Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073230 | XP_039683430.1 | 92.381 | 630 | 33 | 5 | 1 | 626 | 1 | 619 | 0.0 | 1159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073230 | sp|F4KFB3|PTST3_ARATH | 36.453 | 609 | 306 | 17 | 45 | 625 | 41 | 596 | 9.93e-94 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073230 | A0A072VJE8 | 91.785 | 633 | 34 | 6 | 1 | 626 | 1 | 622 | 0.0 | 1148 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0073230 | Msa0121430 | 0.897346 | 1.537739e-76 | -8.615850e-47 |
| Msa0073230 | Msa0166050 | 0.894631 | 2.056002e-75 | -8.615850e-47 |
| Msa0073230 | Msa0769390 | 0.820799 | 5.666972e-53 | -8.615850e-47 |
| Msa0073230 | Msa0789690 | 0.816331 | 5.842449e-52 | -8.615850e-47 |
| Msa0073230 | Msa1267220 | 0.806647 | 7.433035e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073230 | MtrunA17_Chr1g0180511 | 91.785 | 633 | 34 | 6 | 1 | 626 | 1 | 622 | 0.0 | 1148 |
| Msa0073230 | MtrunA17_Chr5g0415861 | 34.615 | 130 | 73 | 2 | 480 | 609 | 389 | 506 | 9.20e-13 | 71.2 |
| Msa0073230 | MtrunA17_Chr3g0110931 | 33.155 | 187 | 85 | 9 | 462 | 625 | 131 | 300 | 3.95e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073230 | AT5G03420.1 | 36.453 | 609 | 306 | 17 | 45 | 625 | 41 | 596 | 1.01e-94 | 303 |
| Msa0073230 | AT1G27070.1 | 31.469 | 143 | 86 | 1 | 480 | 622 | 399 | 529 | 8.18e-14 | 74.7 |
| Msa0073230 | AT5G39790.1 | 31.088 | 193 | 96 | 8 | 457 | 625 | 94 | 273 | 8.07e-12 | 66.6 |
| Msa0073230 | AT5G39790.3 | 33.621 | 116 | 63 | 3 | 515 | 625 | 174 | 280 | 5.13e-11 | 64.3 |
Find 190 sgRNAs with CRISPR-Local
Find 581 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTGAGGATCCATCTTTAT+TGG | 0.210353 | 1_2:+46686991 | None:intergenic |
| GAGGCTGAAGAAAGTCTTTC+AGG | 0.211074 | 1_2:-46687603 | Msa0073230:CDS |
| CCACCATCGCTGTATCTATT+TGG | 0.233113 | 1_2:-46685497 | Msa0073230:three_prime_UTR |
| TACCCAGGAAATCAAGATTT+TGG | 0.263422 | 1_2:-46686590 | Msa0073230:intron |
| TCCTTGTCAAAATGAGTAAT+TGG | 0.264078 | 1_2:+46690527 | None:intergenic |
| TATAGTAGTAGTGGTGTAAA+TGG | 0.271902 | 1_2:-46693796 | Msa0073230:exon |
| AGAATGCGATGACGCTTTAA+TGG | 0.274132 | 1_2:-46691827 | Msa0073230:CDS |
| CACTTCATTCAACTTGTCTA+TGG | 0.293386 | 1_2:-46691515 | Msa0073230:CDS |
| CCGTGTGGTTGTGGTGGTTT+TGG | 0.307864 | 1_2:+46693626 | None:intergenic |
| GGAGAAAACGATTGCTTCAT+TGG | 0.311763 | 1_2:-46685476 | Msa0073230:three_prime_UTR |
| AACAATGCCATGGCACATAA+TGG | 0.319841 | 1_2:-46690741 | Msa0073230:CDS |
| GGTATCAACTGAATTTCTTC+AGG | 0.320026 | 1_2:-46692148 | Msa0073230:CDS |
| TAGATAAAATTTGTTGTTGA+TGG | 0.320425 | 1_2:-46686370 | Msa0073230:CDS |
| CAGAGATGTGTGAAGCAGTT+TGG | 0.333304 | 1_2:+46693744 | None:intergenic |
| CCTATCATTCATCCTTGTCC+TGG | 0.345357 | 1_2:-46693865 | None:intergenic |
| TCCATGCCAACAGAAATTTC+TGG | 0.345810 | 1_2:-46691886 | Msa0073230:CDS |
| GAAAGTTGGACCAGCCTCTT+TGG | 0.349591 | 1_2:-46690683 | Msa0073230:intron |
| ATTGAGGATCCATCTTTATT+GGG | 0.352743 | 1_2:+46686992 | None:intergenic |
| ACCACTGTGGATAATGATTT+AGG | 0.354121 | 1_2:-46691952 | Msa0073230:CDS |
| GAAAGGATTAGTTTATGATT+AGG | 0.356681 | 1_2:-46685608 | Msa0073230:three_prime_UTR |
| TACATAGGAATTGAAGATAA+TGG | 0.357393 | 1_2:-46685833 | Msa0073230:three_prime_UTR |
| CTAGCTACTGACTCCCTTTG+TGG | 0.358855 | 1_2:+46686331 | None:intergenic |
| AACATTGATTCTTTAGAAAC+GGG | 0.360442 | 1_2:-46692354 | Msa0073230:CDS |
| TAGATGATGCATTCTGGTTC+AGG | 0.364201 | 1_2:-46686275 | Msa0073230:exon |
| AGTGAGAGGGAGAGAAATAG+TGG | 0.365796 | 1_2:+46693668 | None:intergenic |
| ATATTAGACTTACCTTCAAC+TGG | 0.371243 | 1_2:+46691451 | None:intergenic |
| AGAGATGTGTGAAGCAGTTT+GGG | 0.371482 | 1_2:+46693745 | None:intergenic |
| AGAGAAAGAGTTCAGTCGTT+TGG | 0.375021 | 1_2:-46691710 | Msa0073230:CDS |
| GCTGATTTCTTCCTCTGCCT+TGG | 0.376594 | 1_2:+46687668 | None:intergenic |
| TTAGGAGAAAATAAACAATT+AGG | 0.377868 | 1_2:-46685590 | Msa0073230:three_prime_UTR |
| TCCAATCAAGTTGTTCCATC+TGG | 0.387208 | 1_2:-46690705 | Msa0073230:CDS |
| GAGACAGTTCCAACTCCTTC+TGG | 0.394600 | 1_2:+46689032 | None:intergenic |
| AGTAGATAGATGATGCATTC+TGG | 0.398258 | 1_2:-46686281 | Msa0073230:exon |
| GAATGCGATGACGCTTTAAT+GGG | 0.407613 | 1_2:-46691826 | Msa0073230:CDS |
| CAACATTGATTCTTTAGAAA+CGG | 0.409475 | 1_2:-46692355 | Msa0073230:CDS |
| ATTTAAATGTGCATACTAGA+TGG | 0.410241 | 1_2:+46685708 | None:intergenic |
| TCCAGATGGAACAACTTGAT+TGG | 0.410526 | 1_2:+46690704 | None:intergenic |
| TTCTCTCTATTGTCAACATC+AGG | 0.412640 | 1_2:+46691727 | None:intergenic |
| AAACTCAGAGCCAGAGGTTG+TGG | 0.414256 | 1_2:+46691597 | None:intergenic |
| TTTCTGTTGGCATGGAACTT+TGG | 0.418429 | 1_2:+46691893 | None:intergenic |
| TACTTTCAGCTCAGCTGAAA+AGG | 0.420378 | 1_2:+46693839 | None:intergenic |
| CGTCAATTTCTCGACGAAGT+TGG | 0.426510 | 1_2:-46693446 | Msa0073230:CDS |
| ACAATGCCATGGCACATAAT+GGG | 0.428974 | 1_2:-46690740 | Msa0073230:CDS |
| GAGGTGGCTGGTAGCTTCAA+TGG | 0.431007 | 1_2:-46687024 | Msa0073230:CDS |
| TGATTTGTCCATAGAGCAAA+AGG | 0.443744 | 1_2:-46691677 | Msa0073230:CDS |
| GCCATGGCATTGTTATCTTC+AGG | 0.448831 | 1_2:+46690750 | None:intergenic |
| GATATTGAGGTTCTATCAAC+AGG | 0.455374 | 1_2:-46692297 | Msa0073230:intron |
| AAAATATCCGAGGATTCTAC+AGG | 0.459760 | 1_2:+46692063 | None:intergenic |
| GAACTTTGGCTATCGAAGTT+CGG | 0.460096 | 1_2:+46691907 | None:intergenic |
| CAACTTGTCTATGGAGGAAA+GGG | 0.462031 | 1_2:-46691506 | Msa0073230:CDS |
| AGAACAGATTGAGAAGGAAA+AGG | 0.463574 | 1_2:-46689002 | Msa0073230:intron |
| TCCGTGGAAGGAACTGTCAA+TGG | 0.466430 | 1_2:+46691778 | None:intergenic |
| AGTTGTTCCATCTGGAAAGT+TGG | 0.466950 | 1_2:-46690697 | Msa0073230:CDS |
| TATGCACTTGTTGTTGGTGT+TGG | 0.468497 | 1_2:+46693713 | None:intergenic |
| TTTAGAACCTTGATCCATCA+TGG | 0.470651 | 1_2:+46686950 | None:intergenic |
| AGAGAATATGCACTTGTTGT+TGG | 0.473316 | 1_2:+46693707 | None:intergenic |
| GTCCATAGAGCAAAAGGACT+GGG | 0.475132 | 1_2:-46691671 | Msa0073230:CDS |
| TCCGTCTGACAATGTTTGCC+AGG | 0.475420 | 1_2:+46692424 | None:intergenic |
| GCGGTGCTGTGGCTTTATCC+TGG | 0.477203 | 1_2:-46686564 | Msa0073230:CDS |
| CTATCATTCATCCTTGTCCT+GGG | 0.478875 | 1_2:-46693864 | None:intergenic |
| ACCAGAAATTTCTGTTGGCA+TGG | 0.480364 | 1_2:+46691885 | None:intergenic |
| CAGGTTCTTGTTGAATTCTG+TGG | 0.486855 | 1_2:-46687063 | Msa0073230:CDS |
| GATGATGTTCCCACAACCTC+TGG | 0.487197 | 1_2:-46691607 | Msa0073230:CDS |
| GTATCAACTGAATTTCTTCA+GGG | 0.491308 | 1_2:-46692147 | Msa0073230:CDS |
| ATAGTAGTAGTGGTGTAAAT+GGG | 0.494585 | 1_2:-46693795 | Msa0073230:exon |
| GCTTTATCCTGGTGTATATG+AGG | 0.496818 | 1_2:-46686553 | Msa0073230:intron |
| AAATGGGTACCTCCACTCTC+TGG | 0.501751 | 1_2:-46693779 | Msa0073230:CDS |
| TGGCTGGTAGCTTCAATGGC+TGG | 0.501850 | 1_2:-46687020 | Msa0073230:CDS |
| GAATGAGAAGGTTGACGGCT+CGG | 0.502596 | 1_2:-46692184 | Msa0073230:CDS |
| AATTTGTTGTTGATGGCGAC+TGG | 0.503081 | 1_2:-46686363 | Msa0073230:CDS |
| TTCAGCTGAGCTGAAAGTAA+AGG | 0.503279 | 1_2:-46693835 | Msa0073230:five_prime_UTR |
| AACTCAGAGCCAGAGGTTGT+GGG | 0.505238 | 1_2:+46691598 | None:intergenic |
| GGTGATGTTGTTGAGGTGGC+TGG | 0.506525 | 1_2:-46687036 | Msa0073230:CDS |
| TTATTCGTGGAGGATGGCCT+AGG | 0.508296 | 1_2:-46692042 | Msa0073230:CDS |
| TTCCGCCCCTGTAGAATCCT+CGG | 0.509559 | 1_2:-46692070 | Msa0073230:CDS |
| TCCACAGTGGTCACTTCAGT+TGG | 0.511638 | 1_2:+46691964 | None:intergenic |
| TAAGATGCAATGTAGTATGA+TGG | 0.511848 | 1_2:-46685365 | Msa0073230:three_prime_UTR |
| CATTGTTATCTTCAGGTGGA+TGG | 0.517779 | 1_2:+46690757 | None:intergenic |
| GATTCACCAGAAATTTCTGT+TGG | 0.518420 | 1_2:+46691880 | None:intergenic |
| TTGACAGCAACATGGAAAAG+AGG | 0.519204 | 1_2:-46685782 | Msa0073230:three_prime_UTR |
| AAGGTTGACGGCTCGGATGA+TGG | 0.519792 | 1_2:-46692177 | Msa0073230:CDS |
| CATTATACGAAGTGTTGGAA+TGG | 0.520758 | 1_2:+46691752 | None:intergenic |
| CTGGCATCACCCAATAAAGA+TGG | 0.522059 | 1_2:-46687001 | Msa0073230:CDS |
| TGACAGCAACATGGAAAAGA+GGG | 0.522491 | 1_2:-46685781 | Msa0073230:three_prime_UTR |
| TGGCCACATTCCCTCTACTA+AGG | 0.523289 | 1_2:-46693414 | Msa0073230:CDS |
| TCCATTGACAGTTCCTTCCA+CGG | 0.525012 | 1_2:-46691779 | Msa0073230:CDS |
| TCATTTGAGACAACACGGTA+TGG | 0.525060 | 1_2:-46691856 | Msa0073230:CDS |
| ACATCTTCCACGTATGTGAA+AGG | 0.533520 | 1_2:-46685625 | Msa0073230:three_prime_UTR |
| TGAACTGTTGTAGGGTACAT+AGG | 0.534895 | 1_2:-46685848 | Msa0073230:intron |
| AGGATCATTATACGAAGTGT+TGG | 0.535407 | 1_2:+46691747 | None:intergenic |
| AGAAGTCAACAACGTGGCAG+AGG | 0.537900 | 1_2:-46691998 | Msa0073230:CDS |
| TCAACTTGTCTATGGAGGAA+AGG | 0.538315 | 1_2:-46691507 | Msa0073230:CDS |
| GACAAGTTGAATGAAGTGTC+GGG | 0.539012 | 1_2:+46691520 | None:intergenic |
| GAAAGGTGGAAATGAGTGAG+AGG | 0.539660 | 1_2:+46693654 | None:intergenic |
| GACGAAGTTGGTCTTCCTCA+TGG | 0.541010 | 1_2:-46693434 | Msa0073230:CDS |
| AGAAAATAAACAATTAGGCG+TGG | 0.542565 | 1_2:-46685585 | Msa0073230:three_prime_UTR |
| AATAATTGAAAGACCTTCCG+TGG | 0.543122 | 1_2:+46693381 | None:intergenic |
| GGTCAGAATGAGAAGGTTGA+CGG | 0.549557 | 1_2:-46692189 | Msa0073230:CDS |
| CTTCTCACAAGTTCATTATG+TGG | 0.549567 | 1_2:-46692378 | Msa0073230:CDS |
| GGAGATCTAGATCCAGTTGA+AGG | 0.550006 | 1_2:-46691463 | Msa0073230:intron |
| GCAAAGTAGTATAGTAGTAG+TGG | 0.550251 | 1_2:-46693805 | Msa0073230:five_prime_UTR |
| CTTGTTGAATTCTGTGGCGA+CGG | 0.551688 | 1_2:-46687057 | Msa0073230:CDS |
| CAGTGGTCACTTCAGTTGGA+TGG | 0.552128 | 1_2:+46691968 | None:intergenic |
| TAGATACAGCGATGGTGGCG+TGG | 0.552834 | 1_2:+46685502 | None:intergenic |
| GAAGTCAACAACGTGGCAGA+GGG | 0.553220 | 1_2:-46691997 | Msa0073230:CDS |
| CTGGAGAACAGATCCACAAA+GGG | 0.554459 | 1_2:-46686344 | Msa0073230:CDS |
| ATAGTGGATTGGTGTTGCGT+TGG | 0.555387 | 1_2:+46693684 | None:intergenic |
| ATAACACTAGTTAATGATTG+AGG | 0.555605 | 1_2:+46686976 | None:intergenic |
| GAAAATAAACAATTAGGCGT+GGG | 0.559016 | 1_2:-46685584 | Msa0073230:three_prime_UTR |
| GAGGGAGAGAAATAGTGGAT+TGG | 0.560233 | 1_2:+46693673 | None:intergenic |
| AGACAAGTTGAATGAAGTGT+CGG | 0.561921 | 1_2:+46691519 | None:intergenic |
| AGAAAGTCTTTCAGGACTCA+AGG | 0.562500 | 1_2:-46687595 | Msa0073230:CDS |
| TGACAAGGATTTGGATGCTG+AGG | 0.564953 | 1_2:-46690513 | Msa0073230:intron |
| TTATAGACCATGATGGATCA+AGG | 0.567399 | 1_2:-46686957 | Msa0073230:intron |
| GGCTGGTCCAACTTTCCAGA+TGG | 0.570271 | 1_2:+46690690 | None:intergenic |
| CTGAAAAGGAACCCAGGACA+AGG | 0.571580 | 1_2:+46693853 | None:intergenic |
| CACGAAATGAATTTGTATCA+CGG | 0.573343 | 1_2:+46685394 | None:intergenic |
| CCAAATAGATACAGCGATGG+TGG | 0.577476 | 1_2:+46685497 | None:intergenic |
| AAAGGTGGAAATGAGTGAGA+GGG | 0.577677 | 1_2:+46693655 | None:intergenic |
| AGAAGGAGTTGGAACTGTCT+CGG | 0.579202 | 1_2:-46689030 | Msa0073230:CDS |
| GTGCTAGTACCAGAAGGAGT+TGG | 0.582635 | 1_2:-46689041 | Msa0073230:intron |
| TGAGTTCCCATTATGTGCCA+TGG | 0.584922 | 1_2:+46690734 | None:intergenic |
| CTTAAAAGCTCCTTAGTAGA+GGG | 0.586209 | 1_2:+46693404 | None:intergenic |
| AAGGTGTTACCGTGTGGTTG+TGG | 0.587121 | 1_2:+46693617 | None:intergenic |
| TGTCCATAGAGCAAAAGGAC+TGG | 0.587697 | 1_2:-46691672 | Msa0073230:CDS |
| GGATGCTGCAAATGATATTG+AGG | 0.590010 | 1_2:-46692310 | Msa0073230:CDS |
| ACTAGTGTTATAGACCATGA+TGG | 0.591582 | 1_2:-46686964 | Msa0073230:CDS |
| GTGTTACCGTGTGGTTGTGG+TGG | 0.592717 | 1_2:+46693620 | None:intergenic |
| TTCATTCAACTTGTCTATGG+AGG | 0.594794 | 1_2:-46691512 | Msa0073230:CDS |
| CAAACACTTACCAAAGAGGC+TGG | 0.595729 | 1_2:+46690673 | None:intergenic |
| TGTCTTGCAAACCAAGGCAG+AGG | 0.596959 | 1_2:-46687679 | Msa0073230:CDS |
| ATACCAAACACTTACCAAAG+AGG | 0.597173 | 1_2:+46690669 | None:intergenic |
| AACTAATCCTTTCACATACG+TGG | 0.597521 | 1_2:+46685618 | None:intergenic |
| AAATCATCTCAAGTTCATGC+TGG | 0.600300 | 1_2:-46690385 | Msa0073230:intron |
| ATGGCATTGTTATCTTCAGG+TGG | 0.604132 | 1_2:+46690753 | None:intergenic |
| GTCAGAGCGGATCTCATCAT+CGG | 0.605498 | 1_2:+46693472 | None:intergenic |
| ATTTAAAGGTCAGAATGAGA+AGG | 0.605549 | 1_2:-46692196 | Msa0073230:intron |
| GCTTAAAAGCTCCTTAGTAG+AGG | 0.607264 | 1_2:+46693403 | None:intergenic |
| GCTGAAAGAACAGATTGAGA+AGG | 0.608814 | 1_2:-46689008 | Msa0073230:CDS |
| GATTTAGGTAGTTCAAGCGA+AGG | 0.608993 | 1_2:-46691937 | Msa0073230:CDS |
| CCTAGTGGCATATCAACAGC+AGG | 0.611521 | 1_2:+46690783 | None:intergenic |
| CGACGGTGATGTTGTTGAGG+TGG | 0.612943 | 1_2:-46687040 | Msa0073230:CDS |
| ATCAACTGAATTTCTTCAGG+GGG | 0.613079 | 1_2:-46692145 | Msa0073230:CDS |
| CACATAATGAACTTGTGAGA+AGG | 0.616043 | 1_2:+46692379 | None:intergenic |
| TCTATGGACAAATCAACTGA+TGG | 0.619476 | 1_2:+46691685 | None:intergenic |
| GCTCCTTAGTAGAGGGAATG+TGG | 0.619864 | 1_2:+46693411 | None:intergenic |
| ACCTGGCAAACATTGTCAGA+CGG | 0.622952 | 1_2:-46692425 | Msa0073230:CDS |
| GGATGATCACATGCTACATG+AGG | 0.625741 | 1_2:-46690552 | Msa0073230:CDS |
| CTCAGAAAACTCAGAGCCAG+AGG | 0.625929 | 1_2:+46691591 | None:intergenic |
| CCTGCTGTTGATATGCCACT+AGG | 0.626325 | 1_2:-46690783 | Msa0073230:CDS |
| ATCCGAGGATTCTACAGGGG+CGG | 0.627206 | 1_2:+46692068 | None:intergenic |
| GAAATAACATAGCCAGAGAG+TGG | 0.629639 | 1_2:+46693767 | None:intergenic |
| TTAGGCGTGGGCTGATAGTG+AGG | 0.631300 | 1_2:-46685572 | Msa0073230:three_prime_UTR |
| TGGCGACGGTGATGTTGTTG+AGG | 0.633088 | 1_2:-46687043 | Msa0073230:CDS |
| CAAAGGGAGTCAGTAGCTAG+AGG | 0.634990 | 1_2:-46686328 | Msa0073230:CDS |
| GCAAACATTGTCAGACGGAG+AGG | 0.639169 | 1_2:-46692420 | Msa0073230:CDS |
| CCAAAACCACCACAACCACA+CGG | 0.642179 | 1_2:-46693626 | Msa0073230:intron |
| TCTCCAAATAGATACAGCGA+TGG | 0.642541 | 1_2:+46685494 | None:intergenic |
| AGTGATCTTTGAGTTCACCT+AGG | 0.642551 | 1_2:+46692025 | None:intergenic |
| AAATATCCGAGGATTCTACA+GGG | 0.643478 | 1_2:+46692064 | None:intergenic |
| TTTGTCTGTCTTGCAAACCA+AGG | 0.647837 | 1_2:-46687685 | Msa0073230:CDS |
| TTGTATTTATAGGAATGACC+TGG | 0.649997 | 1_2:-46692442 | Msa0073230:intron |
| AAAATGACTGAGAAGAGGAG+AGG | 0.651561 | 1_2:+46685449 | None:intergenic |
| ACCTGAAGATAACAATGCCA+TGG | 0.653047 | 1_2:-46690751 | Msa0073230:CDS |
| GCTCAGCTGAAAAGGAACCC+AGG | 0.653399 | 1_2:+46693847 | None:intergenic |
| ACGATAAAAGTTAAAACCTG+TGG | 0.655831 | 1_2:+46685525 | None:intergenic |
| TCAGGTGGATGGACACCTAG+TGG | 0.658156 | 1_2:+46690768 | None:intergenic |
| GCACGCACCTCATATACACC+AGG | 0.663325 | 1_2:+46686546 | None:intergenic |
| AAGAAATTCAGTTGATACCG+TGG | 0.664333 | 1_2:+46692152 | None:intergenic |
| GAAGTGCATTCATCTAAACT+CGG | 0.666994 | 1_2:+46692090 | None:intergenic |
| TATTGGGTGCTAGTACCAGA+AGG | 0.670191 | 1_2:-46689047 | Msa0073230:intron |
| ACTGGAGAACAGATCCACAA+AGG | 0.670248 | 1_2:-46686345 | Msa0073230:CDS |
| CTCCACGAATAAAATATCCG+AGG | 0.671089 | 1_2:+46692053 | None:intergenic |
| TCCATAGAGCAAAAGGACTG+GGG | 0.672682 | 1_2:-46691670 | Msa0073230:CDS |
| TATCAACTGAATTTCTTCAG+GGG | 0.673369 | 1_2:-46692146 | Msa0073230:CDS |
| GACAGCAACATGGAAAAGAG+GGG | 0.676424 | 1_2:-46685780 | Msa0073230:three_prime_UTR |
| GTAGAGGGAATGTGGCCATG+AGG | 0.677553 | 1_2:+46693419 | None:intergenic |
| AACTGCTTCACACATCTCTG+TGG | 0.692375 | 1_2:-46693741 | Msa0073230:CDS |
| ACTGCTAGATGTATATAACA+AGG | 0.701193 | 1_2:-46686247 | Msa0073230:intron |
| ATAACATAGCCAGAGAGTGG+AGG | 0.702622 | 1_2:+46693770 | None:intergenic |
| AAGTCTTTCAGGACTCAAGG+AGG | 0.706762 | 1_2:-46687592 | Msa0073230:intron |
| AATCATCATTTGAGACAACA+CGG | 0.711660 | 1_2:-46691861 | Msa0073230:CDS |
| AAGTCAACAACGTGGCAGAG+GGG | 0.721712 | 1_2:-46691996 | Msa0073230:CDS |
| AAAAGATGCAGAGTTGCATG+AGG | 0.730970 | 1_2:-46687622 | Msa0073230:CDS |
| CGGCTCGGATGATGGTACCA+CGG | 0.731376 | 1_2:-46692169 | Msa0073230:CDS |
| AATATCCGAGGATTCTACAG+GGG | 0.732323 | 1_2:+46692065 | None:intergenic |
| ACCTAAATCATTATCCACAG+TGG | 0.733210 | 1_2:+46691951 | None:intergenic |
| GAAATTGACGAATGTCAGAG+CGG | 0.742026 | 1_2:+46693459 | None:intergenic |
| CTCTAAAGAAGTCAACAACG+TGG | 0.748360 | 1_2:-46692004 | Msa0073230:CDS |
| TCCAACTGAAGTGACCACTG+TGG | 0.757560 | 1_2:-46691965 | Msa0073230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAATTAATTCCTAATT+TGG | - | chr1_2:46685627-46685646 | Msa0073230:three_prime_UTR | 10.0% |
| !! | TTATAAAATTTACAGAAATT+CGG | + | chr1_2:46687910-46687929 | None:intergenic | 10.0% |
| !!! | AATGATTCTTTTAAAATATT+CGG | + | chr1_2:46688030-46688049 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAAAAATCCATTT+TGG | + | chr1_2:46689249-46689268 | None:intergenic | 10.0% |
| !!! | AAAATGGATTTTTTTTTTAA+AGG | - | chr1_2:46689248-46689267 | Msa0073230:intron | 10.0% |
| !!! | GGTATTTTAATATTAAATAT+AGG | + | chr1_2:46689727-46689746 | None:intergenic | 10.0% |
| !! | CAAAAAATATACTAAAATAT+AGG | + | chr1_2:46689699-46689718 | None:intergenic | 10.0% |
| !!! | GGTATTTTAATATTAAATAT+AGG | - | chr1_2:46689727-46689746 | Msa0073230:intron | 10.0% |
| !!! | TTAAATTTTACTGTTTTTAA+TGG | - | chr1_2:46690263-46690282 | Msa0073230:intron | 10.0% |
| !!! | TAAAGTGATTTTTTTTTTTT+TGG | - | chr1_2:46692372-46692391 | Msa0073230:CDS | 10.0% |
| !!! | ATTTTTTTTTTTTTGGTTTA+TGG | - | chr1_2:46692379-46692398 | Msa0073230:CDS | 10.0% |
| !! | AAATGAAATTAATCCAAATT+AGG | + | chr1_2:46685643-46685662 | None:intergenic | 15.0% |
| !!! | CAATTTTAAAATTTAAACTC+AGG | + | chr1_2:46685893-46685912 | None:intergenic | 15.0% |
| !!! | TTATAAGTGTTAGAATATTT+TGG | - | chr1_2:46685995-46686014 | Msa0073230:intron | 15.0% |
| !!! | TTTCTTCTTTTAATAAAATC+TGG | - | chr1_2:46686209-46686228 | Msa0073230:intron | 15.0% |
| !! | GAACATATTTAACAAAAAAA+AGG | - | chr1_2:46686426-46686445 | Msa0073230:intron | 15.0% |
| !!! | TAAATTTCATTTTTCCTTTT+AGG | - | chr1_2:46686575-46686594 | Msa0073230:CDS | 15.0% |
| !!! | AAATTTCATTTTTCCTTTTA+GGG | - | chr1_2:46686576-46686595 | Msa0073230:CDS | 15.0% |
| !! | TATTTAACCATTGTATTTAT+AGG | - | chr1_2:46686707-46686726 | Msa0073230:intron | 15.0% |
| !! | AAAAAAAAAGGAAAAAAATG+AGG | - | chr1_2:46687817-46687836 | Msa0073230:intron | 15.0% |
| !!! | GAATATTTTAAAAGAATCAT+TGG | - | chr1_2:46688029-46688048 | Msa0073230:intron | 15.0% |
| !! | TGAAATGAAAAAAAAGTTAA+GGG | + | chr1_2:46688901-46688920 | None:intergenic | 15.0% |
| !! | ATGAAATGAAAAAAAAGTTA+AGG | + | chr1_2:46688902-46688921 | None:intergenic | 15.0% |
| !!! | GTTTTTTATGTTTCATATTT+TGG | + | chr1_2:46689160-46689179 | None:intergenic | 15.0% |
| !! | TATGAAACATAAAAAACTTA+AGG | - | chr1_2:46689163-46689182 | Msa0073230:intron | 15.0% |
| !! | ATGAAACATAAAAAACTTAA+GGG | - | chr1_2:46689164-46689183 | Msa0073230:intron | 15.0% |
| !!! | AGTATATTTTTTGTATAGTA+TGG | - | chr1_2:46689706-46689725 | Msa0073230:intron | 15.0% |
| !! | TATAACTATTCTAAACAAAA+AGG | + | chr1_2:46690033-46690052 | None:intergenic | 15.0% |
| !!! | ATTTAGTATTGTTTTTGTTT+TGG | - | chr1_2:46690718-46690737 | Msa0073230:CDS | 15.0% |
| !!! | TATTAAAATTTGAAATCAGA+TGG | - | chr1_2:46690961-46690980 | Msa0073230:intron | 15.0% |
| !!! | ATTAAAATTTGAAATCAGAT+GGG | - | chr1_2:46690962-46690981 | Msa0073230:intron | 15.0% |
| !!! | ATTTTTTTATCTTTTTGGAT+AGG | + | chr1_2:46692026-46692045 | None:intergenic | 15.0% |
| !!! | TCACTATTTTTTTATCTTTT+TGG | + | chr1_2:46692031-46692050 | None:intergenic | 15.0% |
| !! | TAAATTCAATTAAACATTAG+TGG | + | chr1_2:46692644-46692663 | None:intergenic | 15.0% |
| !! | ATGTTTAATTGAATTTACTT+CGG | - | chr1_2:46692647-46692666 | Msa0073230:intron | 15.0% |
| !!! | AATTTAAATTGATGATTATG+AGG | + | chr1_2:46692960-46692979 | None:intergenic | 15.0% |
| !! | CATCAATTTAAATTAATGTT+TGG | - | chr1_2:46692966-46692985 | Msa0073230:intron | 15.0% |
| !! | CTTCGTTTATAGTTAATTAT+TGG | + | chr1_2:46685599-46685618 | None:intergenic | 20.0% |
| !!! | TTTGGATTAATTTCATTTTC+AGG | - | chr1_2:46685645-46685664 | Msa0073230:three_prime_UTR | 20.0% |
| !!! | TAATTTTTGTACCTACTTTT+CGG | - | chr1_2:46686145-46686164 | Msa0073230:intron | 20.0% |
| !!! | AACTTTTCTTCAAGTAAAAA+CGG | + | chr1_2:46686306-46686325 | None:intergenic | 20.0% |
| !!! | TAATTTGTAGAGACTAAAAA+AGG | - | chr1_2:46686358-46686377 | Msa0073230:CDS | 20.0% |
| !! | AATTTGTAGAGACTAAAAAA+GGG | - | chr1_2:46686359-46686378 | Msa0073230:CDS | 20.0% |
| !!! | CAAAAAAATGTACATTTTGT+AGG | - | chr1_2:46686397-46686416 | Msa0073230:intron | 20.0% |
| !! | GATTAATGACAAACAATTAT+TGG | + | chr1_2:46686482-46686501 | None:intergenic | 20.0% |
| !! | TTAATATTGTGGAAATGAAA+AGG | + | chr1_2:46686542-46686561 | None:intergenic | 20.0% |
| !! | AAAAAGTTTAGATGAAAGAT+CGG | - | chr1_2:46686828-46686847 | Msa0073230:intron | 20.0% |
| !! | CCTTTAAATTGTATTAAAGT+TGG | + | chr1_2:46686952-46686971 | None:intergenic | 20.0% |
| !! | CCAACTTTAATACAATTTAA+AGG | - | chr1_2:46686949-46686968 | Msa0073230:intron | 20.0% |
| !! | TAATAAAGAAAAACAGAACA+CGG | + | chr1_2:46687852-46687871 | None:intergenic | 20.0% |
| !! | TCACAATATCAAACAAATAT+GGG | + | chr1_2:46687884-46687903 | None:intergenic | 20.0% |
| !! | ATCACAATATCAAACAAATA+TGG | + | chr1_2:46687885-46687904 | None:intergenic | 20.0% |
| !!! | AGTTTTATTATGTTTGAATC+TGG | - | chr1_2:46688543-46688562 | Msa0073230:intron | 20.0% |
| !!! | CTGGATTTGAAATATATATA+GGG | - | chr1_2:46688586-46688605 | Msa0073230:intron | 20.0% |
| !! | ATTTAGATATTACGTATTGT+TGG | - | chr1_2:46688822-46688841 | Msa0073230:intron | 20.0% |
| !! | AAACCTAAAAATAACTTTAG+GGG | + | chr1_2:46688869-46688888 | None:intergenic | 20.0% |
| !! | GAAACCTAAAAATAACTTTA+GGG | + | chr1_2:46688870-46688889 | None:intergenic | 20.0% |
| !! | TGAAACCTAAAAATAACTTT+AGG | + | chr1_2:46688871-46688890 | None:intergenic | 20.0% |
| !!! | ATGTGTTTAATGTTACTTAA+GGG | + | chr1_2:46688931-46688950 | None:intergenic | 20.0% |
| !!! | AATGTGTTTAATGTTACTTA+AGG | + | chr1_2:46688932-46688951 | None:intergenic | 20.0% |
| !! | TTAAGTAACATTAAACACAT+TGG | - | chr1_2:46688931-46688950 | Msa0073230:intron | 20.0% |
| !! | GTCTATAATTAGCAATTTAA+TGG | + | chr1_2:46689022-46689041 | None:intergenic | 20.0% |
| !! | AAATGGAACGTAAAAATTTA+AGG | - | chr1_2:46689191-46689210 | Msa0073230:intron | 20.0% |
| !! | AATGGAACGTAAAAATTTAA+GGG | - | chr1_2:46689192-46689211 | Msa0073230:intron | 20.0% |
| !!! | AATTTTACTGTTTTTAATGG+AGG | - | chr1_2:46690266-46690285 | Msa0073230:intron | 20.0% |
| !!! | ATTTTACTGTTTTTAATGGA+GGG | - | chr1_2:46690267-46690286 | Msa0073230:intron | 20.0% |
| !! | TATATATACATCAAGCAAAT+GGG | + | chr1_2:46690329-46690348 | None:intergenic | 20.0% |
| !! | ATATATATACATCAAGCAAA+TGG | + | chr1_2:46690330-46690349 | None:intergenic | 20.0% |
| !! | AAACTGTAGAAAAACAAAAA+AGG | + | chr1_2:46691117-46691136 | None:intergenic | 20.0% |
| !!! | TTTTTCAGATATTAGTTTTC+TGG | + | chr1_2:46691521-46691540 | None:intergenic | 20.0% |
| !!! | AGTATGCATTTTCATATTAA+TGG | - | chr1_2:46691937-46691956 | Msa0073230:CDS | 20.0% |
| !!! | GTATGCATTTTCATATTAAT+GGG | - | chr1_2:46691938-46691957 | Msa0073230:CDS | 20.0% |
| !!! | TTTTCATATTAATGGGTTAT+TGG | - | chr1_2:46691945-46691964 | Msa0073230:CDS | 20.0% |
| !! | AAATTTCAGTTAGTAACTAT+TGG | - | chr1_2:46692285-46692304 | Msa0073230:intron | 20.0% |
| !!! | TTTTTTTTGGTTTATGGTAA+AGG | - | chr1_2:46692385-46692404 | Msa0073230:CDS | 20.0% |
| !!! | TATATGTTGTTCTTTTAAGA+AGG | + | chr1_2:46692488-46692507 | None:intergenic | 20.0% |
| !! | TGTTTAATTGAATTTACTTC+GGG | - | chr1_2:46692648-46692667 | Msa0073230:intron | 20.0% |
| !! | AAAGATTTAATAACAACTTG+TGG | - | chr1_2:46692759-46692778 | Msa0073230:intron | 20.0% |
| !!! | TAGATAAAATTTGTTGTTGA+TGG | - | chr1_2:46692789-46692808 | Msa0073230:intron | 20.0% |
| !!! | TTGAATTTGTTTCTTAAGTT+TGG | - | chr1_2:46693268-46693287 | Msa0073230:intron | 20.0% |
| !!! | TGAATTTGTTTCTTAAGTTT+GGG | - | chr1_2:46693269-46693288 | Msa0073230:intron | 20.0% |
| !! | TTAGGAGAAAATAAACAATT+AGG | - | chr1_2:46693569-46693588 | Msa0073230:intron | 20.0% |
| !! | TGCTTCTAAGAACAATTAAA+CGG | + | chr1_2:46686507-46686526 | None:intergenic | 25.0% |
| ! | ATCATACTTGCTTAATATTG+TGG | + | chr1_2:46686553-46686572 | None:intergenic | 25.0% |
| ! | TTCAGTTCAAAATTTAGCAA+GGG | + | chr1_2:46686606-46686625 | None:intergenic | 25.0% |
| !!! | CAACATTGATTCTTTAGAAA+CGG | - | chr1_2:46686804-46686823 | Msa0073230:intron | 25.0% |
| !!! | AACATTGATTCTTTAGAAAC+GGG | - | chr1_2:46686805-46686824 | Msa0073230:intron | 25.0% |
| !! | GTTGCAAATTTTATTCAGAA+TGG | - | chr1_2:46687675-46687694 | Msa0073230:CDS | 25.0% |
| !! | CAAATTTTCACTTTAATACC+TGG | - | chr1_2:46687988-46688007 | Msa0073230:intron | 25.0% |
| ! | TTTAGTCAAAGTCATTGTAA+TGG | - | chr1_2:46688068-46688087 | Msa0073230:intron | 25.0% |
| !!! | TAAGCAACTTTTCACTTTTT+AGG | - | chr1_2:46688124-46688143 | Msa0073230:intron | 25.0% |
| ! | CATTGAATAAATGATGTATG+TGG | + | chr1_2:46688149-46688168 | None:intergenic | 25.0% |
| ! | GTAAGTGTTTGGTATTATAT+TGG | - | chr1_2:46688498-46688517 | Msa0073230:intron | 25.0% |
| ! | TTTCAAATCCAGGTAAAAAA+GGG | + | chr1_2:46688578-46688597 | None:intergenic | 25.0% |
| ! | ATTTCAAATCCAGGTAAAAA+AGG | + | chr1_2:46688579-46688598 | None:intergenic | 25.0% |
| ! | CCTATATATATTTCAAATCC+AGG | + | chr1_2:46688588-46688607 | None:intergenic | 25.0% |
| !! | CCTGGATTTGAAATATATAT+AGG | - | chr1_2:46688585-46688604 | Msa0073230:intron | 25.0% |
| !! | TTTTACTTATCTCATTATGC+AGG | - | chr1_2:46688723-46688742 | Msa0073230:intron | 25.0% |
| ! | TTTACTTATCTCATTATGCA+GGG | - | chr1_2:46688724-46688743 | Msa0073230:intron | 25.0% |
| !! | TGTGTTTAATGTTACTTAAG+GGG | + | chr1_2:46688930-46688949 | None:intergenic | 25.0% |
| ! | TCTTAACCTTTGTAATGTAA+GGG | + | chr1_2:46688990-46689009 | None:intergenic | 25.0% |
| !! | GTCTCATTTTGTTAACTTAA+GGG | + | chr1_2:46689053-46689072 | None:intergenic | 25.0% |
| !! | TGTCTCATTTTGTTAACTTA+AGG | + | chr1_2:46689054-46689073 | None:intergenic | 25.0% |
| ! | ATTTGTAACTTAAGCCTTAA+GGG | - | chr1_2:46689101-46689120 | Msa0073230:intron | 25.0% |
| ! | AAAAACTTAAGGGATCAAAA+TGG | - | chr1_2:46689174-46689193 | Msa0073230:intron | 25.0% |
| !! | ATTTACAAACGTTGACATTT+TGG | + | chr1_2:46689219-46689238 | None:intergenic | 25.0% |
| ! | ATGTCAACGTTTGTAAATTA+AGG | - | chr1_2:46689221-46689240 | Msa0073230:intron | 25.0% |
| ! | TGTCAACGTTTGTAAATTAA+GGG | - | chr1_2:46689222-46689241 | Msa0073230:intron | 25.0% |
| !!! | GTTATTTTTAAGTTTCACTC+AGG | + | chr1_2:46689275-46689294 | None:intergenic | 25.0% |
| ! | ACTGGGAAATGTTAAAATAT+AGG | - | chr1_2:46689588-46689607 | Msa0073230:intron | 25.0% |
| ! | CTGGGAAATGTTAAAATATA+GGG | - | chr1_2:46689589-46689608 | Msa0073230:intron | 25.0% |
| ! | CTAAAATATAGGGTATAGTA+TGG | + | chr1_2:46689688-46689707 | None:intergenic | 25.0% |
| ! | ACAAGTTAAGAAGCTAAAAA+AGG | + | chr1_2:46689867-46689886 | None:intergenic | 25.0% |
| ! | AAACAGTAAAATTTAACAGC+AGG | + | chr1_2:46690259-46690278 | None:intergenic | 25.0% |
| !!! | TTTTACTGTTTTTAATGGAG+GGG | - | chr1_2:46690268-46690287 | Msa0073230:intron | 25.0% |
| !! | ACTTTGAGTCTTTTATGTTT+AGG | - | chr1_2:46690639-46690658 | Msa0073230:intron | 25.0% |
| !! | TATGTTTAGGATTTGAGAAT+TGG | - | chr1_2:46690652-46690671 | Msa0073230:intron | 25.0% |
| !!! | AGTATTGTTTTTGTTTTGGT+AGG | - | chr1_2:46690722-46690741 | Msa0073230:CDS | 25.0% |
| ! | TAATTCTGTAGGATTGAAAT+GGG | + | chr1_2:46690793-46690812 | None:intergenic | 25.0% |
| ! | TTAATTCTGTAGGATTGAAA+TGG | + | chr1_2:46690794-46690813 | None:intergenic | 25.0% |
| ! | TTCTACTCAATTAATTCTGT+AGG | + | chr1_2:46690804-46690823 | None:intergenic | 25.0% |
| !!! | GTCAATTTTTTAAGCAGTTT+TGG | - | chr1_2:46691640-46691659 | Msa0073230:CDS | 25.0% |
| !!! | TTTTTTAAGCAGTTTTGGAT+AGG | - | chr1_2:46691645-46691664 | Msa0073230:CDS | 25.0% |
| !! | GTTTTACAATCATGAGTTTA+GGG | + | chr1_2:46691721-46691740 | None:intergenic | 25.0% |
| !! | TGTTTTACAATCATGAGTTT+AGG | + | chr1_2:46691722-46691741 | None:intergenic | 25.0% |
| !! | TTTTATCTTTTTGGATAGGA+AGG | + | chr1_2:46692022-46692041 | None:intergenic | 25.0% |
| ! | ATAACACTAGTTAATGATTG+AGG | + | chr1_2:46692186-46692205 | None:intergenic | 25.0% |
| !!! | AGACACTTGTCTTTATTTTA+AGG | - | chr1_2:46692247-46692266 | Msa0073230:intron | 25.0% |
| ! | ATTAACAAGAACAGAATGAT+GGG | + | chr1_2:46692325-46692344 | None:intergenic | 25.0% |
| ! | AATTAACAAGAACAGAATGA+TGG | + | chr1_2:46692326-46692345 | None:intergenic | 25.0% |
| ! | TTATGTTATGCTCGTTTAAA+AGG | - | chr1_2:46692344-46692363 | Msa0073230:CDS | 25.0% |
| !!! | TCGTTTCAATGATTTGTTAT+CGG | - | chr1_2:46692417-46692436 | Msa0073230:CDS | 25.0% |
| ! | TGTTCATTATTATAATACCC+AGG | - | chr1_2:46692554-46692573 | Msa0073230:intron | 25.0% |
| ! | TATATAACAAGGTATGATGA+TGG | - | chr1_2:46692923-46692942 | Msa0073230:intron | 25.0% |
| ! | GAATCATACTAATGATCTTA+AGG | - | chr1_2:46693149-46693168 | Msa0073230:intron | 25.0% |
| ! | ACATGCATTTAAATCAGTTA+GGG | - | chr1_2:46693185-46693204 | Msa0073230:intron | 25.0% |
| !! | GAATTTGTTTCTTAAGTTTG+GGG | - | chr1_2:46693270-46693289 | Msa0073230:intron | 25.0% |
| ! | CAACAGTTCACAATAATATT+AGG | + | chr1_2:46693301-46693320 | None:intergenic | 25.0% |
| ! | ATATTATTGTGAACTGTTGT+AGG | - | chr1_2:46693302-46693321 | Msa0073230:intron | 25.0% |
| ! | TATTATTGTGAACTGTTGTA+GGG | - | chr1_2:46693303-46693322 | Msa0073230:intron | 25.0% |
| ! | TACATAGGAATTGAAGATAA+TGG | - | chr1_2:46693326-46693345 | Msa0073230:intron | 25.0% |
| ! | ATTTAAATGTGCATACTAGA+TGG | + | chr1_2:46693454-46693473 | None:intergenic | 25.0% |
| !!! | GAAAGGATTAGTTTATGATT+AGG | - | chr1_2:46693551-46693570 | Msa0073230:intron | 25.0% |
| !!! | GTTTAGATAGTTTTAGTAAG+AGG | - | chr1_2:46693611-46693630 | Msa0073230:intron | 25.0% |
| TATAGTAGTAGTGGTGTAAA+TGG | - | chr1_2:46685363-46685382 | Msa0073230:three_prime_UTR | 30.0% | |
| ATAGTAGTAGTGGTGTAAAT+GGG | - | chr1_2:46685364-46685383 | Msa0073230:three_prime_UTR | 30.0% | |
| AAAGAAGAAGAAGAAGAAGA+AGG | + | chr1_2:46685564-46685583 | None:intergenic | 30.0% | |
| !!! | AATTTTAAAATTGCGTCTCG+CGG | - | chr1_2:46685900-46685919 | Msa0073230:intron | 30.0% |
| TGAAGAAAAGTTCACTCTTT+AGG | - | chr1_2:46686314-46686333 | Msa0073230:CDS | 30.0% | |
| GAAGAAAAGTTCACTCTTTA+GGG | - | chr1_2:46686315-46686334 | Msa0073230:CDS | 30.0% | |
| TTTAGGGAATAATAGCATGT+AGG | - | chr1_2:46686331-46686350 | Msa0073230:CDS | 30.0% | |
| AGAGATGCTTAACTAACTAA+TGG | + | chr1_2:46686454-46686473 | None:intergenic | 30.0% | |
| TCAGTTCAAAATTTAGCAAG+GGG | + | chr1_2:46686605-46686624 | None:intergenic | 30.0% | |
| GTTCAGTTCAAAATTTAGCA+AGG | + | chr1_2:46686607-46686626 | None:intergenic | 30.0% | |
| ! | TTTTACAAATGACCTCTAGT+AGG | - | chr1_2:46686643-46686662 | Msa0073230:intron | 30.0% |
| TTTACAAATGACCTCTAGTA+GGG | - | chr1_2:46686644-46686663 | Msa0073230:intron | 30.0% | |
| GGTCATTCCTATAAATACAA+TGG | + | chr1_2:46686717-46686736 | None:intergenic | 30.0% | |
| TTGTATTTATAGGAATGACC+TGG | - | chr1_2:46686717-46686736 | Msa0073230:intron | 30.0% | |
| !! | TTCTTAACGCACTATTTTTC+TGG | - | chr1_2:46686902-46686921 | Msa0073230:intron | 30.0% |
| ATTTAAAGGTCAGAATGAGA+AGG | - | chr1_2:46686963-46686982 | Msa0073230:CDS | 30.0% | |
| GTATCAACTGAATTTCTTCA+GGG | - | chr1_2:46687012-46687031 | Msa0073230:CDS | 30.0% | |
| TATCAACTGAATTTCTTCAG+GGG | - | chr1_2:46687013-46687032 | Msa0073230:CDS | 30.0% | |
| ! | AATCATCATTTGAGACAACA+CGG | - | chr1_2:46687298-46687317 | Msa0073230:intron | 30.0% |
| ATATTAGACTTACCTTCAAC+TGG | + | chr1_2:46687711-46687730 | None:intergenic | 30.0% | |
| !! | TGAAAATTTGAGTTGAAGCA+AGG | + | chr1_2:46687978-46687997 | None:intergenic | 30.0% |
| AATCATTGGCAACAAATTCT+TGG | - | chr1_2:46688043-46688062 | Msa0073230:intron | 30.0% | |
| ATCATTGGCAACAAATTCTT+GGG | - | chr1_2:46688044-46688063 | Msa0073230:intron | 30.0% | |
| TCGATTTAGTATACTTTCTC+CGG | - | chr1_2:46688092-46688111 | Msa0073230:intron | 30.0% | |
| AAGTTGCTTATAATTGAGAC+CGG | + | chr1_2:46688114-46688133 | None:intergenic | 30.0% | |
| TGAACCTAAAAAGTGAAAAG+TGG | - | chr1_2:46688206-46688225 | Msa0073230:intron | 30.0% | |
| !!! | TAAGCCACTTTTCACTTTTT+AGG | + | chr1_2:46688213-46688232 | None:intergenic | 30.0% |
| TTCAAATCCAGGTAAAAAAG+GGG | + | chr1_2:46688577-46688596 | None:intergenic | 30.0% | |
| !! | TCCAATTACTCATTTTGACA+AGG | - | chr1_2:46688631-46688650 | Msa0073230:intron | 30.0% |
| TCCTTGTCAAAATGAGTAAT+TGG | + | chr1_2:46688635-46688654 | None:intergenic | 30.0% | |
| !! | TACTCATTTTGACAAGGATT+TGG | - | chr1_2:46688637-46688656 | Msa0073230:intron | 30.0% |
| ! | GTGTTTAATGTTACTTAAGG+GGG | + | chr1_2:46688929-46688948 | None:intergenic | 30.0% |
| GTCTTAACCTTTGTAATGTA+AGG | + | chr1_2:46688991-46689010 | None:intergenic | 30.0% | |
| TTACAAAGGTTAAGACACTT+TGG | - | chr1_2:46688995-46689014 | Msa0073230:intron | 30.0% | |
| ATTGCTAATTATAGACACGT+TGG | - | chr1_2:46689026-46689045 | Msa0073230:CDS | 30.0% | |
| CATTTGTAACTTAAGCCTTA+AGG | - | chr1_2:46689100-46689119 | Msa0073230:intron | 30.0% | |
| TGTAAATTAAGGGACCAAAA+TGG | - | chr1_2:46689232-46689251 | Msa0073230:intron | 30.0% | |
| TTAACATTTCCCAGTATGAA+AGG | + | chr1_2:46689583-46689602 | None:intergenic | 30.0% | |
| GCGGACACTAATATATTTAA+GGG | + | chr1_2:46689915-46689934 | None:intergenic | 30.0% | |
| ! | TTCCTTTTGCAAATGCTATT+GGG | - | chr1_2:46690096-46690115 | Msa0073230:intron | 30.0% |
| TTTACAAAGTTCTCTTGTGA+AGG | + | chr1_2:46690364-46690383 | None:intergenic | 30.0% | |
| TCACAAGAGAACTTTGTAAA+TGG | - | chr1_2:46690364-46690383 | Msa0073230:intron | 30.0% | |
| CTGTCATTAGTCATAATTGA+AGG | + | chr1_2:46690396-46690415 | None:intergenic | 30.0% | |
| ! | TCTTTTCATGTGATTTTGCA+GGG | + | chr1_2:46690482-46690501 | None:intergenic | 30.0% |
| ! | ATCTTTTCATGTGATTTTGC+AGG | + | chr1_2:46690483-46690502 | None:intergenic | 30.0% |
| TTAAAAATGAATTGCAGGCA+AGG | + | chr1_2:46690907-46690926 | None:intergenic | 30.0% | |
| !! | TTGCCTGCAATTCATTTTTA+AGG | - | chr1_2:46690906-46690925 | Msa0073230:intron | 30.0% |
| GATTGCTTAAAGTTTGTATG+AGG | - | chr1_2:46691053-46691072 | Msa0073230:intron | 30.0% | |
| ! | TTTGTATGAGGTTTGATTTC+TGG | - | chr1_2:46691065-46691084 | Msa0073230:intron | 30.0% |
| ! | TTGATTTCTGGACTTAATGT+TGG | - | chr1_2:46691077-46691096 | Msa0073230:intron | 30.0% |
| ! | TGATTTCTGGACTTAATGTT+GGG | - | chr1_2:46691078-46691097 | Msa0073230:intron | 30.0% |
| CTGTAGAAAAACAAAAAAGG+TGG | + | chr1_2:46691114-46691133 | None:intergenic | 30.0% | |
| ! | TCAGATTTTGGACACATATT+TGG | + | chr1_2:46691164-46691183 | None:intergenic | 30.0% |
| TTTGAGCAATAGATTTGATC+GGG | + | chr1_2:46691333-46691352 | None:intergenic | 30.0% | |
| CTTTGAGCAATAGATTTGAT+CGG | + | chr1_2:46691334-46691353 | None:intergenic | 30.0% | |
| ATGCTGAAAACAAAAACATG+TGG | + | chr1_2:46691452-46691471 | None:intergenic | 30.0% | |
| ATTGACAAATGCTAACCATT+AGG | + | chr1_2:46691626-46691645 | None:intergenic | 30.0% | |
| ! | GAATGTTGGTTATGAAATTG+AGG | - | chr1_2:46691667-46691686 | Msa0073230:CDS | 30.0% |
| AATTCTTTCTCTGACAAAAC+TGG | + | chr1_2:46691824-46691843 | None:intergenic | 30.0% | |
| GATCATACATATGCTGTATT+TGG | - | chr1_2:46691975-46691994 | Msa0073230:CDS | 30.0% | |
| ATTGAGGATCCATCTTTATT+GGG | + | chr1_2:46692170-46692189 | None:intergenic | 30.0% | |
| ATCAGTATTATTACTAAGCC+AGG | + | chr1_2:46692528-46692547 | None:intergenic | 30.0% | |
| ACTGCTAGATGTATATAACA+AGG | - | chr1_2:46692912-46692931 | Msa0073230:intron | 30.0% | |
| ! | TTTTGCTAAAAGCTACACTT+TGG | + | chr1_2:46693044-46693063 | None:intergenic | 30.0% |
| GACATGCATTTAAATCAGTT+AGG | - | chr1_2:46693184-46693203 | Msa0073230:intron | 30.0% | |
| ! | CTGACATTAACTAAAAGTGT+CGG | + | chr1_2:46693215-46693234 | None:intergenic | 30.0% |
| AGAAAATAAACAATTAGGCG+TGG | - | chr1_2:46693574-46693593 | Msa0073230:intron | 30.0% | |
| GAAAATAAACAATTAGGCGT+GGG | - | chr1_2:46693575-46693594 | Msa0073230:intron | 30.0% | |
| ACGATAAAAGTTAAAACCTG+TGG | + | chr1_2:46693637-46693656 | None:intergenic | 30.0% | |
| ! | TTTGTGGTTCATTTTCAAAG+TGG | - | chr1_2:46693732-46693751 | Msa0073230:CDS | 30.0% |
| CACGAAATGAATTTGTATCA+CGG | + | chr1_2:46693768-46693787 | None:intergenic | 30.0% | |
| TAAGATGCAATGTAGTATGA+TGG | - | chr1_2:46693794-46693813 | Msa0073230:exon | 30.0% | |
| GCAAAGTAGTATAGTAGTAG+TGG | - | chr1_2:46685354-46685373 | Msa0073230:three_prime_UTR | 35.0% | |
| !! | AGAGAATATGCACTTGTTGT+TGG | + | chr1_2:46685455-46685474 | None:intergenic | 35.0% |
| CTTAAAAGCTCCTTAGTAGA+GGG | + | chr1_2:46685758-46685777 | None:intergenic | 35.0% | |
| AATAATTGAAAGACCTTCCG+TGG | + | chr1_2:46685781-46685800 | None:intergenic | 35.0% | |
| TCTGGTATGTTGCAAATGAT+TGG | - | chr1_2:46686227-46686246 | Msa0073230:intron | 35.0% | |
| CAAATGATTGGTAGAGTTTG+AGG | - | chr1_2:46686239-46686258 | Msa0073230:intron | 35.0% | |
| AATGACTTTCTCTATAGCGA+TGG | - | chr1_2:46686277-46686296 | Msa0073230:exon | 35.0% | |
| TTACAAATGACCTCTAGTAG+GGG | - | chr1_2:46686645-46686664 | Msa0073230:intron | 35.0% | |
| GAGAGGTCATAAAAAGATTC+AGG | - | chr1_2:46686756-46686775 | Msa0073230:intron | 35.0% | |
| CACATAATGAACTTGTGAGA+AGG | + | chr1_2:46686783-46686802 | None:intergenic | 35.0% | |
| CTTCTCACAAGTTCATTATG+TGG | - | chr1_2:46686781-46686800 | Msa0073230:intron | 35.0% | |
| GATATTGAGGTTCTATCAAC+AGG | - | chr1_2:46686862-46686881 | Msa0073230:intron | 35.0% | |
| ! | AAGAAATTCAGTTGATACCG+TGG | + | chr1_2:46687010-46687029 | None:intergenic | 35.0% |
| GGTATCAACTGAATTTCTTC+AGG | - | chr1_2:46687011-46687030 | Msa0073230:CDS | 35.0% | |
| ATCAACTGAATTTCTTCAGG+GGG | - | chr1_2:46687014-46687033 | Msa0073230:CDS | 35.0% | |
| GAAGTGCATTCATCTAAACT+CGG | + | chr1_2:46687072-46687091 | None:intergenic | 35.0% | |
| AAATATCCGAGGATTCTACA+GGG | + | chr1_2:46687098-46687117 | None:intergenic | 35.0% | |
| AAAATATCCGAGGATTCTAC+AGG | + | chr1_2:46687099-46687118 | None:intergenic | 35.0% | |
| ! | ATCCTCGGATATTTTATTCG+TGG | - | chr1_2:46687104-46687123 | Msa0073230:intron | 35.0% |
| ! | GATATTTTATTCGTGGAGGA+TGG | - | chr1_2:46687111-46687130 | Msa0073230:intron | 35.0% |
| ACCACTGTGGATAATGATTT+AGG | - | chr1_2:46687207-46687226 | Msa0073230:intron | 35.0% | |
| ACCTAAATCATTATCCACAG+TGG | + | chr1_2:46687211-46687230 | None:intergenic | 35.0% | |
| GATTCACCAGAAATTTCTGT+TGG | + | chr1_2:46687282-46687301 | None:intergenic | 35.0% | |
| TGACGCTTTAATGGGAAAAA+TGG | - | chr1_2:46687341-46687360 | Msa0073230:intron | 35.0% | |
| GCTTTAATGGGAAAAATGGT+TGG | - | chr1_2:46687345-46687364 | Msa0073230:intron | 35.0% | |
| !! | CATTATACGAAGTGTTGGAA+TGG | + | chr1_2:46687410-46687429 | None:intergenic | 35.0% |
| AGGATCATTATACGAAGTGT+TGG | + | chr1_2:46687415-46687434 | None:intergenic | 35.0% | |
| TTCTCTCTATTGTCAACATC+AGG | + | chr1_2:46687435-46687454 | None:intergenic | 35.0% | |
| TCTATGGACAAATCAACTGA+TGG | + | chr1_2:46687477-46687496 | None:intergenic | 35.0% | |
| ! | TGATTTGTCCATAGAGCAAA+AGG | - | chr1_2:46687482-46687501 | Msa0073230:intron | 35.0% |
| ! | AGACAAGTTGAATGAAGTGT+CGG | + | chr1_2:46687643-46687662 | None:intergenic | 35.0% |
| CACTTCATTCAACTTGTCTA+TGG | - | chr1_2:46687644-46687663 | Msa0073230:CDS | 35.0% | |
| TTCATTCAACTTGTCTATGG+AGG | - | chr1_2:46687647-46687666 | Msa0073230:CDS | 35.0% | |
| !!! | CATTTTCCATCTGTCACTTT+AGG | - | chr1_2:46688265-46688284 | Msa0073230:intron | 35.0% |
| CATTATCCTAAAGTGACAGA+TGG | + | chr1_2:46688274-46688293 | None:intergenic | 35.0% | |
| TATGTCTCTCACATTGCAAA+AGG | - | chr1_2:46688313-46688332 | Msa0073230:intron | 35.0% | |
| TGCAAAAGGAGATGATTCTT+AGG | - | chr1_2:46688327-46688346 | Msa0073230:intron | 35.0% | |
| ATACCAAACACTTACCAAAG+AGG | + | chr1_2:46688493-46688512 | None:intergenic | 35.0% | |
| AAATCATCTCAAGTTCATGC+TGG | - | chr1_2:46688774-46688793 | Msa0073230:intron | 35.0% | |
| !!! | TGGCCCCTAAAGTTATTTTT+AGG | - | chr1_2:46688863-46688882 | Msa0073230:intron | 35.0% |
| TTTGGTCCCTTACATTACAA+AGG | - | chr1_2:46688981-46689000 | Msa0073230:intron | 35.0% | |
| ! | GACACTTTAGTCTTCTCTTT+CGG | + | chr1_2:46689077-46689096 | None:intergenic | 35.0% |
| CGCGGACACTAATATATTTA+AGG | + | chr1_2:46689916-46689935 | None:intergenic | 35.0% | |
| TTGAATCTCTGTTGTCAAAG+CGG | + | chr1_2:46690010-46690029 | None:intergenic | 35.0% | |
| TAGCATTTGCAAAAGGAAGA+GGG | + | chr1_2:46690094-46690113 | None:intergenic | 35.0% | |
| ATAGCATTTGCAAAAGGAAG+AGG | + | chr1_2:46690095-46690114 | None:intergenic | 35.0% | |
| ! | CTTCCTTTTGCAAATGCTAT+TGG | - | chr1_2:46690095-46690114 | Msa0073230:intron | 35.0% |
| AGAACAGATTGAGAAGGAAA+AGG | - | chr1_2:46690157-46690176 | Msa0073230:intron | 35.0% | |
| ! | GTTTTTAATGGAGGGGAAAA+TGG | - | chr1_2:46690275-46690294 | Msa0073230:intron | 35.0% |
| GGTATGACATAAATTTGAGG+AGG | + | chr1_2:46690427-46690446 | None:intergenic | 35.0% | |
| GCAGGTATGACATAAATTTG+AGG | + | chr1_2:46690430-46690449 | None:intergenic | 35.0% | |
| !! | CGATATGATTTTAACGATCC+TGG | - | chr1_2:46690528-46690547 | Msa0073230:CDS | 35.0% |
| ! | TTGGTAGGATCTTTTGATCT+TGG | - | chr1_2:46690737-46690756 | Msa0073230:CDS | 35.0% |
| TAAGATCGCAATCAAGATCA+AGG | + | chr1_2:46690828-46690847 | None:intergenic | 35.0% | |
| ATCTAGCATCAGATCAAAAG+GGG | + | chr1_2:46690870-46690889 | None:intergenic | 35.0% | |
| GATCTAGCATCAGATCAAAA+GGG | + | chr1_2:46690871-46690890 | None:intergenic | 35.0% | |
| CCACCTTAAAAATGAATTGC+AGG | + | chr1_2:46690912-46690931 | None:intergenic | 35.0% | |
| !! | CCTGCAATTCATTTTTAAGG+TGG | - | chr1_2:46690909-46690928 | Msa0073230:intron | 35.0% |
| ! | TTTTGGACACATATTTGGCT+TGG | + | chr1_2:46691159-46691178 | None:intergenic | 35.0% |
| ! | TGCATGATGCTATCAGATTT+TGG | + | chr1_2:46691176-46691195 | None:intergenic | 35.0% |
| CGATCAAATCTATTGCTCAA+AGG | - | chr1_2:46691332-46691351 | Msa0073230:intron | 35.0% | |
| CAAATCTATTGCTCAAAGGA+AGG | - | chr1_2:46691336-46691355 | Msa0073230:intron | 35.0% | |
| TCATACATTACACAGAAGGA+CGG | + | chr1_2:46691404-46691423 | None:intergenic | 35.0% | |
| ACTCTCATACATTACACAGA+AGG | + | chr1_2:46691408-46691427 | None:intergenic | 35.0% | |
| ! | CTTGCATTTTCTTGTCCTAA+TGG | - | chr1_2:46691608-46691627 | Msa0073230:CDS | 35.0% |
| ! | TGTTGGTTATGAAATTGAGG+AGG | - | chr1_2:46691670-46691689 | Msa0073230:CDS | 35.0% |
| CTATCACAATGAGGTTTAGA+GGG | + | chr1_2:46691916-46691935 | None:intergenic | 35.0% | |
| TCTATCACAATGAGGTTTAG+AGG | + | chr1_2:46691917-46691936 | None:intergenic | 35.0% | |
| TGCATACTTCTATCACAATG+AGG | + | chr1_2:46691925-46691944 | None:intergenic | 35.0% | |
| AACAAGAACCTGGAAATACA+AGG | + | chr1_2:46692088-46692107 | None:intergenic | 35.0% | |
| GATTGAGGATCCATCTTTAT+TGG | + | chr1_2:46692171-46692190 | None:intergenic | 35.0% | |
| ACTAGTGTTATAGACCATGA+TGG | - | chr1_2:46692195-46692214 | Msa0073230:intron | 35.0% | |
| !! | TTATAGACCATGATGGATCA+AGG | - | chr1_2:46692202-46692221 | Msa0073230:intron | 35.0% |
| ! | TTTAGAACCTTGATCCATCA+TGG | + | chr1_2:46692212-46692231 | None:intergenic | 35.0% |
| TTGTTATCGGAATAAGCCTA+TGG | - | chr1_2:46692430-46692449 | Msa0073230:CDS | 35.0% | |
| ! | TACCCAGGAAATCAAGATTT+TGG | - | chr1_2:46692569-46692588 | Msa0073230:intron | 35.0% |
| GACCAAAATCTTGATTTCCT+GGG | + | chr1_2:46692574-46692593 | None:intergenic | 35.0% | |
| AGACCAAAATCTTGATTTCC+TGG | + | chr1_2:46692575-46692594 | None:intergenic | 35.0% | |
| !! | GAAATCAAGATTTTGGTCTG+CGG | - | chr1_2:46692576-46692595 | Msa0073230:intron | 35.0% |
| GATACAGTTGCAATTCGTTT+AGG | - | chr1_2:46692670-46692689 | Msa0073230:intron | 35.0% | |
| AGTAGATAGATGATGCATTC+TGG | - | chr1_2:46692878-46692897 | Msa0073230:intron | 35.0% | |
| ! | TTGATGATTATGAGGCAATG+TGG | + | chr1_2:46692952-46692971 | None:intergenic | 35.0% |
| TCAGTTTGACACAAACACTA+TGG | - | chr1_2:46692997-46693016 | Msa0073230:intron | 35.0% | |
| ! | TGTTACTTCCAGAATATACC+CGG | + | chr1_2:46693129-46693148 | None:intergenic | 35.0% |
| !! | TGTCAATTTTGACAGCAACA+TGG | - | chr1_2:46693369-46693388 | Msa0073230:intron | 35.0% |
| AACTAATCCTTTCACATACG+TGG | + | chr1_2:46693544-46693563 | None:intergenic | 35.0% | |
| CACAAAAAATGACTGAGAAG+AGG | + | chr1_2:46693718-46693737 | None:intergenic | 35.0% | |
| !!! | CTCTTCTCAGTCATTTTTTG+TGG | - | chr1_2:46693716-46693735 | Msa0073230:CDS | 35.0% |
| TACTTTCAGCTCAGCTGAAA+AGG | + | chr1_2:46685323-46685342 | None:intergenic | 40.0% | |
| TTCAGCTGAGCTGAAAGTAA+AGG | - | chr1_2:46685324-46685343 | Msa0073230:three_prime_UTR | 40.0% | |
| GAAATAACATAGCCAGAGAG+TGG | + | chr1_2:46685395-46685414 | None:intergenic | 40.0% | |
| AGAGATGTGTGAAGCAGTTT+GGG | + | chr1_2:46685417-46685436 | None:intergenic | 40.0% | |
| !! | TATGCACTTGTTGTTGGTGT+TGG | + | chr1_2:46685449-46685468 | None:intergenic | 40.0% |
| AAAGGTGGAAATGAGTGAGA+GGG | + | chr1_2:46685507-46685526 | None:intergenic | 40.0% | |
| !! | TCATTTTCAGGAGAAGTCGA+AGG | - | chr1_2:46685657-46685676 | Msa0073230:three_prime_UTR | 40.0% |
| GAAATTGACGAATGTCAGAG+CGG | + | chr1_2:46685703-46685722 | None:intergenic | 40.0% | |
| GCTTAAAAGCTCCTTAGTAG+AGG | + | chr1_2:46685759-46685778 | None:intergenic | 40.0% | |
| ! | ACTAAGGAGCTTTTAAGCCA+CGG | - | chr1_2:46685761-46685780 | Msa0073230:three_prime_UTR | 40.0% |
| !!! | GCATGCAATTTTGCCACTTT+AGG | + | chr1_2:46686173-46686192 | None:intergenic | 40.0% |
| AGTGGCAAAATTGCATGCTT+TGG | - | chr1_2:46686175-46686194 | Msa0073230:intron | 40.0% | |
| TACAAATGACCTCTAGTAGG+GGG | - | chr1_2:46686646-46686665 | Msa0073230:intron | 40.0% | |
| GGATGCTGCAAATGATATTG+AGG | - | chr1_2:46686849-46686868 | Msa0073230:intron | 40.0% | |
| AATATCCGAGGATTCTACAG+GGG | + | chr1_2:46687097-46687116 | None:intergenic | 40.0% | |
| CTCCACGAATAAAATATCCG+AGG | + | chr1_2:46687109-46687128 | None:intergenic | 40.0% | |
| ! | CTCGGATATTTTATTCGTGG+AGG | - | chr1_2:46687107-46687126 | Msa0073230:intron | 40.0% |
| ! | AGTGATCTTTGAGTTCACCT+AGG | + | chr1_2:46687137-46687156 | None:intergenic | 40.0% |
| ! | CTCTAAAGAAGTCAACAACG+TGG | - | chr1_2:46687155-46687174 | Msa0073230:intron | 40.0% |
| GATTTAGGTAGTTCAAGCGA+AGG | - | chr1_2:46687222-46687241 | Msa0073230:intron | 40.0% | |
| GAACTTTGGCTATCGAAGTT+CGG | + | chr1_2:46687255-46687274 | None:intergenic | 40.0% | |
| TTTCTGTTGGCATGGAACTT+TGG | + | chr1_2:46687269-46687288 | None:intergenic | 40.0% | |
| TCCATGCCAACAGAAATTTC+TGG | - | chr1_2:46687273-46687292 | Msa0073230:intron | 40.0% | |
| ACCAGAAATTTCTGTTGGCA+TGG | + | chr1_2:46687277-46687296 | None:intergenic | 40.0% | |
| ! | TCATTTGAGACAACACGGTA+TGG | - | chr1_2:46687303-46687322 | Msa0073230:intron | 40.0% |
| AGAATGCGATGACGCTTTAA+TGG | - | chr1_2:46687332-46687351 | Msa0073230:intron | 40.0% | |
| GAATGCGATGACGCTTTAAT+GGG | - | chr1_2:46687333-46687352 | Msa0073230:intron | 40.0% | |
| AGAGAAAGAGTTCAGTCGTT+TGG | - | chr1_2:46687449-46687468 | Msa0073230:intron | 40.0% | |
| ! | GACAAGTTGAATGAAGTGTC+GGG | + | chr1_2:46687642-46687661 | None:intergenic | 40.0% |
| TCAACTTGTCTATGGAGGAA+AGG | - | chr1_2:46687652-46687671 | Msa0073230:CDS | 40.0% | |
| CAACTTGTCTATGGAGGAAA+GGG | - | chr1_2:46687653-46687672 | Msa0073230:CDS | 40.0% | |
| AGGCATTCATCACAACGATA+TGG | + | chr1_2:46687740-46687759 | None:intergenic | 40.0% | |
| ! | TTCAACTGTCAAAGGCATAG+TGG | + | chr1_2:46687764-46687783 | None:intergenic | 40.0% |
| TCACAAGCTTCAACTGTCAA+AGG | + | chr1_2:46687772-46687791 | None:intergenic | 40.0% | |
| CAAACAAATATGGGACTGAC+AGG | + | chr1_2:46687875-46687894 | None:intergenic | 40.0% | |
| TGGCTTATAATTGAGACCAG+AGG | - | chr1_2:46688226-46688245 | Msa0073230:intron | 40.0% | |
| GGCTTATAATTGAGACCAGA+GGG | - | chr1_2:46688227-46688246 | Msa0073230:intron | 40.0% | |
| ! | ACCAGAGGGAATGCATTTTA+TGG | - | chr1_2:46688241-46688260 | Msa0073230:intron | 40.0% |
| TCCATAAAATGCATTCCCTC+TGG | + | chr1_2:46688245-46688264 | None:intergenic | 40.0% | |
| CATTGTTATCTTCAGGTGGA+TGG | + | chr1_2:46688405-46688424 | None:intergenic | 40.0% | |
| ATGGCATTGTTATCTTCAGG+TGG | + | chr1_2:46688409-46688428 | None:intergenic | 40.0% | |
| ACCTGAAGATAACAATGCCA+TGG | - | chr1_2:46688408-46688427 | Msa0073230:intron | 40.0% | |
| AACAATGCCATGGCACATAA+TGG | - | chr1_2:46688418-46688437 | Msa0073230:intron | 40.0% | |
| ACAATGCCATGGCACATAAT+GGG | - | chr1_2:46688419-46688438 | Msa0073230:intron | 40.0% | |
| ! | TCCAATCAAGTTGTTCCATC+TGG | - | chr1_2:46688454-46688473 | Msa0073230:intron | 40.0% |
| TCCAGATGGAACAACTTGAT+TGG | + | chr1_2:46688458-46688477 | None:intergenic | 40.0% | |
| AGTTGTTCCATCTGGAAAGT+TGG | - | chr1_2:46688462-46688481 | Msa0073230:intron | 40.0% | |
| ! | GGCTGACTAAATTACGCTTT+TGG | - | chr1_2:46688843-46688862 | Msa0073230:intron | 40.0% |
| GTAACTTAAGCCTTAAGGGA+CGG | - | chr1_2:46689105-46689124 | Msa0073230:intron | 40.0% | |
| CAACCCTCTGTTGTTAATAG+CGG | - | chr1_2:46689317-46689336 | Msa0073230:intron | 40.0% | |
| !! | CTTCTTAACTTGTGCCCTAA+GGG | - | chr1_2:46689874-46689893 | Msa0073230:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr1_2:46689891-46689910 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr1_2:46689892-46689911 | None:intergenic | 40.0% |
| CACCCAATAGCATTTGCAAA+AGG | + | chr1_2:46690101-46690120 | None:intergenic | 40.0% | |
| GCTGAAAGAACAGATTGAGA+AGG | - | chr1_2:46690151-46690170 | Msa0073230:intron | 40.0% | |
| ! | TATGCGTAAGCTTTGTGACT+AGG | - | chr1_2:46690563-46690582 | Msa0073230:intron | 40.0% |
| GGATCTAGCATCAGATCAAA+AGG | + | chr1_2:46690872-46690891 | None:intergenic | 40.0% | |
| AAATCAGATGGGTAATCGCT+TGG | - | chr1_2:46690973-46690992 | Msa0073230:intron | 40.0% | |
| ! | GTAATCGCTTGGTCTTCTAA+AGG | - | chr1_2:46690984-46691003 | Msa0073230:intron | 40.0% |
| ATACATTACACAGAAGGACG+GGG | + | chr1_2:46691402-46691421 | None:intergenic | 40.0% | |
| CATACATTACACAGAAGGAC+GGG | + | chr1_2:46691403-46691422 | None:intergenic | 40.0% | |
| TTTGTCTGTCTTGCAAACCA+AGG | - | chr1_2:46691474-46691493 | Msa0073230:CDS | 40.0% | |
| AAAAGATGCAGAGTTGCATG+AGG | - | chr1_2:46691537-46691556 | Msa0073230:CDS | 40.0% | |
| AGAAAGTCTTTCAGGACTCA+AGG | - | chr1_2:46691564-46691583 | Msa0073230:CDS | 40.0% | |
| CTCAAGGAGGTAATGCATTT+AGG | - | chr1_2:46691580-46691599 | Msa0073230:CDS | 40.0% | |
| AAGGAGGTAATGCATTTAGG+AGG | - | chr1_2:46691583-46691602 | Msa0073230:CDS | 40.0% | |
| !!! | GCAGTTTTGGATAGGAATGT+TGG | - | chr1_2:46691653-46691672 | Msa0073230:CDS | 40.0% |
| ATGAGTTTAGGGACTGTATG+TGG | + | chr1_2:46691710-46691729 | None:intergenic | 40.0% | |
| ! | GACAGCGCTCCTTTAAATTT+TGG | - | chr1_2:46691886-46691905 | Msa0073230:CDS | 40.0% |
| !! | GAGGGAGTGCCAAAATTTAA+AGG | + | chr1_2:46691898-46691917 | None:intergenic | 40.0% |
| ACTGTGTTCCTTGTATTTCC+AGG | - | chr1_2:46692077-46692096 | Msa0073230:CDS | 40.0% | |
| CACAGAATTCAACAAGAACC+TGG | + | chr1_2:46692098-46692117 | None:intergenic | 40.0% | |
| CAGGTTCTTGTTGAATTCTG+TGG | - | chr1_2:46692096-46692115 | Msa0073230:CDS | 40.0% | |
| CTCTCTATCACATATGCCAT+AGG | + | chr1_2:46692449-46692468 | None:intergenic | 40.0% | |
| AAGATTCGCAAGAATTGACC+TGG | - | chr1_2:46692507-46692526 | Msa0073230:intron | 40.0% | |
| GCTTTATCCTGGTGTATATG+AGG | - | chr1_2:46692606-46692625 | Msa0073230:intron | 40.0% | |
| !! | AATTTGTTGTTGATGGCGAC+TGG | - | chr1_2:46692796-46692815 | Msa0073230:intron | 40.0% |
| !! | TAGATGATGCATTCTGGTTC+AGG | - | chr1_2:46692884-46692903 | Msa0073230:intron | 40.0% |
| ! | AGCTTTTAGCAAAACCACAG+TGG | - | chr1_2:46693050-46693069 | Msa0073230:intron | 40.0% |
| TGGTGAATTTGGCAGAATCA+CGG | + | chr1_2:46693080-46693099 | None:intergenic | 40.0% | |
| GTTTGGATAGGTGGTGAATT+TGG | + | chr1_2:46693091-46693110 | None:intergenic | 40.0% | |
| CATTTAGTGCAGGTTTGGAT+AGG | + | chr1_2:46693103-46693122 | None:intergenic | 40.0% | |
| AAACCTGCACTAAATGTTCC+CGG | - | chr1_2:46693107-46693126 | Msa0073230:intron | 40.0% | |
| AAATGTTCCCGGGTATATTC+TGG | - | chr1_2:46693118-46693137 | Msa0073230:intron | 40.0% | |
| GTTACTTCCAGAATATACCC+GGG | + | chr1_2:46693128-46693147 | None:intergenic | 40.0% | |
| TGAACTGTTGTAGGGTACAT+AGG | - | chr1_2:46693311-46693330 | Msa0073230:intron | 40.0% | |
| TTGACAGCAACATGGAAAAG+AGG | - | chr1_2:46693377-46693396 | Msa0073230:intron | 40.0% | |
| TGACAGCAACATGGAAAAGA+GGG | - | chr1_2:46693378-46693397 | Msa0073230:intron | 40.0% | |
| ACATCTTCCACGTATGTGAA+AGG | - | chr1_2:46693534-46693553 | Msa0073230:intron | 40.0% | |
| !!! | TAGTTTTAGTAAGAGGCCAC+AGG | - | chr1_2:46693618-46693637 | Msa0073230:intron | 40.0% |
| TCTCCAAATAGATACAGCGA+TGG | + | chr1_2:46693668-46693687 | None:intergenic | 40.0% | |
| GGAGAAAACGATTGCTTCAT+TGG | - | chr1_2:46693683-46693702 | Msa0073230:CDS | 40.0% | |
| AAAATGACTGAGAAGAGGAG+AGG | + | chr1_2:46693713-46693732 | None:intergenic | 40.0% | |
| ! | CATTTTCAAAGTGGCTCACA+AGG | - | chr1_2:46693741-46693760 | Msa0073230:CDS | 40.0% |
| ATAACATAGCCAGAGAGTGG+AGG | + | chr1_2:46685392-46685411 | None:intergenic | 45.0% | |
| CAGAGATGTGTGAAGCAGTT+TGG | + | chr1_2:46685418-46685437 | None:intergenic | 45.0% | |
| AACTGCTTCACACATCTCTG+TGG | - | chr1_2:46685418-46685437 | Msa0073230:three_prime_UTR | 45.0% | |
| !! | ATAGTGGATTGGTGTTGCGT+TGG | + | chr1_2:46685478-46685497 | None:intergenic | 45.0% |
| !! | GAGGGAGAGAAATAGTGGAT+TGG | + | chr1_2:46685489-46685508 | None:intergenic | 45.0% |
| AGTGAGAGGGAGAGAAATAG+TGG | + | chr1_2:46685494-46685513 | None:intergenic | 45.0% | |
| GAAAGGTGGAAATGAGTGAG+AGG | + | chr1_2:46685508-46685527 | None:intergenic | 45.0% | |
| !! | AAGAAGAAGGTGTTACCGTG+TGG | + | chr1_2:46685551-46685570 | None:intergenic | 45.0% |
| CGTCAATTTCTCGACGAAGT+TGG | - | chr1_2:46685713-46685732 | Msa0073230:three_prime_UTR | 45.0% | |
| !! | CACTTTAGGCACCGAAAAGT+AGG | + | chr1_2:46686159-46686178 | None:intergenic | 45.0% |
| !!! | CTACTTTTCGGTGCCTAAAG+TGG | - | chr1_2:46686157-46686176 | Msa0073230:intron | 45.0% |
| TTGCATGCTTTGGTCACTCT+AGG | - | chr1_2:46686185-46686204 | Msa0073230:intron | 45.0% | |
| ACACATAATCCCCCTACTAG+AGG | + | chr1_2:46686658-46686677 | None:intergenic | 45.0% | |
| ACCTGGCAAACATTGTCAGA+CGG | - | chr1_2:46686734-46686753 | Msa0073230:intron | 45.0% | |
| GGTCAGAATGAGAAGGTTGA+CGG | - | chr1_2:46686970-46686989 | Msa0073230:CDS | 45.0% | |
| TCCATTGACAGTTCCTTCCA+CGG | - | chr1_2:46687380-46687399 | Msa0073230:intron | 45.0% | |
| ! | TTGGAATGGTTTTCCGTGGA+AGG | + | chr1_2:46687396-46687415 | None:intergenic | 45.0% |
| !! | AGTGTTGGAATGGTTTTCCG+TGG | + | chr1_2:46687400-46687419 | None:intergenic | 45.0% |
| TGTCCATAGAGCAAAAGGAC+TGG | - | chr1_2:46687487-46687506 | Msa0073230:intron | 45.0% | |
| GTCCATAGAGCAAAAGGACT+GGG | - | chr1_2:46687488-46687507 | Msa0073230:intron | 45.0% | |
| TCCATAGAGCAAAAGGACTG+GGG | - | chr1_2:46687489-46687508 | Msa0073230:intron | 45.0% | |
| GGAGATCTAGATCCAGTTGA+AGG | - | chr1_2:46687696-46687715 | Msa0073230:intron | 45.0% | |
| ! | ACTGTCAAAGGCATAGTGGT+AGG | + | chr1_2:46687760-46687779 | None:intergenic | 45.0% |
| GGAAACTAGACAAGCTAACC+AGG | + | chr1_2:46688009-46688028 | None:intergenic | 45.0% | |
| GCCATGGCATTGTTATCTTC+AGG | + | chr1_2:46688412-46688431 | None:intergenic | 45.0% | |
| TGAGTTCCCATTATGTGCCA+TGG | + | chr1_2:46688428-46688447 | None:intergenic | 45.0% | |
| CAAACACTTACCAAAGAGGC+TGG | + | chr1_2:46688489-46688508 | None:intergenic | 45.0% | |
| CAGCCTCTTTGGTAAGTGTT+TGG | - | chr1_2:46688487-46688506 | Msa0073230:intron | 45.0% | |
| !!! | CTGAGATCCCCTTTTTTACC+TGG | - | chr1_2:46688567-46688586 | Msa0073230:intron | 45.0% |
| GGATGATCACATGCTACATG+AGG | - | chr1_2:46688607-46688626 | Msa0073230:intron | 45.0% | |
| TGACAAGGATTTGGATGCTG+AGG | - | chr1_2:46688646-46688665 | Msa0073230:intron | 45.0% | |
| TAAGACACTTCCGTCCCTTA+AGG | + | chr1_2:46689118-46689137 | None:intergenic | 45.0% | |
| !! | GCTTCTTAACTTGTGCCCTA+AGG | - | chr1_2:46689873-46689892 | Msa0073230:intron | 45.0% |
| CTGTTGTCAAAGCGGAAAAG+CGG | + | chr1_2:46690002-46690021 | None:intergenic | 45.0% | |
| TATTGGGTGCTAGTACCAGA+AGG | - | chr1_2:46690112-46690131 | Msa0073230:intron | 45.0% | |
| AGAAGGAGTTGGAACTGTCT+CGG | - | chr1_2:46690129-46690148 | Msa0073230:intron | 45.0% | |
| GAAGCATAAACAACGCTTGC+AGG | + | chr1_2:46690448-46690467 | None:intergenic | 45.0% | |
| CGCATAAACAACTCAAAGCC+AGG | + | chr1_2:46690549-46690568 | None:intergenic | 45.0% | |
| GAGGCTGAAGAAAGTCTTTC+AGG | - | chr1_2:46691556-46691575 | Msa0073230:CDS | 45.0% | |
| AAGTCTTTCAGGACTCAAGG+AGG | - | chr1_2:46691567-46691586 | Msa0073230:CDS | 45.0% | |
| CACCAGAATCCTGCCTTTAT+GGG | - | chr1_2:46691767-46691786 | Msa0073230:CDS | 45.0% | |
| ACCAGAATCCTGCCTTTATG+GGG | - | chr1_2:46691768-46691787 | Msa0073230:CDS | 45.0% | |
| CTAAAGACACAGCCCCATAA+AGG | + | chr1_2:46691783-46691802 | None:intergenic | 45.0% | |
| CTTGTTGAATTCTGTGGCGA+CGG | - | chr1_2:46692102-46692121 | Msa0073230:CDS | 45.0% | |
| CTGGCATCACCCAATAAAGA+TGG | - | chr1_2:46692158-46692177 | Msa0073230:CDS | 45.0% | |
| ACTGGAGAACAGATCCACAA+AGG | - | chr1_2:46692814-46692833 | Msa0073230:intron | 45.0% | |
| CTGGAGAACAGATCCACAAA+GGG | - | chr1_2:46692815-46692834 | Msa0073230:intron | 45.0% | |
| TTAGTGCAGGTTTGGATAGG+TGG | + | chr1_2:46693100-46693119 | None:intergenic | 45.0% | |
| GGGAACATTTAGTGCAGGTT+TGG | + | chr1_2:46693108-46693127 | None:intergenic | 45.0% | |
| AACCTGCACTAAATGTTCCC+GGG | - | chr1_2:46693108-46693127 | Msa0073230:intron | 45.0% | |
| GACAGCAACATGGAAAAGAG+GGG | - | chr1_2:46693379-46693398 | Msa0073230:intron | 45.0% | |
| CCAAATAGATACAGCGATGG+TGG | + | chr1_2:46693665-46693684 | None:intergenic | 45.0% | |
| CCACCATCGCTGTATCTATT+TGG | - | chr1_2:46693662-46693681 | Msa0073230:CDS | 45.0% | |
| !! | ATATTAAGTAAAAAAAAAAA+AGG | - | chr1_2:46687805-46687824 | Msa0073230:intron | 5.0% |
| !! | TAAAATGAAAAAAAAAATAT+AGG | + | chr1_2:46688960-46688979 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTCATTTTATTT+TGG | - | chr1_2:46688963-46688982 | Msa0073230:intron | 5.0% |
| !!! | GTATTTTAATATTAAATATA+GGG | + | chr1_2:46689728-46689747 | None:intergenic | 5.0% |
| !! | AAAAAATATACTAAAATATA+GGG | + | chr1_2:46689698-46689717 | None:intergenic | 5.0% |
| CTGAAAAGGAACCCAGGACA+AGG | + | chr1_2:46685309-46685328 | None:intergenic | 50.0% | |
| AAATGGGTACCTCCACTCTC+TGG | - | chr1_2:46685380-46685399 | Msa0073230:three_prime_UTR | 50.0% | |
| !!! | TGGTTTTGGAAGCGGAAAGG+TGG | + | chr1_2:46685522-46685541 | None:intergenic | 50.0% |
| !!! | TGGTGGTTTTGGAAGCGGAA+AGG | + | chr1_2:46685525-46685544 | None:intergenic | 50.0% |
| !!! | GGTTGTGGTGGTTTTGGAAG+CGG | + | chr1_2:46685530-46685549 | None:intergenic | 50.0% |
| CCAAAACCACCACAACCACA+CGG | - | chr1_2:46685533-46685552 | Msa0073230:three_prime_UTR | 50.0% | |
| ! | AAGGTGTTACCGTGTGGTTG+TGG | + | chr1_2:46685545-46685564 | None:intergenic | 50.0% |
| GTCAGAGCGGATCTCATCAT+CGG | + | chr1_2:46685690-46685709 | None:intergenic | 50.0% | |
| !! | GACGAAGTTGGTCTTCCTCA+TGG | - | chr1_2:46685725-46685744 | Msa0073230:three_prime_UTR | 50.0% |
| TGGCCACATTCCCTCTACTA+AGG | - | chr1_2:46685745-46685764 | Msa0073230:three_prime_UTR | 50.0% | |
| GCTCCTTAGTAGAGGGAATG+TGG | + | chr1_2:46685751-46685770 | None:intergenic | 50.0% | |
| ! | AGGAGCTTTTAAGCCACGGA+AGG | - | chr1_2:46685765-46685784 | Msa0073230:three_prime_UTR | 50.0% |
| TTGCGTCTCGCGGTAACTAA+AGG | - | chr1_2:46685910-46685929 | Msa0073230:intron | 50.0% | |
| TAGCAAGGGGACTCCCTAAA+AGG | + | chr1_2:46686592-46686611 | None:intergenic | 50.0% | |
| TCCGTCTGACAATGTTTGCC+AGG | + | chr1_2:46686738-46686757 | None:intergenic | 50.0% | |
| GCAAACATTGTCAGACGGAG+AGG | - | chr1_2:46686739-46686758 | Msa0073230:intron | 50.0% | |
| GAATGAGAAGGTTGACGGCT+CGG | - | chr1_2:46686975-46686994 | Msa0073230:CDS | 50.0% | |
| TTTCTTCAGGGGGACAGTTC+TGG | - | chr1_2:46687024-46687043 | Msa0073230:CDS | 50.0% | |
| TTATTCGTGGAGGATGGCCT+AGG | - | chr1_2:46687117-46687136 | Msa0073230:intron | 50.0% | |
| AGAAGTCAACAACGTGGCAG+AGG | - | chr1_2:46687161-46687180 | Msa0073230:intron | 50.0% | |
| GAAGTCAACAACGTGGCAGA+GGG | - | chr1_2:46687162-46687181 | Msa0073230:intron | 50.0% | |
| AAGTCAACAACGTGGCAGAG+GGG | - | chr1_2:46687163-46687182 | Msa0073230:intron | 50.0% | |
| CAGTGGTCACTTCAGTTGGA+TGG | + | chr1_2:46687194-46687213 | None:intergenic | 50.0% | |
| TCCAACTGAAGTGACCACTG+TGG | - | chr1_2:46687194-46687213 | Msa0073230:intron | 50.0% | |
| TCCACAGTGGTCACTTCAGT+TGG | + | chr1_2:46687198-46687217 | None:intergenic | 50.0% | |
| TCCGTGGAAGGAACTGTCAA+TGG | + | chr1_2:46687384-46687403 | None:intergenic | 50.0% | |
| ! | ACCCCAGTCCTTTTGCTCTA+TGG | + | chr1_2:46687493-46687512 | None:intergenic | 50.0% |
| GATGATGTTCCCACAACCTC+TGG | - | chr1_2:46687552-46687571 | Msa0073230:intron | 50.0% | |
| AACTCAGAGCCAGAGGTTGT+GGG | + | chr1_2:46687564-46687583 | None:intergenic | 50.0% | |
| AAACTCAGAGCCAGAGGTTG+TGG | + | chr1_2:46687565-46687584 | None:intergenic | 50.0% | |
| CTCAGAAAACTCAGAGCCAG+AGG | + | chr1_2:46687571-46687590 | None:intergenic | 50.0% | |
| CCTAGTGGCATATCAACAGC+AGG | + | chr1_2:46688379-46688398 | None:intergenic | 50.0% | |
| CCTGCTGTTGATATGCCACT+AGG | - | chr1_2:46688376-46688395 | Msa0073230:intron | 50.0% | |
| GAAAGTTGGACCAGCCTCTT+TGG | - | chr1_2:46688476-46688495 | Msa0073230:intron | 50.0% | |
| CGGCCGCTATTAACAACAGA+GGG | + | chr1_2:46689323-46689342 | None:intergenic | 50.0% | |
| !!! | GTAGGCTGTTTTTTGCCGCT+CGG | + | chr1_2:46689348-46689367 | None:intergenic | 50.0% |
| AGGGAAAAGCGGGTCAATAG+CGG | - | chr1_2:46689397-46689416 | Msa0073230:intron | 50.0% | |
| !!! | GGTCAAAGCGCCGCTTTTTT+GGG | - | chr1_2:46689463-46689482 | Msa0073230:intron | 50.0% |
| !!! | AAAGCGCCGCTTTTTTGGGT+CGG | - | chr1_2:46689467-46689486 | Msa0073230:intron | 50.0% |
| TGTGCTCCGACCCAAAAAAG+CGG | + | chr1_2:46689476-46689495 | None:intergenic | 50.0% | |
| TTGGGTCGGAGCACAAAACA+AGG | - | chr1_2:46689481-46689500 | Msa0073230:intron | 50.0% | |
| TGGGTCAAAAACGGGTCACA+TGG | + | chr1_2:46689544-46689563 | None:intergenic | 50.0% | |
| GGGTCGTATGGGTCAAAAAC+GGG | + | chr1_2:46689552-46689571 | None:intergenic | 50.0% | |
| CGGGTCGTATGGGTCAAAAA+CGG | + | chr1_2:46689553-46689572 | None:intergenic | 50.0% | |
| ! | CGTTTTTGACCCATACGACC+CGG | - | chr1_2:46689551-46689570 | Msa0073230:intron | 50.0% |
| ! | CAGTATGAAAGGCACGAACC+GGG | + | chr1_2:46689572-46689591 | None:intergenic | 50.0% |
| ! | CCAGTATGAAAGGCACGAAC+CGG | + | chr1_2:46689573-46689592 | None:intergenic | 50.0% |
| CGGTTCGTGCCTTTCATACT+GGG | - | chr1_2:46689571-46689590 | Msa0073230:intron | 50.0% | |
| GTGCTAGTACCAGAAGGAGT+TGG | - | chr1_2:46690118-46690137 | Msa0073230:intron | 50.0% | |
| GAGACAGTTCCAACTCCTTC+TGG | + | chr1_2:46690130-46690149 | None:intergenic | 50.0% | |
| CAGGCAAGGTTGTCAGAATC+GGG | + | chr1_2:46690893-46690912 | None:intergenic | 50.0% | |
| GCAGGCAAGGTTGTCAGAAT+CGG | + | chr1_2:46690894-46690913 | None:intergenic | 50.0% | |
| !! | GGACACATATTTGGCTTGGC+AGG | + | chr1_2:46691155-46691174 | None:intergenic | 50.0% |
| TTACACAGAAGGACGGGGAA+GGG | + | chr1_2:46691397-46691416 | None:intergenic | 50.0% | |
| ATTACACAGAAGGACGGGGA+AGG | + | chr1_2:46691398-46691417 | None:intergenic | 50.0% | |
| TGTCTTGCAAACCAAGGCAG+AGG | - | chr1_2:46691480-46691499 | Msa0073230:CDS | 50.0% | |
| ! | GCTGATTTCTTCCTCTGCCT+TGG | + | chr1_2:46691494-46691513 | None:intergenic | 50.0% |
| CCATAAAGGCAGGATTCTGG+TGG | + | chr1_2:46691769-46691788 | None:intergenic | 50.0% | |
| CCACCAGAATCCTGCCTTTA+TGG | - | chr1_2:46691766-46691785 | Msa0073230:CDS | 50.0% | |
| CGCTGTCGCTGCTTCTTATA+CGG | + | chr1_2:46691873-46691892 | None:intergenic | 50.0% | |
| !! | CTAGCTACTGACTCCCTTTG+TGG | + | chr1_2:46692831-46692850 | None:intergenic | 50.0% |
| CAAAGGGAGTCAGTAGCTAG+AGG | - | chr1_2:46692831-46692850 | Msa0073230:intron | 50.0% | |
| TACCCGGGAACATTTAGTGC+AGG | + | chr1_2:46693113-46693132 | None:intergenic | 50.0% | |
| GCTCAGCTGAAAAGGAACCC+AGG | + | chr1_2:46685315-46685334 | None:intergenic | 55.0% | |
| ! | CCGTGTGGTTGTGGTGGTTT+TGG | + | chr1_2:46685536-46685555 | None:intergenic | 55.0% |
| GTGTTACCGTGTGGTTGTGG+TGG | + | chr1_2:46685542-46685561 | None:intergenic | 55.0% | |
| GTAGAGGGAATGTGGCCATG+AGG | + | chr1_2:46685743-46685762 | None:intergenic | 55.0% | |
| ! | AAGGTTGACGGCTCGGATGA+TGG | - | chr1_2:46686982-46687001 | Msa0073230:CDS | 55.0% |
| TTCCGCCCCTGTAGAATCCT+CGG | - | chr1_2:46687089-46687108 | Msa0073230:intron | 55.0% | |
| ATCCGAGGATTCTACAGGGG+CGG | + | chr1_2:46687094-46687113 | None:intergenic | 55.0% | |
| TCAGGTGGATGGACACCTAG+TGG | + | chr1_2:46688394-46688413 | None:intergenic | 55.0% | |
| ! | GGCTGGTCCAACTTTCCAGA+TGG | + | chr1_2:46688472-46688491 | None:intergenic | 55.0% |
| GCGGCCGCTATTAACAACAG+AGG | + | chr1_2:46689324-46689343 | None:intergenic | 55.0% | |
| !!! | CTGTTTTTTGCCGCTCGGAG+CGG | + | chr1_2:46689343-46689362 | None:intergenic | 55.0% |
| ! | CTTTTCCCTAACGCGCGACT+CGG | + | chr1_2:46689386-46689405 | None:intergenic | 55.0% |
| AGTCGCGCGTTAGGGAAAAG+CGG | - | chr1_2:46689386-46689405 | Msa0073230:intron | 55.0% | |
| GGGAAAAGCGGGTCAATAGC+GGG | - | chr1_2:46689398-46689417 | Msa0073230:intron | 55.0% | |
| !!! | GGGTCAAAGCGCCGCTTTTT+TGG | - | chr1_2:46689462-46689481 | Msa0073230:intron | 55.0% |
| ! | CCGGTTCGTGCCTTTCATAC+TGG | - | chr1_2:46689570-46689589 | Msa0073230:intron | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr1_2:46689966-46689985 | Msa0073230:intron | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr1_2:46689967-46689986 | Msa0073230:intron | 55.0% |
| GGCCACCCCAAAAATTGACG+CGG | + | chr1_2:46689976-46689995 | None:intergenic | 55.0% | |
| GCCCCATAAAGGCAGGATTC+TGG | + | chr1_2:46691772-46691791 | None:intergenic | 55.0% | |
| AGACACAGCCCCATAAAGGC+AGG | + | chr1_2:46691779-46691798 | None:intergenic | 55.0% | |
| TGGCGACGGTGATGTTGTTG+AGG | - | chr1_2:46692116-46692135 | Msa0073230:CDS | 55.0% | |
| CGACGGTGATGTTGTTGAGG+TGG | - | chr1_2:46692119-46692138 | Msa0073230:CDS | 55.0% | |
| GGTGATGTTGTTGAGGTGGC+TGG | - | chr1_2:46692123-46692142 | Msa0073230:CDS | 55.0% | |
| GAGGTGGCTGGTAGCTTCAA+TGG | - | chr1_2:46692135-46692154 | Msa0073230:CDS | 55.0% | |
| TGGCTGGTAGCTTCAATGGC+TGG | - | chr1_2:46692139-46692158 | Msa0073230:CDS | 55.0% | |
| !! | GATTTTGGTCTGCGGTGCTG+TGG | - | chr1_2:46692584-46692603 | Msa0073230:intron | 55.0% |
| GCACGCACCTCATATACACC+AGG | + | chr1_2:46692616-46692635 | None:intergenic | 55.0% | |
| ! | AGAATCACGGTGTGCCACTG+TGG | + | chr1_2:46693067-46693086 | None:intergenic | 55.0% |
| ! | TTAGGCGTGGGCTGATAGTG+AGG | - | chr1_2:46693587-46693606 | Msa0073230:intron | 55.0% |
| ! | TAGATACAGCGATGGTGGCG+TGG | + | chr1_2:46693660-46693679 | None:intergenic | 55.0% |
| ! | CGGCTCGGATGATGGTACCA+CGG | - | chr1_2:46686990-46687009 | Msa0073230:CDS | 60.0% |
| TTAATAGCGGCCGCTCCGAG+CGG | - | chr1_2:46689330-46689349 | Msa0073230:intron | 60.0% | |
| GTCGCGCGTTAGGGAAAAGC+GGG | - | chr1_2:46689387-46689406 | Msa0073230:intron | 60.0% | |
| !! | CGGGTCAATAGCGGGTTTCG+CGG | - | chr1_2:46689406-46689425 | Msa0073230:intron | 60.0% |
| AGGCACGAACCGGGTCGTAT+GGG | + | chr1_2:46689563-46689582 | None:intergenic | 60.0% | |
| AAGGCACGAACCGGGTCGTA+TGG | + | chr1_2:46689564-46689583 | None:intergenic | 60.0% | |
| ! | GCGGGCGCTATTTCATGACG+CGG | + | chr1_2:46689934-46689953 | None:intergenic | 60.0% |
| AATTGACGCGGCGCGGTATG+CGG | + | chr1_2:46689964-46689983 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr1_2:46689971-46689990 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr1_2:46689968-46689987 | Msa0073230:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr1_2:46689971-46689990 | Msa0073230:intron | 60.0% |
| GTCAAAGCGGAAAAGCGGCG+CGG | + | chr1_2:46689997-46690016 | None:intergenic | 60.0% | |
| !! | GCGGTGCTGTGGCTTTATCC+TGG | - | chr1_2:46692595-46692614 | Msa0073230:intron | 60.0% |
| ! | GACTCGGTAGCGCTCTGACG+CGG | + | chr1_2:46689370-46689389 | None:intergenic | 65.0% |
| CGCTACCGAGTCGCGCGTTA+GGG | - | chr1_2:46689378-46689397 | Msa0073230:intron | 65.0% | |
| ATTGACGCGGCGCGGTATGC+GGG | + | chr1_2:46689963-46689982 | None:intergenic | 65.0% | |
| CGGTAGCGCTCTGACGCGGT+AGG | + | chr1_2:46689366-46689385 | None:intergenic | 70.0% | |
| GCGCTACCGAGTCGCGCGTT+AGG | - | chr1_2:46689377-46689396 | Msa0073230:intron | 70.0% | |
| CGGGTTTCGCGGCCGCTATC+CGG | - | chr1_2:46689417-46689436 | Msa0073230:intron | 70.0% | |
| GTTTCGCGGCCGCTATCCGG+TGG | - | chr1_2:46689420-46689439 | Msa0073230:intron | 70.0% | |
| GCGGCGCTTTGACCCGCTGT+TGG | + | chr1_2:46689457-46689476 | None:intergenic | 70.0% | |
| GCGGCCGCTATCCGGTGGAG+CGG | - | chr1_2:46689425-46689444 | Msa0073230:intron | 75.0% | |
| CGGCCGCTATCCGGTGGAGC+GGG | - | chr1_2:46689426-46689445 | Msa0073230:intron | 75.0% | |
| GGCCGCTATCCGGTGGAGCG+GGG | - | chr1_2:46689427-46689446 | Msa0073230:intron | 75.0% | |
| CGCCCCGCTCCACCGGATAG+CGG | + | chr1_2:46689432-46689451 | None:intergenic | 75.0% | |
| CGCTATCCGGTGGAGCGGGG+CGG | - | chr1_2:46689430-46689449 | Msa0073230:intron | 75.0% | |
| GTTGGTCCGCCCCGCTCCAC+CGG | + | chr1_2:46689439-46689458 | None:intergenic | 75.0% | |
| GGAGCGGGGCGGACCAACAG+CGG | - | chr1_2:46689441-46689460 | Msa0073230:intron | 75.0% | |
| GAGCGGGGCGGACCAACAGC+GGG | - | chr1_2:46689442-46689461 | Msa0073230:intron | 75.0% | |
| GCGGTATGCGGGCGCGTAGC+GGG | + | chr1_2:46689952-46689971 | None:intergenic | 75.0% | |
| CGCGGTATGCGGGCGCGTAG+CGG | + | chr1_2:46689953-46689972 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 46685306 | 46693875 | 46685306 | ID=Msa0073230;Name=Msa0073230 |
| chr1_2 | mRNA | 46685306 | 46693875 | 46685306 | ID=Msa0073230-mRNA-1;Parent=Msa0073230;Name=Msa0073230-mRNA-1;_AED=0.19;_eAED=0.19;_QI=76|0.91|0.92|1|0.91|0.92|13|595|626 |
| chr1_2 | exon | 46685306 | 46685857 | 46685306 | ID=Msa0073230-mRNA-1:exon:14246;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46686248 | 46686389 | 46686248 | ID=Msa0073230-mRNA-1:exon:14245;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46686554 | 46686605 | 46686554 | ID=Msa0073230-mRNA-1:exon:14244;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46686958 | 46687082 | 46686958 | ID=Msa0073230-mRNA-1:exon:14243;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46687593 | 46687712 | 46687593 | ID=Msa0073230-mRNA-1:exon:14242;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46689003 | 46689056 | 46689003 | ID=Msa0073230-mRNA-1:exon:14241;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46690386 | 46690436 | 46690386 | ID=Msa0073230-mRNA-1:exon:14240;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46690514 | 46690574 | 46690514 | ID=Msa0073230-mRNA-1:exon:14239;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46690684 | 46690807 | 46690684 | ID=Msa0073230-mRNA-1:exon:14238;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46691464 | 46692210 | 46691464 | ID=Msa0073230-mRNA-1:exon:14237;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46692298 | 46692452 | 46692298 | ID=Msa0073230-mRNA-1:exon:14236;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46693395 | 46693514 | 46693395 | ID=Msa0073230-mRNA-1:exon:14235;Parent=Msa0073230-mRNA-1 |
| chr1_2 | exon | 46693627 | 46693875 | 46693627 | ID=Msa0073230-mRNA-1:exon:14234;Parent=Msa0073230-mRNA-1 |
| chr1_2 | five_prime_UTR | 46693800 | 46693875 | 46693800 | ID=Msa0073230-mRNA-1:five_prime_utr;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46693627 | 46693799 | 46693627 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46693395 | 46693514 | 46693395 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46692298 | 46692452 | 46692298 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46691464 | 46692210 | 46691464 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46690684 | 46690807 | 46690684 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46690514 | 46690574 | 46690514 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46690386 | 46690436 | 46690386 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46689003 | 46689056 | 46689003 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46687593 | 46687712 | 46687593 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46686958 | 46687082 | 46686958 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46686554 | 46686605 | 46686554 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | CDS | 46686291 | 46686389 | 46686291 | ID=Msa0073230-mRNA-1:cds;Parent=Msa0073230-mRNA-1 |
| chr1_2 | three_prime_UTR | 46686248 | 46686290 | 46686248 | ID=Msa0073230-mRNA-1:three_prime_utr;Parent=Msa0073230-mRNA-1 |
| chr1_2 | three_prime_UTR | 46685306 | 46685857 | 46685306 | ID=Msa0073230-mRNA-1:three_prime_utr;Parent=Msa0073230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
