Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0077660 | XP_003591799.1 | 95.135 | 370 | 18 | 0 | 1 | 370 | 1 | 370 | 0.0 | 731 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0077660 | sp|Q84MB3|ACCH1_ARATH | 53.994 | 363 | 164 | 2 | 3 | 365 | 1 | 360 | 4.20e-140 | 410 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0077660 | G7I469 | 95.135 | 370 | 18 | 0 | 1 | 370 | 1 | 370 | 0.0 | 731 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0077630 | Msa0077660 | 0.981235 | 4.244598e-152 | -8.615850e-47 |
Msa0077660 | Msa0125690 | 0.910312 | 2.156024e-82 | -8.615850e-47 |
Msa0077660 | Msa0157320 | 0.979074 | 3.544891e-147 | -8.615850e-47 |
Msa0077660 | Msa0705550 | -0.815098 | 1.100356e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0077660 | MtrunA17_Chr1g0187821 | 95.135 | 370 | 18 | 0 | 1 | 370 | 1 | 370 | 0.0 | 731 |
Msa0077660 | MtrunA17_Chr1g0187811 | 82.804 | 378 | 57 | 4 | 1 | 370 | 116 | 493 | 0.0 | 655 |
Msa0077660 | MtrunA17_Chr1g0187811 | 93.023 | 43 | 3 | 0 | 427 | 469 | 25 | 67 | 1.44e-17 | 85.1 |
Msa0077660 | MtrunA17_Chr1g0187831 | 80.108 | 372 | 71 | 2 | 1 | 369 | 2 | 373 | 0.0 | 624 |
Msa0077660 | MtrunA17_Chr7g0235951 | 62.973 | 370 | 130 | 3 | 4 | 370 | 8 | 373 | 1.30e-173 | 492 |
Msa0077660 | MtrunA17_Chr8g0364471 | 60.800 | 375 | 136 | 4 | 1 | 368 | 1 | 371 | 1.55e-166 | 474 |
Msa0077660 | MtrunA17_Chr4g0055591 | 62.011 | 358 | 127 | 3 | 15 | 370 | 11 | 361 | 6.93e-165 | 469 |
Msa0077660 | MtrunA17_Chr8g0335411 | 62.740 | 365 | 129 | 3 | 9 | 370 | 13 | 373 | 1.33e-164 | 469 |
Msa0077660 | MtrunA17_Chr7g0236011 | 63.441 | 372 | 127 | 4 | 2 | 370 | 8 | 373 | 2.65e-164 | 469 |
Msa0077660 | MtrunA17_Chr7g0247991 | 62.264 | 371 | 131 | 4 | 4 | 370 | 8 | 373 | 5.62e-162 | 462 |
Msa0077660 | MtrunA17_Chr2g0311701 | 58.649 | 370 | 146 | 3 | 8 | 373 | 12 | 378 | 5.73e-161 | 461 |
Msa0077660 | MtrunA17_Chr2g0311711 | 60.714 | 364 | 139 | 3 | 8 | 370 | 10 | 370 | 1.28e-158 | 454 |
Msa0077660 | MtrunA17_Chr4g0066991 | 61.622 | 370 | 115 | 5 | 4 | 370 | 8 | 353 | 7.96e-156 | 446 |
Msa0077660 | MtrunA17_Chr2g0311681 | 56.077 | 362 | 152 | 3 | 13 | 370 | 11 | 369 | 5.77e-147 | 424 |
Msa0077660 | MtrunA17_Chr8g0336751 | 55.014 | 369 | 163 | 2 | 4 | 372 | 34 | 399 | 7.79e-146 | 423 |
Msa0077660 | MtrunA17_Chr2g0311691 | 55.801 | 362 | 153 | 3 | 13 | 370 | 11 | 369 | 3.05e-145 | 420 |
Msa0077660 | MtrunA17_Chr8g0336851 | 51.705 | 352 | 161 | 4 | 21 | 370 | 20 | 364 | 9.27e-143 | 414 |
Msa0077660 | MtrunA17_Chr8g0348081 | 53.107 | 354 | 159 | 3 | 18 | 370 | 17 | 364 | 9.27e-143 | 414 |
Msa0077660 | MtrunA17_Chr8g0336761 | 53.107 | 354 | 159 | 3 | 18 | 370 | 17 | 364 | 3.68e-141 | 409 |
Msa0077660 | MtrunA17_Chr8g0336631 | 52.394 | 355 | 161 | 4 | 18 | 370 | 17 | 365 | 5.85e-140 | 406 |
Msa0077660 | MtrunA17_Chr8g0354241 | 50.943 | 371 | 176 | 4 | 4 | 371 | 8 | 375 | 3.78e-139 | 405 |
Msa0077660 | MtrunA17_Chr8g0354261 | 50.943 | 371 | 176 | 4 | 4 | 371 | 8 | 375 | 2.02e-138 | 403 |
Msa0077660 | MtrunA17_Chr8g0336861 | 52.101 | 357 | 160 | 6 | 18 | 370 | 17 | 366 | 9.00e-137 | 398 |
Msa0077660 | MtrunA17_Chr2g0311741 | 57.751 | 329 | 136 | 2 | 42 | 370 | 2 | 327 | 3.30e-136 | 395 |
Msa0077660 | MtrunA17_Chr8g0336781 | 50.562 | 356 | 166 | 5 | 18 | 370 | 52 | 400 | 7.77e-136 | 397 |
Msa0077660 | MtrunA17_Chr2g0311761 | 50.541 | 370 | 177 | 4 | 2 | 370 | 8 | 372 | 3.11e-133 | 390 |
Msa0077660 | MtrunA17_Chr2g0311921 | 51.117 | 358 | 171 | 3 | 14 | 370 | 4 | 358 | 4.14e-132 | 386 |
Msa0077660 | MtrunA17_Chr2g0311831 | 50.949 | 369 | 176 | 3 | 2 | 370 | 8 | 371 | 9.54e-132 | 386 |
Msa0077660 | MtrunA17_Chr6g0472861 | 50.398 | 377 | 173 | 5 | 5 | 372 | 4 | 375 | 1.89e-130 | 382 |
Msa0077660 | MtrunA17_Chr4g0066121 | 54.354 | 333 | 142 | 5 | 18 | 347 | 17 | 342 | 2.10e-130 | 382 |
Msa0077660 | MtrunA17_Chr1g0167951 | 50.418 | 359 | 168 | 4 | 14 | 370 | 5 | 355 | 1.06e-129 | 380 |
Msa0077660 | MtrunA17_Chr2g0311861 | 49.860 | 357 | 156 | 3 | 14 | 370 | 14 | 347 | 3.88e-127 | 373 |
Msa0077660 | MtrunA17_Chr1g0167911 | 50.571 | 350 | 168 | 3 | 14 | 363 | 5 | 349 | 6.78e-125 | 368 |
Msa0077660 | MtrunA17_Chr4g0011311 | 61.644 | 292 | 104 | 3 | 1 | 288 | 1 | 288 | 1.11e-124 | 365 |
Msa0077660 | MtrunA17_Chr1g0184241 | 49.587 | 363 | 175 | 4 | 8 | 370 | 13 | 367 | 2.19e-123 | 364 |
Msa0077660 | MtrunA17_Chr7g0225881 | 47.594 | 374 | 185 | 5 | 5 | 372 | 4 | 372 | 3.18e-122 | 362 |
Msa0077660 | MtrunA17_Chr7g0235981 | 49.448 | 362 | 144 | 5 | 12 | 370 | 2 | 327 | 3.61e-121 | 357 |
Msa0077660 | MtrunA17_Chr1g0167961 | 49.167 | 360 | 173 | 6 | 14 | 370 | 20 | 372 | 1.98e-118 | 352 |
Msa0077660 | MtrunA17_Chr8g0362741 | 59.929 | 282 | 94 | 4 | 7 | 288 | 11 | 273 | 2.19e-112 | 333 |
Msa0077660 | MtrunA17_Chr1g0167931 | 45.658 | 357 | 151 | 4 | 14 | 370 | 5 | 318 | 5.09e-107 | 321 |
Msa0077660 | MtrunA17_Chr7g0266651 | 41.598 | 363 | 207 | 4 | 11 | 372 | 6 | 364 | 1.66e-99 | 303 |
Msa0077660 | MtrunA17_Chr1g0161081 | 44.167 | 360 | 189 | 7 | 13 | 369 | 21 | 371 | 7.40e-89 | 276 |
Msa0077660 | MtrunA17_Chr1g0161041 | 43.855 | 358 | 193 | 4 | 13 | 369 | 44 | 394 | 2.33e-87 | 273 |
Msa0077660 | MtrunA17_Chr1g0161111 | 42.541 | 362 | 200 | 4 | 9 | 369 | 76 | 430 | 2.14e-85 | 269 |
Msa0077660 | MtrunA17_Chr8g0336831 | 47.826 | 230 | 112 | 4 | 18 | 245 | 17 | 240 | 1.10e-73 | 233 |
Msa0077660 | MtrunA17_Chr8g0364161 | 56.322 | 174 | 72 | 2 | 5 | 178 | 9 | 178 | 2.64e-65 | 209 |
Msa0077660 | MtrunA17_Chr8g0336801 | 60.265 | 151 | 60 | 0 | 220 | 370 | 6 | 156 | 2.74e-65 | 207 |
Msa0077660 | MtrunA17_Chr8g0336871 | 54.335 | 173 | 73 | 1 | 193 | 365 | 3 | 169 | 1.47e-64 | 206 |
Msa0077660 | MtrunA17_Chr3g0128001 | 35.174 | 344 | 205 | 7 | 32 | 369 | 5 | 336 | 3.95e-60 | 200 |
Msa0077660 | MtrunA17_Chr7g0235991 | 54.268 | 164 | 73 | 1 | 45 | 208 | 1 | 162 | 9.08e-59 | 192 |
Msa0077660 | MtrunA17_Chr5g0412651 | 35.275 | 309 | 188 | 4 | 57 | 357 | 28 | 332 | 1.24e-57 | 194 |
Msa0077660 | MtrunA17_Chr5g0421041 | 33.618 | 351 | 201 | 10 | 39 | 376 | 21 | 352 | 1.66e-56 | 191 |
Msa0077660 | MtrunA17_Chr8g0375571 | 32.471 | 348 | 203 | 9 | 40 | 371 | 20 | 351 | 1.39e-55 | 189 |
Msa0077660 | MtrunA17_Chr8g0345831 | 32.919 | 322 | 200 | 4 | 56 | 370 | 31 | 343 | 4.09e-55 | 187 |
Msa0077660 | MtrunA17_Chr7g0265221 | 33.425 | 365 | 215 | 9 | 14 | 357 | 10 | 367 | 4.83e-55 | 188 |
Msa0077660 | MtrunA17_Chr5g0412681 | 33.871 | 310 | 185 | 5 | 57 | 358 | 23 | 320 | 3.84e-54 | 184 |
Msa0077660 | MtrunA17_Chr5g0423191 | 32.277 | 347 | 205 | 10 | 41 | 374 | 23 | 352 | 4.43e-53 | 182 |
Msa0077660 | MtrunA17_Chr7g0220011 | 35.000 | 300 | 181 | 6 | 66 | 360 | 38 | 328 | 1.38e-51 | 177 |
Msa0077660 | MtrunA17_Chr7g0265351 | 32.581 | 310 | 190 | 5 | 63 | 365 | 35 | 332 | 2.87e-51 | 177 |
Msa0077660 | MtrunA17_Chr3g0126741 | 32.759 | 348 | 214 | 11 | 8 | 344 | 2 | 340 | 2.95e-51 | 178 |
Msa0077660 | MtrunA17_Chr5g0423251 | 32.857 | 350 | 205 | 10 | 40 | 376 | 22 | 354 | 3.48e-51 | 177 |
Msa0077660 | MtrunA17_Chr5g0420951 | 33.333 | 345 | 206 | 10 | 40 | 373 | 27 | 358 | 3.94e-51 | 177 |
Msa0077660 | MtrunA17_Chr8g0375701 | 31.742 | 356 | 223 | 8 | 24 | 370 | 11 | 355 | 5.03e-51 | 177 |
Msa0077660 | MtrunA17_Chr7g0220001 | 34.884 | 301 | 176 | 7 | 66 | 358 | 40 | 328 | 6.84e-51 | 176 |
Msa0077660 | MtrunA17_Chr7g0242551 | 32.425 | 367 | 216 | 10 | 19 | 366 | 5 | 358 | 8.43e-51 | 176 |
Msa0077660 | MtrunA17_Chr5g0421011 | 32.945 | 343 | 210 | 8 | 41 | 375 | 23 | 353 | 8.50e-51 | 176 |
Msa0077660 | MtrunA17_Chr8g0336791 | 44.809 | 183 | 93 | 4 | 18 | 198 | 17 | 193 | 3.32e-50 | 169 |
Msa0077660 | MtrunA17_Chr6g0455481 | 35.161 | 310 | 177 | 9 | 59 | 358 | 35 | 330 | 4.12e-50 | 174 |
Msa0077660 | MtrunA17_Chr1g0179801 | 32.945 | 343 | 207 | 9 | 28 | 356 | 26 | 359 | 1.29e-49 | 174 |
Msa0077660 | MtrunA17_Chr5g0426891 | 31.494 | 308 | 203 | 6 | 67 | 370 | 39 | 342 | 1.36e-49 | 172 |
Msa0077660 | MtrunA17_Chr5g0412671 | 33.546 | 313 | 192 | 6 | 59 | 359 | 30 | 338 | 1.40e-49 | 173 |
Msa0077660 | MtrunA17_Chr5g0423221 | 31.642 | 335 | 208 | 10 | 40 | 365 | 46 | 368 | 2.05e-49 | 173 |
Msa0077660 | MtrunA17_Chr5g0421101 | 30.904 | 343 | 213 | 9 | 40 | 372 | 22 | 350 | 4.26e-49 | 172 |
Msa0077660 | MtrunA17_Chr2g0314391 | 30.178 | 338 | 216 | 9 | 49 | 374 | 48 | 377 | 4.59e-49 | 172 |
Msa0077660 | MtrunA17_Chr1g0184111 | 34.084 | 311 | 190 | 5 | 66 | 369 | 36 | 338 | 6.76e-49 | 171 |
Msa0077660 | MtrunA17_Chr1g0184161 | 32.903 | 310 | 196 | 6 | 66 | 370 | 37 | 339 | 1.06e-48 | 170 |
Msa0077660 | MtrunA17_Chr5g0420941 | 30.769 | 351 | 221 | 9 | 28 | 370 | 10 | 346 | 1.08e-48 | 171 |
Msa0077660 | MtrunA17_Chr1g0184121 | 33.442 | 308 | 196 | 4 | 66 | 369 | 36 | 338 | 1.43e-48 | 170 |
Msa0077660 | MtrunA17_Chr5g0421091 | 32.295 | 353 | 216 | 12 | 29 | 372 | 11 | 349 | 2.71e-48 | 169 |
Msa0077660 | MtrunA17_Chr3g0093761 | 32.565 | 347 | 210 | 10 | 28 | 365 | 17 | 348 | 3.51e-48 | 169 |
Msa0077660 | MtrunA17_Chr3g0093741 | 32.184 | 348 | 211 | 9 | 28 | 365 | 17 | 349 | 4.62e-48 | 169 |
Msa0077660 | MtrunA17_Chr3g0109041 | 30.372 | 349 | 220 | 8 | 29 | 365 | 10 | 347 | 7.37e-48 | 168 |
Msa0077660 | MtrunA17_Chr5g0423201 | 31.884 | 345 | 210 | 10 | 40 | 373 | 22 | 352 | 1.32e-47 | 168 |
Msa0077660 | MtrunA17_Chr2g0314381 | 27.684 | 354 | 237 | 8 | 29 | 374 | 42 | 384 | 1.71e-47 | 168 |
Msa0077660 | MtrunA17_Chr1g0162351 | 32.295 | 353 | 196 | 10 | 47 | 370 | 57 | 395 | 2.45e-47 | 168 |
Msa0077660 | MtrunA17_Chr2g0311631 | 28.763 | 372 | 239 | 8 | 4 | 366 | 3 | 357 | 2.78e-47 | 167 |
Msa0077660 | MtrunA17_Chr5g0420901 | 30.028 | 353 | 225 | 9 | 29 | 373 | 12 | 350 | 3.95e-47 | 166 |
Msa0077660 | MtrunA17_Chr4g0045431 | 34.043 | 329 | 162 | 12 | 47 | 343 | 14 | 319 | 4.49e-47 | 166 |
Msa0077660 | MtrunA17_Chr1g0184151 | 33.550 | 307 | 194 | 5 | 66 | 368 | 37 | 337 | 4.98e-47 | 166 |
Msa0077660 | MtrunA17_Chr1g0162321 | 32.295 | 353 | 196 | 10 | 47 | 370 | 57 | 395 | 5.32e-47 | 167 |
Msa0077660 | MtrunA17_Chr3g0093751 | 30.925 | 346 | 218 | 8 | 28 | 365 | 17 | 349 | 5.41e-47 | 166 |
Msa0077660 | MtrunA17_Chr1g0184101 | 33.544 | 316 | 190 | 8 | 66 | 372 | 37 | 341 | 1.29e-46 | 165 |
Msa0077660 | MtrunA17_Chr8g0375601 | 29.360 | 344 | 227 | 7 | 40 | 374 | 20 | 356 | 1.52e-46 | 165 |
Msa0077660 | MtrunA17_Chr4g0006371 | 30.518 | 367 | 228 | 9 | 20 | 365 | 5 | 365 | 1.99e-46 | 165 |
Msa0077660 | MtrunA17_Chr8g0375671 | 29.846 | 325 | 216 | 6 | 59 | 376 | 44 | 363 | 2.90e-46 | 164 |
Msa0077660 | MtrunA17_Chr4g0045411 | 32.441 | 299 | 170 | 8 | 66 | 342 | 29 | 317 | 3.18e-46 | 164 |
Msa0077660 | MtrunA17_Chr2g0314401 | 30.484 | 351 | 224 | 10 | 28 | 370 | 16 | 354 | 6.31e-46 | 163 |
Msa0077660 | MtrunA17_Chr2g0332191 | 33.623 | 345 | 192 | 12 | 52 | 374 | 35 | 364 | 8.19e-46 | 163 |
Msa0077660 | MtrunA17_Chr8g0365241 | 30.573 | 314 | 205 | 6 | 66 | 373 | 56 | 362 | 1.19e-45 | 163 |
Msa0077660 | MtrunA17_Chr5g0437181 | 31.250 | 352 | 221 | 9 | 29 | 369 | 14 | 355 | 1.59e-45 | 162 |
Msa0077660 | MtrunA17_Chr8g0364171 | 67.273 | 110 | 36 | 0 | 179 | 288 | 17 | 126 | 1.94e-45 | 155 |
Msa0077660 | MtrunA17_Chr4g0045451 | 30.435 | 345 | 187 | 11 | 47 | 362 | 14 | 334 | 1.02e-44 | 160 |
Msa0077660 | MtrunA17_Chr8g0371921 | 32.963 | 270 | 172 | 4 | 54 | 315 | 24 | 292 | 1.31e-44 | 160 |
Msa0077660 | MtrunA17_Chr3g0113641 | 30.194 | 361 | 235 | 9 | 20 | 371 | 6 | 358 | 1.39e-44 | 160 |
Msa0077660 | MtrunA17_Chr4g0045441 | 33.230 | 322 | 174 | 10 | 47 | 343 | 14 | 319 | 1.50e-44 | 159 |
Msa0077660 | MtrunA17_Chr5g0420981 | 30.117 | 342 | 221 | 9 | 40 | 373 | 27 | 358 | 7.93e-44 | 158 |
Msa0077660 | MtrunA17_Chr8g0371931 | 32.700 | 263 | 168 | 4 | 61 | 315 | 31 | 292 | 2.21e-43 | 157 |
Msa0077660 | MtrunA17_Chr1g0168001 | 45.029 | 171 | 87 | 5 | 14 | 180 | 5 | 172 | 2.59e-43 | 150 |
Msa0077660 | MtrunA17_Chr3g0102041 | 32.700 | 263 | 168 | 4 | 61 | 315 | 31 | 292 | 7.27e-43 | 155 |
Msa0077660 | MtrunA17_Chr5g0423211 | 29.178 | 353 | 228 | 9 | 29 | 372 | 13 | 352 | 1.26e-42 | 154 |
Msa0077660 | MtrunA17_Chr4g0050031 | 31.317 | 281 | 184 | 7 | 67 | 342 | 62 | 338 | 3.00e-42 | 154 |
Msa0077660 | MtrunA17_Chr2g0311751 | 55.738 | 122 | 54 | 0 | 59 | 180 | 19 | 140 | 4.74e-42 | 147 |
Msa0077660 | MtrunA17_Chr1g0162191 | 29.653 | 317 | 212 | 6 | 66 | 376 | 46 | 357 | 7.24e-42 | 152 |
Msa0077660 | MtrunA17_Chr7g0250511 | 31.973 | 294 | 183 | 6 | 66 | 351 | 48 | 332 | 9.43e-42 | 152 |
Msa0077660 | MtrunA17_Chr1g0162361 | 30.488 | 328 | 194 | 7 | 66 | 370 | 26 | 342 | 1.15e-41 | 151 |
Msa0077660 | MtrunA17_Chr8g0375681 | 31.802 | 283 | 184 | 4 | 101 | 378 | 15 | 293 | 1.31e-41 | 150 |
Msa0077660 | MtrunA17_Chr4g0045471 | 31.715 | 309 | 174 | 8 | 75 | 353 | 29 | 330 | 2.43e-41 | 151 |
Msa0077660 | MtrunA17_Chr3g0121141 | 32.500 | 320 | 191 | 12 | 66 | 375 | 3 | 307 | 6.06e-41 | 149 |
Msa0077660 | MtrunA17_Chr5g0439011 | 33.444 | 302 | 175 | 10 | 65 | 354 | 3 | 290 | 6.22e-41 | 149 |
Msa0077660 | MtrunA17_Chr3g0125201 | 30.744 | 309 | 176 | 12 | 65 | 356 | 1 | 288 | 1.55e-40 | 147 |
Msa0077660 | MtrunA17_Chr5g0420721 | 36.318 | 201 | 124 | 2 | 175 | 374 | 57 | 254 | 2.85e-40 | 145 |
Msa0077660 | MtrunA17_Chr2g0319491 | 30.619 | 307 | 182 | 8 | 52 | 349 | 20 | 304 | 3.20e-40 | 147 |
Msa0077660 | MtrunA17_Chr7g0239821 | 29.073 | 313 | 192 | 8 | 66 | 364 | 63 | 359 | 3.40e-40 | 148 |
Msa0077660 | MtrunA17_Chr7g0239111 | 29.139 | 302 | 198 | 7 | 66 | 360 | 54 | 346 | 4.06e-40 | 148 |
Msa0077660 | MtrunA17_Chr5g0405411 | 30.798 | 263 | 173 | 4 | 61 | 315 | 31 | 292 | 9.72e-40 | 147 |
Msa0077660 | MtrunA17_Chr2g0296371 | 29.582 | 311 | 198 | 7 | 67 | 365 | 50 | 351 | 2.65e-39 | 145 |
Msa0077660 | MtrunA17_Chr2g0289341 | 31.353 | 303 | 178 | 12 | 68 | 355 | 5 | 292 | 3.13e-39 | 144 |
Msa0077660 | MtrunA17_Chr7g0239121 | 26.875 | 320 | 215 | 8 | 66 | 376 | 50 | 359 | 1.28e-38 | 144 |
Msa0077660 | MtrunA17_Chr1g0204181 | 31.908 | 304 | 177 | 6 | 67 | 351 | 59 | 351 | 1.62e-38 | 144 |
Msa0077660 | MtrunA17_Chr5g0398291 | 28.696 | 345 | 214 | 10 | 29 | 353 | 8 | 340 | 3.16e-38 | 142 |
Msa0077660 | MtrunA17_Chr1g0167921 | 52.941 | 119 | 56 | 0 | 169 | 287 | 38 | 156 | 7.44e-38 | 136 |
Msa0077660 | MtrunA17_Chr7g0239101 | 28.105 | 306 | 202 | 7 | 66 | 363 | 54 | 349 | 1.23e-37 | 141 |
Msa0077660 | MtrunA17_Chr1g0187841 | 58.865 | 141 | 28 | 1 | 369 | 479 | 254 | 394 | 2.32e-37 | 142 |
Msa0077660 | MtrunA17_Chr6g0474391 | 30.303 | 330 | 200 | 8 | 39 | 351 | 40 | 356 | 2.51e-37 | 140 |
Msa0077660 | MtrunA17_Chr8g0370711 | 30.000 | 310 | 195 | 10 | 61 | 358 | 46 | 345 | 5.98e-37 | 139 |
Msa0077660 | MtrunA17_Chr8g0370721 | 30.530 | 321 | 200 | 10 | 61 | 370 | 46 | 354 | 9.83e-37 | 138 |
Msa0077660 | MtrunA17_Chr7g0239091 | 27.362 | 307 | 207 | 5 | 67 | 371 | 160 | 452 | 3.57e-36 | 139 |
Msa0077660 | MtrunA17_Chr3g0145171 | 27.187 | 320 | 212 | 8 | 61 | 370 | 46 | 354 | 2.46e-35 | 134 |
Msa0077660 | MtrunA17_Chr1g0191201 | 29.042 | 334 | 192 | 10 | 42 | 351 | 33 | 345 | 4.25e-35 | 134 |
Msa0077660 | MtrunA17_Chr4g0045461 | 30.581 | 327 | 189 | 8 | 40 | 343 | 7 | 318 | 1.01e-34 | 133 |
Msa0077660 | MtrunA17_Chr3g0130391 | 28.333 | 360 | 222 | 9 | 8 | 346 | 9 | 353 | 1.55e-34 | 133 |
Msa0077660 | MtrunA17_Chr5g0424201 | 28.443 | 334 | 205 | 8 | 34 | 351 | 12 | 327 | 4.21e-34 | 130 |
Msa0077660 | MtrunA17_Chr3g0087031 | 27.701 | 361 | 227 | 12 | 16 | 360 | 9 | 351 | 1.71e-33 | 130 |
Msa0077660 | MtrunA17_Chr5g0424211 | 29.595 | 321 | 188 | 10 | 39 | 340 | 15 | 316 | 2.78e-33 | 129 |
Msa0077660 | MtrunA17_Chr4g0064781 | 29.333 | 300 | 183 | 9 | 58 | 344 | 41 | 324 | 1.14e-32 | 127 |
Msa0077660 | MtrunA17_Chr7g0232161 | 30.894 | 246 | 151 | 6 | 65 | 300 | 58 | 294 | 2.28e-32 | 125 |
Msa0077660 | MtrunA17_Chr8g0351101 | 29.730 | 333 | 195 | 7 | 40 | 351 | 31 | 345 | 3.54e-32 | 126 |
Msa0077660 | MtrunA17_Chr6g0488511 | 28.421 | 285 | 179 | 11 | 65 | 338 | 1 | 271 | 1.60e-31 | 123 |
Msa0077660 | MtrunA17_Chr3g0092531 | 32.800 | 250 | 133 | 9 | 85 | 318 | 26 | 256 | 2.02e-31 | 123 |
Msa0077660 | MtrunA17_Chr1g0148771 | 28.025 | 314 | 188 | 9 | 52 | 352 | 50 | 338 | 2.84e-31 | 123 |
Msa0077660 | MtrunA17_Chr2g0285931 | 28.614 | 332 | 184 | 10 | 67 | 371 | 28 | 333 | 1.20e-30 | 121 |
Msa0077660 | MtrunA17_Chr2g0314371 | 28.431 | 306 | 179 | 9 | 28 | 303 | 16 | 311 | 1.05e-29 | 119 |
Msa0077660 | MtrunA17_Chr3g0126761 | 36.585 | 164 | 99 | 2 | 178 | 339 | 42 | 202 | 1.51e-29 | 115 |
Msa0077660 | MtrunA17_Chr3g0125421 | 27.003 | 337 | 199 | 11 | 40 | 351 | 14 | 328 | 4.57e-29 | 117 |
Msa0077660 | MtrunA17_Chr8g0384461 | 26.513 | 347 | 221 | 9 | 24 | 351 | 6 | 337 | 7.20e-29 | 117 |
Msa0077660 | MtrunA17_Chr3g0145201 | 27.597 | 308 | 208 | 9 | 51 | 349 | 667 | 968 | 1.31e-28 | 120 |
Msa0077660 | MtrunA17_Chr5g0407731 | 29.653 | 317 | 186 | 11 | 67 | 370 | 33 | 325 | 1.70e-28 | 115 |
Msa0077660 | MtrunA17_Chr2g0313111 | 28.814 | 295 | 176 | 12 | 66 | 346 | 27 | 301 | 8.25e-28 | 113 |
Msa0077660 | MtrunA17_Chr3g0145181 | 27.273 | 297 | 202 | 8 | 61 | 349 | 43 | 333 | 8.38e-28 | 114 |
Msa0077660 | MtrunA17_Chr8g0384481 | 27.273 | 330 | 199 | 9 | 42 | 350 | 38 | 347 | 9.26e-28 | 114 |
Msa0077660 | MtrunA17_Chr1g0170631 | 30.000 | 200 | 133 | 4 | 178 | 374 | 1 | 196 | 2.42e-27 | 108 |
Msa0077660 | MtrunA17_Chr3g0114861 | 30.000 | 310 | 193 | 7 | 59 | 357 | 32 | 328 | 2.46e-27 | 112 |
Msa0077660 | MtrunA17_Chr5g0407781 | 26.994 | 326 | 187 | 12 | 66 | 371 | 4 | 298 | 3.27e-26 | 108 |
Msa0077660 | MtrunA17_Chr7g0239071 | 24.908 | 273 | 194 | 5 | 99 | 365 | 29 | 296 | 7.65e-26 | 107 |
Msa0077660 | MtrunA17_Chr3g0114871 | 28.862 | 246 | 155 | 6 | 63 | 297 | 38 | 274 | 2.02e-25 | 105 |
Msa0077660 | MtrunA17_Chr8g0336841 | 54.217 | 83 | 38 | 0 | 288 | 370 | 9 | 91 | 2.89e-25 | 99.4 |
Msa0077660 | MtrunA17_Chr4g0075471 | 42.727 | 110 | 59 | 2 | 228 | 336 | 32 | 138 | 6.37e-25 | 100 |
Msa0077660 | MtrunA17_Chr5g0394071 | 35.119 | 168 | 100 | 2 | 182 | 349 | 4 | 162 | 1.18e-24 | 100 |
Msa0077660 | MtrunA17_Chr1g0161101 | 39.766 | 171 | 91 | 3 | 161 | 330 | 342 | 501 | 3.61e-24 | 105 |
Msa0077660 | MtrunA17_Chr1g0194321 | 26.934 | 349 | 198 | 14 | 58 | 373 | 11 | 335 | 4.36e-24 | 103 |
Msa0077660 | MtrunA17_Chr5g0420881 | 30.872 | 149 | 99 | 2 | 226 | 373 | 2 | 147 | 4.68e-24 | 97.8 |
Msa0077660 | MtrunA17_Chr4g0068891 | 28.125 | 320 | 197 | 12 | 67 | 371 | 20 | 321 | 4.76e-24 | 102 |
Msa0077660 | MtrunA17_Chr3g0105281 | 26.718 | 262 | 163 | 8 | 67 | 315 | 34 | 279 | 8.90e-24 | 101 |
Msa0077660 | MtrunA17_Chr8g0358941 | 27.508 | 309 | 185 | 10 | 89 | 372 | 41 | 335 | 2.33e-23 | 100 |
Msa0077660 | MtrunA17_Chr8g0348951 | 29.010 | 293 | 180 | 10 | 66 | 342 | 4 | 284 | 5.12e-23 | 99.8 |
Msa0077660 | MtrunA17_Chr7g0247741 | 30.968 | 310 | 162 | 14 | 59 | 343 | 3 | 285 | 9.70e-23 | 99.0 |
Msa0077660 | MtrunA17_Chr6g0486831 | 26.398 | 322 | 198 | 10 | 63 | 356 | 16 | 326 | 2.24e-22 | 98.2 |
Msa0077660 | MtrunA17_Chr4g0037611 | 42.149 | 121 | 69 | 1 | 200 | 319 | 11 | 131 | 2.63e-22 | 94.0 |
Msa0077660 | MtrunA17_Chr7g0233661 | 39.316 | 117 | 71 | 0 | 205 | 321 | 1 | 117 | 4.03e-22 | 92.8 |
Msa0077660 | MtrunA17_Chr4g0052251 | 27.393 | 303 | 181 | 10 | 67 | 349 | 29 | 312 | 5.92e-22 | 96.7 |
Msa0077660 | MtrunA17_Chr4g0053251 | 25.382 | 327 | 193 | 11 | 66 | 354 | 7 | 320 | 3.12e-21 | 94.4 |
Msa0077660 | MtrunA17_Chr3g0092581 | 34.375 | 160 | 97 | 5 | 193 | 349 | 4 | 158 | 1.38e-20 | 89.4 |
Msa0077660 | MtrunA17_Chr2g0311611 | 48.571 | 70 | 29 | 1 | 226 | 288 | 2 | 71 | 3.12e-19 | 81.6 |
Msa0077660 | MtrunA17_Chr1g0158011 | 26.295 | 251 | 171 | 9 | 106 | 351 | 1 | 242 | 5.64e-19 | 86.7 |
Msa0077660 | MtrunA17_Chr1g0158021 | 25.957 | 235 | 161 | 9 | 53 | 280 | 33 | 261 | 1.76e-18 | 85.1 |
Msa0077660 | MtrunA17_Chr2g0311821 | 50.526 | 95 | 41 | 2 | 71 | 163 | 11 | 101 | 2.51e-18 | 81.3 |
Msa0077660 | MtrunA17_Chr7g0219991 | 40.187 | 107 | 62 | 2 | 181 | 286 | 249 | 354 | 2.52e-18 | 86.3 |
Msa0077660 | MtrunA17_Chr8g0389941 | 26.923 | 286 | 173 | 9 | 89 | 344 | 51 | 330 | 2.75e-18 | 86.3 |
Msa0077660 | MtrunA17_Chr4g0064771 | 32.121 | 165 | 101 | 5 | 185 | 344 | 31 | 189 | 4.77e-18 | 82.8 |
Msa0077660 | MtrunA17_Chr4g0055911 | 26.994 | 326 | 203 | 14 | 61 | 365 | 3 | 314 | 5.81e-18 | 84.7 |
Msa0077660 | MtrunA17_Chr7g0252371 | 57.143 | 84 | 35 | 1 | 183 | 265 | 1 | 84 | 1.76e-17 | 78.2 |
Msa0077660 | MtrunA17_Chr2g0319521 | 33.028 | 109 | 73 | 0 | 180 | 288 | 16 | 124 | 4.40e-16 | 75.1 |
Msa0077660 | MtrunA17_Chr1g0185661 | 37.681 | 138 | 50 | 3 | 369 | 475 | 918 | 1050 | 5.64e-16 | 81.3 |
Msa0077660 | MtrunA17_Chr2g0293931 | 33.793 | 145 | 86 | 5 | 183 | 317 | 10 | 154 | 3.99e-15 | 74.3 |
Msa0077660 | MtrunA17_Chr8g0375581 | 36.471 | 85 | 53 | 1 | 202 | 285 | 2 | 86 | 3.56e-14 | 67.8 |
Msa0077660 | MtrunA17_Chr4g0004071 | 24.601 | 313 | 206 | 11 | 59 | 357 | 3 | 299 | 1.49e-13 | 71.6 |
Msa0077660 | MtrunA17_Chr8g0375591 | 40.741 | 81 | 39 | 2 | 61 | 136 | 40 | 116 | 2.41e-12 | 64.3 |
Msa0077660 | MtrunA17_Chr7g0256741 | 24.055 | 291 | 197 | 9 | 67 | 345 | 10 | 288 | 6.46e-12 | 66.6 |
Msa0077660 | MtrunA17_Chr2g0287821 | 34.783 | 138 | 54 | 4 | 369 | 475 | 290 | 422 | 1.08e-11 | 66.6 |
Msa0077660 | MtrunA17_Chr1g0170641 | 27.132 | 129 | 88 | 2 | 40 | 167 | 22 | 145 | 2.80e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0077660 | AT1G06620.1 | 53.994 | 363 | 164 | 2 | 3 | 365 | 1 | 360 | 4.27e-141 | 410 |
Msa0077660 | AT5G59540.1 | 51.667 | 360 | 170 | 3 | 13 | 370 | 9 | 366 | 1.73e-135 | 395 |
Msa0077660 | AT2G30840.1 | 54.545 | 363 | 159 | 4 | 11 | 370 | 3 | 362 | 3.45e-135 | 394 |
Msa0077660 | AT5G59530.1 | 52.355 | 361 | 165 | 5 | 13 | 370 | 8 | 364 | 2.73e-134 | 392 |
Msa0077660 | AT2G30840.3 | 53.444 | 363 | 157 | 5 | 11 | 370 | 3 | 356 | 1.86e-129 | 380 |
Msa0077660 | AT2G30830.1 | 51.389 | 360 | 167 | 5 | 13 | 370 | 5 | 358 | 2.92e-128 | 377 |
Msa0077660 | AT1G06650.2 | 48.895 | 362 | 179 | 4 | 13 | 370 | 10 | 369 | 4.06e-127 | 374 |
Msa0077660 | AT1G06640.1 | 48.656 | 372 | 184 | 5 | 3 | 370 | 1 | 369 | 2.75e-124 | 367 |
Msa0077660 | AT2G25450.1 | 48.753 | 361 | 178 | 5 | 12 | 370 | 4 | 359 | 3.49e-124 | 366 |
Msa0077660 | AT1G04350.1 | 49.444 | 360 | 175 | 4 | 13 | 370 | 6 | 360 | 7.24e-124 | 365 |
Msa0077660 | AT5G43440.1 | 50.139 | 359 | 173 | 4 | 15 | 370 | 10 | 365 | 1.34e-122 | 362 |
Msa0077660 | AT5G43450.1 | 49.162 | 358 | 177 | 3 | 14 | 370 | 9 | 362 | 2.58e-120 | 357 |
Msa0077660 | AT1G04380.1 | 51.662 | 331 | 154 | 2 | 40 | 370 | 21 | 345 | 3.56e-120 | 355 |
Msa0077660 | AT1G03410.2 | 48.333 | 360 | 180 | 5 | 14 | 370 | 5 | 361 | 3.69e-120 | 356 |
Msa0077660 | AT1G03410.1 | 46.649 | 373 | 193 | 5 | 1 | 370 | 29 | 398 | 9.27e-120 | 357 |
Msa0077660 | AT1G06645.1 | 46.361 | 371 | 186 | 6 | 6 | 370 | 16 | 379 | 1.22e-116 | 348 |
Msa0077660 | AT3G61400.1 | 46.814 | 361 | 181 | 6 | 14 | 366 | 10 | 367 | 2.29e-116 | 347 |
Msa0077660 | AT1G03400.1 | 46.927 | 358 | 178 | 4 | 14 | 370 | 5 | 351 | 3.03e-116 | 346 |
Msa0077660 | AT1G03400.2 | 43.523 | 386 | 178 | 5 | 14 | 370 | 5 | 379 | 8.99e-110 | 330 |
Msa0077660 | AT1G06620.2 | 53.333 | 285 | 130 | 2 | 3 | 287 | 1 | 282 | 3.03e-107 | 320 |
Msa0077660 | AT2G30840.2 | 53.763 | 279 | 125 | 2 | 11 | 287 | 3 | 279 | 7.59e-103 | 310 |
Msa0077660 | AT5G59540.2 | 49.640 | 278 | 136 | 3 | 13 | 288 | 9 | 284 | 2.31e-98 | 298 |
Msa0077660 | AT1G06650.1 | 48.746 | 279 | 138 | 3 | 13 | 288 | 10 | 286 | 3.51e-96 | 293 |
Msa0077660 | AT5G43450.2 | 50.355 | 282 | 135 | 3 | 14 | 294 | 9 | 286 | 3.18e-95 | 290 |
Msa0077660 | AT1G06640.2 | 47.826 | 299 | 148 | 5 | 3 | 296 | 1 | 296 | 2.02e-94 | 289 |
Msa0077660 | AT5G43440.2 | 49.822 | 281 | 135 | 4 | 15 | 292 | 10 | 287 | 1.65e-93 | 285 |
Msa0077660 | AT1G06640.3 | 47.751 | 289 | 145 | 4 | 3 | 288 | 1 | 286 | 2.95e-93 | 285 |
Msa0077660 | AT3G61400.2 | 47.163 | 282 | 139 | 5 | 14 | 288 | 10 | 288 | 4.03e-90 | 277 |
Msa0077660 | AT1G04380.2 | 48.996 | 249 | 121 | 2 | 40 | 288 | 21 | 263 | 5.50e-84 | 260 |
Msa0077660 | AT5G24530.1 | 35.159 | 347 | 202 | 6 | 32 | 368 | 5 | 338 | 5.27e-64 | 211 |
Msa0077660 | AT4G10490.1 | 33.762 | 311 | 196 | 4 | 66 | 371 | 41 | 346 | 4.08e-61 | 204 |
Msa0077660 | AT4G10500.1 | 34.286 | 350 | 219 | 7 | 25 | 369 | 2 | 345 | 4.56e-61 | 203 |
Msa0077660 | AT3G13610.1 | 33.819 | 343 | 210 | 8 | 28 | 365 | 26 | 356 | 7.34e-61 | 203 |
Msa0077660 | AT1G55290.1 | 34.670 | 349 | 200 | 10 | 28 | 365 | 25 | 356 | 3.94e-60 | 201 |
Msa0077660 | AT3G12900.1 | 32.845 | 341 | 216 | 8 | 28 | 365 | 21 | 351 | 1.44e-54 | 187 |
Msa0077660 | AT2G36690.2 | 33.832 | 334 | 210 | 5 | 26 | 353 | 18 | 346 | 1.87e-54 | 187 |
Msa0077660 | AT2G36690.1 | 33.832 | 334 | 210 | 5 | 26 | 353 | 18 | 346 | 1.87e-54 | 187 |
Msa0077660 | AT2G38240.1 | 30.899 | 356 | 222 | 10 | 21 | 365 | 4 | 346 | 1.36e-47 | 168 |
Msa0077660 | AT1G17020.1 | 30.769 | 351 | 227 | 8 | 28 | 370 | 16 | 358 | 9.21e-47 | 166 |
Msa0077660 | AT4G25300.1 | 29.178 | 353 | 227 | 11 | 29 | 370 | 16 | 356 | 5.35e-45 | 161 |
Msa0077660 | AT4G16330.2 | 29.630 | 324 | 203 | 8 | 50 | 365 | 53 | 359 | 1.29e-44 | 160 |
Msa0077660 | AT2G44800.1 | 32.343 | 303 | 188 | 6 | 59 | 353 | 44 | 337 | 2.63e-44 | 159 |
Msa0077660 | AT1G78550.1 | 28.526 | 312 | 207 | 7 | 67 | 370 | 53 | 356 | 8.00e-44 | 158 |
Msa0077660 | AT3G19000.1 | 32.278 | 316 | 187 | 7 | 47 | 343 | 14 | 321 | 9.06e-44 | 158 |
Msa0077660 | AT3G11180.1 | 31.268 | 355 | 223 | 9 | 20 | 363 | 47 | 391 | 9.33e-44 | 159 |
Msa0077660 | AT4G25310.1 | 30.028 | 353 | 221 | 12 | 29 | 370 | 16 | 353 | 1.02e-43 | 157 |
Msa0077660 | AT5G05600.1 | 29.491 | 373 | 239 | 9 | 1 | 365 | 8 | 364 | 1.19e-43 | 158 |
Msa0077660 | AT3G11180.2 | 30.833 | 360 | 228 | 9 | 20 | 368 | 47 | 396 | 2.23e-43 | 158 |
Msa0077660 | AT1G17010.1 | 28.531 | 354 | 237 | 9 | 28 | 373 | 16 | 361 | 7.03e-43 | 155 |
Msa0077660 | AT3G60290.1 | 32.343 | 303 | 188 | 6 | 59 | 353 | 44 | 337 | 1.95e-42 | 154 |
Msa0077660 | AT3G51240.1 | 31.641 | 256 | 168 | 3 | 66 | 315 | 37 | 291 | 6.17e-42 | 153 |
Msa0077660 | AT3G55970.1 | 29.830 | 352 | 223 | 9 | 17 | 358 | 12 | 349 | 9.73e-40 | 147 |
Msa0077660 | AT1G77330.1 | 31.071 | 280 | 162 | 10 | 65 | 329 | 1 | 264 | 2.49e-38 | 142 |
Msa0077660 | AT3G19010.1 | 30.063 | 316 | 189 | 8 | 47 | 343 | 14 | 316 | 6.58e-38 | 142 |
Msa0077660 | AT3G19010.4 | 30.063 | 316 | 189 | 8 | 47 | 343 | 14 | 316 | 6.58e-38 | 142 |
Msa0077660 | AT4G21200.1 | 32.646 | 291 | 168 | 8 | 67 | 349 | 42 | 312 | 7.05e-38 | 141 |
Msa0077660 | AT5G08640.2 | 28.107 | 338 | 207 | 10 | 29 | 349 | 6 | 324 | 1.40e-37 | 140 |
Msa0077660 | AT5G08640.1 | 28.107 | 338 | 207 | 10 | 29 | 349 | 6 | 324 | 1.40e-37 | 140 |
Msa0077660 | AT1G05010.1 | 33.929 | 280 | 159 | 12 | 66 | 334 | 3 | 267 | 2.71e-37 | 139 |
Msa0077660 | AT3G21420.1 | 30.599 | 317 | 204 | 8 | 66 | 372 | 54 | 364 | 3.46e-37 | 140 |
Msa0077660 | AT5G12270.1 | 29.396 | 364 | 235 | 9 | 17 | 370 | 8 | 359 | 6.29e-37 | 139 |
Msa0077660 | AT4G22880.1 | 27.941 | 340 | 224 | 9 | 29 | 353 | 7 | 340 | 9.52e-37 | 139 |
Msa0077660 | AT4G22880.2 | 27.941 | 340 | 224 | 9 | 29 | 353 | 7 | 340 | 9.52e-37 | 139 |
Msa0077660 | AT4G22880.3 | 27.941 | 340 | 224 | 9 | 29 | 353 | 7 | 340 | 9.52e-37 | 139 |
Msa0077660 | AT4G25420.1 | 30.225 | 311 | 200 | 4 | 49 | 346 | 41 | 347 | 1.22e-36 | 139 |
Msa0077660 | AT1G62380.1 | 32.584 | 267 | 156 | 11 | 60 | 316 | 2 | 254 | 2.98e-36 | 137 |
Msa0077660 | AT5G07200.1 | 31.310 | 313 | 178 | 9 | 47 | 335 | 36 | 335 | 5.84e-36 | 137 |
Msa0077660 | AT1G12010.1 | 31.461 | 267 | 159 | 10 | 60 | 316 | 2 | 254 | 1.44e-35 | 135 |
Msa0077660 | AT1G78550.2 | 27.402 | 281 | 189 | 6 | 98 | 370 | 5 | 278 | 1.85e-35 | 133 |
Msa0077660 | AT5G07480.1 | 29.766 | 299 | 188 | 7 | 67 | 351 | 44 | 334 | 2.86e-35 | 135 |
Msa0077660 | AT1G60980.1 | 30.723 | 332 | 196 | 9 | 47 | 354 | 35 | 356 | 3.31e-35 | 135 |
Msa0077660 | AT1G15550.1 | 29.305 | 331 | 186 | 12 | 53 | 359 | 43 | 349 | 5.39e-35 | 134 |
Msa0077660 | AT3G19000.2 | 29.885 | 261 | 159 | 6 | 47 | 288 | 14 | 269 | 6.43e-34 | 129 |
Msa0077660 | AT5G20400.1 | 26.957 | 345 | 225 | 8 | 20 | 355 | 7 | 333 | 1.09e-32 | 127 |
Msa0077660 | AT5G63590.1 | 29.766 | 299 | 186 | 9 | 63 | 349 | 10 | 296 | 2.26e-32 | 125 |
Msa0077660 | AT3G19010.3 | 30.132 | 302 | 177 | 10 | 47 | 343 | 14 | 286 | 2.60e-32 | 126 |
Msa0077660 | AT5G63600.1 | 29.063 | 320 | 193 | 11 | 49 | 352 | 15 | 316 | 6.41e-32 | 125 |
Msa0077660 | AT3G51240.2 | 33.880 | 183 | 115 | 2 | 139 | 315 | 25 | 207 | 1.54e-31 | 122 |
Msa0077660 | AT1G80330.1 | 31.003 | 329 | 177 | 13 | 66 | 367 | 48 | 353 | 3.65e-31 | 123 |
Msa0077660 | AT4G16330.1 | 30.275 | 218 | 141 | 4 | 152 | 365 | 43 | 253 | 4.52e-31 | 120 |
Msa0077660 | AT1G50960.1 | 30.483 | 269 | 183 | 4 | 62 | 328 | 35 | 301 | 4.89e-31 | 122 |
Msa0077660 | AT5G05600.2 | 29.054 | 296 | 189 | 8 | 1 | 288 | 8 | 290 | 7.04e-31 | 121 |
Msa0077660 | AT5G63600.2 | 28.972 | 321 | 193 | 12 | 49 | 352 | 15 | 317 | 8.51e-31 | 122 |
Msa0077660 | AT1G30040.1 | 29.043 | 303 | 169 | 10 | 66 | 346 | 30 | 308 | 2.76e-30 | 120 |
Msa0077660 | AT4G25420.2 | 30.233 | 258 | 166 | 3 | 49 | 293 | 41 | 297 | 2.82e-30 | 119 |
Msa0077660 | AT5G51810.1 | 29.299 | 314 | 195 | 6 | 49 | 346 | 43 | 345 | 5.34e-30 | 120 |
Msa0077660 | AT4G25310.2 | 26.989 | 352 | 205 | 13 | 29 | 370 | 16 | 325 | 1.01e-29 | 119 |
Msa0077660 | AT2G19590.1 | 30.545 | 275 | 160 | 12 | 53 | 316 | 3 | 257 | 1.15e-29 | 118 |
Msa0077660 | AT4G25300.2 | 29.839 | 248 | 149 | 5 | 145 | 370 | 18 | 262 | 3.12e-29 | 116 |
Msa0077660 | AT5G20550.1 | 25.697 | 323 | 228 | 7 | 44 | 358 | 22 | 340 | 5.70e-29 | 117 |
Msa0077660 | AT3G55970.2 | 29.682 | 283 | 178 | 8 | 17 | 289 | 12 | 283 | 6.83e-29 | 116 |
Msa0077660 | AT4G21690.1 | 29.794 | 339 | 200 | 14 | 49 | 369 | 30 | 348 | 4.15e-28 | 115 |
Msa0077660 | AT1G49390.1 | 26.136 | 352 | 218 | 12 | 20 | 354 | 7 | 333 | 5.86e-28 | 114 |
Msa0077660 | AT5G63595.1 | 30.526 | 285 | 147 | 11 | 41 | 311 | 2 | 249 | 1.03e-27 | 112 |
Msa0077660 | AT1G78440.1 | 27.586 | 319 | 186 | 11 | 67 | 362 | 18 | 314 | 2.57e-27 | 112 |
Msa0077660 | AT1G44090.1 | 28.267 | 329 | 209 | 8 | 67 | 376 | 63 | 383 | 1.58e-26 | 111 |
Msa0077660 | AT3G19010.2 | 27.099 | 262 | 162 | 7 | 47 | 289 | 14 | 265 | 5.03e-26 | 108 |
Msa0077660 | AT1G80340.1 | 40.278 | 144 | 79 | 3 | 227 | 369 | 209 | 346 | 3.80e-25 | 106 |
Msa0077660 | AT5G51810.2 | 29.323 | 266 | 162 | 5 | 40 | 291 | 40 | 293 | 3.96e-25 | 105 |
Msa0077660 | AT1G14120.2 | 28.179 | 291 | 172 | 12 | 67 | 343 | 8 | 275 | 1.50e-24 | 104 |
Msa0077660 | AT1G14120.1 | 28.179 | 291 | 172 | 12 | 67 | 343 | 8 | 275 | 1.50e-24 | 104 |
Msa0077660 | AT1G14120.3 | 28.179 | 291 | 172 | 12 | 67 | 343 | 8 | 275 | 1.50e-24 | 104 |
Msa0077660 | AT5G54000.2 | 27.597 | 308 | 191 | 9 | 64 | 355 | 43 | 334 | 1.55e-24 | 104 |
Msa0077660 | AT2G19590.2 | 31.154 | 260 | 138 | 11 | 78 | 316 | 3 | 242 | 2.23e-24 | 103 |
Msa0077660 | AT1G14130.1 | 26.282 | 312 | 195 | 12 | 67 | 365 | 9 | 298 | 3.28e-24 | 103 |
Msa0077660 | AT4G23340.1 | 29.132 | 357 | 203 | 15 | 59 | 399 | 2 | 324 | 4.24e-24 | 103 |
Msa0077660 | AT1G30040.2 | 28.571 | 245 | 132 | 9 | 66 | 288 | 30 | 253 | 3.89e-22 | 96.3 |
Msa0077660 | AT5G63580.2 | 29.185 | 233 | 145 | 7 | 66 | 288 | 18 | 240 | 1.25e-21 | 94.4 |
Msa0077660 | AT5G63580.1 | 29.694 | 229 | 141 | 7 | 66 | 284 | 18 | 236 | 1.59e-21 | 94.0 |
Msa0077660 | AT5G07480.2 | 28.879 | 232 | 143 | 7 | 134 | 351 | 2 | 225 | 2.30e-21 | 93.6 |
Msa0077660 | AT5G58660.1 | 26.119 | 268 | 165 | 7 | 69 | 305 | 26 | 291 | 2.51e-21 | 95.5 |
Msa0077660 | AT5G43935.1 | 25.574 | 305 | 183 | 9 | 67 | 359 | 19 | 291 | 2.66e-21 | 94.4 |
Msa0077660 | AT2G34555.1 | 27.217 | 327 | 198 | 10 | 67 | 372 | 27 | 334 | 5.75e-21 | 94.4 |
Msa0077660 | AT1G47990.1 | 29.254 | 335 | 173 | 15 | 67 | 369 | 15 | 317 | 6.36e-21 | 94.0 |
Msa0077660 | AT3G47190.1 | 25.914 | 301 | 156 | 12 | 53 | 315 | 14 | 285 | 5.80e-20 | 91.3 |
Msa0077660 | AT1G49390.2 | 25.556 | 270 | 168 | 11 | 102 | 354 | 1 | 254 | 6.52e-20 | 90.1 |
Msa0077660 | AT5G54000.1 | 26.667 | 270 | 166 | 9 | 102 | 355 | 1 | 254 | 1.49e-18 | 85.9 |
Msa0077660 | AT3G49620.1 | 24.843 | 318 | 206 | 8 | 40 | 332 | 13 | 322 | 1.45e-17 | 84.3 |
Msa0077660 | AT1G02400.1 | 27.660 | 329 | 182 | 15 | 61 | 360 | 18 | 319 | 1.48e-17 | 84.0 |
Msa0077660 | AT3G50210.4 | 25.556 | 270 | 181 | 5 | 83 | 332 | 32 | 301 | 5.49e-17 | 82.4 |
Msa0077660 | AT3G50210.1 | 25.556 | 270 | 181 | 5 | 83 | 332 | 32 | 301 | 5.49e-17 | 82.4 |
Msa0077660 | AT3G50210.3 | 25.556 | 270 | 181 | 5 | 83 | 332 | 32 | 301 | 5.49e-17 | 82.4 |
Msa0077660 | AT4G23340.2 | 30.928 | 194 | 109 | 7 | 211 | 399 | 33 | 206 | 8.71e-17 | 79.3 |
Msa0077660 | AT2G06960.1 | 36.232 | 138 | 71 | 4 | 220 | 357 | 25 | 145 | 2.25e-16 | 76.6 |
Msa0077660 | AT3G46500.5 | 28.094 | 299 | 179 | 11 | 66 | 342 | 16 | 300 | 5.57e-16 | 79.3 |
Msa0077660 | AT1G52820.1 | 30.270 | 185 | 123 | 4 | 186 | 368 | 134 | 314 | 1.01e-15 | 78.6 |
Msa0077660 | AT3G49630.3 | 24.915 | 293 | 202 | 6 | 57 | 332 | 2 | 293 | 1.42e-14 | 75.1 |
Msa0077660 | AT3G49630.1 | 25.283 | 265 | 181 | 5 | 84 | 332 | 34 | 297 | 2.24e-14 | 74.7 |
Msa0077660 | AT3G46500.7 | 27.413 | 259 | 156 | 9 | 66 | 302 | 16 | 264 | 1.95e-13 | 71.2 |
Msa0077660 | AT4G16765.3 | 31.214 | 173 | 104 | 6 | 180 | 342 | 60 | 227 | 3.71e-13 | 69.3 |
Msa0077660 | AT4G16765.6 | 30.387 | 181 | 113 | 6 | 180 | 349 | 60 | 238 | 8.54e-13 | 68.6 |
Msa0077660 | AT4G16765.1 | 30.387 | 181 | 113 | 6 | 180 | 349 | 60 | 238 | 8.54e-13 | 68.6 |
Msa0077660 | AT4G16765.2 | 30.387 | 181 | 113 | 6 | 180 | 349 | 60 | 238 | 8.54e-13 | 68.6 |
Msa0077660 | AT4G16765.5 | 35.000 | 120 | 69 | 4 | 237 | 349 | 75 | 192 | 3.27e-12 | 65.9 |
Msa0077660 | AT3G50210.2 | 29.814 | 161 | 102 | 5 | 169 | 322 | 53 | 209 | 4.05e-12 | 66.6 |
Msa0077660 | AT3G49630.2 | 29.940 | 167 | 109 | 5 | 169 | 332 | 63 | 224 | 4.74e-11 | 63.5 |
Msa0077660 | AT4G03070.1 | 24.233 | 326 | 213 | 11 | 62 | 368 | 9 | 319 | 5.85e-11 | 64.3 |
Find 113 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGATAATAATTCCTTTAT+TGG | 0.101087 | 1_2:-54616461 | None:intergenic |
ACTCTTCCTTGCACCCTTTC+AGG | 0.130980 | 1_2:+54616561 | Msa0077660:CDS |
TCTAAAATAATGACTTTAAT+TGG | 0.152850 | 1_2:+54617368 | Msa0077660:CDS |
ATTATAGTGTAAGGATTAAA+AGG | 0.193766 | 1_2:-54617043 | None:intergenic |
CATACTTGCGGTATTTCTTC+TGG | 0.229972 | 1_2:-54615729 | None:intergenic |
AGGATTAAAAGGGCTAATTT+TGG | 0.244650 | 1_2:-54617032 | None:intergenic |
AGAGATTTGGCCTTAGATTA+TGG | 0.266250 | 1_2:+54616019 | Msa0077660:CDS |
CCCATAGTTAATTCGGGTTC+AGG | 0.275729 | 1_2:-54616076 | None:intergenic |
AGAAGTTCCCATAGTTAATT+CGG | 0.282269 | 1_2:-54616083 | None:intergenic |
CCCTGAACCCGAATTAACTA+TGG | 0.283757 | 1_2:+54616075 | Msa0077660:CDS |
TCAAAGAAAGTAAGAGCTTT+AGG | 0.288431 | 1_2:+54615941 | Msa0077660:CDS |
ATCGGAGATCAAGTTCAAAT+TGG | 0.289399 | 1_2:-54615361 | None:intergenic |
GAGCTATTCTCAGAAGCTTT+AGG | 0.296118 | 1_2:+54615977 | Msa0077660:CDS |
AAGAAAATCCACCAATCTAT+AGG | 0.298151 | 1_2:+54616483 | Msa0077660:CDS |
TGGTATTCCGGTTAGTGTTT+TGG | 0.298579 | 1_2:+54615527 | Msa0077660:CDS |
CTTTCTCATCATGGAGTTAG+AGG | 0.301119 | 1_2:+54615206 | Msa0077660:exon |
TCCTTCTTACCTTAGAGATT+TGG | 0.304222 | 1_2:+54616006 | Msa0077660:CDS |
TGGCAGCAGGGTCCGTAAAA+AGG | 0.305500 | 1_2:-54615659 | None:intergenic |
AAAGTTCGATATTTCTCTAA+TGG | 0.338662 | 1_2:+54615633 | Msa0077660:CDS |
GAGAAATTGTCCATAATCTA+AGG | 0.338851 | 1_2:-54616029 | None:intergenic |
TCTTCTGGATTGGGAGGATC+GGG | 0.344839 | 1_2:-54615714 | None:intergenic |
TGTTCTATCATATGTGGAAT+TGG | 0.351395 | 1_2:-54615241 | None:intergenic |
TGCGGTATTTCTTCTGGATT+GGG | 0.351699 | 1_2:-54615723 | None:intergenic |
GATAAATCAATGGTTTCTAT+TGG | 0.359662 | 1_2:+54617260 | Msa0077660:CDS |
AGTGATTAATCATGGTATTC+CGG | 0.365484 | 1_2:+54615515 | Msa0077660:CDS |
TTGCGGTATTTCTTCTGGAT+TGG | 0.368792 | 1_2:-54615724 | None:intergenic |
CAAGGTCCTTGGTCCAATAA+AGG | 0.378696 | 1_2:+54616448 | Msa0077660:CDS |
AATCTAAGGCCAAATCTCTA+AGG | 0.387283 | 1_2:-54616015 | None:intergenic |
ATATCTTGAAGGTCTATGAT+AGG | 0.390808 | 1_2:-54615417 | None:intergenic |
TTCTTCTGGATTGGGAGGAT+CGG | 0.396249 | 1_2:-54615715 | None:intergenic |
GAAGTTCCCATAGTTAATTC+GGG | 0.398350 | 1_2:-54616082 | None:intergenic |
AAGTTCTTCATCAGAATCAA+TGG | 0.399345 | 1_2:+54616164 | Msa0077660:CDS |
TTTCTTCTACTTTCTCATCA+TGG | 0.403695 | 1_2:+54615197 | Msa0077660:exon |
ATCTCATCCAAAACACTAAC+CGG | 0.405079 | 1_2:-54615534 | None:intergenic |
ACTGTTAAGTGGACTATTAT+AGG | 0.415038 | 1_2:+54617236 | Msa0077660:CDS |
AGAAAATCCACCAATCTATA+GGG | 0.416314 | 1_2:+54616484 | Msa0077660:CDS |
TTACGGACCCTGCTGCCAAC+TGG | 0.424630 | 1_2:+54615664 | Msa0077660:CDS |
AATTGTCATGAAATCAATAT+CGG | 0.432971 | 1_2:-54616113 | None:intergenic |
GATGTCTCCATTATAGTGTA+AGG | 0.434101 | 1_2:-54617052 | None:intergenic |
TACTACTGTGAAAGAAGTCT+TGG | 0.435724 | 1_2:+54616508 | Msa0077660:CDS |
GATTAGTGTTTATATCTTGA+AGG | 0.437519 | 1_2:-54615428 | None:intergenic |
TCTTAATTCACAACCTGAAA+GGG | 0.442503 | 1_2:-54616574 | None:intergenic |
GAGTCCCTCCAGTTGGCAGC+AGG | 0.447236 | 1_2:-54615672 | None:intergenic |
TCAATCAATAAAGCTGTTAG+TGG | 0.455748 | 1_2:+54617073 | Msa0077660:CDS |
AGAATAGCTCAAAGATTGTC+AGG | 0.456408 | 1_2:-54615964 | None:intergenic |
AAGAAATACCGCAAGTATGC+AGG | 0.456431 | 1_2:+54615733 | Msa0077660:CDS |
GAATCAAAAGCCGGCGTGAA+AGG | 0.460942 | 1_2:+54615285 | Msa0077660:CDS |
AAGCTAGCTATAGAAACTCT+AGG | 0.464463 | 1_2:-54616398 | None:intergenic |
CCATAGTTAATTCGGGTTCA+GGG | 0.464838 | 1_2:-54616075 | None:intergenic |
ACAGTAGTATCCCTATAGAT+TGG | 0.466253 | 1_2:-54616494 | None:intergenic |
TAATAATGATGTGATTTGTT+TGG | 0.477051 | 1_2:+54617283 | Msa0077660:CDS |
GTGAAAGGCCTCTTAGAATC+TGG | 0.477165 | 1_2:+54615300 | Msa0077660:CDS |
GAACTTGAAGACCACCAATC+TGG | 0.479431 | 1_2:-54616147 | None:intergenic |
TTCTAAGAGGCCTTTCACGC+CGG | 0.481934 | 1_2:-54615295 | None:intergenic |
CTCTAAGGTAAGAAGGATCA+AGG | 0.482272 | 1_2:-54616000 | None:intergenic |
CTTTATTGGACCAAGGACCT+TGG | 0.485130 | 1_2:-54616447 | None:intergenic |
TATTATAGGCGATAAATCAA+TGG | 0.485639 | 1_2:+54617250 | Msa0077660:CDS |
CAAGGAAACCATTCTATACA+AGG | 0.487279 | 1_2:+54615598 | Msa0077660:CDS |
TCGGAGATCAAGTTCAAATT+GGG | 0.487470 | 1_2:-54615360 | None:intergenic |
TTCTTAATTCACAACCTGAA+AGG | 0.489670 | 1_2:-54616575 | None:intergenic |
GCCAAATCTCTAAGGTAAGA+AGG | 0.493665 | 1_2:-54616007 | None:intergenic |
GAAGATTCGAAGTGCATGTA+AGG | 0.497098 | 1_2:+54615476 | Msa0077660:CDS |
AGTTCTTCATCAGAATCAAT+GGG | 0.501988 | 1_2:+54616165 | Msa0077660:CDS |
GAGGTTTCATCCAAGGTCCT+TGG | 0.508636 | 1_2:+54616437 | Msa0077660:CDS |
TATGATAGGGACACTGAACT+TGG | 0.510446 | 1_2:-54615403 | None:intergenic |
TATCTTGAAGGTCTATGATA+GGG | 0.518400 | 1_2:-54615416 | None:intergenic |
TGTTCACAAGTGTTTATCAC+CGG | 0.530213 | 1_2:+54616354 | Msa0077660:CDS |
GTTGATGTTCCTCCTCTGCA+TGG | 0.531261 | 1_2:+54616187 | Msa0077660:CDS |
TACATATTCCAGATTCTAAG+AGG | 0.531431 | 1_2:-54615308 | None:intergenic |
ATTCTTCTACAAGACCAGAT+TGG | 0.532764 | 1_2:+54616133 | Msa0077660:CDS |
AAACATTGGTGATCTTCTGC+AGG | 0.532811 | 1_2:+54616222 | Msa0077660:CDS |
TTCCACTGTTCTATCATATG+TGG | 0.534025 | 1_2:-54615247 | None:intergenic |
AGTCCCTCCAGTTGGCAGCA+GGG | 0.536596 | 1_2:-54615671 | None:intergenic |
TAATCCATGTTTACATGTTG+AGG | 0.536783 | 1_2:+54615446 | Msa0077660:CDS |
AGATGCTTCACTTTCATGAT+CGG | 0.537892 | 1_2:-54615379 | None:intergenic |
TCGAAGTGCATGTAAGGAGT+GGG | 0.538796 | 1_2:+54615482 | Msa0077660:CDS |
AATTCGGGTTCAGGGCATGC+AGG | 0.539005 | 1_2:-54616067 | None:intergenic |
GCCTTTGAAGAATCAAAAGC+CGG | 0.543063 | 1_2:+54615276 | Msa0077660:CDS |
ACTACTGTGAAAGAAGTCTT+GGG | 0.544052 | 1_2:+54616509 | Msa0077660:CDS |
CTTCTTTGCAAACTCAGTAG+AGG | 0.552479 | 1_2:+54616418 | Msa0077660:CDS |
TTATAGTGTAAGGATTAAAA+GGG | 0.564195 | 1_2:-54617042 | None:intergenic |
CTTCTGGATTGGGAGGATCG+GGG | 0.565105 | 1_2:-54615713 | None:intergenic |
GCAAGGAAGAGTTCCCATCA+AGG | 0.565323 | 1_2:-54616550 | None:intergenic |
AGCTAGCTATAGAAACTCTA+GGG | 0.565764 | 1_2:-54616397 | None:intergenic |
CATCTTGTTCATGAAACCTA+CGG | 0.566748 | 1_2:-54615569 | None:intergenic |
CTCAGTAGAGGTTTCATCCA+AGG | 0.567334 | 1_2:+54616430 | Msa0077660:CDS |
TACAGAATGAGACTGTTAAG+TGG | 0.568883 | 1_2:+54617225 | Msa0077660:intron |
GCTGCAAAAGCATCTCAAGT+TGG | 0.571712 | 1_2:+54617329 | Msa0077660:CDS |
CTTCTACAAGACCAGATTGG+TGG | 0.574735 | 1_2:+54616136 | Msa0077660:CDS |
ATAATTCCTTTATTGGACCA+AGG | 0.587453 | 1_2:-54616454 | None:intergenic |
CGGACCCTGCTGCCAACTGG+AGG | 0.587707 | 1_2:+54615667 | Msa0077660:CDS |
ATGAACAAGATGCTGATGCA+AGG | 0.589480 | 1_2:+54615580 | Msa0077660:CDS |
TCACAACCTGAAAGGGTGCA+AGG | 0.591043 | 1_2:-54616567 | None:intergenic |
GGATCTCTTGTTGTAAACAT+TGG | 0.594751 | 1_2:+54616208 | Msa0077660:CDS |
ATGGAGTTAGAGGCAAGTAA+AGG | 0.595590 | 1_2:+54615216 | Msa0077660:CDS |
TTCGAAGTGCATGTAAGGAG+TGG | 0.595798 | 1_2:+54615481 | Msa0077660:CDS |
CCTGAACCCGAATTAACTAT+GGG | 0.596387 | 1_2:+54616076 | Msa0077660:CDS |
CTATATGCTTCGATAAAACC+CGG | 0.600515 | 1_2:-54616373 | None:intergenic |
GTAGTATCCCTATAGATTGG+TGG | 0.600698 | 1_2:-54616491 | None:intergenic |
GGTATTTCTTCTGGATTGGG+AGG | 0.605051 | 1_2:-54615720 | None:intergenic |
TTGGGAGAATGAAACATGCG+TGG | 0.610879 | 1_2:-54615342 | None:intergenic |
TGAAAGTGAGTCCCTCCAGT+TGG | 0.622368 | 1_2:-54615679 | None:intergenic |
GGACCCTGCTGCCAACTGGA+GGG | 0.624510 | 1_2:+54615668 | Msa0077660:CDS |
AGTACCTCAACATGTAAACA+TGG | 0.631590 | 1_2:-54615450 | None:intergenic |
AGATGATTAGTGGAATCCGT+AGG | 0.632212 | 1_2:+54615553 | Msa0077660:CDS |
TAACATTACCTGCATACTTG+CGG | 0.634719 | 1_2:-54615741 | None:intergenic |
GTTCACAAGTGTTTATCACC+GGG | 0.640346 | 1_2:+54616355 | Msa0077660:CDS |
CGAAGTGCATGTAAGGAGTG+GGG | 0.653285 | 1_2:+54615483 | Msa0077660:CDS |
TGGGAGAATGAAACATGCGT+GGG | 0.654406 | 1_2:-54615341 | None:intergenic |
AAGGAAACCATTCTATACAA+GGG | 0.666588 | 1_2:+54615599 | Msa0077660:CDS |
ACAAGAGATCCATGCAGAGG+AGG | 0.681103 | 1_2:-54616196 | None:intergenic |
ACAACAAGAGATCCATGCAG+AGG | 0.698408 | 1_2:-54616199 | None:intergenic |
TTCCACATATGATAGAACAG+TGG | 0.718159 | 1_2:+54615245 | Msa0077660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATGTTAGTTTTATATCTTT+TGG | + | chr1_2:54615757-54615776 | Msa0077660:intron | 15.0% |
!!! | TTAATAACTTTCATTTTCTT+TGG | + | chr1_2:54616788-54616807 | Msa0077660:intron | 15.0% |
!! | TAATCAAAGTTCAAATTATA+AGG | - | chr1_2:54616836-54616855 | None:intergenic | 15.0% |
!!! | ATTTTTGTGTATAGATAAAA+GGG | - | chr1_2:54616999-54617018 | None:intergenic | 15.0% |
!!! | TCTAAAATAATGACTTTAAT+TGG | + | chr1_2:54617368-54617387 | Msa0077660:CDS | 15.0% |
!!! | AATGTTAGTTTTATATCTTT+TGG | + | chr1_2:54615757-54615776 | Msa0077660:intron | 15.0% |
!!! | TTAATAACTTTCATTTTCTT+TGG | + | chr1_2:54616788-54616807 | Msa0077660:intron | 15.0% |
!! | TAATCAAAGTTCAAATTATA+AGG | - | chr1_2:54616836-54616855 | None:intergenic | 15.0% |
!!! | ATTTTTGTGTATAGATAAAA+GGG | - | chr1_2:54616999-54617018 | None:intergenic | 15.0% |
!!! | TCTAAAATAATGACTTTAAT+TGG | + | chr1_2:54617368-54617387 | Msa0077660:CDS | 15.0% |
!!! | TTTTTTCAAGTGATTAATCA+TGG | + | chr1_2:54615507-54615526 | Msa0077660:CDS | 20.0% |
!!! | TAGTTTTATATCTTTTGGAT+CGG | + | chr1_2:54615762-54615781 | Msa0077660:intron | 20.0% |
!! | AATTGTCATGAAATCAATAT+CGG | - | chr1_2:54616116-54616135 | None:intergenic | 20.0% |
!! | TCTGATAATAATTCCTTTAT+TGG | - | chr1_2:54616464-54616483 | None:intergenic | 20.0% |
!! | TTGTGAATTAAGAATTAGTA+TGG | + | chr1_2:54616584-54616603 | Msa0077660:intron | 20.0% |
!!! | TTTAGTCTTGCATTTTATTA+TGG | + | chr1_2:54616643-54616662 | Msa0077660:intron | 20.0% |
!!! | CATTTTTGTGTATAGATAAA+AGG | - | chr1_2:54617000-54617019 | None:intergenic | 20.0% |
!!! | CTTTTATCTATACACAAAAA+TGG | + | chr1_2:54616998-54617017 | Msa0077660:CDS | 20.0% |
!! | TTATAGTGTAAGGATTAAAA+GGG | - | chr1_2:54617045-54617064 | None:intergenic | 20.0% |
!! | ATTATAGTGTAAGGATTAAA+AGG | - | chr1_2:54617046-54617065 | None:intergenic | 20.0% |
!!! | TTTTAATCCTTACACTATAA+TGG | + | chr1_2:54617045-54617064 | Msa0077660:CDS | 20.0% |
!!! | ATAGCTAGGTTTTTTAATAA+TGG | + | chr1_2:54617172-54617191 | Msa0077660:intron | 20.0% |
!!! | TAGCTAGGTTTTTTAATAAT+GGG | + | chr1_2:54617173-54617192 | Msa0077660:intron | 20.0% |
!!! | TAATAATGATGTGATTTGTT+TGG | + | chr1_2:54617283-54617302 | Msa0077660:CDS | 20.0% |
!!! | TTTTTTCAAGTGATTAATCA+TGG | + | chr1_2:54615507-54615526 | Msa0077660:CDS | 20.0% |
!!! | TAGTTTTATATCTTTTGGAT+CGG | + | chr1_2:54615762-54615781 | Msa0077660:intron | 20.0% |
!! | AATTGTCATGAAATCAATAT+CGG | - | chr1_2:54616116-54616135 | None:intergenic | 20.0% |
!! | TCTGATAATAATTCCTTTAT+TGG | - | chr1_2:54616464-54616483 | None:intergenic | 20.0% |
!! | TTGTGAATTAAGAATTAGTA+TGG | + | chr1_2:54616584-54616603 | Msa0077660:intron | 20.0% |
!!! | TTTAGTCTTGCATTTTATTA+TGG | + | chr1_2:54616643-54616662 | Msa0077660:intron | 20.0% |
!!! | CATTTTTGTGTATAGATAAA+AGG | - | chr1_2:54617000-54617019 | None:intergenic | 20.0% |
!!! | CTTTTATCTATACACAAAAA+TGG | + | chr1_2:54616998-54617017 | Msa0077660:CDS | 20.0% |
!! | TTATAGTGTAAGGATTAAAA+GGG | - | chr1_2:54617045-54617064 | None:intergenic | 20.0% |
!! | ATTATAGTGTAAGGATTAAA+AGG | - | chr1_2:54617046-54617065 | None:intergenic | 20.0% |
!!! | TTTTAATCCTTACACTATAA+TGG | + | chr1_2:54617045-54617064 | Msa0077660:CDS | 20.0% |
!!! | ATAGCTAGGTTTTTTAATAA+TGG | + | chr1_2:54617172-54617191 | Msa0077660:intron | 20.0% |
!!! | TAGCTAGGTTTTTTAATAAT+GGG | + | chr1_2:54617173-54617192 | Msa0077660:intron | 20.0% |
!!! | TAATAATGATGTGATTTGTT+TGG | + | chr1_2:54617283-54617302 | Msa0077660:CDS | 20.0% |
! | GATTAGTGTTTATATCTTGA+AGG | - | chr1_2:54615431-54615450 | None:intergenic | 25.0% |
! | AAAGTTCGATATTTCTCTAA+TGG | + | chr1_2:54615633-54615652 | Msa0077660:CDS | 25.0% |
!!! | AGTTTTATATCTTTTGGATC+GGG | + | chr1_2:54615763-54615782 | Msa0077660:intron | 25.0% |
! | TTGATGAGATGATTATGTAT+TGG | + | chr1_2:54615896-54615915 | Msa0077660:intron | 25.0% |
!!! | TTGGGACATTATTTTACAAA+AGG | + | chr1_2:54616527-54616546 | Msa0077660:CDS | 25.0% |
!! | ACACTTTTAATATGAAGTGT+TGG | - | chr1_2:54616754-54616773 | None:intergenic | 25.0% |
! | AAGTTATTAAATGTAACCAC+AGG | - | chr1_2:54616778-54616797 | None:intergenic | 25.0% |
!! | TTAAAGGAGGTGTAAAAATA+AGG | - | chr1_2:54616868-54616887 | None:intergenic | 25.0% |
! | AAAACAGTTGAGTATTTCAT+TGG | + | chr1_2:54616926-54616945 | Msa0077660:intron | 25.0% |
!! | TCTATACACAAAAATGGATT+TGG | + | chr1_2:54617004-54617023 | Msa0077660:CDS | 25.0% |
! | TGTAACACTAGAACAATATT+AGG | - | chr1_2:54617209-54617228 | None:intergenic | 25.0% |
! | TATTATAGGCGATAAATCAA+TGG | + | chr1_2:54617250-54617269 | Msa0077660:CDS | 25.0% |
! | GATAAATCAATGGTTTCTAT+TGG | + | chr1_2:54617260-54617279 | Msa0077660:CDS | 25.0% |
!!! | TGTGATTTGTTTGGTATTTT+TGG | + | chr1_2:54617292-54617311 | Msa0077660:CDS | 25.0% |
! | GATTAGTGTTTATATCTTGA+AGG | - | chr1_2:54615431-54615450 | None:intergenic | 25.0% |
! | AAAGTTCGATATTTCTCTAA+TGG | + | chr1_2:54615633-54615652 | Msa0077660:CDS | 25.0% |
!!! | AGTTTTATATCTTTTGGATC+GGG | + | chr1_2:54615763-54615782 | Msa0077660:intron | 25.0% |
! | TTGATGAGATGATTATGTAT+TGG | + | chr1_2:54615896-54615915 | Msa0077660:intron | 25.0% |
!!! | TTGGGACATTATTTTACAAA+AGG | + | chr1_2:54616527-54616546 | Msa0077660:CDS | 25.0% |
!! | ACACTTTTAATATGAAGTGT+TGG | - | chr1_2:54616754-54616773 | None:intergenic | 25.0% |
! | AAGTTATTAAATGTAACCAC+AGG | - | chr1_2:54616778-54616797 | None:intergenic | 25.0% |
!! | TTAAAGGAGGTGTAAAAATA+AGG | - | chr1_2:54616868-54616887 | None:intergenic | 25.0% |
! | AAAACAGTTGAGTATTTCAT+TGG | + | chr1_2:54616926-54616945 | Msa0077660:intron | 25.0% |
!! | TCTATACACAAAAATGGATT+TGG | + | chr1_2:54617004-54617023 | Msa0077660:CDS | 25.0% |
! | TGTAACACTAGAACAATATT+AGG | - | chr1_2:54617209-54617228 | None:intergenic | 25.0% |
! | TATTATAGGCGATAAATCAA+TGG | + | chr1_2:54617250-54617269 | Msa0077660:CDS | 25.0% |
! | GATAAATCAATGGTTTCTAT+TGG | + | chr1_2:54617260-54617279 | Msa0077660:CDS | 25.0% |
!!! | TGTGATTTGTTTGGTATTTT+TGG | + | chr1_2:54617292-54617311 | Msa0077660:CDS | 25.0% |
TTTCTTCTACTTTCTCATCA+TGG | + | chr1_2:54615197-54615216 | Msa0077660:exon | 30.0% | |
TGTTCTATCATATGTGGAAT+TGG | - | chr1_2:54615244-54615263 | None:intergenic | 30.0% | |
TACATATTCCAGATTCTAAG+AGG | - | chr1_2:54615311-54615330 | None:intergenic | 30.0% | |
TATCTTGAAGGTCTATGATA+GGG | - | chr1_2:54615419-54615438 | None:intergenic | 30.0% | |
ATATCTTGAAGGTCTATGAT+AGG | - | chr1_2:54615420-54615439 | None:intergenic | 30.0% | |
TAATCCATGTTTACATGTTG+AGG | + | chr1_2:54615446-54615465 | Msa0077660:CDS | 30.0% | |
AGTGATTAATCATGGTATTC+CGG | + | chr1_2:54615515-54615534 | Msa0077660:CDS | 30.0% | |
AAGGAAACCATTCTATACAA+GGG | + | chr1_2:54615599-54615618 | Msa0077660:CDS | 30.0% | |
! | CTTTTATCCCTTGTATAGAA+TGG | - | chr1_2:54615609-54615628 | None:intergenic | 30.0% |
TAATCATCTCATCAAAGACA+AGG | - | chr1_2:54615891-54615910 | None:intergenic | 30.0% | |
TCAAAGAAAGTAAGAGCTTT+AGG | + | chr1_2:54615941-54615960 | Msa0077660:CDS | 30.0% | |
GAGAAATTGTCCATAATCTA+AGG | - | chr1_2:54616032-54616051 | None:intergenic | 30.0% | |
AGAAGTTCCCATAGTTAATT+CGG | - | chr1_2:54616086-54616105 | None:intergenic | 30.0% | |
AAGTTCTTCATCAGAATCAA+TGG | + | chr1_2:54616164-54616183 | Msa0077660:CDS | 30.0% | |
AGTTCTTCATCAGAATCAAT+GGG | + | chr1_2:54616165-54616184 | Msa0077660:CDS | 30.0% | |
ATAATTCCTTTATTGGACCA+AGG | - | chr1_2:54616457-54616476 | None:intergenic | 30.0% | |
AAGAAAATCCACCAATCTAT+AGG | + | chr1_2:54616483-54616502 | Msa0077660:CDS | 30.0% | |
AGAAAATCCACCAATCTATA+GGG | + | chr1_2:54616484-54616503 | Msa0077660:CDS | 30.0% | |
! | TATTTTACAAAAGGCCTTGA+TGG | + | chr1_2:54616536-54616555 | Msa0077660:CDS | 30.0% |
! | ATTTTACAAAAGGCCTTGAT+GGG | + | chr1_2:54616537-54616556 | Msa0077660:CDS | 30.0% |
TCTTAATTCACAACCTGAAA+GGG | - | chr1_2:54616577-54616596 | None:intergenic | 30.0% | |
TTCTTAATTCACAACCTGAA+AGG | - | chr1_2:54616578-54616597 | None:intergenic | 30.0% | |
! | TCATATTAAAAGTGTACCTG+TGG | + | chr1_2:54616759-54616778 | Msa0077660:intron | 30.0% |
! | AATAACTTGTAGTGCTAACA+GGG | - | chr1_2:54616895-54616914 | None:intergenic | 30.0% |
! | AAATAACTTGTAGTGCTAAC+AGG | - | chr1_2:54616896-54616915 | None:intergenic | 30.0% |
!! | AGCACTACAAGTTATTTCTT+AGG | + | chr1_2:54616899-54616918 | Msa0077660:intron | 30.0% |
! | ATACACAAAAATGGATTTGG+TGG | + | chr1_2:54617007-54617026 | Msa0077660:CDS | 30.0% |
! | AGGATTAAAAGGGCTAATTT+TGG | - | chr1_2:54617035-54617054 | None:intergenic | 30.0% |
TCAATCAATAAAGCTGTTAG+TGG | + | chr1_2:54617073-54617092 | Msa0077660:CDS | 30.0% | |
!!! | GGTTTTTTAATAATGGGAAC+TGG | + | chr1_2:54617179-54617198 | Msa0077660:intron | 30.0% |
!! | ACTGTTAAGTGGACTATTAT+AGG | + | chr1_2:54617236-54617255 | Msa0077660:CDS | 30.0% |
TTTCTTCTACTTTCTCATCA+TGG | + | chr1_2:54615197-54615216 | Msa0077660:exon | 30.0% | |
TGTTCTATCATATGTGGAAT+TGG | - | chr1_2:54615244-54615263 | None:intergenic | 30.0% | |
TACATATTCCAGATTCTAAG+AGG | - | chr1_2:54615311-54615330 | None:intergenic | 30.0% | |
TATCTTGAAGGTCTATGATA+GGG | - | chr1_2:54615419-54615438 | None:intergenic | 30.0% | |
ATATCTTGAAGGTCTATGAT+AGG | - | chr1_2:54615420-54615439 | None:intergenic | 30.0% | |
TAATCCATGTTTACATGTTG+AGG | + | chr1_2:54615446-54615465 | Msa0077660:CDS | 30.0% | |
AGTGATTAATCATGGTATTC+CGG | + | chr1_2:54615515-54615534 | Msa0077660:CDS | 30.0% | |
AAGGAAACCATTCTATACAA+GGG | + | chr1_2:54615599-54615618 | Msa0077660:CDS | 30.0% | |
! | CTTTTATCCCTTGTATAGAA+TGG | - | chr1_2:54615609-54615628 | None:intergenic | 30.0% |
TAATCATCTCATCAAAGACA+AGG | - | chr1_2:54615891-54615910 | None:intergenic | 30.0% | |
TCAAAGAAAGTAAGAGCTTT+AGG | + | chr1_2:54615941-54615960 | Msa0077660:CDS | 30.0% | |
GAGAAATTGTCCATAATCTA+AGG | - | chr1_2:54616032-54616051 | None:intergenic | 30.0% | |
AGAAGTTCCCATAGTTAATT+CGG | - | chr1_2:54616086-54616105 | None:intergenic | 30.0% | |
AAGTTCTTCATCAGAATCAA+TGG | + | chr1_2:54616164-54616183 | Msa0077660:CDS | 30.0% | |
AGTTCTTCATCAGAATCAAT+GGG | + | chr1_2:54616165-54616184 | Msa0077660:CDS | 30.0% | |
ATAATTCCTTTATTGGACCA+AGG | - | chr1_2:54616457-54616476 | None:intergenic | 30.0% | |
AAGAAAATCCACCAATCTAT+AGG | + | chr1_2:54616483-54616502 | Msa0077660:CDS | 30.0% | |
AGAAAATCCACCAATCTATA+GGG | + | chr1_2:54616484-54616503 | Msa0077660:CDS | 30.0% | |
! | TATTTTACAAAAGGCCTTGA+TGG | + | chr1_2:54616536-54616555 | Msa0077660:CDS | 30.0% |
! | ATTTTACAAAAGGCCTTGAT+GGG | + | chr1_2:54616537-54616556 | Msa0077660:CDS | 30.0% |
TCTTAATTCACAACCTGAAA+GGG | - | chr1_2:54616577-54616596 | None:intergenic | 30.0% | |
TTCTTAATTCACAACCTGAA+AGG | - | chr1_2:54616578-54616597 | None:intergenic | 30.0% | |
! | TCATATTAAAAGTGTACCTG+TGG | + | chr1_2:54616759-54616778 | Msa0077660:intron | 30.0% |
! | AATAACTTGTAGTGCTAACA+GGG | - | chr1_2:54616895-54616914 | None:intergenic | 30.0% |
! | AAATAACTTGTAGTGCTAAC+AGG | - | chr1_2:54616896-54616915 | None:intergenic | 30.0% |
!! | AGCACTACAAGTTATTTCTT+AGG | + | chr1_2:54616899-54616918 | Msa0077660:intron | 30.0% |
! | ATACACAAAAATGGATTTGG+TGG | + | chr1_2:54617007-54617026 | Msa0077660:CDS | 30.0% |
! | AGGATTAAAAGGGCTAATTT+TGG | - | chr1_2:54617035-54617054 | None:intergenic | 30.0% |
TCAATCAATAAAGCTGTTAG+TGG | + | chr1_2:54617073-54617092 | Msa0077660:CDS | 30.0% | |
!!! | GGTTTTTTAATAATGGGAAC+TGG | + | chr1_2:54617179-54617198 | Msa0077660:intron | 30.0% |
!! | ACTGTTAAGTGGACTATTAT+AGG | + | chr1_2:54617236-54617255 | Msa0077660:CDS | 30.0% |
TTCCACATATGATAGAACAG+TGG | + | chr1_2:54615245-54615264 | Msa0077660:CDS | 35.0% | |
TTCCACTGTTCTATCATATG+TGG | - | chr1_2:54615250-54615269 | None:intergenic | 35.0% | |
TCGGAGATCAAGTTCAAATT+GGG | - | chr1_2:54615363-54615382 | None:intergenic | 35.0% | |
ATCGGAGATCAAGTTCAAAT+TGG | - | chr1_2:54615364-54615383 | None:intergenic | 35.0% | |
AGATGCTTCACTTTCATGAT+CGG | - | chr1_2:54615382-54615401 | None:intergenic | 35.0% | |
AGTACCTCAACATGTAAACA+TGG | - | chr1_2:54615453-54615472 | None:intergenic | 35.0% | |
ATCTCATCCAAAACACTAAC+CGG | - | chr1_2:54615537-54615556 | None:intergenic | 35.0% | |
!! | GTTTTGGATGAGATGATTAG+TGG | + | chr1_2:54615543-54615562 | Msa0077660:CDS | 35.0% |
CATCTTGTTCATGAAACCTA+CGG | - | chr1_2:54615572-54615591 | None:intergenic | 35.0% | |
CAAGGAAACCATTCTATACA+AGG | + | chr1_2:54615598-54615617 | Msa0077660:CDS | 35.0% | |
! | CTCTAATGGTAGCCTTTTTA+CGG | + | chr1_2:54615647-54615666 | Msa0077660:CDS | 35.0% |
TAACATTACCTGCATACTTG+CGG | - | chr1_2:54615744-54615763 | None:intergenic | 35.0% | |
AGAATAGCTCAAAGATTGTC+AGG | - | chr1_2:54615967-54615986 | None:intergenic | 35.0% | |
TCCTTCTTACCTTAGAGATT+TGG | + | chr1_2:54616006-54616025 | Msa0077660:CDS | 35.0% | |
! | AATCTAAGGCCAAATCTCTA+AGG | - | chr1_2:54616018-54616037 | None:intergenic | 35.0% |
!! | AGAGATTTGGCCTTAGATTA+TGG | + | chr1_2:54616019-54616038 | Msa0077660:CDS | 35.0% |
GAAGTTCCCATAGTTAATTC+GGG | - | chr1_2:54616085-54616104 | None:intergenic | 35.0% | |
ATTCTTCTACAAGACCAGAT+TGG | + | chr1_2:54616133-54616152 | Msa0077660:CDS | 35.0% | |
! | GGATCTCTTGTTGTAAACAT+TGG | + | chr1_2:54616208-54616227 | Msa0077660:CDS | 35.0% |
GATGTTAAGTGTAAACACGT+TGG | + | chr1_2:54616250-54616269 | Msa0077660:intron | 35.0% | |
TGTTCACAAGTGTTTATCAC+CGG | + | chr1_2:54616354-54616373 | Msa0077660:CDS | 35.0% | |
CTATATGCTTCGATAAAACC+CGG | - | chr1_2:54616376-54616395 | None:intergenic | 35.0% | |
AGCTAGCTATAGAAACTCTA+GGG | - | chr1_2:54616400-54616419 | None:intergenic | 35.0% | |
AAGCTAGCTATAGAAACTCT+AGG | - | chr1_2:54616401-54616420 | None:intergenic | 35.0% | |
ACAGTAGTATCCCTATAGAT+TGG | - | chr1_2:54616497-54616516 | None:intergenic | 35.0% | |
TACTACTGTGAAAGAAGTCT+TGG | + | chr1_2:54616508-54616527 | Msa0077660:CDS | 35.0% | |
ACTACTGTGAAAGAAGTCTT+GGG | + | chr1_2:54616509-54616528 | Msa0077660:CDS | 35.0% | |
!! | ATCAATTGTTGTGGTGTTGT+TGG | + | chr1_2:54616613-54616632 | Msa0077660:intron | 35.0% |
GATGTCTCCATTATAGTGTA+AGG | - | chr1_2:54617055-54617074 | None:intergenic | 35.0% | |
GTTGCAAAACATGTTCCAAA+TGG | - | chr1_2:54617145-54617164 | None:intergenic | 35.0% | |
TTGCAACAAAAGACATAGCT+AGG | + | chr1_2:54617158-54617177 | Msa0077660:intron | 35.0% | |
TACAGAATGAGACTGTTAAG+TGG | + | chr1_2:54617225-54617244 | Msa0077660:intron | 35.0% | |
!!! | TGTTTGGTATTTTTGGATGC+TGG | + | chr1_2:54617299-54617318 | Msa0077660:CDS | 35.0% |
TTCCACATATGATAGAACAG+TGG | + | chr1_2:54615245-54615264 | Msa0077660:CDS | 35.0% | |
TTCCACTGTTCTATCATATG+TGG | - | chr1_2:54615250-54615269 | None:intergenic | 35.0% | |
TCGGAGATCAAGTTCAAATT+GGG | - | chr1_2:54615363-54615382 | None:intergenic | 35.0% | |
ATCGGAGATCAAGTTCAAAT+TGG | - | chr1_2:54615364-54615383 | None:intergenic | 35.0% | |
AGATGCTTCACTTTCATGAT+CGG | - | chr1_2:54615382-54615401 | None:intergenic | 35.0% | |
AGTACCTCAACATGTAAACA+TGG | - | chr1_2:54615453-54615472 | None:intergenic | 35.0% | |
ATCTCATCCAAAACACTAAC+CGG | - | chr1_2:54615537-54615556 | None:intergenic | 35.0% | |
!! | GTTTTGGATGAGATGATTAG+TGG | + | chr1_2:54615543-54615562 | Msa0077660:CDS | 35.0% |
CATCTTGTTCATGAAACCTA+CGG | - | chr1_2:54615572-54615591 | None:intergenic | 35.0% | |
CAAGGAAACCATTCTATACA+AGG | + | chr1_2:54615598-54615617 | Msa0077660:CDS | 35.0% | |
! | CTCTAATGGTAGCCTTTTTA+CGG | + | chr1_2:54615647-54615666 | Msa0077660:CDS | 35.0% |
TAACATTACCTGCATACTTG+CGG | - | chr1_2:54615744-54615763 | None:intergenic | 35.0% | |
AGAATAGCTCAAAGATTGTC+AGG | - | chr1_2:54615967-54615986 | None:intergenic | 35.0% | |
TCCTTCTTACCTTAGAGATT+TGG | + | chr1_2:54616006-54616025 | Msa0077660:CDS | 35.0% | |
! | AATCTAAGGCCAAATCTCTA+AGG | - | chr1_2:54616018-54616037 | None:intergenic | 35.0% |
!! | AGAGATTTGGCCTTAGATTA+TGG | + | chr1_2:54616019-54616038 | Msa0077660:CDS | 35.0% |
GAAGTTCCCATAGTTAATTC+GGG | - | chr1_2:54616085-54616104 | None:intergenic | 35.0% | |
ATTCTTCTACAAGACCAGAT+TGG | + | chr1_2:54616133-54616152 | Msa0077660:CDS | 35.0% | |
! | GGATCTCTTGTTGTAAACAT+TGG | + | chr1_2:54616208-54616227 | Msa0077660:CDS | 35.0% |
GATGTTAAGTGTAAACACGT+TGG | + | chr1_2:54616250-54616269 | Msa0077660:intron | 35.0% | |
TGTTCACAAGTGTTTATCAC+CGG | + | chr1_2:54616354-54616373 | Msa0077660:CDS | 35.0% | |
CTATATGCTTCGATAAAACC+CGG | - | chr1_2:54616376-54616395 | None:intergenic | 35.0% | |
AGCTAGCTATAGAAACTCTA+GGG | - | chr1_2:54616400-54616419 | None:intergenic | 35.0% | |
AAGCTAGCTATAGAAACTCT+AGG | - | chr1_2:54616401-54616420 | None:intergenic | 35.0% | |
ACAGTAGTATCCCTATAGAT+TGG | - | chr1_2:54616497-54616516 | None:intergenic | 35.0% | |
TACTACTGTGAAAGAAGTCT+TGG | + | chr1_2:54616508-54616527 | Msa0077660:CDS | 35.0% | |
ACTACTGTGAAAGAAGTCTT+GGG | + | chr1_2:54616509-54616528 | Msa0077660:CDS | 35.0% | |
!! | ATCAATTGTTGTGGTGTTGT+TGG | + | chr1_2:54616613-54616632 | Msa0077660:intron | 35.0% |
GATGTCTCCATTATAGTGTA+AGG | - | chr1_2:54617055-54617074 | None:intergenic | 35.0% | |
GTTGCAAAACATGTTCCAAA+TGG | - | chr1_2:54617145-54617164 | None:intergenic | 35.0% | |
TTGCAACAAAAGACATAGCT+AGG | + | chr1_2:54617158-54617177 | Msa0077660:intron | 35.0% | |
TACAGAATGAGACTGTTAAG+TGG | + | chr1_2:54617225-54617244 | Msa0077660:intron | 35.0% | |
!!! | TGTTTGGTATTTTTGGATGC+TGG | + | chr1_2:54617299-54617318 | Msa0077660:CDS | 35.0% |
CTTTCTCATCATGGAGTTAG+AGG | + | chr1_2:54615206-54615225 | Msa0077660:exon | 40.0% | |
ATGGAGTTAGAGGCAAGTAA+AGG | + | chr1_2:54615216-54615235 | Msa0077660:CDS | 40.0% | |
! | GCCTTTGAAGAATCAAAAGC+CGG | + | chr1_2:54615276-54615295 | Msa0077660:CDS | 40.0% |
TATGATAGGGACACTGAACT+TGG | - | chr1_2:54615406-54615425 | None:intergenic | 40.0% | |
GAAGATTCGAAGTGCATGTA+AGG | + | chr1_2:54615476-54615495 | Msa0077660:CDS | 40.0% | |
! | TGGTATTCCGGTTAGTGTTT+TGG | + | chr1_2:54615527-54615546 | Msa0077660:CDS | 40.0% |
AGATGATTAGTGGAATCCGT+AGG | + | chr1_2:54615553-54615572 | Msa0077660:CDS | 40.0% | |
ATGAACAAGATGCTGATGCA+AGG | + | chr1_2:54615580-54615599 | Msa0077660:CDS | 40.0% | |
TGCGGTATTTCTTCTGGATT+GGG | - | chr1_2:54615726-54615745 | None:intergenic | 40.0% | |
TTGCGGTATTTCTTCTGGAT+TGG | - | chr1_2:54615727-54615746 | None:intergenic | 40.0% | |
CATACTTGCGGTATTTCTTC+TGG | - | chr1_2:54615732-54615751 | None:intergenic | 40.0% | |
AAGAAATACCGCAAGTATGC+AGG | + | chr1_2:54615733-54615752 | Msa0077660:CDS | 40.0% | |
GAGCTATTCTCAGAAGCTTT+AGG | + | chr1_2:54615977-54615996 | Msa0077660:CDS | 40.0% | |
!! | CTCTAAGGTAAGAAGGATCA+AGG | - | chr1_2:54616003-54616022 | None:intergenic | 40.0% |
!! | GCCAAATCTCTAAGGTAAGA+AGG | - | chr1_2:54616010-54616029 | None:intergenic | 40.0% |
! | CCATAGTTAATTCGGGTTCA+GGG | - | chr1_2:54616078-54616097 | None:intergenic | 40.0% |
CCTGAACCCGAATTAACTAT+GGG | + | chr1_2:54616076-54616095 | Msa0077660:CDS | 40.0% | |
! | AAACATTGGTGATCTTCTGC+AGG | + | chr1_2:54616222-54616241 | Msa0077660:CDS | 40.0% |
GTTCACAAGTGTTTATCACC+GGG | + | chr1_2:54616355-54616374 | Msa0077660:CDS | 40.0% | |
!! | CGGGTTTTATCGAAGCATAT+AGG | + | chr1_2:54616374-54616393 | Msa0077660:CDS | 40.0% |
CTTCTTTGCAAACTCAGTAG+AGG | + | chr1_2:54616418-54616437 | Msa0077660:CDS | 40.0% | |
GTAGTATCCCTATAGATTGG+TGG | - | chr1_2:54616494-54616513 | None:intergenic | 40.0% | |
TGGAGCAGTATCAATTGTTG+TGG | + | chr1_2:54616604-54616623 | Msa0077660:intron | 40.0% | |
! | TTCTTTGGTGCACTTCTCTT+TGG | + | chr1_2:54616803-54616822 | Msa0077660:intron | 40.0% |
!! | CTAACAGGGTTTGTTAAAGG+AGG | - | chr1_2:54616881-54616900 | None:intergenic | 40.0% |
!! | GTGCTAACAGGGTTTGTTAA+AGG | - | chr1_2:54616884-54616903 | None:intergenic | 40.0% |
!!! | GGTGCTTTTGTGAAAGCATT+AGG | + | chr1_2:54617094-54617113 | Msa0077660:CDS | 40.0% |
GTTAAACCTGTAGCACCATT+TGG | + | chr1_2:54617127-54617146 | Msa0077660:intron | 40.0% | |
!!! | AGCATCTCAAGTTGGTTTTG+TGG | + | chr1_2:54617337-54617356 | Msa0077660:CDS | 40.0% |
!!! | TCTCAAGTTGGTTTTGTGGT+TGG | + | chr1_2:54617341-54617360 | Msa0077660:CDS | 40.0% |
CTTTCTCATCATGGAGTTAG+AGG | + | chr1_2:54615206-54615225 | Msa0077660:exon | 40.0% | |
ATGGAGTTAGAGGCAAGTAA+AGG | + | chr1_2:54615216-54615235 | Msa0077660:CDS | 40.0% | |
! | GCCTTTGAAGAATCAAAAGC+CGG | + | chr1_2:54615276-54615295 | Msa0077660:CDS | 40.0% |
TATGATAGGGACACTGAACT+TGG | - | chr1_2:54615406-54615425 | None:intergenic | 40.0% | |
GAAGATTCGAAGTGCATGTA+AGG | + | chr1_2:54615476-54615495 | Msa0077660:CDS | 40.0% | |
! | TGGTATTCCGGTTAGTGTTT+TGG | + | chr1_2:54615527-54615546 | Msa0077660:CDS | 40.0% |
AGATGATTAGTGGAATCCGT+AGG | + | chr1_2:54615553-54615572 | Msa0077660:CDS | 40.0% | |
ATGAACAAGATGCTGATGCA+AGG | + | chr1_2:54615580-54615599 | Msa0077660:CDS | 40.0% | |
TGCGGTATTTCTTCTGGATT+GGG | - | chr1_2:54615726-54615745 | None:intergenic | 40.0% | |
TTGCGGTATTTCTTCTGGAT+TGG | - | chr1_2:54615727-54615746 | None:intergenic | 40.0% | |
CATACTTGCGGTATTTCTTC+TGG | - | chr1_2:54615732-54615751 | None:intergenic | 40.0% | |
AAGAAATACCGCAAGTATGC+AGG | + | chr1_2:54615733-54615752 | Msa0077660:CDS | 40.0% | |
GAGCTATTCTCAGAAGCTTT+AGG | + | chr1_2:54615977-54615996 | Msa0077660:CDS | 40.0% | |
!! | CTCTAAGGTAAGAAGGATCA+AGG | - | chr1_2:54616003-54616022 | None:intergenic | 40.0% |
!! | GCCAAATCTCTAAGGTAAGA+AGG | - | chr1_2:54616010-54616029 | None:intergenic | 40.0% |
! | CCATAGTTAATTCGGGTTCA+GGG | - | chr1_2:54616078-54616097 | None:intergenic | 40.0% |
CCTGAACCCGAATTAACTAT+GGG | + | chr1_2:54616076-54616095 | Msa0077660:CDS | 40.0% | |
! | AAACATTGGTGATCTTCTGC+AGG | + | chr1_2:54616222-54616241 | Msa0077660:CDS | 40.0% |
GTTCACAAGTGTTTATCACC+GGG | + | chr1_2:54616355-54616374 | Msa0077660:CDS | 40.0% | |
!! | CGGGTTTTATCGAAGCATAT+AGG | + | chr1_2:54616374-54616393 | Msa0077660:CDS | 40.0% |
CTTCTTTGCAAACTCAGTAG+AGG | + | chr1_2:54616418-54616437 | Msa0077660:CDS | 40.0% | |
GTAGTATCCCTATAGATTGG+TGG | - | chr1_2:54616494-54616513 | None:intergenic | 40.0% | |
TGGAGCAGTATCAATTGTTG+TGG | + | chr1_2:54616604-54616623 | Msa0077660:intron | 40.0% | |
! | TTCTTTGGTGCACTTCTCTT+TGG | + | chr1_2:54616803-54616822 | Msa0077660:intron | 40.0% |
!! | CTAACAGGGTTTGTTAAAGG+AGG | - | chr1_2:54616881-54616900 | None:intergenic | 40.0% |
!! | GTGCTAACAGGGTTTGTTAA+AGG | - | chr1_2:54616884-54616903 | None:intergenic | 40.0% |
!!! | GGTGCTTTTGTGAAAGCATT+AGG | + | chr1_2:54617094-54617113 | Msa0077660:CDS | 40.0% |
GTTAAACCTGTAGCACCATT+TGG | + | chr1_2:54617127-54617146 | Msa0077660:intron | 40.0% | |
!!! | AGCATCTCAAGTTGGTTTTG+TGG | + | chr1_2:54617337-54617356 | Msa0077660:CDS | 40.0% |
!!! | TCTCAAGTTGGTTTTGTGGT+TGG | + | chr1_2:54617341-54617360 | Msa0077660:CDS | 40.0% |
!! | GCCGGCTTTTGATTCTTCAA+AGG | - | chr1_2:54615280-54615299 | None:intergenic | 45.0% |
GTGAAAGGCCTCTTAGAATC+TGG | + | chr1_2:54615300-54615319 | Msa0077660:CDS | 45.0% | |
TGGGAGAATGAAACATGCGT+GGG | - | chr1_2:54615344-54615363 | None:intergenic | 45.0% | |
TTGGGAGAATGAAACATGCG+TGG | - | chr1_2:54615345-54615364 | None:intergenic | 45.0% | |
TTCGAAGTGCATGTAAGGAG+TGG | + | chr1_2:54615481-54615500 | Msa0077660:CDS | 45.0% | |
TCGAAGTGCATGTAAGGAGT+GGG | + | chr1_2:54615482-54615501 | Msa0077660:CDS | 45.0% | |
! | TTCTTCTGGATTGGGAGGAT+CGG | - | chr1_2:54615718-54615737 | None:intergenic | 45.0% |
! | GGTATTTCTTCTGGATTGGG+AGG | - | chr1_2:54615723-54615742 | None:intergenic | 45.0% |
CCCTGAACCCGAATTAACTA+TGG | + | chr1_2:54616075-54616094 | Msa0077660:CDS | 45.0% | |
! | CCCATAGTTAATTCGGGTTC+AGG | - | chr1_2:54616079-54616098 | None:intergenic | 45.0% |
CTTCTACAAGACCAGATTGG+TGG | + | chr1_2:54616136-54616155 | Msa0077660:CDS | 45.0% | |
GAACTTGAAGACCACCAATC+TGG | - | chr1_2:54616150-54616169 | None:intergenic | 45.0% | |
ACAACAAGAGATCCATGCAG+AGG | - | chr1_2:54616202-54616221 | None:intergenic | 45.0% | |
CTCAGTAGAGGTTTCATCCA+AGG | + | chr1_2:54616430-54616449 | Msa0077660:CDS | 45.0% | |
CTTTATTGGACCAAGGACCT+TGG | - | chr1_2:54616450-54616469 | None:intergenic | 45.0% | |
CAAGGTCCTTGGTCCAATAA+AGG | + | chr1_2:54616448-54616467 | Msa0077660:CDS | 45.0% | |
!! | TGTTGTGGTGTTGTTGGACT+TGG | + | chr1_2:54616619-54616638 | Msa0077660:intron | 45.0% |
!! | CATGTTCCAAATGGTGCTAC+AGG | - | chr1_2:54617136-54617155 | None:intergenic | 45.0% |
!! | GCTGCAAAAGCATCTCAAGT+TGG | + | chr1_2:54617329-54617348 | Msa0077660:CDS | 45.0% |
!!! | CAAGTTGGTTTTGTGGTTGG+TGG | + | chr1_2:54617344-54617363 | Msa0077660:CDS | 45.0% |
!! | GCCGGCTTTTGATTCTTCAA+AGG | - | chr1_2:54615280-54615299 | None:intergenic | 45.0% |
GTGAAAGGCCTCTTAGAATC+TGG | + | chr1_2:54615300-54615319 | Msa0077660:CDS | 45.0% | |
TGGGAGAATGAAACATGCGT+GGG | - | chr1_2:54615344-54615363 | None:intergenic | 45.0% | |
TTGGGAGAATGAAACATGCG+TGG | - | chr1_2:54615345-54615364 | None:intergenic | 45.0% | |
TTCGAAGTGCATGTAAGGAG+TGG | + | chr1_2:54615481-54615500 | Msa0077660:CDS | 45.0% | |
TCGAAGTGCATGTAAGGAGT+GGG | + | chr1_2:54615482-54615501 | Msa0077660:CDS | 45.0% | |
! | TTCTTCTGGATTGGGAGGAT+CGG | - | chr1_2:54615718-54615737 | None:intergenic | 45.0% |
! | GGTATTTCTTCTGGATTGGG+AGG | - | chr1_2:54615723-54615742 | None:intergenic | 45.0% |
CCCTGAACCCGAATTAACTA+TGG | + | chr1_2:54616075-54616094 | Msa0077660:CDS | 45.0% | |
! | CCCATAGTTAATTCGGGTTC+AGG | - | chr1_2:54616079-54616098 | None:intergenic | 45.0% |
CTTCTACAAGACCAGATTGG+TGG | + | chr1_2:54616136-54616155 | Msa0077660:CDS | 45.0% | |
GAACTTGAAGACCACCAATC+TGG | - | chr1_2:54616150-54616169 | None:intergenic | 45.0% | |
ACAACAAGAGATCCATGCAG+AGG | - | chr1_2:54616202-54616221 | None:intergenic | 45.0% | |
CTCAGTAGAGGTTTCATCCA+AGG | + | chr1_2:54616430-54616449 | Msa0077660:CDS | 45.0% | |
CTTTATTGGACCAAGGACCT+TGG | - | chr1_2:54616450-54616469 | None:intergenic | 45.0% | |
CAAGGTCCTTGGTCCAATAA+AGG | + | chr1_2:54616448-54616467 | Msa0077660:CDS | 45.0% | |
!! | TGTTGTGGTGTTGTTGGACT+TGG | + | chr1_2:54616619-54616638 | Msa0077660:intron | 45.0% |
!! | CATGTTCCAAATGGTGCTAC+AGG | - | chr1_2:54617136-54617155 | None:intergenic | 45.0% |
!! | GCTGCAAAAGCATCTCAAGT+TGG | + | chr1_2:54617329-54617348 | Msa0077660:CDS | 45.0% |
!!! | CAAGTTGGTTTTGTGGTTGG+TGG | + | chr1_2:54617344-54617363 | Msa0077660:CDS | 45.0% |
GAATCAAAAGCCGGCGTGAA+AGG | + | chr1_2:54615285-54615304 | Msa0077660:CDS | 50.0% | |
! | TTCTAAGAGGCCTTTCACGC+CGG | - | chr1_2:54615298-54615317 | None:intergenic | 50.0% |
CGAAGTGCATGTAAGGAGTG+GGG | + | chr1_2:54615483-54615502 | Msa0077660:CDS | 50.0% | |
TGAAAGTGAGTCCCTCCAGT+TGG | - | chr1_2:54615682-54615701 | None:intergenic | 50.0% | |
! | TCTTCTGGATTGGGAGGATC+GGG | - | chr1_2:54615717-54615736 | None:intergenic | 50.0% |
GTTGATGTTCCTCCTCTGCA+TGG | + | chr1_2:54616187-54616206 | Msa0077660:CDS | 50.0% | |
ACAAGAGATCCATGCAGAGG+AGG | - | chr1_2:54616199-54616218 | None:intergenic | 50.0% | |
GAGGTTTCATCCAAGGTCCT+TGG | + | chr1_2:54616437-54616456 | Msa0077660:CDS | 50.0% | |
GCAAGGAAGAGTTCCCATCA+AGG | - | chr1_2:54616553-54616572 | None:intergenic | 50.0% | |
ACTCTTCCTTGCACCCTTTC+AGG | + | chr1_2:54616561-54616580 | Msa0077660:CDS | 50.0% | |
! | TCACAACCTGAAAGGGTGCA+AGG | - | chr1_2:54616570-54616589 | None:intergenic | 50.0% |
GAATCAAAAGCCGGCGTGAA+AGG | + | chr1_2:54615285-54615304 | Msa0077660:CDS | 50.0% | |
! | TTCTAAGAGGCCTTTCACGC+CGG | - | chr1_2:54615298-54615317 | None:intergenic | 50.0% |
CGAAGTGCATGTAAGGAGTG+GGG | + | chr1_2:54615483-54615502 | Msa0077660:CDS | 50.0% | |
TGAAAGTGAGTCCCTCCAGT+TGG | - | chr1_2:54615682-54615701 | None:intergenic | 50.0% | |
! | TCTTCTGGATTGGGAGGATC+GGG | - | chr1_2:54615717-54615736 | None:intergenic | 50.0% |
GTTGATGTTCCTCCTCTGCA+TGG | + | chr1_2:54616187-54616206 | Msa0077660:CDS | 50.0% | |
ACAAGAGATCCATGCAGAGG+AGG | - | chr1_2:54616199-54616218 | None:intergenic | 50.0% | |
GAGGTTTCATCCAAGGTCCT+TGG | + | chr1_2:54616437-54616456 | Msa0077660:CDS | 50.0% | |
GCAAGGAAGAGTTCCCATCA+AGG | - | chr1_2:54616553-54616572 | None:intergenic | 50.0% | |
ACTCTTCCTTGCACCCTTTC+AGG | + | chr1_2:54616561-54616580 | Msa0077660:CDS | 50.0% | |
! | TCACAACCTGAAAGGGTGCA+AGG | - | chr1_2:54616570-54616589 | None:intergenic | 50.0% |
TGGCAGCAGGGTCCGTAAAA+AGG | - | chr1_2:54615662-54615681 | None:intergenic | 55.0% | |
! | CTTCTGGATTGGGAGGATCG+GGG | - | chr1_2:54615716-54615735 | None:intergenic | 55.0% |
! | AATTCGGGTTCAGGGCATGC+AGG | - | chr1_2:54616070-54616089 | None:intergenic | 55.0% |
TGGCAGCAGGGTCCGTAAAA+AGG | - | chr1_2:54615662-54615681 | None:intergenic | 55.0% | |
! | CTTCTGGATTGGGAGGATCG+GGG | - | chr1_2:54615716-54615735 | None:intergenic | 55.0% |
! | AATTCGGGTTCAGGGCATGC+AGG | - | chr1_2:54616070-54616089 | None:intergenic | 55.0% |
TTACGGACCCTGCTGCCAAC+TGG | + | chr1_2:54615664-54615683 | Msa0077660:CDS | 60.0% | |
AGTCCCTCCAGTTGGCAGCA+GGG | - | chr1_2:54615674-54615693 | None:intergenic | 60.0% | |
TTACGGACCCTGCTGCCAAC+TGG | + | chr1_2:54615664-54615683 | Msa0077660:CDS | 60.0% | |
AGTCCCTCCAGTTGGCAGCA+GGG | - | chr1_2:54615674-54615693 | None:intergenic | 60.0% | |
GGACCCTGCTGCCAACTGGA+GGG | + | chr1_2:54615668-54615687 | Msa0077660:CDS | 65.0% | |
GAGTCCCTCCAGTTGGCAGC+AGG | - | chr1_2:54615675-54615694 | None:intergenic | 65.0% | |
GGACCCTGCTGCCAACTGGA+GGG | + | chr1_2:54615668-54615687 | Msa0077660:CDS | 65.0% | |
GAGTCCCTCCAGTTGGCAGC+AGG | - | chr1_2:54615675-54615694 | None:intergenic | 65.0% | |
CGGACCCTGCTGCCAACTGG+AGG | + | chr1_2:54615667-54615686 | Msa0077660:CDS | 70.0% | |
CGGACCCTGCTGCCAACTGG+AGG | + | chr1_2:54615667-54615686 | Msa0077660:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 54615182 | 54617397 | 54615182 | ID=Msa0077660;Name=Msa0077660 |
chr1_2 | mRNA | 54615182 | 54617397 | 54615182 | ID=Msa0077660-mRNA-1;Parent=Msa0077660;Name=Msa0077660-mRNA-1;_AED=0.30;_eAED=0.30;_QI=34|0.5|0.4|1|1|1|5|0|481 |
chr1_2 | exon | 54615182 | 54615754 | 54615182 | ID=Msa0077660-mRNA-1:exon:16950;Parent=Msa0077660-mRNA-1 |
chr1_2 | exon | 54615922 | 54616243 | 54615922 | ID=Msa0077660-mRNA-1:exon:16951;Parent=Msa0077660-mRNA-1 |
chr1_2 | exon | 54616338 | 54616582 | 54616338 | ID=Msa0077660-mRNA-1:exon:16952;Parent=Msa0077660-mRNA-1 |
chr1_2 | exon | 54616964 | 54617135 | 54616964 | ID=Msa0077660-mRNA-1:exon:16953;Parent=Msa0077660-mRNA-1 |
chr1_2 | exon | 54617230 | 54617397 | 54617230 | ID=Msa0077660-mRNA-1:exon:16954;Parent=Msa0077660-mRNA-1 |
chr1_2 | five_prime_UTR | 54615182 | 54615215 | 54615182 | ID=Msa0077660-mRNA-1:five_prime_utr;Parent=Msa0077660-mRNA-1 |
chr1_2 | CDS | 54615216 | 54615754 | 54615216 | ID=Msa0077660-mRNA-1:cds;Parent=Msa0077660-mRNA-1 |
chr1_2 | CDS | 54615922 | 54616243 | 54615922 | ID=Msa0077660-mRNA-1:cds;Parent=Msa0077660-mRNA-1 |
chr1_2 | CDS | 54616338 | 54616582 | 54616338 | ID=Msa0077660-mRNA-1:cds;Parent=Msa0077660-mRNA-1 |
chr1_2 | CDS | 54616964 | 54617135 | 54616964 | ID=Msa0077660-mRNA-1:cds;Parent=Msa0077660-mRNA-1 |
chr1_2 | CDS | 54617230 | 54617397 | 54617230 | ID=Msa0077660-mRNA-1:cds;Parent=Msa0077660-mRNA-1 |
Gene Sequence |
Protein sequence |