130:intron 40.0%
ATCAATGGCAGTGCTATGAT+GGG - chr1_2:44792577-44792596 None:intergenic 40.0%
TATCAATGGCAGTGCTATGA+TGG - chr1_2:44792578-44792597 None:intergenic 40.0%
!! ATTTTGAGGAGCTTATGACG+TGG + chr1_2:44792675-44792694 Msa0072130:intron 40.0%
! ATCCATTACGGGTCTTTTGT+AGG + chr1_2:44792979-44792998 Msa0072130:intron 40.0%
TACCTACAAAAGACCCGTAA+TGG - chr1_2:44792984-44793003 None:intergenic 40.0%
! CAATGCATTGGTGGAATATG+CGG - chr1_2:44793071-44793090 None:intergenic 40.0%
TATTCCACCAATGCATTGAG+AGG + chr1_2:44793073-44793092 Msa0072130:intron 40.0%
AAACAGTGGACCTGCATAAT+AGG + chr1_2:44793272-44793291 Msa0072130:intron 40.0%
AACAGTGGACCTGCATAATA+GGG + chr1_2:44793273-44793292 Msa0072130:intron 40.0%
CATAACAAGCCCTATTATGC+AGG - chr1_2:44793285-44793304 None:intergenic 40.0%
!! CTGCATAATAGGGCTTGTTA+TGG + chr1_2:44793283-44793302 Msa0072130:intron 40.0%
!! TAATAGGGCTTGTTATGGCT+TGG + chr1_2:44793288-44793307 Msa0072130:intron 40.0%
TCAATTCAGTAAGGCAGAGA+CGG - chr1_2:44793599-44793618 None:intergenic 40.0%
!! TTAACATTAATGGTGGGCAG+AGG - chr1_2:44793638-44793657 None:intergenic 40.0%
ATTGACAACATGATACCCAC+TGG - chr1_2:44794084-44794103 None:intergenic 40.0%
AGTGGGTATCATGTTGTCAA+TGG + chr1_2:44794083-44794102 Msa0072130:intron 40.0%
GTGGGTATCATGTTGTCAAT+GGG + chr1_2:44794084-44794103 Msa0072130:intron 40.0%
! ATGTTGTCAATGGGTTCTGT+AGG + chr1_2:44794093-44794112 Msa0072130:intron 40.0%
! TGTTGTCAATGGGTTCTGTA+GGG + chr1_2:44794094-44794113 Msa0072130:intron 40.0%
TATAAAAGCGGAGTGGTCTA+AGG + chr1_2:44794213-44794232 Msa0072130:intron 40.0%
ATAAAAGCGGAGTGGTCTAA+GGG + chr1_2:44794214-44794233 Msa0072130:intron 40.0%
! ATAGGGTGAGGTGCTTTAAA+AGG + chr1_2:44794241-44794260 Msa0072130:intron 40.0%
!! AGGTGCTTTAAAAGGTGATG+AGG + chr1_2:44794249-44794268 Msa0072130:intron 40.0%
!! GGTGCTTTAAAAGGTGATGA+GGG + chr1_2:44794250-44794269 Msa0072130:intron 40.0%
CCGAATTGTCCTCCATTATA+TGG + chr1_2:44794419-44794438 Msa0072130:intron 40.0%
!! GGTAGTCTACTAGTCTTAGA+TGG + chr1_2:44794447-44794466 Msa0072130:intron 40.0%
CTCCTACTAATGCTTCTAGT+GGG - chr1_2:44794493-44794512 None:intergenic 40.0%
TCTCCTACTAATGCTTCTAG+TGG - chr1_2:44794494-44794513 None:intergenic 40.0%
!! ACTAGAAGCATTAGTAGGAG+AGG + chr1_2:44794493-44794512 Msa0072130:intron 40.0%
TGACCTCATGTAGTTGGAAA+AGG + chr1_2:44794661-44794680 Msa0072130:intron 40.0%
! AAGCCTTTTCCAACTACATG+AGG - chr1_2:44794667-44794686 None:intergenic 40.0%
GTTGGAAAAGGCTTAGTTGT+TGG + chr1_2:44794673-44794692 Msa0072130:intron 40.0%
GAAAAGGCTTAGTTGTTGGT+TGG + chr1_2:44794677-44794696 Msa0072130:intron 40.0%
TTATCTAGTTGGGGTTGCTA+AGG + chr1_2:44795022-44795041 Msa0072130:intron 40.0%
! AAGCCTATACTTTGTTTCGG+TGG + chr1_2:44795129-44795148 Msa0072130:CDS 40.0%
! AGCCTATACTTTGTTTCGGT+GGG + chr1_2:44795130-44795149 Msa0072130:CDS 40.0%
!!! TTTTTGGAATGGAGAGACCA+AGG - chr1_2:44795451-44795470 None:intergenic 40.0%
TAACTATTCAGGGGTTATGG+GGG - chr1_2:44795494-44795513 None:intergenic 40.0%
GTAACTATTCAGGGGTTATG+GGG - chr1_2:44795495-44795514 None:intergenic 40.0%
GGTAACTATTCAGGGGTTAT+GGG - chr1_2:44795496-44795515 None:intergenic 40.0%
GGAAAGGGGAAAGTGATTAT+TGG - chr1_2:44795518-44795537 None:intergenic 40.0%
! CAGCTATGTTGTTTGCCTTT+AGG - chr1_2:44795555-44795574 None:intergenic 40.0%
CGTTCCCTCATCAAATTCAT+TGG + chr1_2:44795767-44795786 Msa0072130:intron 40.0%
GCATCATTTGTGTTCAGACA+TGG + chr1_2:44795990-44796009 Msa0072130:intron 40.0%
AAAGGTAAGAGGATCGTCAA+AGG - chr1_2:44796148-44796167 None:intergenic 40.0%
! ACATGAAGGCCTCAAGTTTT+GGG + chr1_2:44796246-44796265 Msa0072130:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_2:44796356-44796375 None:intergenic 40.0%
GAATCATATCTATCCAGTGC+GGG + chr1_2:44796419-44796438 Msa0072130:intron 40.0%
! GGTTGTTAGCAAGGGTTTTT+GGG - chr1_2:44796927-44796946 None:intergenic 40.0%
! TGGTTGTTAGCAAGGGTTTT+TGG - chr1_2:44796928-44796947 None:intergenic 40.0%
!! CAACAAGTTGGTTGTTAGCA+AGG - chr1_2:44796936-44796955 None:intergenic 40.0%
CTTGCTAACAACCAACTTGT+TGG + chr1_2:44796934-44796953 Msa0072130:intron 40.0%
CTGAATGTAGATCCAGAATG+TGG + chr1_2:44796993-44797012 Msa0072130:intron 40.0%
TTGCCATCTCTTCATTCACT+TGG + chr1_2:44797026-44797045 Msa0072130:intron 40.0%
GTTCCAAGTGAATGAAGAGA+TGG - chr1_2:44797032-44797051 None:intergenic 40.0%
! CTCTGAGTTCTGACAACATT+TGG + chr1_2:44797174-44797193 Msa0072130:intron 40.0%
AAGTCAAGTTTACCAGCTCA+AGG - chr1_2:44797532-44797551 None:intergenic 40.0%
ATTTGTACCTTCAGCCTTAG+AGG + chr1_2:44797760-44797779 Msa0072130:intron 40.0%
! TCCAATGGTTTGCATCATGA+TGG + chr1_2:44797797-44797816 Msa0072130:intron 40.0%
TCCATCATGATGCAAACCAT+TGG - chr1_2:44797801-44797820 None:intergenic 40.0%
! AAATGATTCTCTGGGAAGGT+TGG - chr1_2:44797864-44797883 None:intergenic 40.0%
! CTGTAAATGATTCTCTGGGA+AGG - chr1_2:44797868-44797887 None:intergenic 40.0%
CCAGACTGTAAATGATTCTC+TGG - chr1_2:44797873-44797892 None:intergenic 40.0%
CCAGAGAATCATTTACAGTC+TGG + chr1_2:44797870-44797889 Msa0072130:CDS 40.0%
CTTTCCAGTGTATATCGTTC+CGG - chr1_2:44798075-44798094 None:intergenic 40.0%
ACACTGGAAAGAAACAACCT+TGG + chr1_2:44798084-44798103 Msa0072130:CDS 40.0%
AAGAAACAACCTTGGTTGCA+TGG + chr1_2:44798092-44798111 Msa0072130:CDS 40.0%
TGACACTTGAACACTCCAAA+TGG - chr1_2:44798138-44798157 None:intergenic 40.0%
CCGAAAACAGTACCTGTTAT+CGG - chr1_2:44798161-44798180 None:intergenic 40.0%
!! CCGATAACAGGTACTGTTTT+CGG + chr1_2:44798158-44798177 Msa0072130:CDS 40.0%
TGCCTTGGTATGAATTTGAG+AGG + chr1_2:44798749-44798768 Msa0072130:intron 40.0%
GTCCTCTCAAATTCATACCA+AGG - chr1_2:44798754-44798773 None:intergenic 40.0%
!! TTTATTCTGGGATGGATTGG+TGG - chr1_2:44798858-44798877 None:intergenic 40.0%
CGACTTCCATTCTTTCTATG+TGG + chr1_2:44798953-44798972 Msa0072130:CDS 40.0%
CTCTTTCTTGCAGCTTCAAT+GGG - chr1_2:44799039-44799058 None:intergenic 40.0%
TTTGTTGCAGCTCTTTGTGA+TGG + chr1_2:44799233-44799252 Msa0072130:intron 40.0%
!! ACAGCTCAGTTTTGGTCTTT+TGG - chr1_2:44799315-44799334 None:intergenic 40.0%
! TTTCTGCTACAGCTCAGTTT+TGG - chr1_2:44799323-44799342 None:intergenic 40.0%
! GGCTTTTCATTATCAACTCC+GGG - chr1_2:44799404-44799423 None:intergenic 40.0%
! CGGCTTTTCATTATCAACTC+CGG - chr1_2:44799405-44799424 None:intergenic 40.0%
!! CGGAGTTGATAATGAAAAGC+CGG + chr1_2:44799403-44799422 Msa0072130:CDS 40.0%
GATAATGAAAAGCCGGATTC+TGG + chr1_2:44799410-44799429 Msa0072130:CDS 40.0%
ATCTTAGGAGGAAAGACTTC+GGG - chr1_2:44799443-44799462 None:intergenic 40.0%
CATCTTAGGAGGAAAGACTT+CGG - chr1_2:44799444-44799463 None:intergenic 40.0%
TTATGCAATGCTGCCATCTT+AGG - chr1_2:44799458-44799477 None:intergenic 40.0%
CAGCATTGCATAAAGTGAGA+TGG + chr1_2:44799465-44799484 Msa0072130:CDS 40.0%
TTAACAAGGGTAGTGAGAGA+TGG + chr1_2:44799492-44799511 Msa0072130:CDS 40.0%
!! TAATGGACTTGTACGTTGTC+AGG + chr1_2:44799532-44799551 Msa0072130:CDS 40.0%
TGCCCTTTACTTTACCTAGG+TGG - chr1_2:44787476-44787495 None:intergenic 45.0%
!!! AACAGGGTTTTAGCTTGTCC+AGG + chr1_2:44787538-44787557 Msa0072130:five_prime_UTR 45.0%
!!! ACAGGGTTTTAGCTTGTCCA+GGG + chr1_2:44787539-44787558 Msa0072130:five_prime_UTR 45.0%
TGCTGATGATTCTGCTACAG+CGG + chr1_2:44787736-44787755 Msa0072130:CDS 45.0%
TTCCTCACAGAGTTTGGCAA+TGG - chr1_2:44787861-44787880 None:intergenic 45.0%
! AGGCAGTGCTAGTCTATGTA+AGG + chr1_2:44788184-44788203 Msa0072130:intron 45.0%
TTGAAGAGGGAAGGGAAAGT+TGG + chr1_2:44788304-44788323 Msa0072130:intron 45.0%
ACAGTGGCAGATGAAAACTG+AGG - chr1_2:44788595-44788614 None:intergenic 45.0%
TTCATCTGCCACTGTTCCTA+AGG + chr1_2:44788600-44788619 Msa0072130:CDS 45.0%
GACTTGTACCTTAGGAACAG+TGG - chr1_2:44788611-44788630 None:intergenic 45.0%
ATGCAAAAGGAGGAGCAACT+TGG + chr1_2:44788751-44788770 Msa0072130:CDS 45.0%
TGCAAAAGGAGGAGCAACTT+GGG + chr1_2:44788752-44788771 Msa0072130:CDS 45.0%
! ATTGGTGTCCTAGGATGCAT+GGG + chr1_2:44789012-44789031 Msa0072130:CDS 45.0%
! GGTAAGGGGCACATAGTATA+TGG + chr1_2:44789251-44789270 Msa0072130:intron 45.0%
CTCACCCACTTGAATCCTTT+AGG - chr1_2:44789511-44789530 None:intergenic 45.0%
TTCAAGTGGGTGAGATGCAA+AGG + chr1_2:44789517-44789536 Msa0072130:intron 45.0%
TCAAGTGGGTGAGATGCAAA+GGG + chr1_2:44789518-44789537 Msa0072130:intron 45.0%
TGGAAAAACACTGCCTTAGG+TGG + chr1_2:44789669-44789688 Msa0072130:intron 45.0%
AAACACTGCCTTAGGTGGTT+TGG + chr1_2:44789674-44789693 Msa0072130:intron 45.0%
AGTATACCGGGGAACAATTG+CGG + chr1_2:44789912-44789931 Msa0072130:intron 45.0%
GCTATACCACTATAACGTGG+TGG - chr1_2:44789950-44789969 None:intergenic 45.0%
TGCTATTATCCCCTGTGATG+TGG + chr1_2:44789981-44790000 Msa0072130:intron 45.0%
GCTATTATCCCCTGTGATGT+GGG + chr1_2:44789982-44790001 Msa0072130:intron 45.0%
AGGAATTACCCACATCACAG+GGG - chr1_2:44789993-44790012 None:intergenic 45.0%
ATGCCAAATGTCAGATGCCA+TGG + chr1_2:44790089-44790108 Msa0072130:intron 45.0%
AGTCCATGGCATCTGACATT+TGG - chr1_2:44790095-44790114 None:intergenic 45.0%
AATGTCAGATGCCATGGACT+CGG + chr1_2:44790095-44790114 Msa0072130:intron 45.0%
AAGGATTTAGGTAAGCCAGG+TGG - chr1_2:44790152-44790171 None:intergenic 45.0%
AAAATGGGTGCCTCACTTAC+TGG + chr1_2:44790499-44790518 Msa0072130:CDS 45.0%
TTCTTTCTAGGCCTTCCTCT+AGG - chr1_2:44790661-44790680 None:intergenic 45.0%
! GCATCTGGTAGTGTCTCAAA+TGG + chr1_2:44790799-44790818 Msa0072130:CDS 45.0%
TGATGTTCATCAGAACTGCC+AGG - chr1_2:44791006-44791025 None:intergenic 45.0%
TGTATTCGCAGCAGCTTTCT+TGG - chr1_2:44791064-44791083 None:intergenic 45.0%
GAAAGCTGCTGCGAATACAA+AGG + chr1_2:44791065-44791084 Msa0072130:CDS 45.0%
GAAAGCTGCTCCGAATACAA+AGG + chr1_2:44791101-44791120 Msa0072130:CDS 45.0%
GTATGCAGAAGCAGCTTTCT+TGG - chr1_2:44791136-44791155 None:intergenic 45.0%
GTTGTAGCCCAGATACAAGT+AGG + chr1_2:44791211-44791230 Msa0072130:CDS 45.0%
GAGGCAAATCATCAACCACA+TGG + chr1_2:44791258-44791277 Msa0072130:CDS 45.0%
GATGCTTGAGGTTCCAATAC+AGG - chr1_2:44791288-44791307 None:intergenic 45.0%
ATGGGACAAGTAGATGCTTG+AGG - chr1_2:44791300-44791319 None:intergenic 45.0%
GTGTCATGCCTAGCTCATAA+TGG + chr1_2:44791348-44791367 Msa0072130:CDS 45.0%
CCACCTTTCCATTATGAGCT+AGG - chr1_2:44791359-44791378 None:intergenic 45.0%
! CCTAGCTCATAATGGAAAGG+TGG + chr1_2:44791356-44791375 Msa0072130:CDS 45.0%
! CTCATAATGGAAAGGTGGCA+TGG + chr1_2:44791361-44791380 Msa0072130:CDS 45.0%
!! TTCCTCATGCAAGCATCGAA+TGG + chr1_2:44791416-44791435 Msa0072130:CDS 45.0%
!! TCCTCATGCAAGCATCGAAT+GGG + chr1_2:44791417-44791436 Msa0072130:CDS 45.0%
! GGCTATCTTGCTGTCTTGTT+GGG + chr1_2:44791438-44791457 Msa0072130:CDS 45.0%
TGCCGTTGAAATGGTTGCAA+TGG + chr1_2:44792096-44792115 Msa0072130:intron 45.0%
! GTCGTTTGAGGTACCATTGT+GGG - chr1_2:44792288-44792307 None:intergenic 45.0%
! TGTCGTTTGAGGTACCATTG+TGG - chr1_2:44792289-44792308 None:intergenic 45.0%
ATGGGGACTTGGAGATTATG+GGG - chr1_2:44792559-44792578 None:intergenic 45.0%
GATGGGGACTTGGAGATTAT+GGG - chr1_2:44792560-44792579 None:intergenic 45.0%
TGATGGGGACTTGGAGATTA+TGG - chr1_2:44792561-44792580 None:intergenic 45.0%
TCAATGGCAGTGCTATGATG+GGG - chr1_2:44792576-44792595 None:intergenic 45.0%
TTGTATCAATTGCAGGTGGG+AGG + chr1_2:44792725-44792744 Msa0072130:intron 45.0%
TAAACTGCTCTCAGTGCATG+AGG - chr1_2:44792759-44792778 None:intergenic 45.0%
GAGAGCAGTTTATACGCAGA+AGG + chr1_2:44792767-44792786 Msa0072130:CDS 45.0%
AGCAGTTTATACGCAGAAGG+AGG + chr1_2:44792770-44792789 Msa0072130:CDS 45.0%
GCAGTTTATACGCAGAAGGA+GGG + chr1_2:44792771-44792790 Msa0072130:CDS 45.0%
! CCATAGTGGGGTTAAGGAAA+GGG + chr1_2:44792952-44792971 Msa0072130:intron 45.0%
GGAAAGGGTTGGATCCATTA+CGG + chr1_2:44792967-44792986 Msa0072130:intron 45.0%
GAAAGGGTTGGATCCATTAC+GGG + chr1_2:44792968-44792987 Msa0072130:intron 45.0%
GAAGGAACCTCTCAATGCAT+TGG - chr1_2:44793083-44793102 None:intergenic 45.0%
TGGAATAGAGGAGCAACACT+AGG + chr1_2:44793977-44793996 Msa0072130:intron 45.0%
AGTGGTCTAAGGGAGCTATA+GGG + chr1_2:44794224-44794243 Msa0072130:intron 45.0%
GTGATGAGGGAAAAACGTCA+TGG + chr1_2:44794263-44794282 Msa0072130:intron 45.0%
! TTAGATGGTTTGGGCATGTG+AGG + chr1_2:44794462-44794481 Msa0072130:intron 45.0%
!! AGCCCACTAGAAGCATTAGT+AGG + chr1_2:44794488-44794507 Msa0072130:intron 45.0%
AGTAGGAGAGGTTGACTAGA+TGG + chr1_2:44794505-44794524 Msa0072130:intron 45.0%
GTAGGAGAGGTTGACTAGAT+GGG + chr1_2:44794506-44794525 Msa0072130:intron 45.0%
GGAGACAGCTTAAGAGACAA+TGG + chr1_2:44794527-44794546 Msa0072130:intron 45.0%
TGACGCCATAATATGCTGTC+AGG - chr1_2:44794626-44794645 None:intergenic 45.0%
ACTACATGAGGTCAGCTACA+TGG - chr1_2:44794655-44794674 None:intergenic 45.0%
TGTAGCTGACCTCATGTAGT+TGG + chr1_2:44794655-44794674 Msa0072130:intron 45.0%
TAGTTGGGGTTGCTAAGGAA+GGG + chr1_2:44795027-44795046 Msa0072130:intron 45.0%
! GCCTATACTTTGTTTCGGTG+GGG + chr1_2:44795131-44795150 Msa0072130:CDS 45.0%
TCCCCACCGAAACAAAGTAT+AGG - chr1_2:44795135-44795154 None:intergenic 45.0%
GCCCATGCAACTGTTCTAAT+AGG - chr1_2:44795165-44795184 None:intergenic 45.0%
! TTGCATGGGCTCCTTTTGAA+GGG + chr1_2:44795175-44795194 Msa0072130:CDS 45.0%
!! CATCAGTCTTTTGGCTGAGA+AGG - chr1_2:44795216-44795235 None:intergenic 45.0%
AACTATTCAGGGGTTATGGG+GGG - chr1_2:44795493-44795512 None:intergenic 45.0%
GGGTAACTATTCAGGGGTTA+TGG - chr1_2:44795497-44795516 None:intergenic 45.0%
! GTGTTCAGACATGGTTTGCA+AGG + chr1_2:44795999-44796018 Msa0072130:intron 45.0%
ATAGTAACCGCAGGACATGA+AGG + chr1_2:44796232-44796251 Msa0072130:CDS 45.0%
! GACATGAAGGCCTCAAGTTT+TGG + chr1_2:44796245-44796264 Msa0072130:CDS 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_2:44796366-44796385 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_2:44796363-44796382 Msa0072130:intron 45.0%
!! CTAACAACCAACTTGTTGGG+TGG + chr1_2:44796938-44796957 Msa0072130:intron 45.0%
! GCACAGCATACCAATTTTGC+TGG - chr1_2:44796965-44796984 None:intergenic 45.0%
TGAAGAGATGGCAAGAGTGA+GGG - chr1_2:44797020-44797039 None:intergenic 45.0%
ATGAAGAGATGGCAAGAGTG+AGG - chr1_2:44797021-44797040 None:intergenic 45.0%
!!! TGTTGGGTTGGGTTTTTAGC+TGG - chr1_2:44797054-44797073 None:intergenic 45.0%
! TGTCAGAACTCAGAGCATTC+AGG - chr1_2:44797169-44797188 None:intergenic 45.0%
GTTTACCAGCTCAAGGTTCA+TGG - chr1_2:44797525-44797544 None:intergenic 45.0%
AGCATTGCGAATGAGTCAAC+TGG + chr1_2:44797638-44797657 Msa0072130:intron 45.0%
!! TTAACAGCCTCTAAGGCTGA+AGG - chr1_2:44797770-44797789 None:intergenic 45.0%
GTAATCCATTTCGTCCTCTG+AGG + chr1_2:44797833-44797852 Msa0072130:intron 45.0%
! GAAAACCATTAGCTTGGCGA+AGG + chr1_2:44798028-44798047 Msa0072130:CDS 45.0%
TGTATATCGTTCCGGTGACA+GGG - chr1_2:44798067-44798086 None:intergenic 45.0%
TACGTAGTACCATGCAACCA+AGG - chr1_2:44798104-44798123 None:intergenic 45.0%
GTTCAAGTGTCACCGATAAC+AGG + chr1_2:44798146-44798165 Msa0072130:CDS 45.0%
TCAGGCATGGTTGCATATTG+TGG + chr1_2:44798427-44798446 Msa0072130:intron 45.0%
GTTGCATATTGTGGTGCAGA+CGG + chr1_2:44798436-44798455 Msa0072130:CDS 45.0%
TTCTAATACCACGCCAGAAG+AGG - chr1_2:44798525-44798544 None:intergenic 45.0%
ATGTGGATCAGTGACTGAAG+AGG + chr1_2:44798970-44798989 Msa0072130:CDS 45.0%
GGGAAAGGAGAGTTTGATAC+TGG - chr1_2:44799019-44799038 None:intergenic 45.0%
TCTTGCAGCTTCAATGGGAA+AGG - chr1_2:44799034-44799053 None:intergenic 45.0%
CCTCTTTCTTGCAGCTTCAA+TGG - chr1_2:44799040-44799059 None:intergenic 45.0%
CCATTGAAGCTGCAAGAAAG+AGG + chr1_2:44799037-44799056 Msa0072130:CDS 45.0%
! GGGTTTGGAATCTGTATCTG+AGG + chr1_2:44799265-44799284 Msa0072130:CDS 45.0%
!! CTGAGGAAGCATTGTCTTCT+CGG + chr1_2:44799282-44799301 Msa0072130:CDS 45.0%
!! TGAGGAAGCATTGTCTTCTC+GGG + chr1_2:44799283-44799302 Msa0072130:CDS 45.0%
ACAGCTCTTGCTTGTAGAGA+TGG + chr1_2:44799362-44799381 Msa0072130:CDS 45.0%
!! TCAACTCCGGGAGTATTTGT+CGG - chr1_2:44799392-44799411 None:intergenic 45.0%
CGAAGTCTTTCCTCCTAAGA+TGG + chr1_2:44799442-44799461 Msa0072130:CDS 45.0%
AGTGAGAGATGGTTGTGCTT+TGG + chr1_2:44799503-44799522 Msa0072130:CDS 45.0%
GTGAGAGATGGTTGTGCTTT+GGG + chr1_2:44799504-44799523 Msa0072130:CDS 45.0%
TGAGAGATGGTTGTGCTTTG+GGG + chr1_2:44799505-44799524 Msa0072130:CDS 45.0%
!!! TTTTAAATATGAATATATTT+TGG - chr1_2:44795336-44795355 None:intergenic 5.0%
!! AAATATATTCATATTTAAAA+AGG + chr1_2:44795336-44795355 Msa0072130:intron 5.0%
!! AATATATTCATATTTAAAAA+GGG + chr1_2:44795337-44795356 Msa0072130:intron 5.0%
GCTACAGCGGCAAATGATGA+AGG + chr1_2:44787749-44787768 Msa0072130:CDS 50.0%
ACAGCGGCAAATGATGAAGG+TGG + chr1_2:44787752-44787771 Msa0072130:CDS 50.0%
! GCAAATGATGAAGGTGGTGG+TGG + chr1_2:44787758-44787777 Msa0072130:CDS 50.0%
CACCATTGCCAAACTCTGTG+AGG + chr1_2:44787856-44787875 Msa0072130:CDS 50.0%
CTATAACTTCATGCCTGGCG+AGG - chr1_2:44788633-44788652 None:intergenic 50.0%
GCAAAAGGAGGAGCAACTTG+GGG + chr1_2:44788753-44788772 Msa0072130:CDS 50.0%
! GGGCATTAGATTGGTGTCCT+AGG + chr1_2:44789003-44789022 Msa0072130:CDS 50.0%
! GATTGGTGTCCTAGGATGCA+TGG + chr1_2:44789011-44789030 Msa0072130:CDS 50.0%
! TTGGTGTCCTAGGATGCATG+GGG + chr1_2:44789013-44789032 Msa0072130:CDS 50.0%
CAAGTGGGTGAGATGCAAAG+GGG + chr1_2:44789519-44789538 Msa0072130:intron 50.0%
GACAAACCGCAATTGTTCCC+CGG - chr1_2:44789921-44789940 None:intergenic 50.0%
TAGCTATTAGGCCGAGTCCA+TGG - chr1_2:44790109-44790128 None:intergenic 50.0%
ATCATATCTCCCCGGGAAGA+AGG + chr1_2:44790579-44790598 Msa0072130:CDS 50.0%
GGGACCAAGTACATAGCATC+TGG + chr1_2:44790784-44790803 Msa0072130:CDS 50.0%
GAACTGCCAGGAACTACATC+TGG - chr1_2:44790994-44791013 None:intergenic 50.0%
ACCACATGGTAGCCCTGTAT+TGG + chr1_2:44791272-44791291 Msa0072130:CDS 50.0%
TCCAATACAGGGCTACCATG+TGG - chr1_2:44791276-44791295 None:intergenic 50.0%
GCTAGGCATGACACAACTCT+AGG - chr1_2:44791342-44791361 None:intergenic 50.0%
AGGTGGCATGGGATGTCAAA+TGG + chr1_2:44791373-44791392 Msa0072130:CDS 50.0%
TGGCATGGGATGTCAAATGG+AGG + chr1_2:44791376-44791395 Msa0072130:CDS 50.0%
! GGGCTATCTTGCTGTCTTGT+TGG + chr1_2:44791437-44791456 Msa0072130:CDS 50.0%
! CTTGCTGTCTTGTTGGGCAA+TGG + chr1_2:44791444-44791463 Msa0072130:CDS 50.0%
CTTGTTGGGCAATGGATCTC+TGG + chr1_2:44791452-44791471 Msa0072130:CDS 50.0%
! GAGGTACCATTGTGGGTTAC+TGG - chr1_2:44792281-44792300 None:intergenic 50.0%
! GGAGGGTTTCCAAAGTGCTT+GGG - chr1_2:44792450-44792469 None:intergenic 50.0%
! AGGAGGGTTTCCAAAGTGCT+TGG - chr1_2:44792451-44792470 None:intergenic 50.0%
! AGTGGAGCACTTAAGCAGCT+TGG - chr1_2:44792502-44792521 None:intergenic 50.0%
! TTGGAGATTATGGGGTGCCT+AGG - chr1_2:44792551-44792570 None:intergenic 50.0%
TGAAACGTGGCAGCTTACAG+AGG + chr1_2:44792844-44792863 Msa0072130:CDS 50.0%
ACATAGAGCTGCTGCCATAG+TGG + chr1_2:44792938-44792957 Msa0072130:intron 50.0%
CATAGAGCTGCTGCCATAGT+GGG + chr1_2:44792939-44792958 Msa0072130:intron 50.0%
ATAGAGCTGCTGCCATAGTG+GGG + chr1_2:44792940-44792959 Msa0072130:intron 50.0%
! GCCATAGTGGGGTTAAGGAA+AGG + chr1_2:44792951-44792970 Msa0072130:intron 50.0%
CCCTTTCCTTAACCCCACTA+TGG - chr1_2:44792955-44792974 None:intergenic 50.0%
AGTGGGGTTAAGGAAAGGGT+TGG + chr1_2:44792956-44792975 Msa0072130:intron 50.0%
GTCGTGTAACTGGAGATCAC+AGG - chr1_2:44793049-44793068 None:intergenic 50.0%
GGAATATGCGGTCGTGTAAC+TGG - chr1_2:44793059-44793078 None:intergenic 50.0%
GGAACCTCTCAATGCATTGG+TGG - chr1_2:44793080-44793099 None:intergenic 50.0%
TCACAGCATTCCACTGACAG+TGG + chr1_2:44793820-44793839 Msa0072130:intron 50.0%
! TTACTTGCTGGCTGCCATGA+TGG + chr1_2:44793872-44793891 Msa0072130:CDS 50.0%
! TATCTGTGTAGGGCATCCAG+TGG + chr1_2:44794065-44794084 Msa0072130:intron 50.0%
! ATCTGTGTAGGGCATCCAGT+GGG + chr1_2:44794066-44794085 Msa0072130:intron 50.0%
GAGTGGTCTAAGGGAGCTAT+AGG + chr1_2:44794223-44794242 Msa0072130:intron 50.0%
TCTAAGGGAGCTATAGGGTG+AGG + chr1_2:44794229-44794248 Msa0072130:intron 50.0%
CTAGTTGGGGTTGCTAAGGA+AGG + chr1_2:44795026-44795045 Msa0072130:intron 50.0%
! GTTGCATGGGCTCCTTTTGA+AGG + chr1_2:44795174-44795193 Msa0072130:CDS 50.0%
ACTATTCAGGGGTTATGGGG+GGG - chr1_2:44795492-44795511 None:intergenic 50.0%
!!! GCGCGCTTTTGAAATCACTG+TGG + chr1_2:44795886-44795905 Msa0072130:intron 50.0%
!!! GCCTCAAGTTTTGGGACCTA+CGG + chr1_2:44796254-44796273 Msa0072130:CDS 50.0%
ACCGTAGGTCCCAAAACTTG+AGG - chr1_2:44796258-44796277 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_2:44796368-44796387 Msa0072130:intron 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr1_2:44796376-44796395 None:intergenic 50.0%
GAAAAACTCAAGTCCCGCAC+TGG - chr1_2:44796435-44796454 None:intergenic 50.0%
GTTGGGTGGACCAGCAAAAT+TGG + chr1_2:44796952-44796971 Msa0072130:intron 50.0%
AAGAGTGAGGGTCCACATTC+TGG - chr1_2:44797008-44797027 None:intergenic 50.0%
TCTCTCCATGAACCTTGAGC+TGG + chr1_2:44797517-44797536 Msa0072130:intron 50.0%
! TGATTCTCTGGGAAGGTTGG+AGG - chr1_2:44797861-44797880 None:intergenic 50.0%
!! TGGATTGGCAGTCAAAGCCA+AGG + chr1_2:44797890-44797909 Msa0072130:CDS 50.0%
GTGTATATCGTTCCGGTGAC+AGG - chr1_2:44798068-44798087 None:intergenic 50.0%
GTCACCGGAACGATATACAC+TGG + chr1_2:44798068-44798087 Msa0072130:CDS 50.0%
GCAATTACCAGCACCTCTTC+TGG + chr1_2:44798509-44798528 Msa0072130:intron 50.0%
! GAGACGTGGATCTTTTGCCT+TGG + chr1_2:44798734-44798753 Msa0072130:intron 50.0%
TGCAATGCTGCCATCTTAGG+AGG - chr1_2:44799455-44799474 None:intergenic 50.0%
GAGAGATGGTTGTGCTTTGG+GGG + chr1_2:44799506-44799525 Msa0072130:CDS 50.0%
!! TTGTGCTTTGGGGGAGCTAA+TGG + chr1_2:44799515-44799534 Msa0072130:CDS 50.0%
GCGGCAAATGATGAAGGTGG+TGG + chr1_2:44787755-44787774 Msa0072130:CDS 55.0%
! CTTAGGGTTAGCACCACTGC+TGG - chr1_2:44787789-44787808 None:intergenic 55.0%
! CAGCAGTGGTGCTAACCCTA+AGG + chr1_2:44787787-44787806 Msa0072130:CDS 55.0%
CTGGCGAGGACTTGTACCTT+AGG - chr1_2:44788619-44788638 None:intergenic 55.0%
CTAAGGTACAAGTCCTCGCC+AGG + chr1_2:44788617-44788636 Msa0072130:intron 55.0%
!! GCAGAGGTGCCGTGCAAATA+TGG + chr1_2:44790521-44790540 Msa0072130:CDS 55.0%
GCCCATTCGATGCTTGCATG+AGG - chr1_2:44791421-44791440 None:intergenic 55.0%
TTGTAGGTGGGGGAGGAAAG+GGG - chr1_2:44792414-44792433 None:intergenic 55.0%
GTTGTAGGTGGGGGAGGAAA+GGG - chr1_2:44792415-44792434 None:intergenic 55.0%
AGTTGTAGGTGGGGGAGGAA+AGG - chr1_2:44792416-44792435 None:intergenic 55.0%
TCAGTAGTTGTAGGTGGGGG+AGG - chr1_2:44792421-44792440 None:intergenic 55.0%
! GCAGTGCTATGATGGGGACT+TGG - chr1_2:44792570-44792589 None:intergenic 55.0%
GCTCTCAGTGCATGAGGAAG+AGG - chr1_2:44792753-44792772 None:intergenic 55.0%
! CTGCTGCCATAGTGGGGTTA+AGG + chr1_2:44792946-44792965 Msa0072130:intron 55.0%
GCATTCCACTGACAGTGGAG+TGG + chr1_2:44793825-44793844 Msa0072130:intron 55.0%
ACTGACCACTCCACTGTCAG+TGG - chr1_2:44793833-44793852 None:intergenic 55.0%
! TGCTGGCTGCCATGATGGAA+CGG + chr1_2:44793877-44793896 Msa0072130:CDS 55.0%
CTAAGGAAGGGAGCTGTGCT+GGG + chr1_2:44795039-44795058 Msa0072130:intron 55.0%
CTTGAGGCCTTCATGTCCTG+CGG - chr1_2:44796242-44796261 None:intergenic 55.0%
TGCTGGTCCACCCAACAAGT+TGG - chr1_2:44796948-44796967 None:intergenic 55.0%
AGGAGCCTCAGAGGACGAAA+TGG - chr1_2:44797841-44797860 None:intergenic 55.0%
TGCAGCCTTCGCCAAGCTAA+TGG - chr1_2:44798036-44798055 None:intergenic 55.0%
GCAAATGACCTCCCTGTCAC+CGG + chr1_2:44798053-44798072 Msa0072130:CDS 55.0%
ATATCGTTCCGGTGACAGGG+AGG - chr1_2:44798064-44798083 None:intergenic 55.0%
GCAAGAGCTGTGCTTTCAGC+TGG - chr1_2:44799353-44799372 None:intergenic 55.0%
! GGTGCACCGACAAATACTCC+CGG + chr1_2:44799383-44799402 Msa0072130:CDS 55.0%
TCGGGAGTAGTCCCAGAATC+CGG - chr1_2:44799425-44799444 None:intergenic 55.0%
! GGTGGTGGTAGTACCAGCAG+TGG + chr1_2:44787773-44787792 Msa0072130:CDS 60.0%
TCAGGCTCCCCATGCATCCT+AGG - chr1_2:44789023-44789042 None:intergenic 60.0%
GGTGCCTCACTTACTGGCAG+AGG + chr1_2:44790505-44790524 Msa0072130:CDS 60.0%
GGCACCTCTGCCAGTAAGTG+AGG - chr1_2:44790512-44790531 None:intergenic 60.0%
GCTAAGGAAGGGAGCTGTGC+TGG + chr1_2:44795038-44795057 Msa0072130:intron 60.0%
GAAGGTTGGAGGAGCCTCAG+AGG - chr1_2:44797850-44797869 None:intergenic 60.0%
!!! CGGTGCTGCTGTCCGTTTTC+AGG + chr1_2:44798456-44798475 Msa0072130:CDS 60.0%
TACCAGCACCTCTTCTGGCG+TGG + chr1_2:44798514-44798533 Msa0072130:intron 60.0%
! TACCACGCCAGAAGAGGTGC+TGG - chr1_2:44798519-44798538 None:intergenic 60.0%
GCTGTTGCTGCTCATCCGCC+TGG + chr1_2:44790463-44790482 Msa0072130:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 44787441 44799766 44787441 ID=Msa0072130;Name=Msa0072130
chr1_2 mRNA 44787441 44799766 44787441 ID=Msa0072130-mRNA-1;Parent=Msa0072130;Name=Msa0072130-mRNA-1;_AED=0.15;_eAED=0.15;_QI=179|0.92|0.86|1|1|1|15|165|974
chr1_2 exon 44787441 44787948 44787441 ID=Msa0072130-mRNA-1:exon:13502;Parent=Msa0072130-mRNA-1
chr1_2 exon 44788486 44788621 44788486 ID=Msa0072130-mRNA-1:exon:13503;Parent=Msa0072130-mRNA-1
chr1_2 exon 44788745 44788797 44788745 ID=Msa0072130-mRNA-1:exon:13504;Parent=Msa0072130-mRNA-1
chr1_2 exon 44788971 44789061 44788971 ID=Msa0072130-mRNA-1:exon:13505;Parent=Msa0072130-mRNA-1
chr1_2 exon 44790457 44791478 44790457 ID=Msa0072130-mRNA-1:exon:13506;Parent=Msa0072130-mRNA-1
chr1_2 exon 44792740 44792865 44792740 ID=Msa0072130-mRNA-1:exon:13507;Parent=Msa0072130-mRNA-1
chr1_2 exon 44793826 44793898 44793826 ID=Msa0072130-mRNA-1:exon:13508;Parent=Msa0072130-mRNA-1
chr1_2 exon 44794943 44794988 44794943 ID=Msa0072130-mRNA-1:exon:13509;Parent=Msa0072130-mRNA-1
chr1_2 exon 44795124 44795196 44795124 ID=Msa0072130-mRNA-1:exon:13510;Parent=Msa0072130-mRNA-1
chr1_2 exon 44796210 44796275 44796210 ID=Msa0072130-mRNA-1:exon:13511;Parent=Msa0072130-mRNA-1
chr1_2 exon 44797834 44797911 44797834 ID=Msa0072130-mRNA-1:exon:13512;Parent=Msa0072130-mRNA-1
chr1_2 exon 44797995 44798179 44797995 ID=Msa0072130-mRNA-1:exon:13513;Parent=Msa0072130-mRNA-1
chr1_2 exon 44798431 44798477 44798431 ID=Msa0072130-mRNA-1:exon:13514;Parent=Msa0072130-mRNA-1
chr1_2 exon 44798914 44799154 44798914 ID=Msa0072130-mRNA-1:exon:13515;Parent=Msa0072130-mRNA-1
chr1_2 exon 44799243 44799766 44799243 ID=Msa0072130-mRNA-1:exon:13516;Parent=Msa0072130-mRNA-1
chr1_2 five_prime_UTR 44787441 44787619 44787441 ID=Msa0072130-mRNA-1:five_prime_utr;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44787620 44787948 44787620 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44788486 44788621 44788486 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44788745 44788797 44788745 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44788971 44789061 44788971 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44790457 44791478 44790457 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44792740 44792865 44792740 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44793826 44793898 44793826 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44794943 44794988 44794943 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44795124 44795196 44795124 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44796210 44796275 44796210 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44797834 44797911 44797834 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44797995 44798179 44797995 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44798431 44798477 44798431 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44798914 44799154 44798914 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 CDS 44799243 44799601 44799243 ID=Msa0072130-mRNA-1:cds;Parent=Msa0072130-mRNA-1
chr1_2 three_prime_UTR 44799602 44799766 44799602 ID=Msa0072130-mRNA-1:three_prime_utr;Parent=Msa0072130-mRNA-1
Gene Sequence

>Msa0072130

ATGGAAGAGGAAAATGAGAACCTAACTATTGCCACACTATTTAATATCAAAGAGAAAAAGAAGAAGAAAAAGAAAAAGAAGAAAAAGACGAAGGCAAATAAAGAGAGCGAAAGAGTTGCTGATGATTCTGCTACAGCGGCAAATGATGAAGGTGGTGGTGGTAGTACCAGCAGTGGTGCTAACCCTAAGGTTTCTTTGTTTGATATCTCTGTCGAGAATTTCTTTGAAGACATGGACACCATTGCCAAACTCTGTGAGGAAGAAGAACGCAACACTGCTGTTGAGCAAAGCGAGATCAAGAGAATGTTTTCTTCCGTCACTTTTTTAAGAGAATGGAAGGATTTTAAATATCCATCTAAAAGCATTAGGTTTACTTACGGAATTGGGAGCTCTGAGTGTTATGAGAGAAATGATATCAAAGATGACATAAACTTACCTCAGTTTTCATCTGCCACTGTTCCTAAGCATAATATGCAAAAGGAGGAGCAACTTGGGGATGCCAAACCTCAAGAATCCAAAGACTTTGTGATGAATGTTGGAGGTTCTGTATGGGCATTAGATTGGTGTCCTAGGATGCATGGGGAGCCTGATTGTTCAGTTAAATGTGAGTTCATTGCTGTTGCTGCTCATCCGCCTGGTTCATCTTATCACAAAATGGGTGCCTCACTTACTGGCAGAGGTGCCGTGCAAATATGGTGTCTTCTAAATATCAGGGAACACAGCGAAGAAGTATCATATCTCCCCGGGAAGAAGGAAAAAAAACCTAAAAAAGACACGTGCACAAATGACAAATCGATAGAAATAAAGAGGCCTAGAGGAAGGCCTAGAAAGAATCCTACTGAAAACAACGAAGCAATATCTCCTATTACAAACAAGAGAAAAAGAGGAAGACCAAAAAAGAATCCAACTGTAATAGCAGTGGATAGTACAAATTGTGGGACCAAGTACATAGCATCTGGTAGTGTCTCAAATGGGAATAATGAAAACAATGAAGAAATACTTCGTATTACATACAAGAGTAAAAAAAGGCCTAAAGGAAGACCGAAAAAGAATTCAAAAGATGGAACAGTGAGTGATCCAAATTGTGAGAACCAATTTGTTCCTCTTACTGTTCAACTTCCAGATTCAGCTGAATTTATTTCTCCAGATGTAGTTCCTGGCAGTTCTGATGAACATCATTCACAACAATTTTCTAATACAAAGGGAAAGAATGCCAAGAAAGCTGCTGCGAATACAAAGGGAAAGAATGCTAAGAAAGCTGCTCCGAATACAAAGGGAAAGAATGCCAAGAAAGCTGCTTCTGCATACGATTCAGAAACTCTTGTTGCAAGAAGTAGGTTGGATATTAATCATAGGGAAAGAAGTTGTAGCCCAGATACAAGTAGGCCATTATTGATTCAGTGTGAGAATGAGGCAAATCATCAACCACATGGTAGCCCTGTATTGGAACCTCAAGCATCTACTTGTCCCATTCCACAAAATGTAGCATTGCCTAGAGTTGTGTCATGCCTAGCTCATAATGGAAAGGTGGCATGGGATGTCAAATGGAGGCCTCTTAGCAATCTTGATTCCTCATGCAAGCATCGAATGGGCTATCTTGCTGTCTTGTTGGGCAATGGATCTCTGGAAGTGTGGGAGGTTCCTCTTCCTCATGCACTGAGAGCAGTTTATACGCAGAAGGAGGGCACAGATCCTCGTTTTATAAAATTGGAGCCTGTATTCAAATGCTCAATGTTGAAACGTGGCAGCTTACAGAGCATTCCACTGACAGTGGAGTGGTCAGTTACTCCCCCTCATGATTATTTACTTGCTGGCTGCCATGATGGAACGGTTGCTCTGTGGAAATTCTCTACAAATTCTTCATCTAAATGTGATGATACAAAGCCTATACTTTGTTTCGGTGGGGATACTGTTCCTATTAGAACAGTTGCATGGGCTCCTTTTGAAGGTGATCCAGAGACTTCTAACTTAATAGTAACCGCAGGACATGAAGGCCTCAAGTTTTGGGACCTACGTAATCCATTTCGTCCTCTGAGGCTCCTCCAACCTTCCCAGAGAATCATTTACAGTCTGGATTGGCAGTCAAAGCCAAGCTGTATCATTATGTGTTTTGAGGATGGAACAATGAAAACCATTAGCTTGGCGAAGGCTGCAAATGACCTCCCTGTCACCGGAACGATATACACTGGAAAGAAACAACCTTGGTTGCATGGTACTACGTATTCATCTTATGCCATTTGGAGTGTTCAAGTGTCACCGATAACAGGTACTGTTTTCGGCATGGTTGCATATTGTGGTGCAGACGGTGCTGCTGTCCGTTTTCAGCTAACAACTAAATCAGTGGAGACTGATCATTCGCACAATCGACTTCCATTCTTTCTATGTGGATCAGTGACTGAAGAGGAATCAACTATCATTGTCAACACTCCAGTATCAAACTCTCCTTTCCCATTGAAGCTGCAAGAAAGAGGCAGATATTCAGAATCTTTCCGAGACTTATTATCCAAAAGCAGAATTGCGTTTAATCAAATGATAAAAGCTTCTACTGATGATTGTCAGATTTTAGCTCTTTGTGATGGTGATAATATGGGTTTGGAATCTGTATCTGAGGAAGCATTGTCTTCTCGGGAGCAAACCAAAAGACCAAAACTGAGCTGTAGCAGAAAGAAAAAACCAGCTGAAAGCACAGCTCTTGCTTGTAGAGATGGTGCACCGACAAATACTCCCGGAGTTGATAATGAAAAGCCGGATTCTGGGACTACTCCCGAAGTCTTTCCTCCTAAGATGGCAGCATTGCATAAAGTGAGATGGAACATTAACAAGGGTAGTGAGAGATGGTTGTGCTTTGGGGGAGCTAATGGACTTGTACGTTGTCAGGAAATTGTTTACTCTAATATTGATAAGAAAATGGCCTTGAAGAGATGA
Protein sequence

>Msa0072130

MEEENENLTIATLFNIKEKKKKKKKKKKKTKANKESERVADDSATAANDEGGGGSTSSGANPKVSLFDISVENFFEDMDTIAKLCEEEERNTAVEQSEIKRMFSSVTFLREWKDFKYPSKSIRFTYGIGSSECYERNDIKDDINLPQFSSATVPKHNMQKEEQLGDAKPQESKDFVMNVGGSVWALDWCPRMHGEPDCSVKCEFIAVAAHPPGSSYHKMGASLTGRGAVQIWCLLNIREHSEEVSYLPGKKEKKPKKDTCTNDKSIEIKRPRGRPRKNPTENNEAISPITNKRKRGRPKKNPTVIAVDSTNCGTKYIASGSVSNGNNENNEEILRITYKSKKRPKGRPKKNSKDGTVSDPNCENQFVPLTVQLPDSAEFISPDVVPGSSDEHHSQQFSNTKGKNAKKAAANTKGKNAKKAAPNTKGKNAKKAASAYDSETLVARSRLDINHRERSCSPDTSRPLLIQCENEANHQPHGSPVLEPQASTCPIPQNVALPRVVSCLAHNGKVAWDVKWRPLSNLDSSCKHRMGYLAVLLGNGSLEVWEVPLPHALRAVYTQKEGTDPRFIKLEPVFKCSMLKRGSLQSIPLTVEWSVTPPHDYLLAGCHDGTVALWKFSTNSSSKCDDTKPILCFGGDTVPIRTVAWAPFEGDPETSNLIVTAGHEGLKFWDLRNPFRPLRLLQPSQRIIYSLDWQSKPSCIIMCFEDGTMKTISLAKAANDLPVTGTIYTGKKQPWLHGTTYSSYAIWSVQVSPITGTVFGMVAYCGADGAAVRFQLTTKSVETDHSHNRLPFFLCGSVTEEESTIIVNTPVSNSPFPLKLQERGRYSESFRDLLSKSRIAFNQMIKASTDDCQILALCDGDNMGLESVSEEALSSREQTKRPKLSCSRKKKPAESTALACRDGAPTNTPGVDNEKPDSGTTPEVFPPKMAALHKVRWNINKGSERWLCFGGANGLVRCQEIVYSNIDKKMALKR*