Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080260 | A0A396JRD2 | 82.484 | 805 | 85 | 5 | 47 | 850 | 1 | 750 | 0.0 | 1283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0068680 | Msa0080260 | 0.801584 | 8.402529e-49 | -8.615850e-47 |
| Msa0080260 | Msa0173990 | 0.814282 | 1.668335e-51 | -8.615850e-47 |
| Msa0080260 | Msa0239800 | 0.804625 | 1.974577e-49 | -8.615850e-47 |
| Msa0080260 | Msa0317510 | 0.811133 | 8.153888e-51 | -8.615850e-47 |
| Msa0080260 | Msa0484780 | 0.826704 | 2.343526e-54 | -8.615850e-47 |
| Msa0080260 | Msa1082500 | 0.819950 | 8.874057e-53 | -8.615850e-47 |
| Msa0080260 | Msa1098400 | 0.812498 | 4.113342e-51 | -8.615850e-47 |
| Msa0080260 | Msa1098420 | 0.805745 | 1.151047e-49 | -8.615850e-47 |
| Msa0080260 | Msa1463670 | 0.823078 | 1.681011e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080260 | MtrunA17_Chr1g0192581 | 82.484 | 805 | 85 | 5 | 47 | 850 | 1 | 750 | 0.0 | 1283 |
| Msa0080260 | MtrunA17_Chr7g0271711 | 46.285 | 942 | 373 | 27 | 3 | 850 | 1 | 903 | 0.0 | 657 |
| Msa0080260 | MtrunA17_Chr2g0294831 | 28.498 | 972 | 521 | 36 | 1 | 852 | 1 | 918 | 1.79e-71 | 253 |
| Msa0080260 | MtrunA17_Chr7g0250831 | 40.196 | 102 | 52 | 3 | 752 | 850 | 835 | 930 | 4.28e-13 | 73.6 |
| Msa0080260 | MtrunA17_Chr6g0457761 | 29.545 | 176 | 106 | 8 | 683 | 850 | 708 | 873 | 1.62e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080260 | AT3G58650.1 | 28.650 | 904 | 489 | 33 | 2 | 850 | 3 | 805 | 5.33e-64 | 231 |
| Msa0080260 | AT5G26910.3 | 27.430 | 463 | 282 | 13 | 398 | 850 | 402 | 820 | 9.75e-33 | 136 |
| Msa0080260 | AT5G26910.3 | 35.628 | 247 | 134 | 5 | 2 | 224 | 3 | 248 | 1.70e-26 | 117 |
| Msa0080260 | AT5G26910.4 | 27.430 | 463 | 282 | 13 | 398 | 850 | 403 | 821 | 1.10e-32 | 136 |
| Msa0080260 | AT5G26910.4 | 35.887 | 248 | 133 | 6 | 2 | 224 | 3 | 249 | 1.82e-26 | 117 |
| Msa0080260 | AT5G26910.1 | 27.430 | 463 | 282 | 13 | 398 | 850 | 403 | 821 | 1.10e-32 | 136 |
| Msa0080260 | AT5G26910.1 | 35.887 | 248 | 133 | 6 | 2 | 224 | 3 | 249 | 1.82e-26 | 117 |
| Msa0080260 | AT5G26910.2 | 35.887 | 248 | 133 | 6 | 2 | 224 | 3 | 249 | 4.17e-26 | 115 |
| Msa0080260 | AT3G05750.3 | 35.606 | 132 | 78 | 2 | 696 | 827 | 543 | 667 | 1.73e-17 | 87.8 |
| Msa0080260 | AT3G05750.3 | 38.983 | 118 | 70 | 2 | 111 | 226 | 39 | 156 | 2.72e-14 | 77.4 |
| Msa0080260 | AT3G05750.2 | 35.606 | 132 | 78 | 2 | 696 | 827 | 543 | 667 | 1.73e-17 | 87.8 |
| Msa0080260 | AT3G05750.2 | 38.983 | 118 | 70 | 2 | 111 | 226 | 39 | 156 | 2.72e-14 | 77.4 |
| Msa0080260 | AT3G05750.4 | 35.606 | 132 | 78 | 2 | 696 | 827 | 638 | 762 | 1.83e-17 | 87.8 |
| Msa0080260 | AT3G05750.4 | 34.826 | 201 | 106 | 4 | 50 | 226 | 52 | 251 | 1.89e-17 | 87.8 |
| Msa0080260 | AT3G05750.1 | 34.826 | 201 | 106 | 4 | 50 | 226 | 60 | 259 | 1.86e-17 | 87.8 |
| Msa0080260 | AT3G05750.1 | 35.606 | 132 | 78 | 2 | 696 | 827 | 646 | 770 | 2.58e-17 | 87.4 |
Find 164 sgRNAs with CRISPR-Local
Find 519 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTGCTTAGTGATAAAT+TGG | 0.140845 | 1_2:-58539478 | Msa0080260:CDS |
| TCTAAATATGCTGCATTCTT+AGG | 0.165931 | 1_2:+58545151 | None:intergenic |
| ATGACAATATTTCCCGTTTC+AGG | 0.183378 | 1_2:-58542721 | Msa0080260:intron |
| GACATTGAAGCCTTTGAAAA+TGG | 0.201384 | 1_2:-58538168 | Msa0080260:CDS |
| TGACTTAAGAGCCATGTTTA+AGG | 0.207080 | 1_2:+58545336 | None:intergenic |
| TCTTGATCTGCAAGAGAAAT+TGG | 0.213960 | 1_2:-58545038 | Msa0080260:CDS |
| TGAAGTTGATTTACCTTTGC+TGG | 0.221523 | 1_2:+58540142 | None:intergenic |
| TCTTTCTTTGTTGATGATAA+TGG | 0.224980 | 1_2:-58546072 | Msa0080260:exon |
| TGAACCAAAGGCTCATAAAA+TGG | 0.230963 | 1_2:-58545290 | Msa0080260:CDS |
| ATCACTACTAATTGATAATA+AGG | 0.265224 | 1_2:+58545462 | None:intergenic |
| ACAGGTTTGTGTTGACTTAT+TGG | 0.265851 | 1_2:+58540109 | None:intergenic |
| AACAACAAACGGTGCTGTTC+TGG | 0.282140 | 1_2:+58544783 | None:intergenic |
| GTTGCAGAGGAAAAGATTAA+AGG | 0.295051 | 1_2:-58544750 | Msa0080260:intron |
| TGTTGAATTTGAATGGAAAT+AGG | 0.295796 | 1_2:-58544856 | Msa0080260:CDS |
| TTGTGATAAAAGTGTTTCTT+TGG | 0.305866 | 1_2:+58545993 | None:intergenic |
| TTCGGAAGAACTCTTTCTTT+TGG | 0.311731 | 1_2:+58539968 | None:intergenic |
| TACCTATTTGATAGATGAAT+TGG | 0.313922 | 1_2:-58538121 | Msa0080260:intron |
| AACCAATTCATCTTATATTC+AGG | 0.323610 | 1_2:+58538621 | None:intergenic |
| ATGAGTCTGGCTACTAGCCC+TGG | 0.328479 | 1_2:+58545415 | None:intergenic |
| AAAAGAATCAACATCAATTC+TGG | 0.330223 | 1_2:+58539722 | None:intergenic |
| CGAGAGATTCAGAAAATAAT+AGG | 0.330370 | 1_2:-58544949 | Msa0080260:CDS |
| AAATAATTACCAGGTAAGTT+AGG | 0.347260 | 1_2:+58545969 | None:intergenic |
| TGAATCTCTCGAACCTTTGA+AGG | 0.348909 | 1_2:+58544961 | None:intergenic |
| ATTCTAACATTGAATCTAAA+AGG | 0.356408 | 1_2:-58540034 | Msa0080260:CDS |
| CACCTGAATATAAGATGAAT+TGG | 0.375181 | 1_2:-58538623 | Msa0080260:CDS |
| TCTAAAAGAACTCACTTTGT+TGG | 0.379512 | 1_2:-58546108 | None:intergenic |
| TAAGAATGCAGCATATTTAG+AGG | 0.380059 | 1_2:-58545149 | Msa0080260:CDS |
| TTTATGAGCCTTTGGTTCAA+TGG | 0.380731 | 1_2:+58545294 | None:intergenic |
| GCCAACTCTCTTTGATCTGT+TGG | 0.381202 | 1_2:-58538478 | Msa0080260:CDS |
| CTTATCAGTTACTCTTGTGC+TGG | 0.385816 | 1_2:+58540010 | None:intergenic |
| ACTCAGCAATGTAGAATTGA+TGG | 0.386018 | 1_2:-58538541 | Msa0080260:CDS |
| AGGGATATGTTGAATTTGAA+TGG | 0.390361 | 1_2:-58544863 | Msa0080260:CDS |
| CAAAGTTTATCAACCTGAAA+CGG | 0.394603 | 1_2:+58542708 | None:intergenic |
| AACCAATTCATCTATCAAAT+AGG | 0.394619 | 1_2:+58538119 | None:intergenic |
| TGGCATGAATCAGCAACTTC+AGG | 0.397356 | 1_2:-58539409 | Msa0080260:intron |
| TGAGCACTCCATTGGGTAGA+TGG | 0.402874 | 1_2:-58538200 | Msa0080260:CDS |
| AAGCAGAGACGTGCACTTTG+TGG | 0.407281 | 1_2:+58542744 | None:intergenic |
| CAATAGCTAACACCGTTCTT+AGG | 0.413116 | 1_2:-58540169 | Msa0080260:CDS |
| TGTACTCCTCATATATAGTT+GGG | 0.415013 | 1_2:+58545099 | None:intergenic |
| TCTTTGATCTGTTGGAGAAT+CGG | 0.419385 | 1_2:-58538470 | Msa0080260:CDS |
| GGTCGAACTTTCTGAAGAAC+AGG | 0.421894 | 1_2:+58540091 | None:intergenic |
| TGAGTCTGGCTACTAGCCCT+GGG | 0.426455 | 1_2:+58545416 | None:intergenic |
| TCAAATTATGATACAATGCT+TGG | 0.428269 | 1_2:-58539429 | Msa0080260:CDS |
| AGTAGCCAGACTCATGGGTT+TGG | 0.431579 | 1_2:-58545407 | Msa0080260:CDS |
| TCCTACGAGGTTACATGTAA+TGG | 0.436748 | 1_2:-58539658 | Msa0080260:CDS |
| ATATAACTTGCTCCTCATCT+TGG | 0.439222 | 1_2:+58544997 | None:intergenic |
| AAAGTTTATCAACCTGAAAC+GGG | 0.442879 | 1_2:+58542709 | None:intergenic |
| TACAAAATCATCAAGGATGA+TGG | 0.444399 | 1_2:-58538586 | Msa0080260:CDS |
| TTGTTATGAGTAACTGAAAT+GGG | 0.447444 | 1_2:+58545211 | None:intergenic |
| GAACCAAAGGCTCATAAAAT+GGG | 0.450651 | 1_2:-58545289 | Msa0080260:CDS |
| TGAATCCAAACCCATGAGTC+TGG | 0.452723 | 1_2:+58545402 | None:intergenic |
| TGAAGCCTTTGAAAATGGCT+TGG | 0.457955 | 1_2:-58538163 | Msa0080260:CDS |
| TTTCATCAGCAAAAGTAACT+TGG | 0.461060 | 1_2:-58539106 | Msa0080260:CDS |
| ACTGATGCCACCATGCATCT+AGG | 0.461328 | 1_2:+58538324 | None:intergenic |
| ACAATTGTTTCAGATAAAGA+TGG | 0.464516 | 1_2:-58545536 | Msa0080260:intron |
| AAGAATACTCTAAGCTCAAA+AGG | 0.473263 | 1_2:-58538425 | Msa0080260:CDS |
| GAAGGGTGTGATAAGGCCCC+AGG | 0.473540 | 1_2:-58545433 | Msa0080260:CDS |
| TTGTACTCCTCATATATAGT+TGG | 0.476311 | 1_2:+58545098 | None:intergenic |
| GTTTGTTATCGTCCTAGCGC+TGG | 0.478195 | 1_2:+58540070 | None:intergenic |
| CAAGGACATGAGCACTCCAT+TGG | 0.478271 | 1_2:-58538208 | Msa0080260:CDS |
| GCTTCCTTAGCTTCTTTGAT+CGG | 0.480496 | 1_2:-58546028 | Msa0080260:CDS |
| TTTCAATGTTTCCCTTTGCA+TGG | 0.487929 | 1_2:+58545843 | None:intergenic |
| TTTGTTATGAGTAACTGAAA+TGG | 0.489794 | 1_2:+58545210 | None:intergenic |
| GAAATAGAACGGTGTTCTGT+TGG | 0.491216 | 1_2:-58539579 | Msa0080260:CDS |
| TATCACAATCCTAACTTACC+TGG | 0.492317 | 1_2:-58545978 | Msa0080260:intron |
| ATATACTTCTTCATCTTGCA+TGG | 0.495644 | 1_2:+58538671 | None:intergenic |
| ATTTCTGAGGCACATTGAGG+TGG | 0.497061 | 1_2:+58539597 | None:intergenic |
| CTTTACAAAATAACAACAAA+CGG | 0.498294 | 1_2:+58544772 | None:intergenic |
| AGATCTGCAAGACTAAAGAA+AGG | 0.500789 | 1_2:+58537763 | None:intergenic |
| AAGAGTAACTGATAAGCAAA+AGG | 0.502215 | 1_2:-58540003 | Msa0080260:CDS |
| TTACAGCTTCGATCTTCCAT+TGG | 0.504233 | 1_2:+58539198 | None:intergenic |
| CTGTTGGAGAATCGGAGAAC+TGG | 0.510605 | 1_2:-58538462 | Msa0080260:CDS |
| TGCCCAATTTATCACTAAGC+AGG | 0.510690 | 1_2:+58539475 | None:intergenic |
| AAGTCTACTTCAACCTTCAA+AGG | 0.512513 | 1_2:-58544974 | Msa0080260:CDS |
| AATAGGTCTTGCCTAGGTAA+AGG | 0.513285 | 1_2:-58544932 | Msa0080260:CDS |
| CTTTGAACCTCGGCATTGGA+TGG | 0.515084 | 1_2:+58544887 | None:intergenic |
| CCTACTTTGAACCTCGGCAT+TGG | 0.515663 | 1_2:+58544883 | None:intergenic |
| TGAAATCATGCCAATGTCAC+AGG | 0.515734 | 1_2:-58545825 | Msa0080260:intron |
| GCATGGTATGCAACACATCA+AGG | 0.515846 | 1_2:-58539524 | Msa0080260:CDS |
| CAGAAAGTTCGACCAGCGCT+AGG | 0.516699 | 1_2:-58540082 | Msa0080260:CDS |
| CATTCCGATCAAAGAAGCTA+AGG | 0.517044 | 1_2:+58546024 | None:intergenic |
| GATGTTTCAAACCATGCAAA+GGG | 0.520211 | 1_2:-58545854 | Msa0080260:CDS |
| CTGGTGTTTACCTGTGACAT+TGG | 0.521249 | 1_2:+58545815 | None:intergenic |
| TTGCAGATCAAGAGTTCTCA+AGG | 0.524434 | 1_2:+58545048 | None:intergenic |
| CTTTGTGGAAAATGAAGAAT+GGG | 0.524806 | 1_2:+58542759 | None:intergenic |
| AAGCATGGAAGAAGAGGTGA+TGG | 0.525379 | 1_2:-58538247 | Msa0080260:CDS |
| CATATAGCATGACAGAAAGC+AGG | 0.529033 | 1_2:-58539833 | Msa0080260:CDS |
| GGGCTAGTAGCCAGACTCAT+GGG | 0.531216 | 1_2:-58545412 | Msa0080260:CDS |
| AATGGAGAAAAGAAGTTACA+AGG | 0.533794 | 1_2:-58546054 | Msa0080260:CDS |
| GAAATGGGTTTAGCAGACCT+TGG | 0.538176 | 1_2:+58545226 | None:intergenic |
| GATGGAACTTGAATATGTAA+AGG | 0.538230 | 1_2:-58538568 | Msa0080260:CDS |
| CAAGTCCCCAACTATATATG+AGG | 0.542079 | 1_2:-58545105 | Msa0080260:CDS |
| ACTTTGTGGAAAATGAAGAA+TGG | 0.544304 | 1_2:+58542758 | None:intergenic |
| GATGTCGGAGTTTAGAAGCA+TGG | 0.546019 | 1_2:-58538262 | Msa0080260:CDS |
| AAGGACATGAGCACTCCATT+GGG | 0.547496 | 1_2:-58538207 | Msa0080260:CDS |
| CATCAGTGATGAGGAAAGGT+TGG | 0.550514 | 1_2:-58538308 | Msa0080260:CDS |
| GAAAATAATAGGTCTTGCCT+AGG | 0.551230 | 1_2:-58544938 | Msa0080260:CDS |
| TCTATTTCTGAGGCACATTG+AGG | 0.551487 | 1_2:+58539594 | None:intergenic |
| TTGTGATACCATTGAACCAA+AGG | 0.551569 | 1_2:-58545302 | Msa0080260:CDS |
| CAATGCCGAGGTTCAAAGTA+GGG | 0.554685 | 1_2:-58544882 | Msa0080260:CDS |
| CCAATGCCGAGGTTCAAAGT+AGG | 0.555210 | 1_2:-58544883 | Msa0080260:CDS |
| TATAAAATGTAATGTTACAA+TGG | 0.555302 | 1_2:-58539877 | Msa0080260:CDS |
| CATGGAAGAAGAGGTGATGG+TGG | 0.557606 | 1_2:-58538244 | Msa0080260:CDS |
| AGGGCTAGTAGCCAGACTCA+TGG | 0.557813 | 1_2:-58545413 | Msa0080260:CDS |
| ATGGAGAAAAGAAGTTACAA+GGG | 0.561403 | 1_2:-58546053 | Msa0080260:CDS |
| GTTTAGAAGCATGGAAGAAG+AGG | 0.561464 | 1_2:-58538253 | Msa0080260:CDS |
| TTACATTTACATCTCCATTG+AGG | 0.562743 | 1_2:-58539797 | Msa0080260:CDS |
| TTTGCTGGTTTGCCTAAGAA+CGG | 0.562748 | 1_2:+58540157 | None:intergenic |
| GATCTGCAAGACTAAAGAAA+GGG | 0.564185 | 1_2:+58537764 | None:intergenic |
| GTTAGCAGAAGACGTGTACA+AGG | 0.564995 | 1_2:-58538286 | Msa0080260:CDS |
| AGAGTTCTTCCGAAAAGAAG+AGG | 0.565687 | 1_2:-58539959 | Msa0080260:CDS |
| AGGAGTACAATGTCTTCAGT+TGG | 0.566100 | 1_2:-58545085 | Msa0080260:CDS |
| CTAAGCAAGTGATGGAAACA+AGG | 0.566796 | 1_2:-58539746 | Msa0080260:CDS |
| TCCAACAGATCAAAGAGAGT+TGG | 0.567522 | 1_2:+58538477 | None:intergenic |
| TGATGATGAAGGGTGTGATA+AGG | 0.567960 | 1_2:-58545440 | Msa0080260:CDS |
| ATTAGTAGTGATGATGATGA+AGG | 0.568918 | 1_2:-58545451 | Msa0080260:CDS |
| TTGTTGAAAGGTGCAAAGCA+TGG | 0.577795 | 1_2:-58538347 | Msa0080260:CDS |
| TCTTAGGCTTCATACTAACA+TGG | 0.580559 | 1_2:+58545167 | None:intergenic |
| TAGTGATAAATTGGGCAGCA+TGG | 0.582742 | 1_2:-58539469 | Msa0080260:CDS |
| AGAACACCGTTCTATTTCTG+AGG | 0.582791 | 1_2:+58539584 | None:intergenic |
| GTCGACTACTAAGCAAGTGA+TGG | 0.583625 | 1_2:-58539754 | Msa0080260:CDS |
| AACCTGCTTAGTGATAAATT+GGG | 0.585492 | 1_2:-58539477 | Msa0080260:CDS |
| TCACTTAGATTCCTTAAACA+TGG | 0.585838 | 1_2:-58545347 | Msa0080260:CDS |
| TCTGTAGATATCAGAACCAA+TGG | 0.586401 | 1_2:-58539214 | Msa0080260:intron |
| TCACTACTTGCAATATCACT+AGG | 0.586974 | 1_2:+58545496 | None:intergenic |
| ATTGATGGCAGAAGAGTTAG+CGG | 0.587086 | 1_2:-58538526 | Msa0080260:CDS |
| AATGCATGGAATTAAGATGC+AGG | 0.588770 | 1_2:-58538377 | Msa0080260:CDS |
| AGATGTTTCAAACCATGCAA+AGG | 0.589368 | 1_2:-58545855 | Msa0080260:CDS |
| TTTCTGAGGCACATTGAGGT+GGG | 0.592064 | 1_2:+58539598 | None:intergenic |
| AAAGCTCTACAAAATCATCA+AGG | 0.594973 | 1_2:-58538593 | Msa0080260:CDS |
| TAAGTGACAACATAATGAAG+TGG | 0.601855 | 1_2:+58545363 | None:intergenic |
| CATATCCCTACTTTGAACCT+CGG | 0.606736 | 1_2:+58544877 | None:intergenic |
| AAGTCAAGCCATCTACCCAA+TGG | 0.609117 | 1_2:+58538192 | None:intergenic |
| CGCAACACGGAACCAAGATG+AGG | 0.611483 | 1_2:-58545009 | Msa0080260:CDS |
| GGAAGACAGATTTAACAGCA+TGG | 0.621284 | 1_2:-58539541 | Msa0080260:CDS |
| GTGACAACATAATGAAGTGG+AGG | 0.623561 | 1_2:+58545366 | None:intergenic |
| GTTCTTAGGCAAACCAGCAA+AGG | 0.627546 | 1_2:-58540155 | Msa0080260:CDS |
| GTACTCCTCATATATAGTTG+GGG | 0.627728 | 1_2:+58545100 | None:intergenic |
| CATGGTATGCAACACATCAA+GGG | 0.628447 | 1_2:-58539523 | Msa0080260:CDS |
| CAAAGCATGGCCTAGATGCA+TGG | 0.630631 | 1_2:-58538334 | Msa0080260:CDS |
| TGACTGTGTAAGTGAATGCA+TGG | 0.630868 | 1_2:-58538391 | Msa0080260:CDS |
| GGTGGATGAGCTTGTTAGCA+AGG | 0.631696 | 1_2:-58538226 | Msa0080260:CDS |
| AGACGTGTACAAGGAGATGT+CGG | 0.633293 | 1_2:-58538277 | Msa0080260:CDS |
| CAGATAAAGATGGATGACAA+TGG | 0.635008 | 1_2:-58545526 | Msa0080260:CDS |
| GATAGTGAAGATAGCACATG+TGG | 0.644975 | 1_2:-58539084 | Msa0080260:intron |
| ATGGCAGAAGAGTTAGCGGT+GGG | 0.645429 | 1_2:-58538522 | Msa0080260:CDS |
| ATATAGCATGACAGAAAGCA+GGG | 0.649280 | 1_2:-58539832 | Msa0080260:CDS |
| TGCAGATCAAGAGTTCTCAA+GGG | 0.654144 | 1_2:+58545049 | None:intergenic |
| GAGTCTGGCTACTAGCCCTG+GGG | 0.654903 | 1_2:+58545417 | None:intergenic |
| AATGTGCCTCAGAAATAGAA+CGG | 0.658499 | 1_2:-58539590 | Msa0080260:CDS |
| AAGGGTGTGATAAGGCCCCA+GGG | 0.660078 | 1_2:-58545432 | Msa0080260:CDS |
| TCCATTACATGTAACCTCGT+AGG | 0.664556 | 1_2:+58539657 | None:intergenic |
| GATGGCAGAAGAGTTAGCGG+TGG | 0.675055 | 1_2:-58538523 | Msa0080260:CDS |
| GGCATCTGCTAAGAGCATTG+AGG | 0.678302 | 1_2:-58545128 | Msa0080260:CDS |
| GCATGGTGGCATCAGTGATG+AGG | 0.679121 | 1_2:-58538317 | Msa0080260:CDS |
| TTAGTAGTGATGATGATGAA+GGG | 0.685067 | 1_2:-58545450 | Msa0080260:CDS |
| GTGGCATCAGTGATGAGGAA+AGG | 0.685249 | 1_2:-58538312 | Msa0080260:CDS |
| GGAGAATCGGAGAACTGGTG+TGG | 0.691183 | 1_2:-58538457 | Msa0080260:CDS |
| TGTAACACCATCCAATGCCG+AGG | 0.692381 | 1_2:-58544894 | Msa0080260:CDS |
| AAATTGGAAACAGCGCAACA+CGG | 0.695462 | 1_2:-58545022 | Msa0080260:CDS |
| CGTGATCATAATGACGCACG+AGG | 0.698258 | 1_2:-58539936 | Msa0080260:CDS |
| AGCATGGCCTAGATGCATGG+TGG | 0.715972 | 1_2:-58538331 | Msa0080260:CDS |
| AATTATCATTATCTCCTACG+AGG | 0.717855 | 1_2:-58539671 | Msa0080260:CDS |
| AGGACGATAACAAACAAATG+CGG | 0.767520 | 1_2:-58540062 | Msa0080260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTAATAATAATAAGTAA+GGG | + | chr1_2:58538328-58538347 | None:intergenic | 10.0% |
| !! | AATTGTAATAATAATAAGTA+AGG | + | chr1_2:58538329-58538348 | None:intergenic | 10.0% |
| !!! | TTAAACTTTCTTAAAGTATT+TGG | + | chr1_2:58541299-58541318 | None:intergenic | 15.0% |
| !! | TTTACAAAATAACAACAAAT+TGG | + | chr1_2:58543413-58543432 | None:intergenic | 15.0% |
| !! | TATAAAATGTAATGTTACAA+TGG | - | chr1_2:58544002-58544021 | Msa0080260:intron | 15.0% |
| !! | AAGAAAAAAATGGTTAAACT+AGG | + | chr1_2:58538117-58538136 | None:intergenic | 20.0% |
| !!! | ATCACTACTAATTGATAATA+AGG | + | chr1_2:58538420-58538439 | None:intergenic | 20.0% |
| !! | CTTTACAAAATAACAACAAA+CGG | + | chr1_2:58539110-58539129 | None:intergenic | 20.0% |
| !!! | AATTCTGAAAAAGTTTCATA+TGG | + | chr1_2:58540178-58540197 | None:intergenic | 20.0% |
| !! | TGATAGAGAAAAATAATACA+TGG | + | chr1_2:58540866-58540885 | None:intergenic | 20.0% |
| !!! | ACTTTAAGAAAGTTTAAAGA+AGG | - | chr1_2:58541302-58541321 | Msa0080260:intron | 20.0% |
| !! | AAGAAGAAATAGATACATAA+TGG | + | chr1_2:58541474-58541493 | None:intergenic | 20.0% |
| !!! | TTAATTCATACTGATTTATG+CGG | + | chr1_2:58541785-58541804 | None:intergenic | 20.0% |
| !! | ATTCTAACATTGAATCTAAA+AGG | - | chr1_2:58543845-58543864 | Msa0080260:intron | 20.0% |
| !!! | TTACTCATTTTCATTTGTTA+TGG | - | chr1_2:58544520-58544539 | Msa0080260:intron | 20.0% |
| !! | TAAACATAGTATATTATCCT+TGG | - | chr1_2:58544566-58544585 | Msa0080260:intron | 20.0% |
| !!! | GAACAAGCATTAATATTTTA+TGG | + | chr1_2:58545147-58545166 | None:intergenic | 20.0% |
| !!! | TCATATATAACCCTTTTTTT+AGG | - | chr1_2:58545165-58545184 | Msa0080260:CDS | 20.0% |
| !!! | GCTAAAAAATGATATTTTTC+TGG | - | chr1_2:58545980-58545999 | Msa0080260:CDS | 20.0% |
| !!! | TCTTTCTTTGTTGATGATAA+TGG | - | chr1_2:58537807-58537826 | Msa0080260:intron | 25.0% |
| !!! | TTGTGATAAAAGTGTTTCTT+TGG | + | chr1_2:58537889-58537908 | None:intergenic | 25.0% |
| ! | AAATAATTACCAGGTAAGTT+AGG | + | chr1_2:58537913-58537932 | None:intergenic | 25.0% |
| ! | AAAGACTAGAAATAATTACC+AGG | + | chr1_2:58537922-58537941 | None:intergenic | 25.0% |
| ! | GAGCAAAAAATATTCAGAAT+AGG | + | chr1_2:58537994-58538013 | None:intergenic | 25.0% |
| ! | TTAAACTAGGAAACTAAGAA+AGG | + | chr1_2:58538104-58538123 | None:intergenic | 25.0% |
| ! | GTCTTAACAAAATGTCATTA+GGG | + | chr1_2:58538182-58538201 | None:intergenic | 25.0% |
| ! | TGTCTTAACAAAATGTCATT+AGG | + | chr1_2:58538183-58538202 | None:intergenic | 25.0% |
| !! | CTACATAAAACTTCCTTTTT+AGG | - | chr1_2:58538264-58538283 | Msa0080260:CDS | 25.0% |
| ! | ACAATTGTTTCAGATAAAGA+TGG | - | chr1_2:58538343-58538362 | Msa0080260:CDS | 25.0% |
| !!! | AAAATGAAACTTTTTCTCCA+AGG | - | chr1_2:58538636-58538655 | Msa0080260:CDS | 25.0% |
| ! | TTGTTATGAGTAACTGAAAT+GGG | + | chr1_2:58538671-58538690 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTAACTGAAA+TGG | + | chr1_2:58538672-58538691 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGAATGGAAAT+AGG | - | chr1_2:58539023-58539042 | Msa0080260:intron | 25.0% |
| ! | TCAAACCAGAAAAATTGTAA+TGG | - | chr1_2:58539073-58539092 | Msa0080260:intron | 25.0% |
| ! | ATATCATGTTCCTATAAGTT+AGG | - | chr1_2:58539244-58539263 | Msa0080260:intron | 25.0% |
| !!! | TTAGTTTTTCCATGAAAAAC+TGG | - | chr1_2:58539595-58539614 | Msa0080260:CDS | 25.0% |
| ! | TTCAAAAAAACAAGAAACAG+TGG | + | chr1_2:58539776-58539795 | None:intergenic | 25.0% |
| ! | TTGTCAAAAGAAATATGCAA+GGG | + | chr1_2:58540202-58540221 | None:intergenic | 25.0% |
| ! | TTTGTCAAAAGAAATATGCA+AGG | + | chr1_2:58540203-58540222 | None:intergenic | 25.0% |
| ! | GTTAAATCAGCATTTCTAAA+TGG | + | chr1_2:58540606-58540625 | None:intergenic | 25.0% |
| !!! | ATGCTGATTTAACATCTAAT+TGG | - | chr1_2:58540613-58540632 | Msa0080260:intron | 25.0% |
| !!! | AAAAATCATTGGTGTTAAGT+GGG | + | chr1_2:58540817-58540836 | None:intergenic | 25.0% |
| ! | AAAACTTGATCAAAAATGGA+TGG | + | chr1_2:58540913-58540932 | None:intergenic | 25.0% |
| ! | AAGCAAAACTTGATCAAAAA+TGG | + | chr1_2:58540917-58540936 | None:intergenic | 25.0% |
| ! | TTTGCTTCATTAAAATTAGC+AGG | - | chr1_2:58540930-58540949 | Msa0080260:intron | 25.0% |
| ! | ATCAGATTATAAATGTTGAG+AGG | + | chr1_2:58541064-58541083 | None:intergenic | 25.0% |
| ! | TTGATAAACTTTGTAAGCTT+TGG | - | chr1_2:58541181-58541200 | Msa0080260:intron | 25.0% |
| !! | GAACTTACCAAAAAAGTTTT+GGG | + | chr1_2:58541423-58541442 | None:intergenic | 25.0% |
| !! | AGAACTTACCAAAAAAGTTT+TGG | + | chr1_2:58541424-58541443 | None:intergenic | 25.0% |
| ! | AATGGAAAAGAATATACATC+TGG | + | chr1_2:58541581-58541600 | None:intergenic | 25.0% |
| !! | ATGATTTTACAAGATTTTGC+TGG | + | chr1_2:58541709-58541728 | None:intergenic | 25.0% |
| ! | CAATGAAGACAATATAGTAA+AGG | - | chr1_2:58541729-58541748 | Msa0080260:intron | 25.0% |
| ! | TCAAACAAAGAAATTAGTGA+GGG | + | chr1_2:58541918-58541937 | None:intergenic | 25.0% |
| ! | TTCAAACAAAGAAATTAGTG+AGG | + | chr1_2:58541919-58541938 | None:intergenic | 25.0% |
| !!! | AACAAATTTTGGTCAATTTC+TGG | - | chr1_2:58542166-58542185 | Msa0080260:intron | 25.0% |
| ! | AATTTGCAGAACTGAATTTA+AGG | + | chr1_2:58542479-58542498 | None:intergenic | 25.0% |
| ! | AACAAGATTGTAAGTTCAAA+GGG | + | chr1_2:58542613-58542632 | None:intergenic | 25.0% |
| ! | TGTAGAAAAAATCTTGGTTA+CGG | + | chr1_2:58542875-58542894 | None:intergenic | 25.0% |
| ! | CAGAATTGTAGAAAAAATCT+TGG | + | chr1_2:58542881-58542900 | None:intergenic | 25.0% |
| !!! | CAAGATTTTTTCTACAATTC+TGG | - | chr1_2:58542879-58542898 | Msa0080260:intron | 25.0% |
| ! | ATATCATGTTCCTATAAGTT+AGG | - | chr1_2:58539244-58539263 | Msa0080260:intron | 25.0% |
| ! | AAAAGAATCAACATCAATTC+TGG | + | chr1_2:58544160-58544179 | None:intergenic | 25.0% |
| !! | TTCTTTTCATCATGTTGATA+AGG | - | chr1_2:58544173-58544192 | Msa0080260:intron | 25.0% |
| !! | GGAGATAATGATAATTTTTC+AGG | + | chr1_2:58544204-58544223 | None:intergenic | 25.0% |
| !!! | TGTTGGTTTTGAATCTATTT+TGG | - | chr1_2:58544317-58544336 | Msa0080260:intron | 25.0% |
| ! | TCAAATTATGATACAATGCT+TGG | - | chr1_2:58544450-58544469 | Msa0080260:intron | 25.0% |
| ! | TGTAACAACAAAAATGAAAG+CGG | - | chr1_2:58544699-58544718 | Msa0080260:intron | 25.0% |
| ! | ACTTCAAAGTTAAGCAAAAT+TGG | + | chr1_2:58544974-58544993 | None:intergenic | 25.0% |
| !!! | TATATAACCCTTTTTTTAGG+AGG | - | chr1_2:58545168-58545187 | Msa0080260:CDS | 25.0% |
| ! | AACCAATTCATCTTATATTC+AGG | + | chr1_2:58545261-58545280 | None:intergenic | 25.0% |
| ! | TACCTATTTGATAGATGAAT+TGG | - | chr1_2:58545758-58545777 | Msa0080260:intron | 25.0% |
| ! | AACCAATTCATCTATCAAAT+AGG | + | chr1_2:58545763-58545782 | None:intergenic | 25.0% |
| ! | ACCAATCAACTATAGAATTT+AGG | - | chr1_2:58545887-58545906 | Msa0080260:intron | 25.0% |
| ! | TCCTAAATTCTATAGTTGAT+TGG | + | chr1_2:58545891-58545910 | None:intergenic | 25.0% |
| AATGGAGAAAAGAAGTTACA+AGG | - | chr1_2:58537825-58537844 | Msa0080260:intron | 30.0% | |
| ATGGAGAAAAGAAGTTACAA+GGG | - | chr1_2:58537826-58537845 | Msa0080260:intron | 30.0% | |
| AAAGGTTGAAAAAATCACAC+TGG | + | chr1_2:58538086-58538105 | None:intergenic | 30.0% | |
| ! | ACTTGTTAAGAAGCCTAAAA+AGG | + | chr1_2:58538280-58538299 | None:intergenic | 30.0% |
| ! | ATTAGTAGTGATGATGATGA+AGG | - | chr1_2:58538428-58538447 | Msa0080260:CDS | 30.0% |
| ! | TTAGTAGTGATGATGATGAA+GGG | - | chr1_2:58538429-58538448 | Msa0080260:CDS | 30.0% |
| TAAGTGACAACATAATGAAG+TGG | + | chr1_2:58538519-58538538 | None:intergenic | 30.0% | |
| TCACTTAGATTCCTTAAACA+TGG | - | chr1_2:58538532-58538551 | Msa0080260:CDS | 30.0% | |
| ! | ATACTAACATGGCTTTTGAT+AGG | + | chr1_2:58538704-58538723 | None:intergenic | 30.0% |
| TCTAAATATGCTGCATTCTT+AGG | + | chr1_2:58538731-58538750 | None:intergenic | 30.0% | |
| TAAGAATGCAGCATATTTAG+AGG | - | chr1_2:58538730-58538749 | Msa0080260:intron | 30.0% | |
| TGTACTCCTCATATATAGTT+GGG | + | chr1_2:58538783-58538802 | None:intergenic | 30.0% | |
| TTGTACTCCTCATATATAGT+TGG | + | chr1_2:58538784-58538803 | None:intergenic | 30.0% | |
| CGAGAGATTCAGAAAATAAT+AGG | - | chr1_2:58538930-58538949 | Msa0080260:intron | 30.0% | |
| AGGGATATGTTGAATTTGAA+TGG | - | chr1_2:58539016-58539035 | Msa0080260:intron | 30.0% | |
| !! | GTTATTTTGTAAAGTTGCAG+AGG | - | chr1_2:58539116-58539135 | Msa0080260:CDS | 30.0% |
| TATAGGAACATGATATCAGT+GGG | + | chr1_2:58539240-58539259 | None:intergenic | 30.0% | |
| TTATAGGAACATGATATCAG+TGG | + | chr1_2:58539241-58539260 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTAGTATTCCATCG+TGG | + | chr1_2:58539270-58539289 | None:intergenic | 30.0% |
| AAGAAACTGAACTAGAAACT+AGG | - | chr1_2:58539315-58539334 | Msa0080260:intron | 30.0% | |
| TTCCATGAAAAACTGGATTA+TGG | - | chr1_2:58539602-58539621 | Msa0080260:CDS | 30.0% | |
| TCCATGAAAAACTGGATTAT+GGG | - | chr1_2:58539603-58539622 | Msa0080260:CDS | 30.0% | |
| !!! | TATTGTTTTTGCTTTGGATC+GGG | + | chr1_2:58539814-58539833 | None:intergenic | 30.0% |
| !!! | GTATTGTTTTTGCTTTGGAT+CGG | + | chr1_2:58539815-58539834 | None:intergenic | 30.0% |
| !! | ATGATATGAAAAGTACCTCA+GGG | + | chr1_2:58539837-58539856 | None:intergenic | 30.0% |
| ! | GGTACTTTTCATATCATCAA+TGG | - | chr1_2:58539840-58539859 | Msa0080260:CDS | 30.0% |
| TTGTTGCTGTAAGATACATA+AGG | - | chr1_2:58540046-58540065 | Msa0080260:CDS | 30.0% | |
| ! | CATACTTTAGAGGTTTGATT+GGG | + | chr1_2:58540074-58540093 | None:intergenic | 30.0% |
| AGAAGATGAAACTGAAAAAG+TGG | + | chr1_2:58540103-58540122 | None:intergenic | 30.0% | |
| !! | AACTTCTCCTTTTGATTCAT+AGG | - | chr1_2:58540129-58540148 | Msa0080260:CDS | 30.0% |
| TCTGAAAAAGTTTCATATGG+AGG | + | chr1_2:58540175-58540194 | None:intergenic | 30.0% | |
| ! | TATTTGAGATGACAGATCTT+GGG | + | chr1_2:58540281-58540300 | None:intergenic | 30.0% |
| CTTGATTGATGAATTCAAGA+TGG | + | chr1_2:58540316-58540335 | None:intergenic | 30.0% | |
| CATCTTGAATTCATCAATCA+AGG | - | chr1_2:58540314-58540333 | Msa0080260:intron | 30.0% | |
| TCTTTACATTAAGCAATGTG+AGG | + | chr1_2:58540400-58540419 | None:intergenic | 30.0% | |
| !! | GAAAAATCATTGGTGTTAAG+TGG | + | chr1_2:58540818-58540837 | None:intergenic | 30.0% |
| AGAAGATTGGAAAAATGAGA+TGG | + | chr1_2:58541030-58541049 | None:intergenic | 30.0% | |
| CTTTGTGGAAAATGAAGAAT+GGG | + | chr1_2:58541123-58541142 | None:intergenic | 30.0% | |
| ACTTTGTGGAAAATGAAGAA+TGG | + | chr1_2:58541124-58541143 | None:intergenic | 30.0% | |
| AAAGTTTATCAACCTGAAAC+GGG | + | chr1_2:58541173-58541192 | None:intergenic | 30.0% | |
| CAAAGTTTATCAACCTGAAA+CGG | + | chr1_2:58541174-58541193 | None:intergenic | 30.0% | |
| ! | CATCAGTTTTTCTTCAAAAC+AGG | + | chr1_2:58541385-58541404 | None:intergenic | 30.0% |
| !!! | GTTTTTGAAGTTCAAGAAAC+TGG | + | chr1_2:58541648-58541667 | None:intergenic | 30.0% |
| AATCATTTCCAAAATCAGCT+TGG | + | chr1_2:58541829-58541848 | None:intergenic | 30.0% | |
| ATTGATAGAGAAAGGTTTCA+AGG | + | chr1_2:58542134-58542153 | None:intergenic | 30.0% | |
| ! | GACCAACACTTAACAAATTT+TGG | - | chr1_2:58542155-58542174 | Msa0080260:intron | 30.0% |
| !! | GACCAAAATTTGTTAAGTGT+TGG | + | chr1_2:58542160-58542179 | None:intergenic | 30.0% |
| ATTGCAATTGTAAGTTGTTC+GGG | + | chr1_2:58542223-58542242 | None:intergenic | 30.0% | |
| CATTGCAATTGTAAGTTGTT+CGG | + | chr1_2:58542224-58542243 | None:intergenic | 30.0% | |
| AATATAGCTGTAAAGGGAAA+AGG | + | chr1_2:58542250-58542269 | None:intergenic | 30.0% | |
| GGACAAAATATAGCTGTAAA+GGG | + | chr1_2:58542256-58542275 | None:intergenic | 30.0% | |
| TGGACAAAATATAGCTGTAA+AGG | + | chr1_2:58542257-58542276 | None:intergenic | 30.0% | |
| TAACCATATGACATATGACA+AGG | + | chr1_2:58542332-58542351 | None:intergenic | 30.0% | |
| GAACAAGATTGTAAGTTCAA+AGG | + | chr1_2:58542614-58542633 | None:intergenic | 30.0% | |
| !! | AAGAAGAATTTTAGTGCAAG+CGG | + | chr1_2:58542661-58542680 | None:intergenic | 30.0% |
| ATTGCTTTCTATTGCAAACA+AGG | + | chr1_2:58542935-58542954 | None:intergenic | 30.0% | |
| !! | ATTTGAGTTGCAGAAAATGA+AGG | + | chr1_2:58542989-58543008 | None:intergenic | 30.0% |
| ATTTGAAGGAAGAATATGCA+GGG | + | chr1_2:58543056-58543075 | None:intergenic | 30.0% | |
| TATTTGAAGGAAGAATATGC+AGG | + | chr1_2:58543057-58543076 | None:intergenic | 30.0% | |
| ATCACAAGGAGAAAAAAACA+AGG | + | chr1_2:58543173-58543192 | None:intergenic | 30.0% | |
| ATTGAAATGGATGATGAATC+AGG | + | chr1_2:58543357-58543376 | None:intergenic | 30.0% | |
| ATCATCCATTTCAATTTCAC+AGG | - | chr1_2:58543362-58543381 | Msa0080260:intron | 30.0% | |
| !! | GTTATTTTGTAAAGTTGCAG+AGG | - | chr1_2:58539116-58539135 | Msa0080260:CDS | 30.0% |
| TATAGGAACATGATATCAGT+GGG | + | chr1_2:58539240-58539259 | None:intergenic | 30.0% | |
| TTATAGGAACATGATATCAG+TGG | + | chr1_2:58539241-58539260 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTAGTATTCCATCG+TGG | + | chr1_2:58539270-58539289 | None:intergenic | 30.0% |
| AAGAAACTGAACTAGAAACT+AGG | - | chr1_2:58539315-58539334 | Msa0080260:intron | 30.0% | |
| AAGAGTAACTGATAAGCAAA+AGG | - | chr1_2:58543876-58543895 | Msa0080260:intron | 30.0% | |
| TTACATTTACATCTCCATTG+AGG | - | chr1_2:58544082-58544101 | Msa0080260:intron | 30.0% | |
| ! | TGAGATATGTTTTTCCTCAA+TGG | + | chr1_2:58544099-58544118 | None:intergenic | 30.0% |
| AATTATCATTATCTCCTACG+AGG | - | chr1_2:58544208-58544227 | Msa0080260:intron | 30.0% | |
| AACCTGCTTAGTGATAAATT+GGG | - | chr1_2:58544402-58544421 | Msa0080260:intron | 30.0% | |
| ATATCTACAGAAGAGAAGAA+TGG | + | chr1_2:58544656-58544675 | None:intergenic | 30.0% | |
| !!! | AAGTTACTTTTGCTGATGAA+AGG | + | chr1_2:58544774-58544793 | None:intergenic | 30.0% |
| TTTCATCAGCAAAAGTAACT+TGG | - | chr1_2:58544773-58544792 | Msa0080260:CDS | 30.0% | |
| GCAAAATTATTCTTATCAGC+TGG | - | chr1_2:58544948-58544967 | Msa0080260:CDS | 30.0% | |
| ATATACTTCTTCATCTTGCA+TGG | + | chr1_2:58545211-58545230 | None:intergenic | 30.0% | |
| CACCTGAATATAAGATGAAT+TGG | - | chr1_2:58545256-58545275 | Msa0080260:CDS | 30.0% | |
| AAAGCTCTACAAAATCATCA+AGG | - | chr1_2:58545286-58545305 | Msa0080260:CDS | 30.0% | |
| TACAAAATCATCAAGGATGA+TGG | - | chr1_2:58545293-58545312 | Msa0080260:CDS | 30.0% | |
| GATGGAACTTGAATATGTAA+AGG | - | chr1_2:58545311-58545330 | Msa0080260:CDS | 30.0% | |
| AAGAATACTCTAAGCTCAAA+AGG | - | chr1_2:58545454-58545473 | Msa0080260:CDS | 30.0% | |
| !! | AAATTCCAAGCCATTTTCAA+AGG | + | chr1_2:58545724-58545743 | None:intergenic | 30.0% |
| ! | ATGAATTGGTTTCTGATTTG+TGG | - | chr1_2:58545772-58545791 | Msa0080260:intron | 30.0% |
| ! | ATTTTCTTTCACAGTACCAA+GGG | + | chr1_2:58545808-58545827 | None:intergenic | 30.0% |
| ! | AATTTTCTTTCACAGTACCA+AGG | + | chr1_2:58545809-58545828 | None:intergenic | 30.0% |
| GAAAATTCACGCATTATTAG+AGG | - | chr1_2:58545822-58545841 | Msa0080260:intron | 30.0% | |
| TCACATTTCACATACATAGT+TGG | + | chr1_2:58545950-58545969 | None:intergenic | 30.0% | |
| TGTGAAATGTGAACTACAAT+TGG | - | chr1_2:58545958-58545977 | Msa0080260:intron | 30.0% | |
| !! | ATGATATTTTTCTGGTCAAC+TGG | - | chr1_2:58545988-58546007 | Msa0080260:CDS | 30.0% |
| !!! | TAGATTGTTTTTGACATGTG+AGG | + | chr1_2:58546047-58546066 | None:intergenic | 30.0% |
| TATCACAATCCTAACTTACC+TGG | - | chr1_2:58537901-58537920 | Msa0080260:intron | 35.0% | |
| AGATGTTTCAAACCATGCAA+AGG | - | chr1_2:58538024-58538043 | Msa0080260:intron | 35.0% | |
| GATGTTTCAAACCATGCAAA+GGG | - | chr1_2:58538025-58538044 | Msa0080260:intron | 35.0% | |
| TTTCAATGTTTCCCTTTGCA+TGG | + | chr1_2:58538039-58538058 | None:intergenic | 35.0% | |
| TCGTGCTAACAAATTCTGTA+AGG | + | chr1_2:58538305-58538324 | None:intergenic | 35.0% | |
| CAGATAAAGATGGATGACAA+TGG | - | chr1_2:58538353-58538372 | Msa0080260:CDS | 35.0% | |
| TCACTACTTGCAATATCACT+AGG | + | chr1_2:58538386-58538405 | None:intergenic | 35.0% | |
| TGACTTAAGAGCCATGTTTA+AGG | + | chr1_2:58538546-58538565 | None:intergenic | 35.0% | |
| TTGTGATACCATTGAACCAA+AGG | - | chr1_2:58538577-58538596 | Msa0080260:CDS | 35.0% | |
| ! | TTTATGAGCCTTTGGTTCAA+TGG | + | chr1_2:58538588-58538607 | None:intergenic | 35.0% |
| TGAACCAAAGGCTCATAAAA+TGG | - | chr1_2:58538589-58538608 | Msa0080260:CDS | 35.0% | |
| GAACCAAAGGCTCATAAAAT+GGG | - | chr1_2:58538590-58538609 | Msa0080260:CDS | 35.0% | |
| ! | TTTCCCATTTTATGAGCCTT+TGG | + | chr1_2:58538596-58538615 | None:intergenic | 35.0% |
| TCTTAGGCTTCATACTAACA+TGG | + | chr1_2:58538715-58538734 | None:intergenic | 35.0% | |
| GTACTCCTCATATATAGTTG+GGG | + | chr1_2:58538782-58538801 | None:intergenic | 35.0% | |
| TCTTGATCTGCAAGAGAAAT+TGG | - | chr1_2:58538841-58538860 | Msa0080260:intron | 35.0% | |
| !! | ATATAACTTGCTCCTCATCT+TGG | + | chr1_2:58538885-58538904 | None:intergenic | 35.0% |
| AAGTCTACTTCAACCTTCAA+AGG | - | chr1_2:58538905-58538924 | Msa0080260:intron | 35.0% | |
| GAAAATAATAGGTCTTGCCT+AGG | - | chr1_2:58538941-58538960 | Msa0080260:intron | 35.0% | |
| ! | AAGCAGATTTTCCTTTACCT+AGG | + | chr1_2:58538961-58538980 | None:intergenic | 35.0% |
| ! | TCTGGCCATTACAATTTTTC+TGG | + | chr1_2:58539081-58539100 | None:intergenic | 35.0% |
| GTTGCAGAGGAAAAGATTAA+AGG | - | chr1_2:58539129-58539148 | Msa0080260:CDS | 35.0% | |
| AAAACTGACTGCTGAAAAAC+AGG | - | chr1_2:58539287-58539306 | Msa0080260:intron | 35.0% | |
| TAAAATAAACTCTGCAGACG+TGG | - | chr1_2:58539367-58539386 | Msa0080260:intron | 35.0% | |
| AGACACCAAGTTTAATTCTC+AGG | - | chr1_2:58539440-58539459 | Msa0080260:CDS | 35.0% | |
| GAAGACCTGAGAATTAAACT+TGG | + | chr1_2:58539448-58539467 | None:intergenic | 35.0% | |
| !!! | CATCAAGCTGTTTTTTGTGA+GGG | + | chr1_2:58539566-58539585 | None:intergenic | 35.0% |
| !!! | ACATCAAGCTGTTTTTTGTG+AGG | + | chr1_2:58539567-58539586 | None:intergenic | 35.0% |
| ! | TCCCATAATCCAGTTTTTCA+TGG | + | chr1_2:58539607-58539626 | None:intergenic | 35.0% |
| TAAATCAAGCTCTATGGTTG+AGG | + | chr1_2:58539708-58539727 | None:intergenic | 35.0% | |
| !!! | TCAGGGTATTGTTTTTGCTT+TGG | + | chr1_2:58539820-58539839 | None:intergenic | 35.0% |
| AAAGCAAAAACAATACCCTG+AGG | - | chr1_2:58539819-58539838 | Msa0080260:CDS | 35.0% | |
| !! | GATGATATGAAAAGTACCTC+AGG | + | chr1_2:58539838-58539857 | None:intergenic | 35.0% |
| GCAAGGAATTTAAGCTGTTT+GGG | + | chr1_2:58539891-58539910 | None:intergenic | 35.0% | |
| AGCAAGGAATTTAAGCTGTT+TGG | + | chr1_2:58539892-58539911 | None:intergenic | 35.0% | |
| CATCAAGTTCAAGAAAAGCA+AGG | + | chr1_2:58539908-58539927 | None:intergenic | 35.0% | |
| ! | ATCAAAGGCACAATCAACTT+TGG | + | chr1_2:58539931-58539950 | None:intergenic | 35.0% |
| ATGCTGTGAGTATCTTATCT+CGG | + | chr1_2:58540011-58540030 | None:intergenic | 35.0% | |
| ! | GCATACTTTAGAGGTTTGAT+TGG | + | chr1_2:58540075-58540094 | None:intergenic | 35.0% |
| AAGCACTCCTATGAATCAAA+AGG | + | chr1_2:58540139-58540158 | None:intergenic | 35.0% | |
| !!! | GATGACTTTTTTTCTCGGAA+TGG | + | chr1_2:58540256-58540275 | None:intergenic | 35.0% |
| ! | GTATTTGAGATGACAGATCT+TGG | + | chr1_2:58540282-58540301 | None:intergenic | 35.0% |
| !!! | GTTGATGATCTTTTTGTCAC+TGG | + | chr1_2:58540351-58540370 | None:intergenic | 35.0% |
| GATAACCATCTGTTGAGTTT+GGG | + | chr1_2:58540450-58540469 | None:intergenic | 35.0% | |
| AGATAACCATCTGTTGAGTT+TGG | + | chr1_2:58540451-58540470 | None:intergenic | 35.0% | |
| TCCTTTCTTTACAAAGCCTT+CGG | - | chr1_2:58540548-58540567 | Msa0080260:intron | 35.0% | |
| !! | CTTGCTATTGCAGTACAAAT+GGG | + | chr1_2:58540651-58540670 | None:intergenic | 35.0% |
| TTGCAAGACTAGATACTATC+AGG | + | chr1_2:58540680-58540699 | None:intergenic | 35.0% | |
| !! | ATAGTATCTAGTCTTGCAAC+TGG | - | chr1_2:58540681-58540700 | Msa0080260:intron | 35.0% |
| ! | AAAGGCTATGCTCAGATTTT+TGG | + | chr1_2:58540732-58540751 | None:intergenic | 35.0% |
| CCTCAAGACAGAAAAATCAT+TGG | + | chr1_2:58540828-58540847 | None:intergenic | 35.0% | |
| ! | CCAATGATTTTTCTGTCTTG+AGG | - | chr1_2:58540825-58540844 | Msa0080260:intron | 35.0% |
| AAAATGGATGGTTGCAATGA+AGG | + | chr1_2:58540901-58540920 | None:intergenic | 35.0% | |
| ! | AGTAATCTAGTTCCTCTGAT+TGG | - | chr1_2:58540993-58541012 | Msa0080260:intron | 35.0% |
| AGATTGGAAAAATGAGATGG+TGG | + | chr1_2:58541027-58541046 | None:intergenic | 35.0% | |
| ATGACAATATTTCCCGTTTC+AGG | - | chr1_2:58541158-58541177 | Msa0080260:intron | 35.0% | |
| TATCCATACCAAGCTTCAAA+TGG | - | chr1_2:58541329-58541348 | Msa0080260:intron | 35.0% | |
| ! | TGATTTTTCACTGCTGTTGT+AGG | - | chr1_2:58541356-58541375 | Msa0080260:intron | 35.0% |
| !!! | AAAAAAGTTTTGGGCTGAAG+CGG | + | chr1_2:58541414-58541433 | None:intergenic | 35.0% |
| ! | TCACTAACTCCATTTTGTTG+TGG | - | chr1_2:58541494-58541513 | Msa0080260:intron | 35.0% |
| ! | AATTCATTTTGCGAAGAAGC+AGG | + | chr1_2:58541551-58541570 | None:intergenic | 35.0% |
| !! | CAAGTTCTAAGGTCTGATAA+TGG | + | chr1_2:58541599-58541618 | None:intergenic | 35.0% |
| ! | TTTGAAGTTCAAGAAACTGG+TGG | + | chr1_2:58541645-58541664 | None:intergenic | 35.0% |
| AAATTCAAGTCAGAAGTTGC+TGG | + | chr1_2:58541674-58541693 | None:intergenic | 35.0% | |
| !! | GGAAGAGTATCTTCTAACAT+AGG | - | chr1_2:58541887-58541906 | Msa0080260:intron | 35.0% |
| !! | AAGAAAGTGTCACAGAGATA+TGG | + | chr1_2:58541985-58542004 | None:intergenic | 35.0% |
| CTTCACACTTAATCCATTAG+AGG | + | chr1_2:58542032-58542051 | None:intergenic | 35.0% | |
| TGCCTGATAAAATATGCTTC+TGG | + | chr1_2:58542091-58542110 | None:intergenic | 35.0% | |
| GTTGGTCAATTGATAGAGAA+AGG | + | chr1_2:58542142-58542161 | None:intergenic | 35.0% | |
| CGAACAACTTACAATTGCAA+TGG | - | chr1_2:58542222-58542241 | Msa0080260:intron | 35.0% | |
| TCAAAAGTCAGAATTGGCAA+TGG | + | chr1_2:58542277-58542296 | None:intergenic | 35.0% | |
| ! | ATTGCCAATTCTGACTTTTG+AGG | - | chr1_2:58542276-58542295 | Msa0080260:intron | 35.0% |
| !! | AGGAGCTTTTCAAGGAATTA+AGG | + | chr1_2:58542312-58542331 | None:intergenic | 35.0% |
| ! | ATATGACAAGGAGCTTTTCA+AGG | + | chr1_2:58542320-58542339 | None:intergenic | 35.0% |
| GACAGTTGGTTAATTGATAG+TGG | + | chr1_2:58542361-58542380 | None:intergenic | 35.0% | |
| !! | TTTGTTGCTACTTGCTTTTC+AGG | + | chr1_2:58542397-58542416 | None:intergenic | 35.0% |
| TTACAGCTTCATGACCAATT+TGG | - | chr1_2:58542497-58542516 | Msa0080260:intron | 35.0% | |
| TGCCAACACTGTAACAAAAT+GGG | + | chr1_2:58542577-58542596 | None:intergenic | 35.0% | |
| ATGCCAACACTGTAACAAAA+TGG | + | chr1_2:58542578-58542597 | None:intergenic | 35.0% | |
| !!! | ATTTTGTTACAGTGTTGGCA+TGG | - | chr1_2:58542577-58542596 | Msa0080260:intron | 35.0% |
| ATCAAGACAGAGAGAAAATG+TGG | + | chr1_2:58542696-58542715 | None:intergenic | 35.0% | |
| GGATCTTTGTAAGATCACTT+TGG | + | chr1_2:58542806-58542825 | None:intergenic | 35.0% | |
| TTTGAAGGAAGAATATGCAG+GGG | + | chr1_2:58543055-58543074 | None:intergenic | 35.0% | |
| ! | AAATAGTCCCAGATTGCTTT+TGG | - | chr1_2:58543072-58543091 | Msa0080260:intron | 35.0% |
| CAAAACACCAAAAGCAATCT+GGG | + | chr1_2:58543082-58543101 | None:intergenic | 35.0% | |
| TCAAAACACCAAAAGCAATC+TGG | + | chr1_2:58543083-58543102 | None:intergenic | 35.0% | |
| !!! | AGATTGCTTTTGGTGTTTTG+AGG | - | chr1_2:58543082-58543101 | Msa0080260:intron | 35.0% |
| !!! | GATTGCTTTTGGTGTTTTGA+GGG | - | chr1_2:58543083-58543102 | Msa0080260:intron | 35.0% |
| ! | GCAAAATCATGTCTTTTTGC+TGG | + | chr1_2:58543141-58543160 | None:intergenic | 35.0% |
| GAAAAAAACAAGGAAGGCAA+AGG | + | chr1_2:58543163-58543182 | None:intergenic | 35.0% | |
| CAAGGAGAAAAAAACAAGGA+AGG | + | chr1_2:58543169-58543188 | None:intergenic | 35.0% | |
| ATAGTTGGATTATCTGGCAA+CGG | - | chr1_2:58543207-58543226 | Msa0080260:intron | 35.0% | |
| AACTTCATAATCCGCTTCTA+TGG | - | chr1_2:58543233-58543252 | Msa0080260:intron | 35.0% | |
| !! | TGACATTTGGGTTGTCAAAA+TGG | + | chr1_2:58543292-58543311 | None:intergenic | 35.0% |
| TGGGAACAACTATGACATTT+GGG | + | chr1_2:58543304-58543323 | None:intergenic | 35.0% | |
| ATGGGAACAACTATGACATT+TGG | + | chr1_2:58543305-58543324 | None:intergenic | 35.0% | |
| GTTGCAGAGGAAAAGATTAA+AGG | - | chr1_2:58539129-58539148 | Msa0080260:CDS | 35.0% | |
| AAAACTGACTGCTGAAAAAC+AGG | - | chr1_2:58539287-58539306 | Msa0080260:intron | 35.0% | |
| TAAAATAAACTCTGCAGACG+TGG | - | chr1_2:58539367-58539386 | Msa0080260:intron | 35.0% | |
| ! | TGAAGTTGATTTACCTTTGC+TGG | + | chr1_2:58543740-58543759 | None:intergenic | 35.0% |
| !! | ACAGGTTTGTGTTGACTTAT+TGG | + | chr1_2:58543773-58543792 | None:intergenic | 35.0% |
| AGGACGATAACAAACAAATG+CGG | - | chr1_2:58543817-58543836 | Msa0080260:intron | 35.0% | |
| ! | TTCGGAAGAACTCTTTCTTT+TGG | + | chr1_2:58543914-58543933 | None:intergenic | 35.0% |
| ATATAGCATGACAGAAAGCA+GGG | - | chr1_2:58544047-58544066 | Msa0080260:intron | 35.0% | |
| AATGTGCCTCAGAAATAGAA+CGG | - | chr1_2:58544289-58544308 | Msa0080260:intron | 35.0% | |
| GAACCTGCTTAGTGATAAAT+TGG | - | chr1_2:58544401-58544420 | Msa0080260:intron | 35.0% | |
| TATTATCCTTGGCAACTTTC+TGG | - | chr1_2:58544577-58544596 | Msa0080260:intron | 35.0% | |
| ATCAGTTAGTCAAAGAGATG+AGG | - | chr1_2:58544601-58544620 | Msa0080260:intron | 35.0% | |
| TCTGTAGATATCAGAACCAA+TGG | - | chr1_2:58544665-58544684 | Msa0080260:intron | 35.0% | |
| ! | CAGAAGTGTAAAGACAATCA+AGG | + | chr1_2:58544833-58544852 | None:intergenic | 35.0% |
| TCTCAAGGTTATTCAAAGCA+TGG | + | chr1_2:58544922-58544941 | None:intergenic | 35.0% | |
| ! | TAATTTTGCAGCATGTCTCA+AGG | + | chr1_2:58544937-58544956 | None:intergenic | 35.0% |
| ACTCAGCAATGTAGAATTGA+TGG | - | chr1_2:58545338-58545357 | Msa0080260:CDS | 35.0% | |
| TCTTTGATCTGTTGGAGAAT+CGG | - | chr1_2:58545409-58545428 | Msa0080260:CDS | 35.0% | |
| AATGCATGGAATTAAGATGC+AGG | - | chr1_2:58545502-58545521 | Msa0080260:CDS | 35.0% | |
| ! | GACATTGAAGCCTTTGAAAA+TGG | - | chr1_2:58545711-58545730 | Msa0080260:intron | 35.0% |
| ! | GAAATAAGCATGAAAGCACA+TGG | + | chr1_2:58546080-58546099 | None:intergenic | 35.0% |
| GCTTCCTTAGCTTCTTTGAT+CGG | - | chr1_2:58537851-58537870 | Msa0080260:intron | 40.0% | |
| CATTCCGATCAAAGAAGCTA+AGG | + | chr1_2:58537858-58537877 | None:intergenic | 40.0% | |
| TGAAATCATGCCAATGTCAC+AGG | - | chr1_2:58538054-58538073 | Msa0080260:intron | 40.0% | |
| ! | TGATGATGAAGGGTGTGATA+AGG | - | chr1_2:58538439-58538458 | Msa0080260:CDS | 40.0% |
| GTGACAACATAATGAAGTGG+AGG | + | chr1_2:58538516-58538535 | None:intergenic | 40.0% | |
| CAAGTCCCCAACTATATATG+AGG | - | chr1_2:58538774-58538793 | Msa0080260:intron | 40.0% | |
| ! | AGGAGTACAATGTCTTCAGT+TGG | - | chr1_2:58538794-58538813 | Msa0080260:intron | 40.0% |
| TGCAGATCAAGAGTTCTCAA+GGG | + | chr1_2:58538833-58538852 | None:intergenic | 40.0% | |
| TTGCAGATCAAGAGTTCTCA+AGG | + | chr1_2:58538834-58538853 | None:intergenic | 40.0% | |
| AAATTGGAAACAGCGCAACA+CGG | - | chr1_2:58538857-58538876 | Msa0080260:intron | 40.0% | |
| TGAATCTCTCGAACCTTTGA+AGG | + | chr1_2:58538921-58538940 | None:intergenic | 40.0% | |
| AATAGGTCTTGCCTAGGTAA+AGG | - | chr1_2:58538947-58538966 | Msa0080260:intron | 40.0% | |
| CATATCCCTACTTTGAACCT+CGG | + | chr1_2:58539005-58539024 | None:intergenic | 40.0% | |
| AAGGTAGTTGCTAGAACAAG+TGG | - | chr1_2:58539148-58539167 | Msa0080260:CDS | 40.0% | |
| ! | TGTCTGCAGTATCTAAAGCA+AGG | + | chr1_2:58539425-58539444 | None:intergenic | 40.0% |
| !! | TCAAACTTGCTAGCTGGTAA+AGG | - | chr1_2:58539466-58539485 | Msa0080260:CDS | 40.0% |
| CTGCTGTAAATCAAGCTCTA+TGG | + | chr1_2:58539714-58539733 | None:intergenic | 40.0% | |
| !!! | TTGGATCGGGAGTTTTTTCA+TGG | + | chr1_2:58539801-58539820 | None:intergenic | 40.0% |
| AGGGTGGTTAGATACATCAA+AGG | + | chr1_2:58539946-58539965 | None:intergenic | 40.0% | |
| TGCAAGCGAAATTCACTTGA+AGG | + | chr1_2:58539977-58539996 | None:intergenic | 40.0% | |
| TGAAACTGAAAAAGTGGACG+AGG | + | chr1_2:58540097-58540116 | None:intergenic | 40.0% | |
| !!! | GGGCTGATGACTTTTTTTCT+CGG | + | chr1_2:58540261-58540280 | None:intergenic | 40.0% |
| GTCCATAAAGAGCTTTCTTC+AGG | - | chr1_2:58540505-58540524 | Msa0080260:intron | 40.0% | |
| CTCCTGAAGAAAGCTCTTTA+TGG | + | chr1_2:58540510-58540529 | None:intergenic | 40.0% | |
| CCTTTCTTTACAAAGCCTTC+GGG | - | chr1_2:58540549-58540568 | Msa0080260:intron | 40.0% | |
| ATCTATGTTGAACAACCCGA+AGG | + | chr1_2:58540567-58540586 | None:intergenic | 40.0% | |
| CTATTGCAGTACAAATGGGT+TGG | + | chr1_2:58540647-58540666 | None:intergenic | 40.0% | |
| !! | GCTTGCTATTGCAGTACAAA+TGG | + | chr1_2:58540652-58540671 | None:intergenic | 40.0% |
| CGAACCAAGTTAAATGCTGA+TGG | + | chr1_2:58540789-58540808 | None:intergenic | 40.0% | |
| TGGAAAATGAAGAATGGGTC+TGG | + | chr1_2:58541118-58541137 | None:intergenic | 40.0% | |
| ! | AGCTTATCACGCTTAACTTG+AGG | - | chr1_2:58541251-58541270 | Msa0080260:intron | 40.0% |
| ! | ACACCATTTGAAGCTTGGTA+TGG | + | chr1_2:58541335-58541354 | None:intergenic | 40.0% |
| ! | ATCAGACACCATTTGAAGCT+TGG | + | chr1_2:58541340-58541359 | None:intergenic | 40.0% |
| !!! | GCTTCAGCCCAAAACTTTTT+TGG | - | chr1_2:58541413-58541432 | Msa0080260:intron | 40.0% |
| !! | TCCATTTTGTTGTGGAGTGT+AGG | - | chr1_2:58541502-58541521 | Msa0080260:intron | 40.0% |
| !! | CCATTTTGTTGTGGAGTGTA+GGG | - | chr1_2:58541503-58541522 | Msa0080260:intron | 40.0% |
| ! | GCTGCAACATTCAAGTTCTA+AGG | + | chr1_2:58541610-58541629 | None:intergenic | 40.0% |
| AAACTGGTGGAAAACGAAAG+TGG | + | chr1_2:58541632-58541651 | None:intergenic | 40.0% | |
| CAAAGAACATCGTCTCTCAA+CGG | + | chr1_2:58541758-58541777 | None:intergenic | 40.0% | |
| TTGAGAGACGATGTTCTTTG+TGG | - | chr1_2:58541758-58541777 | Msa0080260:intron | 40.0% | |
| GCTTTCCATATTGACATGCT+TGG | - | chr1_2:58541858-58541877 | Msa0080260:intron | 40.0% | |
| CATTGCCAAGCATGTCAATA+TGG | + | chr1_2:58541866-58541885 | None:intergenic | 40.0% | |
| TATTGACATGCTTGGCAATG+AGG | - | chr1_2:58541866-58541885 | Msa0080260:intron | 40.0% | |
| CTTGGTCATTATCACCATCA+AGG | + | chr1_2:58541953-58541972 | None:intergenic | 40.0% | |
| ! | GCAATTTGCTTCTCCTCTAA+TGG | - | chr1_2:58542016-58542035 | Msa0080260:intron | 40.0% |
| ATGTTCAAGGTCAAGATGAG+GGG | + | chr1_2:58542061-58542080 | None:intergenic | 40.0% | |
| GATGTTCAAGGTCAAGATGA+GGG | + | chr1_2:58542062-58542081 | None:intergenic | 40.0% | |
| AGATGTTCAAGGTCAAGATG+AGG | + | chr1_2:58542063-58542082 | None:intergenic | 40.0% | |
| TCTTGACCTTGAACATCTCT+TGG | - | chr1_2:58542065-58542084 | Msa0080260:intron | 40.0% | |
| !! | GGCCAGAAGCATATTTTATC+AGG | - | chr1_2:58542086-58542105 | Msa0080260:intron | 40.0% |
| GAGACCTCAAAAGTCAGAAT+TGG | + | chr1_2:58542283-58542302 | None:intergenic | 40.0% | |
| GCTCCTTGTCATATGTCATA+TGG | - | chr1_2:58542326-58542345 | Msa0080260:intron | 40.0% | |
| TGCAGCAAGTGTAACCAAAT+TGG | + | chr1_2:58542514-58542533 | None:intergenic | 40.0% | |
| ! | ATCCTCCTTTTAGATGTTGG+AGG | + | chr1_2:58542552-58542571 | None:intergenic | 40.0% |
| ! | GTCATCCTCCTTTTAGATGT+TGG | + | chr1_2:58542555-58542574 | None:intergenic | 40.0% |
| ! | GACCCATTTTGTTACAGTGT+TGG | - | chr1_2:58542572-58542591 | Msa0080260:intron | 40.0% |
| ATCCTTTGTGTTCTCCAAAG+AGG | - | chr1_2:58542822-58542841 | Msa0080260:intron | 40.0% | |
| GCAAACAAGGTTAGACTACT+CGG | + | chr1_2:58542922-58542941 | None:intergenic | 40.0% | |
| ! | AGCAATCTGGGACTATTTGA+AGG | + | chr1_2:58543070-58543089 | None:intergenic | 40.0% |
| TACTTCAACTGAGCCATAGT+TGG | - | chr1_2:58543192-58543211 | Msa0080260:intron | 40.0% | |
| TGAGCCATAGTTGGATTATC+TGG | - | chr1_2:58543201-58543220 | Msa0080260:intron | 40.0% | |
| GTTGCCAGATAATCCAACTA+TGG | + | chr1_2:58543208-58543227 | None:intergenic | 40.0% | |
| !! | CATTTGGGTTGTCAAAATGG+AGG | + | chr1_2:58543289-58543308 | None:intergenic | 40.0% |
| TAGTTGTTCCCATCAAAGAG+AGG | - | chr1_2:58543312-58543331 | Msa0080260:intron | 40.0% | |
| AGGGACCTGTGAAATTGAAA+TGG | + | chr1_2:58543370-58543389 | None:intergenic | 40.0% | |
| ! | ATCTAGAGCTCTCTTCTTGA+GGG | + | chr1_2:58543389-58543408 | None:intergenic | 40.0% |
| ! | TATCTAGAGCTCTCTTCTTG+AGG | + | chr1_2:58543390-58543409 | None:intergenic | 40.0% |
| AAGGTAGTTGCTAGAACAAG+TGG | - | chr1_2:58539148-58539167 | Msa0080260:CDS | 40.0% | |
| CAATAGCTAACACCGTTCTT+AGG | - | chr1_2:58543710-58543729 | Msa0080260:intron | 40.0% | |
| !! | TTTGCTGGTTTGCCTAAGAA+CGG | + | chr1_2:58543725-58543744 | None:intergenic | 40.0% |
| CTTATCAGTTACTCTTGTGC+TGG | + | chr1_2:58543872-58543891 | None:intergenic | 40.0% | |
| AGAGTTCTTCCGAAAAGAAG+AGG | - | chr1_2:58543920-58543939 | Msa0080260:intron | 40.0% | |
| ! | ATGATCACGCCTCTTCTTTT+CGG | + | chr1_2:58543932-58543951 | None:intergenic | 40.0% |
| CATATAGCATGACAGAAAGC+AGG | - | chr1_2:58544046-58544065 | Msa0080260:intron | 40.0% | |
| ! | CTAAGCAAGTGATGGAAACA+AGG | - | chr1_2:58544133-58544152 | Msa0080260:intron | 40.0% |
| TCCTACGAGGTTACATGTAA+TGG | - | chr1_2:58544221-58544240 | Msa0080260:intron | 40.0% | |
| TCCATTACATGTAACCTCGT+AGG | + | chr1_2:58544225-58544244 | None:intergenic | 40.0% | |
| !! | TCTATTTCTGAGGCACATTG+AGG | + | chr1_2:58544288-58544307 | None:intergenic | 40.0% |
| !! | AGAACACCGTTCTATTTCTG+AGG | + | chr1_2:58544298-58544317 | None:intergenic | 40.0% |
| GAAATAGAACGGTGTTCTGT+TGG | - | chr1_2:58544300-58544319 | Msa0080260:intron | 40.0% | |
| GGAAGACAGATTTAACAGCA+TGG | - | chr1_2:58544338-58544357 | Msa0080260:intron | 40.0% | |
| CATGGTATGCAACACATCAA+GGG | - | chr1_2:58544356-58544375 | Msa0080260:intron | 40.0% | |
| TGCCCAATTTATCACTAAGC+AGG | + | chr1_2:58544407-58544426 | None:intergenic | 40.0% | |
| TAGTGATAAATTGGGCAGCA+TGG | - | chr1_2:58544410-58544429 | Msa0080260:intron | 40.0% | |
| AGTTAGTCAAAGAGATGAGG+AGG | - | chr1_2:58544604-58544623 | Msa0080260:intron | 40.0% | |
| TTACAGCTTCGATCTTCCAT+TGG | + | chr1_2:58544684-58544703 | None:intergenic | 40.0% | |
| GATAGTGAAGATAGCACATG+TGG | - | chr1_2:58544795-58544814 | Msa0080260:CDS | 40.0% | |
| CGTCGTTATAAAACATGCAG+GGG | + | chr1_2:58545038-58545057 | None:intergenic | 40.0% | |
| GCGTCGTTATAAAACATGCA+GGG | + | chr1_2:58545039-58545058 | None:intergenic | 40.0% | |
| AGCGTCGTTATAAAACATGC+AGG | + | chr1_2:58545040-58545059 | None:intergenic | 40.0% | |
| GGATGTATGTATTTGTGCAG+AGG | + | chr1_2:58545126-58545145 | None:intergenic | 40.0% | |
| TCTGCTGCCTCCTAAAAAAA+GGG | + | chr1_2:58545178-58545197 | None:intergenic | 40.0% | |
| ! | ATTGATGGCAGAAGAGTTAG+CGG | - | chr1_2:58545353-58545372 | Msa0080260:CDS | 40.0% |
| TCCAACAGATCAAAGAGAGT+TGG | + | chr1_2:58545405-58545424 | None:intergenic | 40.0% | |
| TGACTGTGTAAGTGAATGCA+TGG | - | chr1_2:58545488-58545507 | Msa0080260:CDS | 40.0% | |
| ! | GCAGGCAAGTTTTTGTTGAA+AGG | - | chr1_2:58545520-58545539 | Msa0080260:CDS | 40.0% |
| ! | TTGTTGAAAGGTGCAAAGCA+TGG | - | chr1_2:58545532-58545551 | Msa0080260:intron | 40.0% |
| ! | GTTTAGAAGCATGGAAGAAG+AGG | - | chr1_2:58545626-58545645 | Msa0080260:intron | 40.0% |
| ! | TGAAGCCTTTGAAAATGGCT+TGG | - | chr1_2:58545716-58545735 | Msa0080260:intron | 40.0% |
| !! | TTGTGGCTTGTTTAATCCCT+TGG | - | chr1_2:58545789-58545808 | Msa0080260:intron | 40.0% |
| GAGGAACATCAATCTGATTG+AGG | - | chr1_2:58545841-58545860 | Msa0080260:CDS | 40.0% | |
| !!! | TTGTTTTTGACATGTGAGGC+TGG | + | chr1_2:58546043-58546062 | None:intergenic | 40.0% |
| CTGGTGTTTACCTGTGACAT+TGG | + | chr1_2:58538067-58538086 | None:intergenic | 45.0% | |
| TGAATCCAAACCCATGAGTC+TGG | + | chr1_2:58538480-58538499 | None:intergenic | 45.0% | |
| ! | GAAATGGGTTTAGCAGACCT+TGG | + | chr1_2:58538656-58538675 | None:intergenic | 45.0% |
| CAATGCCGAGGTTCAAAGTA+GGG | - | chr1_2:58538997-58539016 | Msa0080260:intron | 45.0% | |
| !! | AACAACAAACGGTGCTGTTC+TGG | + | chr1_2:58539099-58539118 | None:intergenic | 45.0% |
| TCCTATAAGTTAGGCCACGA+TGG | - | chr1_2:58539253-58539272 | Msa0080260:intron | 45.0% | |
| TCCATCGTGGCCTAACTTAT+AGG | + | chr1_2:58539257-58539276 | None:intergenic | 45.0% | |
| ACTGACTGCTGAAAAACAGG+AGG | - | chr1_2:58539290-58539309 | Msa0080260:intron | 45.0% | |
| ! | CTGCAGTATCTAAAGCAAGG+AGG | + | chr1_2:58539422-58539441 | None:intergenic | 45.0% |
| !! | AGGTCTTCAAACTTGCTAGC+TGG | - | chr1_2:58539460-58539479 | Msa0080260:CDS | 45.0% |
| !!! | CAAGCTGTTTTTTGTGAGGG+AGG | + | chr1_2:58539563-58539582 | None:intergenic | 45.0% |
| TCACTTGAAGGCTGCTAAGA+GGG | + | chr1_2:58539965-58539984 | None:intergenic | 45.0% | |
| TTCACTTGAAGGCTGCTAAG+AGG | + | chr1_2:58539966-58539985 | None:intergenic | 45.0% | |
| CAAAGCCCAAACTCAACAGA+TGG | - | chr1_2:58540442-58540461 | Msa0080260:intron | 45.0% | |
| GTTATCTACTCTGCTGTACC+AGG | - | chr1_2:58540464-58540483 | Msa0080260:intron | 45.0% | |
| ! | CCCGAAGGCTTTGTAAAGAA+AGG | + | chr1_2:58540552-58540571 | None:intergenic | 45.0% |
| GGAGCCATCAGCATTTAACT+TGG | - | chr1_2:58540782-58540801 | Msa0080260:intron | 45.0% | |
| ATGGATGGTTGCAATGAAGG+AGG | + | chr1_2:58540898-58540917 | None:intergenic | 45.0% | |
| GTGGATGACATTCCAATCAG+AGG | + | chr1_2:58541008-58541027 | None:intergenic | 45.0% | |
| GGCAGACTAGTGAAGAAGAT+TGG | + | chr1_2:58541043-58541062 | None:intergenic | 45.0% | |
| ! | GCAGTACAAGGCATCTTCAT+CGG | + | chr1_2:58541221-58541240 | None:intergenic | 45.0% |
| CTTGACAAGAAGGCAGTACA+AGG | + | chr1_2:58541233-58541252 | None:intergenic | 45.0% | |
| GCGTGATAAGCTTGACAAGA+AGG | + | chr1_2:58541243-58541262 | None:intergenic | 45.0% | |
| CCCTACACTCCACAACAAAA+TGG | + | chr1_2:58541506-58541525 | None:intergenic | 45.0% | |
| !! | GTTGCTCTCCAAGCTGATTT+TGG | - | chr1_2:58541818-58541837 | Msa0080260:intron | 45.0% |
| GAAGCAGCAGTAATCCTTGA+TGG | - | chr1_2:58541936-58541955 | Msa0080260:intron | 45.0% | |
| TCACAGAGATATGGCACAAG+AGG | + | chr1_2:58541976-58541995 | None:intergenic | 45.0% | |
| TTCTGGCCAAGAGATGTTCA+AGG | + | chr1_2:58542074-58542093 | None:intergenic | 45.0% | |
| GCAGTGATTCAAGTGACAGT+TGG | + | chr1_2:58542375-58542394 | None:intergenic | 45.0% | |
| ! | TCAAGTTGCTGATCAAGAGG+AGG | + | chr1_2:58542440-58542459 | None:intergenic | 45.0% |
| ! | TGCTCAAGTTGCTGATCAAG+AGG | + | chr1_2:58542443-58542462 | None:intergenic | 45.0% |
| !! | CACTTGCTGCATTTTGCATC+AGG | - | chr1_2:58542523-58542542 | Msa0080260:intron | 45.0% |
| !! | TTGTTACAGTGTTGGCATGG+AGG | - | chr1_2:58542580-58542599 | Msa0080260:intron | 45.0% |
| AGGCAAGAAGGAGTTGTTGA+AGG | + | chr1_2:58542736-58542755 | None:intergenic | 45.0% | |
| AACAACTCCTTCTTGCCTCA+TGG | - | chr1_2:58542738-58542757 | Msa0080260:CDS | 45.0% | |
| ! | AGCCTCTTTGGAGAACACAA+AGG | + | chr1_2:58542827-58542846 | None:intergenic | 45.0% |
| AGAGATGCCTCATACCTTTC+AGG | - | chr1_2:58542847-58542866 | Msa0080260:intron | 45.0% | |
| ! | GGCTCAGTTGAAGTATCACA+AGG | + | chr1_2:58543187-58543206 | None:intergenic | 45.0% |
| !! | CCTAGAAGCTTTGGACGTTT+GGG | + | chr1_2:58543262-58543281 | None:intergenic | 45.0% |
| !! | ACCTAGAAGCTTTGGACGTT+TGG | + | chr1_2:58543263-58543282 | None:intergenic | 45.0% |
| TTGTTCCCATCAAAGAGAGG+AGG | - | chr1_2:58543315-58543334 | Msa0080260:intron | 45.0% | |
| TGTTCCCATCAAAGAGAGGA+GGG | - | chr1_2:58543316-58543335 | Msa0080260:intron | 45.0% | |
| TCCTATAAGTTAGGCCACGA+TGG | - | chr1_2:58539253-58539272 | Msa0080260:intron | 45.0% | |
| TCCATCGTGGCCTAACTTAT+AGG | + | chr1_2:58539257-58539276 | None:intergenic | 45.0% | |
| ACTGACTGCTGAAAAACAGG+AGG | - | chr1_2:58539290-58539309 | Msa0080260:intron | 45.0% | |
| GTTCTTAGGCAAACCAGCAA+AGG | - | chr1_2:58543724-58543743 | Msa0080260:intron | 45.0% | |
| ! | GGTCGAACTTTCTGAAGAAC+AGG | + | chr1_2:58543791-58543810 | None:intergenic | 45.0% |
| GTCGACTACTAAGCAAGTGA+TGG | - | chr1_2:58544125-58544144 | Msa0080260:intron | 45.0% | |
| !! | TTTCTGAGGCACATTGAGGT+GGG | + | chr1_2:58544284-58544303 | None:intergenic | 45.0% |
| !! | ATTTCTGAGGCACATTGAGG+TGG | + | chr1_2:58544285-58544304 | None:intergenic | 45.0% |
| GCATGGTATGCAACACATCA+AGG | - | chr1_2:58544355-58544374 | Msa0080260:intron | 45.0% | |
| TGGCATGAATCAGCAACTTC+AGG | - | chr1_2:58544470-58544489 | Msa0080260:intron | 45.0% | |
| CTCTGCTGCCTCCTAAAAAA+AGG | + | chr1_2:58545179-58545198 | None:intergenic | 45.0% | |
| GCCAACTCTCTTTGATCTGT+TGG | - | chr1_2:58545401-58545420 | Msa0080260:CDS | 45.0% | |
| CATCAGTGATGAGGAAAGGT+TGG | - | chr1_2:58545571-58545590 | Msa0080260:intron | 45.0% | |
| GTTAGCAGAAGACGTGTACA+AGG | - | chr1_2:58545593-58545612 | Msa0080260:intron | 45.0% | |
| AGACGTGTACAAGGAGATGT+CGG | - | chr1_2:58545602-58545621 | Msa0080260:intron | 45.0% | |
| GATGTCGGAGTTTAGAAGCA+TGG | - | chr1_2:58545617-58545636 | Msa0080260:intron | 45.0% | |
| AAGCATGGAAGAAGAGGTGA+TGG | - | chr1_2:58545632-58545651 | Msa0080260:intron | 45.0% | |
| AAGGACATGAGCACTCCATT+GGG | - | chr1_2:58545672-58545691 | Msa0080260:intron | 45.0% | |
| AAGTCAAGCCATCTACCCAA+TGG | + | chr1_2:58545690-58545709 | None:intergenic | 45.0% | |
| !! | AAAAAATTAAAAGAAAAAAA+TGG | + | chr1_2:58538127-58538146 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAATTTTTTA+TGG | - | chr1_2:58538128-58538147 | Msa0080260:CDS | 5.0% |
| AGTAGCCAGACTCATGGGTT+TGG | - | chr1_2:58538472-58538491 | Msa0080260:CDS | 50.0% | |
| !! | GGCATCTGCTAAGAGCATTG+AGG | - | chr1_2:58538751-58538770 | Msa0080260:intron | 50.0% |
| TGTAACACCATCCAATGCCG+AGG | - | chr1_2:58538985-58539004 | Msa0080260:intron | 50.0% | |
| ! | CTTTGAACCTCGGCATTGGA+TGG | + | chr1_2:58538995-58539014 | None:intergenic | 50.0% |
| CCTACTTTGAACCTCGGCAT+TGG | + | chr1_2:58538999-58539018 | None:intergenic | 50.0% | |
| CCAATGCCGAGGTTCAAAGT+AGG | - | chr1_2:58538996-58539015 | Msa0080260:intron | 50.0% | |
| !! | TTTTGTGAGGGAGGTGCAGA+AGG | + | chr1_2:58539554-58539573 | None:intergenic | 50.0% |
| GGCTCAATCAACTGCTGAAG+CGG | + | chr1_2:58539755-58539774 | None:intergenic | 50.0% | |
| TGGGTTCTCTGACAGTGACT+GGG | + | chr1_2:58539872-58539891 | None:intergenic | 50.0% | |
| TTGGGTTCTCTGACAGTGAC+TGG | + | chr1_2:58539873-58539892 | None:intergenic | 50.0% | |
| CTCACAGCATTCAAGACGTC+TGG | - | chr1_2:58540021-58540040 | Msa0080260:CDS | 50.0% | |
| GTGGACGAGGCATACTTTAG+AGG | + | chr1_2:58540084-58540103 | None:intergenic | 50.0% | |
| TGGCTCCATCAACAAGCACA+AGG | + | chr1_2:58540769-58540788 | None:intergenic | 50.0% | |
| AAGCAGAGACGTGCACTTTG+TGG | + | chr1_2:58541138-58541157 | None:intergenic | 50.0% | |
| TTGTTGTGGAGTGTAGGGAG+CGG | - | chr1_2:58541508-58541527 | Msa0080260:intron | 50.0% | |
| GAGATATGGCACAAGAGGCT+TGG | + | chr1_2:58541971-58541990 | None:intergenic | 50.0% | |
| TGATCAAGAGGAGGAGGATG+AGG | + | chr1_2:58542431-58542450 | None:intergenic | 50.0% | |
| AGTTGCTGATCAAGAGGAGG+AGG | + | chr1_2:58542437-58542456 | None:intergenic | 50.0% | |
| GGTCGCCTCCAACATCTAAA+AGG | - | chr1_2:58542544-58542563 | Msa0080260:intron | 50.0% | |
| CGCCTCCAACATCTAAAAGG+AGG | - | chr1_2:58542547-58542566 | Msa0080260:intron | 50.0% | |
| ! | TGAGGCATCTCTAGCCTCTT+TGG | + | chr1_2:58542839-58542858 | None:intergenic | 50.0% |
| ! | TACGGTGCCTGAAAGGTATG+AGG | + | chr1_2:58542857-58542876 | None:intergenic | 50.0% |
| TCTTGGTTACGGTGCCTGAA+AGG | + | chr1_2:58542864-58542883 | None:intergenic | 50.0% | |
| AAGGTTAGACTACTCGGCAC+TGG | + | chr1_2:58542916-58542935 | None:intergenic | 50.0% | |
| GTTGGATTATCTGGCAACGG+AGG | - | chr1_2:58543210-58543229 | Msa0080260:intron | 50.0% | |
| CGTTTGGGAAGCCATAGAAG+CGG | + | chr1_2:58543247-58543266 | None:intergenic | 50.0% | |
| CCCAAACGTCCAAAGCTTCT+AGG | - | chr1_2:58543259-58543278 | Msa0080260:intron | 50.0% | |
| ! | GGAGGCATACCTAGAAGCTT+TGG | + | chr1_2:58543271-58543290 | None:intergenic | 50.0% |
| GTTCCCATCAAAGAGAGGAG+GGG | - | chr1_2:58543317-58543336 | Msa0080260:intron | 50.0% | |
| TTGCCCCTCCTCTCTTTGAT+GGG | + | chr1_2:58543323-58543342 | None:intergenic | 50.0% | |
| !! | GTTTGTTATCGTCCTAGCGC+TGG | + | chr1_2:58543812-58543831 | None:intergenic | 50.0% |
| CGTGATCATAATGACGCACG+AGG | - | chr1_2:58543943-58543962 | Msa0080260:intron | 50.0% | |
| CTGATGCCAGAAAGTTGCCA+AGG | + | chr1_2:58544586-58544605 | None:intergenic | 50.0% | |
| ATGGCAGAAGAGTTAGCGGT+GGG | - | chr1_2:58545357-58545376 | Msa0080260:CDS | 50.0% | |
| CTGTTGGAGAATCGGAGAAC+TGG | - | chr1_2:58545417-58545436 | Msa0080260:CDS | 50.0% | |
| CAAAGCATGGCCTAGATGCA+TGG | - | chr1_2:58545545-58545564 | Msa0080260:intron | 50.0% | |
| ACTGATGCCACCATGCATCT+AGG | + | chr1_2:58545558-58545577 | None:intergenic | 50.0% | |
| GTGGCATCAGTGATGAGGAA+AGG | - | chr1_2:58545567-58545586 | Msa0080260:intron | 50.0% | |
| ! | CATGGAAGAAGAGGTGATGG+TGG | - | chr1_2:58545635-58545654 | Msa0080260:intron | 50.0% |
| !! | GGTGGATGAGCTTGTTAGCA+AGG | - | chr1_2:58545653-58545672 | Msa0080260:intron | 50.0% |
| CAAGGACATGAGCACTCCAT+TGG | - | chr1_2:58545671-58545690 | Msa0080260:intron | 50.0% | |
| TGAGCACTCCATTGGGTAGA+TGG | - | chr1_2:58545679-58545698 | Msa0080260:intron | 50.0% | |
| ! | AAGGGTGTGATAAGGCCCCA+GGG | - | chr1_2:58538447-58538466 | Msa0080260:CDS | 55.0% |
| TGAGTCTGGCTACTAGCCCT+GGG | + | chr1_2:58538466-58538485 | None:intergenic | 55.0% | |
| ATGAGTCTGGCTACTAGCCC+TGG | + | chr1_2:58538467-58538486 | None:intergenic | 55.0% | |
| ! | AGGGCTAGTAGCCAGACTCA+TGG | - | chr1_2:58538466-58538485 | Msa0080260:CDS | 55.0% |
| ! | GGGCTAGTAGCCAGACTCAT+GGG | - | chr1_2:58538467-58538486 | Msa0080260:CDS | 55.0% |
| CGCAACACGGAACCAAGATG+AGG | - | chr1_2:58538870-58538889 | Msa0080260:intron | 55.0% | |
| TTCTCTGACAGTGACTGGGC+AGG | + | chr1_2:58539868-58539887 | None:intergenic | 55.0% | |
| CTTGAAGGCTGCTAAGAGGG+TGG | + | chr1_2:58539962-58539981 | None:intergenic | 55.0% | |
| ACTCTGCTGTACCAGGCTCT+TGG | - | chr1_2:58540471-58540490 | Msa0080260:intron | 55.0% | |
| TGAAGCAAGCTCCAAGAGCC+TGG | + | chr1_2:58540485-58540504 | None:intergenic | 55.0% | |
| AAGGCGAGGCTGGTGGTTAA+AGG | + | chr1_2:58540750-58540769 | None:intergenic | 55.0% | |
| CCATCAACAAGCACAAGGCG+AGG | + | chr1_2:58540764-58540783 | None:intergenic | 55.0% | |
| ! | CCTCGCCTTGTGCTTGTTGA+TGG | - | chr1_2:58540761-58540780 | Msa0080260:intron | 55.0% |
| GAGTGTAGGGAGCGGTAAGT+TGG | - | chr1_2:58541516-58541535 | Msa0080260:intron | 55.0% | |
| TCAAGAGGAGGAGGATGAGG+AGG | + | chr1_2:58542428-58542447 | None:intergenic | 55.0% | |
| GTTGCCCCTCCTCTCTTTGA+TGG | + | chr1_2:58543324-58543343 | None:intergenic | 55.0% | |
| CAGAAAGTTCGACCAGCGCT+AGG | - | chr1_2:58543797-58543816 | Msa0080260:intron | 55.0% | |
| GATGGCAGAAGAGTTAGCGG+TGG | - | chr1_2:58545356-58545375 | Msa0080260:CDS | 55.0% | |
| GGAGAATCGGAGAACTGGTG+TGG | - | chr1_2:58545422-58545441 | Msa0080260:CDS | 55.0% | |
| AGCATGGCCTAGATGCATGG+TGG | - | chr1_2:58545548-58545567 | Msa0080260:intron | 55.0% | |
| GCATGGTGGCATCAGTGATG+AGG | - | chr1_2:58545562-58545581 | Msa0080260:intron | 55.0% | |
| ACTCGCACTCGATGTGACTC+GGG | + | chr1_2:58545920-58545939 | None:intergenic | 55.0% | |
| CACTCGCACTCGATGTGACT+CGG | + | chr1_2:58545921-58545940 | None:intergenic | 55.0% | |
| TCACATCGAGTGCGAGTGGA+AGG | - | chr1_2:58545923-58545942 | Msa0080260:intron | 55.0% | |
| ! | GAAGGGTGTGATAAGGCCCC+AGG | - | chr1_2:58538446-58538465 | Msa0080260:CDS | 60.0% |
| GAGTCTGGCTACTAGCCCTG+GGG | + | chr1_2:58538465-58538484 | None:intergenic | 60.0% | |
| CAACAAGCACAAGGCGAGGC+TGG | + | chr1_2:58540760-58540779 | None:intergenic | 60.0% | |
| CGAAGGGCCATGAGGCAAGA+AGG | + | chr1_2:58542748-58542767 | None:intergenic | 60.0% | |
| CGAGTCACATCGAGTGCGAG+TGG | - | chr1_2:58545919-58545938 | Msa0080260:intron | 60.0% | |
| CAAGCACAAGGCGAGGCTGG+TGG | + | chr1_2:58540757-58540776 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 58537775 | 58546126 | 58537775 | ID=Msa0080260;Name=Msa0080260 |
| chr1_2 | mRNA | 58537775 | 58546126 | 58537775 | ID=Msa0080260-mRNA-1;Parent=Msa0080260;Name=Msa0080260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=45|0.28|0.25|0.75|1|1|8|0|853 |
| chr1_2 | exon | 58537775 | 58537786 | 58537775 | ID=Msa0080260-mRNA-1:exon:18760;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58538122 | 58538714 | 58538122 | ID=Msa0080260-mRNA-1:exon:18759;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58539085 | 58539229 | 58539085 | ID=Msa0080260-mRNA-1:exon:18758;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58539410 | 58540212 | 58539410 | ID=Msa0080260-mRNA-1:exon:18757;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58542722 | 58542782 | 58542722 | ID=Msa0080260-mRNA-1:exon:18756;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58544751 | 58545545 | 58544751 | ID=Msa0080260-mRNA-1:exon:18755;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58545826 | 58545875 | 58545826 | ID=Msa0080260-mRNA-1:exon:18754;Parent=Msa0080260-mRNA-1 |
| chr1_2 | exon | 58545979 | 58546126 | 58545979 | ID=Msa0080260-mRNA-1:exon:18753;Parent=Msa0080260-mRNA-1 |
| chr1_2 | five_prime_UTR | 58546082 | 58546126 | 58546082 | ID=Msa0080260-mRNA-1:five_prime_utr;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58545979 | 58546081 | 58545979 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58545826 | 58545875 | 58545826 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58544751 | 58545545 | 58544751 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58542722 | 58542782 | 58542722 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58539410 | 58540212 | 58539410 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58539085 | 58539229 | 58539085 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58538122 | 58538714 | 58538122 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| chr1_2 | CDS | 58537775 | 58537786 | 58537775 | ID=Msa0080260-mRNA-1:cds;Parent=Msa0080260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
