AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072990 MtrunA17_Chr1g0180121 93.388 242 16 0 1 242 1 242 2.52e-168 464
Msa0072990 MtrunA17_Chr1g0180221 85.537 242 35 0 1 242 41 282 7.50e-154 429
Msa0072990 MtrunA17_Chr1g0180161 85.537 242 35 0 1 242 1 242 9.35e-153 425
Msa0072990 MtrunA17_Chr1g0180231 84.298 242 38 0 1 242 1 242 1.34e-151 421
Msa0072990 MtrunA17_Chr1g0179871 84.298 242 38 0 1 242 1 242 1.34e-151 421
Msa0072990 MtrunA17_Chr1g0179891 81.857 237 43 0 6 242 1 237 6.83e-144 402
Msa0072990 MtrunA17_Chr1g0179851 80.687 233 45 0 10 242 7 239 1.21e-139 391
Msa0072990 MtrunA17_Chr7g0265011 72.385 239 66 0 4 242 49 287 5.55e-131 371
Msa0072990 MtrunA17_Chr2g0312181 62.762 239 87 2 6 242 5 243 1.27e-102 297
Msa0072990 MtrunA17_Chr1g0156711 53.878 245 107 4 3 241 1 245 8.34e-89 265
Msa0072990 MtrunA17_Chr3g0142781 53.878 245 106 4 1 242 9 249 3.06e-84 254
Msa0072990 MtrunA17_Chr8g0371781 55.066 227 94 3 22 241 28 253 3.85e-83 250
Msa0072990 MtrunA17_Chr4g0037331 54.286 245 99 7 1 241 4 239 4.24e-83 251
Msa0072990 MtrunA17_Chr5g0405611 52.941 238 100 7 8 242 80 308 8.57e-81 247
Msa0072990 MtrunA17_Chr8g0357311 51.417 247 109 6 1 242 7 247 1.64e-79 239
Msa0072990 MtrunA17_Chr8g0352471 52.049 244 108 6 3 242 9 247 3.40e-79 241
Msa0072990 MtrunA17_Chr1g0154591 55.983 234 93 8 15 242 3 232 1.40e-77 234
Msa0072990 MtrunA17_Chr5g0405581 50.400 250 111 6 1 242 7 251 3.50e-77 235
Msa0072990 MtrunA17_Chr8g0371771 48.936 235 111 4 8 241 17 243 9.16e-77 234
Msa0072990 MtrunA17_Chr8g0351851 48.936 235 114 5 10 241 6 237 1.15e-76 231
Msa0072990 MtrunA17_Chr4g0037351 49.791 239 113 5 10 242 11 248 1.27e-74 229
Msa0072990 MtrunA17_Chr3g0141341 53.125 224 100 5 21 242 11 231 3.66e-73 222
Msa0072990 MtrunA17_Chr5g0428801 49.593 246 110 6 3 242 13 250 5.35e-72 222
Msa0072990 MtrunA17_Chr8g0392961 50.228 219 103 5 26 242 31 245 2.12e-69 213
Msa0072990 MtrunA17_Chr6g0482741 47.345 226 113 5 19 242 19 240 4.44e-69 212
Msa0072990 MtrunA17_Chr2g0311521 46.531 245 115 5 12 242 5 247 4.46e-69 229
Msa0072990 MtrunA17_Chr7g0239131 45.306 245 128 6 1 242 1 242 1.51e-67 208
Msa0072990 MtrunA17_Chr3g0112091 42.917 240 127 6 10 242 1 237 3.73e-67 207
Msa0072990 MtrunA17_Chr2g0311561 45.299 234 120 5 15 242 1 232 6.80e-66 206
Msa0072990 MtrunA17_Chr6g0452331 42.169 249 134 6 2 242 6 252 2.12e-64 201
Msa0072990 MtrunA17_Chr4g0031221 43.830 235 125 5 12 241 19 251 8.55e-64 199
Msa0072990 MtrunA17_Chr2g0311551 45.614 228 119 4 18 242 19 244 4.50e-63 212
Msa0072990 MtrunA17_Chr5g0424221 43.200 250 122 9 1 241 1 239 2.07e-60 191
Msa0072990 MtrunA17_Chr5g0406771 44.068 177 91 5 10 180 1 175 2.78e-46 152
Msa0072990 MtrunA17_Chr2g0311501 43.478 184 94 7 65 242 3 182 1.07e-45 151
Msa0072990 MtrunA17_Chr2g0311531 39.565 230 108 10 17 242 20 222 2.65e-45 152
Msa0072990 MtrunA17_Chr5g0397821 39.910 223 111 8 22 242 24 225 1.24e-44 150
Msa0072990 MtrunA17_Chr5g0397831 37.402 254 129 10 1 242 1 236 3.89e-43 145
Msa0072990 MtrunA17_Chr8g0386341 38.075 239 116 10 8 242 38 248 7.56e-42 143
Msa0072990 MtrunA17_Chr2g0309611 34.821 224 139 5 19 240 31 249 1.94e-41 142
Msa0072990 MtrunA17_Chr1g0180181 70.787 89 25 1 155 242 11 99 4.33e-39 131
Msa0072990 MtrunA17_Chr1g0179911 33.469 245 138 7 6 242 11 238 2.25e-35 126
Msa0072990 MtrunA17_Chr1g0180171 61.333 75 28 1 2 75 14 88 1.43e-22 88.6
Msa0072990 MtrunA17_Chr8g0386351 33.962 159 90 6 1 153 43 192 1.52e-20 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072990 AT1G20030.1 56.000 225 94 3 23 242 4 228 8.16e-87 259
Msa0072990 AT1G20030.2 55.459 229 97 3 19 242 17 245 9.76e-87 260
Msa0072990 AT4G38660.1 55.649 239 96 5 8 242 13 245 2.03e-85 258
Msa0072990 AT1G75800.1 51.210 248 115 4 1 242 1 248 1.14e-84 255
Msa0072990 AT1G19320.1 54.000 250 102 7 1 241 1 246 2.91e-84 251
Msa0072990 AT4G38660.2 56.951 223 89 4 21 242 7 223 6.35e-84 253
Msa0072990 AT1G75040.1 54.357 241 94 8 10 242 7 239 1.61e-82 246
Msa0072990 AT2G17860.1 51.440 243 108 5 9 242 8 249 8.73e-82 245
Msa0072990 AT4G24180.5 53.200 250 100 7 4 242 8 251 5.76e-81 243
Msa0072990 AT4G24180.2 53.200 250 100 7 4 242 8 251 2.17e-80 244
Msa0072990 AT4G24180.6 52.756 254 100 8 4 242 8 256 4.18e-80 241
Msa0072990 AT4G24180.1 52.756 254 100 8 4 242 8 256 1.09e-79 242
Msa0072990 AT1G75050.1 53.361 238 104 7 8 242 10 243 3.15e-78 236
Msa0072990 AT1G75030.1 52.227 247 109 8 1 242 1 243 9.69e-78 235
Msa0072990 AT4G38670.3 49.791 239 116 3 8 242 9 247 1.95e-77 235
Msa0072990 AT4G38670.1 49.791 239 116 3 8 242 9 247 1.95e-77 235
Msa0072990 AT4G36010.1 51.282 234 105 3 17 242 18 250 3.05e-77 235
Msa0072990 AT4G36010.2 51.282 234 105 3 17 242 18 250 3.05e-77 235
Msa0072990 AT4G38670.2 52.489 221 101 3 26 242 11 231 1.66e-76 232
Msa0072990 AT5G38280.1 49.590 244 112 6 10 242 7 250 9.68e-74 236
Msa0072990 AT5G38280.2 49.590 244 112 6 10 242 7 250 1.38e-73 236
Msa0072990 AT4G24180.4 52.137 234 96 6 4 226 8 236 4.03e-73 226
Msa0072990 AT4G24180.3 51.681 238 96 7 4 226 8 241 2.07e-72 224
Msa0072990 AT1G73620.1 50.673 223 104 5 22 242 42 260 2.54e-72 221
Msa0072990 AT1G18250.2 49.561 228 109 5 17 242 17 240 6.04e-71 218
Msa0072990 AT1G18250.1 50.224 223 105 5 22 242 21 239 2.02e-70 216
Msa0072990 AT5G24620.1 48.790 248 117 6 3 242 6 251 3.84e-69 218
Msa0072990 AT5G24620.4 48.790 248 117 6 3 242 61 306 8.13e-69 219
Msa0072990 AT5G24620.3 48.790 248 117 6 3 242 82 327 1.03e-68 219
Msa0072990 AT2G28790.1 41.365 249 137 4 1 241 1 248 3.84e-64 200
Msa0072990 AT2G28790.2 41.365 249 137 4 1 241 26 273 5.35e-64 201
Msa0072990 AT5G02140.1 45.148 237 126 4 8 242 7 241 5.56e-64 201
Msa0072990 AT5G02140.2 45.148 237 126 4 8 242 7 241 5.80e-64 199
Msa0072990 AT5G40020.1 42.616 237 130 5 10 242 14 248 1.24e-61 194
Msa0072990 AT1G77700.3 47.248 218 104 7 25 241 64 271 2.43e-60 193
Msa0072990 AT1G77700.2 47.248 218 104 7 25 241 64 271 3.58e-60 192
Msa0072990 AT1G77700.1 47.248 218 104 7 25 241 92 299 1.78e-59 192
Msa0072990 AT4G18253.1 39.331 239 136 4 6 242 7 238 3.08e-53 172
Msa0072990 AT1G70250.1 42.731 227 114 8 25 242 148 367 1.65e-50 176
Msa0072990 AT4G18250.1 39.916 238 136 5 6 242 41 272 6.36e-49 171
Msa0072990 AT4G36000.2 53.425 146 60 3 97 242 1 138 4.46e-46 153
Msa0072990 AT4G36000.1 53.425 146 60 3 97 242 1 138 4.46e-46 153
Msa0072990 AT4G11650.1 39.149 235 119 9 10 242 11 223 3.85e-42 144
Msa0072990 AT5G24620.2 54.167 120 48 3 129 242 16 134 6.36e-33 121
Msa0072990 AT2G24810.1 58.228 79 31 2 163 241 116 192 3.15e-23 93.6

Find 77 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCATGGTCAGGTCGATTT+TGG 0.053229 1_2:-46173566 Msa0072990:CDS
AACCCTCAAAACTTATAAAT+TGG 0.200517 1_2:-46174544 Msa0072990:five_prime_UTR
AGCTTTGCATTCCTCTTCTA+TGG 0.241574 1_2:-46174422 Msa0072990:intron
AATCGCCATATTCTTGTTAT+TGG 0.267785 1_2:+46174466 None:intergenic
CCCGCAGAGCTTCAATTAAA+AGG 0.268083 1_2:-46173282 Msa0072990:CDS
TGATCTCCAGTTAAGGTTCC+TGG 0.276179 1_2:+46173657 None:intergenic
TTAGAAGGTATAGTTCAATT+AGG 0.280151 1_2:+46173038 None:intergenic
TAGAAGGTATAGTTCAATTA+GGG 0.301329 1_2:+46173039 None:intergenic
TAGGCATAGCTATAAGCTTC+TGG 0.336607 1_2:+46173123 None:intergenic
GTATGGCCAGGAACCTTAAC+TGG 0.347390 1_2:-46173663 Msa0072990:CDS
AGCACTTTCACTTGCTCTAA+TGG 0.354302 1_2:-46173087 Msa0072990:CDS
CACACAGAGTTGATATTTGC+TGG 0.361358 1_2:+46173306 None:intergenic
ATAAACCAATAACAAGAATA+TGG 0.362702 1_2:-46174471 Msa0072990:exon
GCCACAGCCGATTGCGCGTC+TGG 0.381507 1_2:-46173501 Msa0072990:CDS
TGCAATCCCACCAGCAACTT+TGG 0.387031 1_2:-46173454 Msa0072990:CDS
GTTGTTTGAGCATCCCGTTC+GGG 0.400824 1_2:+46173542 None:intergenic
TGCTTGTAAGAGTGCTTGTT+TGG 0.407476 1_2:-46173241 Msa0072990:CDS
GTGTTTAAAATAAATTAAAC+AGG 0.411110 1_2:-46172999 Msa0072990:three_prime_UTR
GTAATTTCAACCAAAGTTGC+TGG 0.422022 1_2:+46173444 None:intergenic
GAGACATAACTGTATTTAGA+AGG 0.425497 1_2:+46173023 None:intergenic
TGATATTTCATACTTATTTG+TGG 0.431329 1_2:+46172931 None:intergenic
TGTTGTTTGAGCATCCCGTT+CGG 0.437948 1_2:+46173541 None:intergenic
GAAATTACCGTGGCATCAAA+TGG 0.464138 1_2:-46173429 Msa0072990:CDS
GACCTTCCTTCCCCATGGTC+AGG 0.467806 1_2:-46173576 Msa0072990:CDS
AAATATCTCGGAGTAATTTG+TGG 0.469027 1_2:+46173158 None:intergenic
AGAGCTTCAATTAAAAGGTT+CGG 0.473590 1_2:-46173277 Msa0072990:CDS
CCCAAAATCGACCTGACCAT+GGG 0.475932 1_2:+46173565 None:intergenic
AACTTGACCAGACGCGCAAT+CGG 0.479141 1_2:+46173494 None:intergenic
GTGACTCCACAAGGCGGGAG+TGG 0.480942 1_2:-46173351 Msa0072990:CDS
AAGCCTCAACTATCAACAAC+AGG 0.497185 1_2:-46173633 Msa0072990:CDS
ACCAGACGCGCAATCGGCTG+TGG 0.503521 1_2:+46173500 None:intergenic
AATATCTCGGAGTAATTTGT+GGG 0.505487 1_2:+46173159 None:intergenic
CAAGTTGAGTGCAATGGTGC+TGG 0.505724 1_2:-46173477 Msa0072990:CDS
AAACCTGTTGTTGATAGTTG+AGG 0.508027 1_2:+46173630 None:intergenic
CTTCAATTAAAAGGTTCGGA+TGG 0.512580 1_2:-46173273 Msa0072990:CDS
AGCTATAAGCTTCTGGACAT+TGG 0.513068 1_2:+46173130 None:intergenic
CAATCGCCACTCCCGCCTTG+TGG 0.533640 1_2:+46173345 None:intergenic
CAGAATGTGATGGCATAGCT+AGG 0.537085 1_2:+46173063 None:intergenic
TTCAATTAAAAGGTTCGGAT+GGG 0.546771 1_2:-46173272 Msa0072990:CDS
TTGTCCTCCATTTGATGCCA+CGG 0.548889 1_2:+46173422 None:intergenic
TTTAAAATAAATTAAACAGG+TGG 0.551624 1_2:-46172996 Msa0072990:three_prime_UTR
GCCCAAAATCGACCTGACCA+TGG 0.557623 1_2:+46173564 None:intergenic
ATAGATGTGGATACACTGTA+TGG 0.562425 1_2:-46173680 Msa0072990:CDS
ACCGATCAATATTGTTGTCG+TGG 0.565802 1_2:-46173210 Msa0072990:CDS
TGTGGATACACTGTATGGCC+AGG 0.574199 1_2:-46173675 Msa0072990:CDS
TACGATGTGAGCAACGTGGA+CGG 0.575852 1_2:-46173393 Msa0072990:CDS
AGAAGAGGAATGCAAAGCTA+AGG 0.578555 1_2:+46174426 None:intergenic
GATATTTGCTGGACAACTAG+AGG 0.578884 1_2:+46173317 None:intergenic
ATTTCAACCAAAGTTGCTGG+TGG 0.585079 1_2:+46173447 None:intergenic
CCAATGTCTGTGACTCCACA+AGG 0.587289 1_2:-46173360 Msa0072990:CDS
GACCTGACCATGGGGAAGGA+AGG 0.587448 1_2:+46173574 None:intergenic
CCTTGTGGAGTCACAGACAT+TGG 0.588932 1_2:+46173360 None:intergenic
TGTCTGTGACTCCACAAGGC+GGG 0.590620 1_2:-46173356 Msa0072990:CDS
ACATTGGTTCTCAAATATCT+CGG 0.592729 1_2:+46173146 None:intergenic
AATGAAATATACCATAGAAG+AGG 0.595352 1_2:+46174411 None:intergenic
TTTCAACCAAAGTTGCTGGT+GGG 0.596283 1_2:+46173448 None:intergenic
AATCGACCTGACCATGGGGA+AGG 0.604645 1_2:+46173570 None:intergenic
AGTGCTGCTCTTATCATCGT+AGG 0.606860 1_2:+46173104 None:intergenic
GCTAAGGCAGAGAGCAACAT+GGG 0.610146 1_2:+46174442 None:intergenic
TCCACGACAACAATATTGAT+CGG 0.620824 1_2:+46173209 None:intergenic
GTGACATTCACAAATAGATG+TGG 0.620825 1_2:-46173693 Msa0072990:CDS
CAGTGGACCTTCCTTCCCCA+TGG 0.623305 1_2:-46173581 Msa0072990:CDS
ATCTCGGAGTAATTTGTGGG+TGG 0.627398 1_2:+46173162 None:intergenic
ACAAGGAGCATCAAGATCAG+TGG 0.632227 1_2:-46173598 Msa0072990:CDS
AACTTTGGTTGAAATTACCG+TGG 0.634789 1_2:-46173439 Msa0072990:CDS
TGTGGGTGGACATGTCGCCT+CGG 0.637786 1_2:+46173176 None:intergenic
CAATTAGGGACAGAATGTGA+TGG 0.639803 1_2:+46173053 None:intergenic
TGCAGCTGTTGGAGGAGCCA+CGG 0.641900 1_2:-46173715 Msa0072990:intron
TCTGGTCAAGTTGAGTGCAA+TGG 0.646954 1_2:-46173483 Msa0072990:CDS
AGCTAAGGCAGAGAGCAACA+TGG 0.647033 1_2:+46174441 None:intergenic
ATTACCGTGGCATCAAATGG+AGG 0.665292 1_2:-46173426 Msa0072990:CDS
CCAAAATCGACCTGACCATG+GGG 0.685201 1_2:+46173566 None:intergenic
ATGTCTGTGACTCCACAAGG+CGG 0.706299 1_2:-46173357 Msa0072990:CDS
ACGGGATGCTCAAACAACAA+CGG 0.720380 1_2:-46173537 Msa0072990:CDS
TTTCTACGATGTGAGCAACG+TGG 0.737287 1_2:-46173397 Msa0072990:CDS
TCTATTTGTGAATGTCACCG+TGG 0.760029 1_2:+46173698 None:intergenic
TCGTGGAAGTTACAACACCG+AGG 0.789168 1_2:-46173193 Msa0072990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTATTGTTATTTTTTTTA+AGG - chr1_2:46174560-46174579 Msa0072990:five_prime_UTR 10.0%
!!! TTGTATTGTTATTTTTTTTA+AGG - chr1_2:46174560-46174579 Msa0072990:five_prime_UTR 10.0%
!!! GTGTTTAAAATAAATTAAAC+AGG - chr1_2:46174423-46174442 Msa0072990:CDS 15.0%
!!! TTTAAAATAAATTAAACAGG+TGG - chr1_2:46174426-46174445 Msa0072990:CDS 15.0%
!!! GTGTTTAAAATAAATTAAAC+AGG - chr1_2:46174423-46174442 Msa0072990:CDS 15.0%
!!! TTTAAAATAAATTAAACAGG+TGG - chr1_2:46174426-46174445 Msa0072990:CDS 15.0%
!!! TTGTTATTGGTTTATCTTTT+TGG + chr1_2:46172946-46172965 None:intergenic 20.0%
!! ATAAACCAATAACAAGAATA+TGG - chr1_2:46172951-46172970 Msa0072990:three_prime_UTR 20.0%
!! GGTTTACATACAATAAATAT+GGG + chr1_2:46173201-46173220 None:intergenic 20.0%
!! TGGTTTACATACAATAAATA+TGG + chr1_2:46173202-46173221 None:intergenic 20.0%
!!! TTATTTTTAACCATATGAAG+AGG + chr1_2:46173267-46173286 None:intergenic 20.0%
!!! TTATCACATTTTTTTCTTGT+AGG - chr1_2:46173429-46173448 Msa0072990:CDS 20.0%
!! TGATATTTCATACTTATTTG+TGG + chr1_2:46174494-46174513 None:intergenic 20.0%
!!! TTGTTATTGGTTTATCTTTT+TGG + chr1_2:46172946-46172965 None:intergenic 20.0%
!! ATAAACCAATAACAAGAATA+TGG - chr1_2:46172951-46172970 Msa0072990:three_prime_UTR 20.0%
!! GGTTTACATACAATAAATAT+GGG + chr1_2:46173201-46173220 None:intergenic 20.0%
!! TGGTTTACATACAATAAATA+TGG + chr1_2:46173202-46173221 None:intergenic 20.0%
!!! TTATTTTTAACCATATGAAG+AGG + chr1_2:46173267-46173286 None:intergenic 20.0%
!!! TTATCACATTTTTTTCTTGT+AGG - chr1_2:46173429-46173448 Msa0072990:CDS 20.0%
!! TGATATTTCATACTTATTTG+TGG + chr1_2:46174494-46174513 None:intergenic 20.0%
! AACCCTCAAAACTTATAAAT+TGG - chr1_2:46172878-46172897 Msa0072990:three_prime_UTR 25.0%
!!! TGCCAATTTATAAGTTTTGA+GGG + chr1_2:46172883-46172902 None:intergenic 25.0%
!! TTGCCAATTTATAAGTTTTG+AGG + chr1_2:46172884-46172903 None:intergenic 25.0%
! AATGAAATATACCATAGAAG+AGG + chr1_2:46173014-46173033 None:intergenic 25.0%
! TAAGCTTATTGAAAATGTAG+TGG + chr1_2:46173043-46173062 None:intergenic 25.0%
! AAGATAACGAGTATAATCTA+GGG + chr1_2:46173376-46173395 None:intergenic 25.0%
! AAAGATAACGAGTATAATCT+AGG + chr1_2:46173377-46173396 None:intergenic 25.0%
! TGTAGGTATCTAAATACTAT+CGG - chr1_2:46173446-46173465 Msa0072990:CDS 25.0%
!! TAGAAGGTATAGTTCAATTA+GGG + chr1_2:46174386-46174405 None:intergenic 25.0%
!! TTAGAAGGTATAGTTCAATT+AGG + chr1_2:46174387-46174406 None:intergenic 25.0%
! AACCCTCAAAACTTATAAAT+TGG - chr1_2:46172878-46172897 Msa0072990:three_prime_UTR 25.0%
!!! TGCCAATTTATAAGTTTTGA+GGG + chr1_2:46172883-46172902 None:intergenic 25.0%
!! TTGCCAATTTATAAGTTTTG+AGG + chr1_2:46172884-46172903 None:intergenic 25.0%
! AATGAAATATACCATAGAAG+AGG + chr1_2:46173014-46173033 None:intergenic 25.0%
! TAAGCTTATTGAAAATGTAG+TGG + chr1_2:46173043-46173062 None:intergenic 25.0%
! AAGATAACGAGTATAATCTA+GGG + chr1_2:46173376-46173395 None:intergenic 25.0%
! AAAGATAACGAGTATAATCT+AGG + chr1_2:46173377-46173396 None:intergenic 25.0%
! TGTAGGTATCTAAATACTAT+CGG - chr1_2:46173446-46173465 Msa0072990:CDS 25.0%
!! TAGAAGGTATAGTTCAATTA+GGG + chr1_2:46174386-46174405 None:intergenic 25.0%
!! TTAGAAGGTATAGTTCAATT+AGG + chr1_2:46174387-46174406 None:intergenic 25.0%
! AATCGCCATATTCTTGTTAT+TGG + chr1_2:46172959-46172978 None:intergenic 30.0%
! TAATTTTTGTATGCAGCTGT+TGG - chr1_2:46173696-46173715 Msa0072990:CDS 30.0%
AGAGCTTCAATTAAAAGGTT+CGG - chr1_2:46174145-46174164 Msa0072990:intron 30.0%
TTCAATTAAAAGGTTCGGAT+GGG - chr1_2:46174150-46174169 Msa0072990:intron 30.0%
! AATATCTCGGAGTAATTTGT+GGG + chr1_2:46174266-46174285 None:intergenic 30.0%
AAATATCTCGGAGTAATTTG+TGG + chr1_2:46174267-46174286 None:intergenic 30.0%
!! ACATTGGTTCTCAAATATCT+CGG + chr1_2:46174279-46174298 None:intergenic 30.0%
GAGACATAACTGTATTTAGA+AGG + chr1_2:46174402-46174421 None:intergenic 30.0%
! GTATGTTTTCGATTACTACA+TGG - chr1_2:46174517-46174536 Msa0072990:five_prime_UTR 30.0%
! AATCGCCATATTCTTGTTAT+TGG + chr1_2:46172959-46172978 None:intergenic 30.0%
! TAATTTTTGTATGCAGCTGT+TGG - chr1_2:46173696-46173715 Msa0072990:CDS 30.0%
AGAGCTTCAATTAAAAGGTT+CGG - chr1_2:46174145-46174164 Msa0072990:intron 30.0%
TTCAATTAAAAGGTTCGGAT+GGG - chr1_2:46174150-46174169 Msa0072990:intron 30.0%
! AATATCTCGGAGTAATTTGT+GGG + chr1_2:46174266-46174285 None:intergenic 30.0%
AAATATCTCGGAGTAATTTG+TGG + chr1_2:46174267-46174286 None:intergenic 30.0%
!! ACATTGGTTCTCAAATATCT+CGG + chr1_2:46174279-46174298 None:intergenic 30.0%
GAGACATAACTGTATTTAGA+AGG + chr1_2:46174402-46174421 None:intergenic 30.0%
! GTATGTTTTCGATTACTACA+TGG - chr1_2:46174517-46174536 Msa0072990:five_prime_UTR 30.0%
CCAACAATCATTATTCGAAG+AGG + chr1_2:46173093-46173112 None:intergenic 35.0%
CCTCTTCGAATAATGATTGT+TGG - chr1_2:46173090-46173109 Msa0072990:CDS 35.0%
ACACATCGACATGTAAAAAG+TGG + chr1_2:46173222-46173241 None:intergenic 35.0%
GTGACATTCACAAATAGATG+TGG - chr1_2:46173729-46173748 Msa0072990:intron 35.0%
ATAGATGTGGATACACTGTA+TGG - chr1_2:46173742-46173761 Msa0072990:intron 35.0%
!! AAACCTGTTGTTGATAGTTG+AGG + chr1_2:46173795-46173814 None:intergenic 35.0%
!!! ATCAACAACAGGTTTTGAGT+TGG - chr1_2:46173800-46173819 Msa0072990:intron 35.0%
!!! TCAACAACAGGTTTTGAGTT+GGG - chr1_2:46173801-46173820 Msa0072990:intron 35.0%
GTAATTTCAACCAAAGTTGC+TGG + chr1_2:46173981-46174000 None:intergenic 35.0%
AACTTTGGTTGAAATTACCG+TGG - chr1_2:46173983-46174002 Msa0072990:intron 35.0%
!! ACCTTTTAATTGAAGCTCTG+CGG + chr1_2:46174144-46174163 None:intergenic 35.0%
CTTCAATTAAAAGGTTCGGA+TGG - chr1_2:46174149-46174168 Msa0072990:intron 35.0%
TCCACGACAACAATATTGAT+CGG + chr1_2:46174216-46174235 None:intergenic 35.0%
CCAACAATCATTATTCGAAG+AGG + chr1_2:46173093-46173112 None:intergenic 35.0%
CCTCTTCGAATAATGATTGT+TGG - chr1_2:46173090-46173109 Msa0072990:CDS 35.0%
ACACATCGACATGTAAAAAG+TGG + chr1_2:46173222-46173241 None:intergenic 35.0%
GTGACATTCACAAATAGATG+TGG - chr1_2:46173729-46173748 Msa0072990:intron 35.0%
ATAGATGTGGATACACTGTA+TGG - chr1_2:46173742-46173761 Msa0072990:intron 35.0%
!! AAACCTGTTGTTGATAGTTG+AGG + chr1_2:46173795-46173814 None:intergenic 35.0%
!!! ATCAACAACAGGTTTTGAGT+TGG - chr1_2:46173800-46173819 Msa0072990:intron 35.0%
!!! TCAACAACAGGTTTTGAGTT+GGG - chr1_2:46173801-46173820 Msa0072990:intron 35.0%
GTAATTTCAACCAAAGTTGC+TGG + chr1_2:46173981-46174000 None:intergenic 35.0%
AACTTTGGTTGAAATTACCG+TGG - chr1_2:46173983-46174002 Msa0072990:intron 35.0%
!! ACCTTTTAATTGAAGCTCTG+CGG + chr1_2:46174144-46174163 None:intergenic 35.0%
CTTCAATTAAAAGGTTCGGA+TGG - chr1_2:46174149-46174168 Msa0072990:intron 35.0%
TCCACGACAACAATATTGAT+CGG + chr1_2:46174216-46174235 None:intergenic 35.0%
AGAAGAGGAATGCAAAGCTA+AGG + chr1_2:46172999-46173018 None:intergenic 40.0%
AGCTTTGCATTCCTCTTCTA+TGG - chr1_2:46173000-46173019 Msa0072990:three_prime_UTR 40.0%
AATGGCCACAATTCATTGGT+GGG + chr1_2:46173140-46173159 None:intergenic 40.0%
ATCCAATGGCCACAATTCAT+TGG + chr1_2:46173144-46173163 None:intergenic 40.0%
CACTTCTCTTCCTCTTCATA+TGG - chr1_2:46173254-46173273 Msa0072990:CDS 40.0%
! TTTTTGTATGCAGCTGTTGG+AGG - chr1_2:46173699-46173718 Msa0072990:CDS 40.0%
TCTATTTGTGAATGTCACCG+TGG + chr1_2:46173727-46173746 None:intergenic 40.0%
! AGGCTTTTGATCTCCAGTTA+AGG + chr1_2:46173775-46173794 None:intergenic 40.0%
AAGCCTCAACTATCAACAAC+AGG - chr1_2:46173789-46173808 Msa0072990:intron 40.0%
TTTCAACCAAAGTTGCTGGT+GGG + chr1_2:46173977-46173996 None:intergenic 40.0%
ATTTCAACCAAAGTTGCTGG+TGG + chr1_2:46173978-46173997 None:intergenic 40.0%
GAAATTACCGTGGCATCAAA+TGG - chr1_2:46173993-46174012 Msa0072990:intron 40.0%
! GATATTTGCTGGACAACTAG+AGG + chr1_2:46174108-46174127 None:intergenic 40.0%
!! CACACAGAGTTGATATTTGC+TGG + chr1_2:46174119-46174138 None:intergenic 40.0%
!! CCTTTTAATTGAAGCTCTGC+GGG + chr1_2:46174143-46174162 None:intergenic 40.0%
!! TGCTTGTAAGAGTGCTTGTT+TGG - chr1_2:46174181-46174200 Msa0072990:intron 40.0%
ACCGATCAATATTGTTGTCG+TGG - chr1_2:46174212-46174231 Msa0072990:intron 40.0%
AGCTATAAGCTTCTGGACAT+TGG + chr1_2:46174295-46174314 None:intergenic 40.0%
TAGGCATAGCTATAAGCTTC+TGG + chr1_2:46174302-46174321 None:intergenic 40.0%
AGCACTTTCACTTGCTCTAA+TGG - chr1_2:46174335-46174354 Msa0072990:intron 40.0%
CAATTAGGGACAGAATGTGA+TGG + chr1_2:46174372-46174391 None:intergenic 40.0%
AGAAGAGGAATGCAAAGCTA+AGG + chr1_2:46172999-46173018 None:intergenic 40.0%
AGCTTTGCATTCCTCTTCTA+TGG - chr1_2:46173000-46173019 Msa0072990:three_prime_UTR 40.0%
AATGGCCACAATTCATTGGT+GGG + chr1_2:46173140-46173159 None:intergenic 40.0%
ATCCAATGGCCACAATTCAT+TGG + chr1_2:46173144-46173163 None:intergenic 40.0%
CACTTCTCTTCCTCTTCATA+TGG - chr1_2:46173254-46173273 Msa0072990:CDS 40.0%
! TTTTTGTATGCAGCTGTTGG+AGG - chr1_2:46173699-46173718 Msa0072990:CDS 40.0%
TCTATTTGTGAATGTCACCG+TGG + chr1_2:46173727-46173746 None:intergenic 40.0%
! AGGCTTTTGATCTCCAGTTA+AGG + chr1_2:46173775-46173794 None:intergenic 40.0%
AAGCCTCAACTATCAACAAC+AGG - chr1_2:46173789-46173808 Msa0072990:intron 40.0%
TTTCAACCAAAGTTGCTGGT+GGG + chr1_2:46173977-46173996 None:intergenic 40.0%
ATTTCAACCAAAGTTGCTGG+TGG + chr1_2:46173978-46173997 None:intergenic 40.0%
GAAATTACCGTGGCATCAAA+TGG - chr1_2:46173993-46174012 Msa0072990:intron 40.0%
! GATATTTGCTGGACAACTAG+AGG + chr1_2:46174108-46174127 None:intergenic 40.0%
!! CACACAGAGTTGATATTTGC+TGG + chr1_2:46174119-46174138 None:intergenic 40.0%
!! CCTTTTAATTGAAGCTCTGC+GGG + chr1_2:46174143-46174162 None:intergenic 40.0%
!! TGCTTGTAAGAGTGCTTGTT+TGG - chr1_2:46174181-46174200 Msa0072990:intron 40.0%
ACCGATCAATATTGTTGTCG+TGG - chr1_2:46174212-46174231 Msa0072990:intron 40.0%
AGCTATAAGCTTCTGGACAT+TGG + chr1_2:46174295-46174314 None:intergenic 40.0%
TAGGCATAGCTATAAGCTTC+TGG + chr1_2:46174302-46174321 None:intergenic 40.0%
AGCACTTTCACTTGCTCTAA+TGG - chr1_2:46174335-46174354 Msa0072990:intron 40.0%
CAATTAGGGACAGAATGTGA+TGG + chr1_2:46174372-46174391 None:intergenic 40.0%
ACAACCCCACCAATGAATTG+TGG - chr1_2:46173132-46173151 Msa0072990:CDS 45.0%
ATGGCCACAATTCATTGGTG+GGG + chr1_2:46173139-46173158 None:intergenic 45.0%
CAATGGCCACAATTCATTGG+TGG + chr1_2:46173141-46173160 None:intergenic 45.0%
CACCAATGAATTGTGGCCAT+TGG - chr1_2:46173139-46173158 Msa0072990:CDS 45.0%
GCTACATATGCTGCATCCAA+TGG + chr1_2:46173158-46173177 None:intergenic 45.0%
TGATCTCCAGTTAAGGTTCC+TGG + chr1_2:46173768-46173787 None:intergenic 45.0%
!!! ACAGGTTTTGAGTTGGGACA+AGG - chr1_2:46173807-46173826 Msa0072990:intron 45.0%
!! ACAAGGAGCATCAAGATCAG+TGG - chr1_2:46173824-46173843 Msa0072990:intron 45.0%
! TGTTGTTTGAGCATCCCGTT+CGG + chr1_2:46173884-46173903 None:intergenic 45.0%
ACGGGATGCTCAAACAACAA+CGG - chr1_2:46173885-46173904 Msa0072990:intron 45.0%
!! TCTGGTCAAGTTGAGTGCAA+TGG - chr1_2:46173939-46173958 Msa0072990:intron 45.0%
ATTACCGTGGCATCAAATGG+AGG - chr1_2:46173996-46174015 Msa0072990:intron 45.0%
TTGTCCTCCATTTGATGCCA+CGG + chr1_2:46174003-46174022 None:intergenic 45.0%
TTTCTACGATGTGAGCAACG+TGG - chr1_2:46174025-46174044 Msa0072990:intron 45.0%
CCCGCAGAGCTTCAATTAAA+AGG - chr1_2:46174140-46174159 Msa0072990:intron 45.0%
! ATCTCGGAGTAATTTGTGGG+TGG + chr1_2:46174263-46174282 None:intergenic 45.0%
! AGTGCTGCTCTTATCATCGT+AGG + chr1_2:46174321-46174340 None:intergenic 45.0%
CAGAATGTGATGGCATAGCT+AGG + chr1_2:46174362-46174381 None:intergenic 45.0%
ACAACCCCACCAATGAATTG+TGG - chr1_2:46173132-46173151 Msa0072990:CDS 45.0%
ATGGCCACAATTCATTGGTG+GGG + chr1_2:46173139-46173158 None:intergenic 45.0%
CAATGGCCACAATTCATTGG+TGG + chr1_2:46173141-46173160 None:intergenic 45.0%
CACCAATGAATTGTGGCCAT+TGG - chr1_2:46173139-46173158 Msa0072990:CDS 45.0%
GCTACATATGCTGCATCCAA+TGG + chr1_2:46173158-46173177 None:intergenic 45.0%
TGATCTCCAGTTAAGGTTCC+TGG + chr1_2:46173768-46173787 None:intergenic 45.0%
!!! ACAGGTTTTGAGTTGGGACA+AGG - chr1_2:46173807-46173826 Msa0072990:intron 45.0%
!! ACAAGGAGCATCAAGATCAG+TGG - chr1_2:46173824-46173843 Msa0072990:intron 45.0%
! TGTTGTTTGAGCATCCCGTT+CGG + chr1_2:46173884-46173903 None:intergenic 45.0%
ACGGGATGCTCAAACAACAA+CGG - chr1_2:46173885-46173904 Msa0072990:intron 45.0%
!! TCTGGTCAAGTTGAGTGCAA+TGG - chr1_2:46173939-46173958 Msa0072990:intron 45.0%
ATTACCGTGGCATCAAATGG+AGG - chr1_2:46173996-46174015 Msa0072990:intron 45.0%
TTGTCCTCCATTTGATGCCA+CGG + chr1_2:46174003-46174022 None:intergenic 45.0%
TTTCTACGATGTGAGCAACG+TGG - chr1_2:46174025-46174044 Msa0072990:intron 45.0%
CCCGCAGAGCTTCAATTAAA+AGG - chr1_2:46174140-46174159 Msa0072990:intron 45.0%
! ATCTCGGAGTAATTTGTGGG+TGG + chr1_2:46174263-46174282 None:intergenic 45.0%
! AGTGCTGCTCTTATCATCGT+AGG + chr1_2:46174321-46174340 None:intergenic 45.0%
CAGAATGTGATGGCATAGCT+AGG + chr1_2:46174362-46174381 None:intergenic 45.0%
!!! TTTTTTTTTTTTTAAAGAAA+GGG + chr1_2:46173316-46173335 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTAAAGAA+AGG + chr1_2:46173317-46173336 None:intergenic 5.0%
!!! TTTTTTTTTTTTTAAAGAAA+GGG + chr1_2:46173316-46173335 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTAAAGAA+AGG + chr1_2:46173317-46173336 None:intergenic 5.0%
GCTAAGGCAGAGAGCAACAT+GGG + chr1_2:46172983-46173002 None:intergenic 50.0%
AGCTAAGGCAGAGAGCAACA+TGG + chr1_2:46172984-46173003 None:intergenic 50.0%
TGTGGATACACTGTATGGCC+AGG - chr1_2:46173747-46173766 Msa0072990:intron 50.0%
GTATGGCCAGGAACCTTAAC+TGG - chr1_2:46173759-46173778 Msa0072990:intron 50.0%
CCAAAATCGACCTGACCATG+GGG + chr1_2:46173859-46173878 None:intergenic 50.0%
CCCAAAATCGACCTGACCAT+GGG + chr1_2:46173860-46173879 None:intergenic 50.0%
!! CCCATGGTCAGGTCGATTTT+GGG - chr1_2:46173857-46173876 Msa0072990:intron 50.0%
GTTGTTTGAGCATCCCGTTC+GGG + chr1_2:46173883-46173902 None:intergenic 50.0%
AACTTGACCAGACGCGCAAT+CGG + chr1_2:46173931-46173950 None:intergenic 50.0%
! CAAGTTGAGTGCAATGGTGC+TGG - chr1_2:46173945-46173964 Msa0072990:intron 50.0%
TGCAATCCCACCAGCAACTT+TGG - chr1_2:46173968-46173987 Msa0072990:intron 50.0%
TACGATGTGAGCAACGTGGA+CGG - chr1_2:46174029-46174048 Msa0072990:intron 50.0%
CCTTGTGGAGTCACAGACAT+TGG + chr1_2:46174065-46174084 None:intergenic 50.0%
CCAATGTCTGTGACTCCACA+AGG - chr1_2:46174062-46174081 Msa0072990:intron 50.0%
ATGTCTGTGACTCCACAAGG+CGG - chr1_2:46174065-46174084 Msa0072990:intron 50.0%
TCGTGGAAGTTACAACACCG+AGG - chr1_2:46174229-46174248 Msa0072990:intron 50.0%
GCTAAGGCAGAGAGCAACAT+GGG + chr1_2:46172983-46173002 None:intergenic 50.0%
AGCTAAGGCAGAGAGCAACA+TGG + chr1_2:46172984-46173003 None:intergenic 50.0%
TGTGGATACACTGTATGGCC+AGG - chr1_2:46173747-46173766 Msa0072990:intron 50.0%
GTATGGCCAGGAACCTTAAC+TGG - chr1_2:46173759-46173778 Msa0072990:intron 50.0%
CCAAAATCGACCTGACCATG+GGG + chr1_2:46173859-46173878 None:intergenic 50.0%
CCCAAAATCGACCTGACCAT+GGG + chr1_2:46173860-46173879 None:intergenic 50.0%
!! CCCATGGTCAGGTCGATTTT+GGG - chr1_2:46173857-46173876 Msa0072990:intron 50.0%
GTTGTTTGAGCATCCCGTTC+GGG + chr1_2:46173883-46173902 None:intergenic 50.0%
AACTTGACCAGACGCGCAAT+CGG + chr1_2:46173931-46173950 None:intergenic 50.0%
! CAAGTTGAGTGCAATGGTGC+TGG - chr1_2:46173945-46173964 Msa0072990:intron 50.0%
TGCAATCCCACCAGCAACTT+TGG - chr1_2:46173968-46173987 Msa0072990:intron 50.0%
TACGATGTGAGCAACGTGGA+CGG - chr1_2:46174029-46174048 Msa0072990:intron 50.0%
CCTTGTGGAGTCACAGACAT+TGG + chr1_2:46174065-46174084 None:intergenic 50.0%
CCAATGTCTGTGACTCCACA+AGG - chr1_2:46174062-46174081 Msa0072990:intron 50.0%
ATGTCTGTGACTCCACAAGG+CGG - chr1_2:46174065-46174084 Msa0072990:intron 50.0%
TCGTGGAAGTTACAACACCG+AGG - chr1_2:46174229-46174248 Msa0072990:intron 50.0%
AATCGACCTGACCATGGGGA+AGG + chr1_2:46173855-46173874 None:intergenic 55.0%
!! CCCCATGGTCAGGTCGATTT+TGG - chr1_2:46173856-46173875 Msa0072990:intron 55.0%
GCCCAAAATCGACCTGACCA+TGG + chr1_2:46173861-46173880 None:intergenic 55.0%
!! AGGTCGATTTTGGGCCCGAA+CGG - chr1_2:46173866-46173885 Msa0072990:intron 55.0%
TGTCTGTGACTCCACAAGGC+GGG - chr1_2:46174066-46174085 Msa0072990:intron 55.0%
AATCGACCTGACCATGGGGA+AGG + chr1_2:46173855-46173874 None:intergenic 55.0%
!! CCCCATGGTCAGGTCGATTT+TGG - chr1_2:46173856-46173875 Msa0072990:intron 55.0%
GCCCAAAATCGACCTGACCA+TGG + chr1_2:46173861-46173880 None:intergenic 55.0%
!! AGGTCGATTTTGGGCCCGAA+CGG - chr1_2:46173866-46173885 Msa0072990:intron 55.0%
TGTCTGTGACTCCACAAGGC+GGG - chr1_2:46174066-46174085 Msa0072990:intron 55.0%
TGCAGCTGTTGGAGGAGCCA+CGG - chr1_2:46173707-46173726 Msa0072990:CDS 60.0%
CAGTGGACCTTCCTTCCCCA+TGG - chr1_2:46173841-46173860 Msa0072990:intron 60.0%
GACCTTCCTTCCCCATGGTC+AGG - chr1_2:46173846-46173865 Msa0072990:intron 60.0%
GACCTGACCATGGGGAAGGA+AGG + chr1_2:46173851-46173870 None:intergenic 60.0%
!! GGTCGATTTTGGGCCCGAAC+GGG - chr1_2:46173867-46173886 Msa0072990:intron 60.0%
TGTGGGTGGACATGTCGCCT+CGG + chr1_2:46174249-46174268 None:intergenic 60.0%
TGCAGCTGTTGGAGGAGCCA+CGG - chr1_2:46173707-46173726 Msa0072990:CDS 60.0%
CAGTGGACCTTCCTTCCCCA+TGG - chr1_2:46173841-46173860 Msa0072990:intron 60.0%
GACCTTCCTTCCCCATGGTC+AGG - chr1_2:46173846-46173865 Msa0072990:intron 60.0%
GACCTGACCATGGGGAAGGA+AGG + chr1_2:46173851-46173870 None:intergenic 60.0%
!! GGTCGATTTTGGGCCCGAAC+GGG - chr1_2:46173867-46173886 Msa0072990:intron 60.0%
TGTGGGTGGACATGTCGCCT+CGG + chr1_2:46174249-46174268 None:intergenic 60.0%
ACCAGACGCGCAATCGGCTG+TGG + chr1_2:46173925-46173944 None:intergenic 65.0%
GTGACTCCACAAGGCGGGAG+TGG - chr1_2:46174071-46174090 Msa0072990:intron 65.0%
CAATCGCCACTCCCGCCTTG+TGG + chr1_2:46174080-46174099 None:intergenic 65.0%
ACCAGACGCGCAATCGGCTG+TGG + chr1_2:46173925-46173944 None:intergenic 65.0%
GTGACTCCACAAGGCGGGAG+TGG - chr1_2:46174071-46174090 Msa0072990:intron 65.0%
CAATCGCCACTCCCGCCTTG+TGG + chr1_2:46174080-46174099 None:intergenic 65.0%
GCCACAGCCGATTGCGCGTC+TGG - chr1_2:46173921-46173940 Msa0072990:intron 70.0%
GCCACAGCCGATTGCGCGTC+TGG - chr1_2:46173921-46173940 Msa0072990:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 46172836 46174608 46172836 ID=Msa0072990;Name=Msa0072990
chr1_2 mRNA 46172836 46174608 46172836 ID=Msa0072990-mRNA-1;Parent=Msa0072990;Name=Msa0072990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=134|1|1|1|1|1|2|220|242
chr1_2 exon 46172836 46173732 46172836 ID=Msa0072990-mRNA-1:exon:14000;Parent=Msa0072990-mRNA-1
chr1_2 exon 46174423 46174608 46174423 ID=Msa0072990-mRNA-1:exon:13999;Parent=Msa0072990-mRNA-1
chr1_2 five_prime_UTR 46174475 46174608 46174475 ID=Msa0072990-mRNA-1:five_prime_utr;Parent=Msa0072990-mRNA-1
chr1_2 CDS 46174423 46174474 46174423 ID=Msa0072990-mRNA-1:cds;Parent=Msa0072990-mRNA-1
chr1_2 CDS 46173056 46173732 46173056 ID=Msa0072990-mRNA-1:cds;Parent=Msa0072990-mRNA-1
chr1_2 three_prime_UTR 46172836 46173055 46172836 ID=Msa0072990-mRNA-1:three_prime_utr;Parent=Msa0072990-mRNA-1
Gene Sequence

>Msa0072990

ATGGCGATTACCCATGTTGCTCTCTGCCTTAGCTTTGCATTCCTCTTCTATGCTGTTGGAGGAGCCACGGTGACATTCACAAATAGATGTGGATACACTGTATGGCCAGGAACCTTAACTGGAGATCAAAAGCCTCAACTATCAACAACAGGTTTTGAGTTGGGACAAGGAGCATCAAGATCAGTGGACCTTCCTTCCCCATGGTCAGGTCGATTTTGGGCCCGAACGGGATGCTCAAACAACAACGGAAGATTTAGTTGTGCCACAGCCGATTGCGCGTCTGGTCAAGTTGAGTGCAATGGTGCTGGTGCAATCCCACCAGCAACTTTGGTTGAAATTACCGTGGCATCAAATGGAGGACAAGATTTCTACGATGTGAGCAACGTGGACGGATTCAACGTGCCAATGTCTGTGACTCCACAAGGCGGGAGTGGCGATTGCAAAGCCTCTAGTTGTCCAGCAAATATCAACTCTGTGTGTCCCGCAGAGCTTCAATTAAAAGGTTCGGATGGGAGTGTCGTTGCTTGTAAGAGTGCTTGTTTGGCTTTTAACACCGATCAATATTGTTGTCGTGGAAGTTACAACACCGAGGCGACATGTCCACCCACAAATTACTCCGAGATATTTGAGAACCAATGTCCAGAAGCTTATAGCTATGCCTACGATGATAAGAGCAGCACTTTCACTTGCTCTAATGGACCTAGCTATGCCATCACATTCTGTCCCTAA
Protein sequence

>Msa0072990

MAITHVALCLSFAFLFYAVGGATVTFTNRCGYTVWPGTLTGDQKPQLSTTGFELGQGASRSVDLPSPWSGRFWARTGCSNNNGRFSCATADCASGQVECNGAGAIPPATLVEITVASNGGQDFYDVSNVDGFNVPMSVTPQGGSGDCKASSCPANINSVCPAELQLKGSDGSVVACKSACLAFNTDQYCCRGSYNTEATCPPTNYSEIFENQCPEAYSYAYDDKSSTFTCSNGPSYAITFCP*