Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087390 | XP_022754926.1 | 89.474 | 133 | 14 | 0 | 12 | 144 | 86 | 218 | 1.94e-62 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087390 | sp|Q9SZE4|VP322_ARATH | 82.090 | 134 | 23 | 1 | 12 | 144 | 86 | 219 | 1.43e-56 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087390 | A0A6P5ZQV1 | 89.474 | 133 | 14 | 0 | 12 | 144 | 86 | 218 | 9.27e-63 | 201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020930 | Msa0087390 | 0.801008 | 1.102560e-48 | -8.615850e-47 |
| Msa0087390 | Msa0299730 | 0.813558 | 2.408339e-51 | -8.615850e-47 |
| Msa0087390 | Msa0418070 | 0.900100 | 1.026447e-77 | -8.615850e-47 |
| Msa0087390 | Msa0778490 | 0.888194 | 7.325054e-73 | -8.615850e-47 |
| Msa0087390 | Msa0895120 | 0.806031 | 1.002004e-49 | -8.615850e-47 |
| Msa0087390 | Msa0966090 | 0.819914 | 9.041036e-53 | -8.615850e-47 |
| Msa0087390 | Msa1432770 | 0.811529 | 6.688542e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087390 | MtrunA17_Chr6g0487521 | 93.233 | 133 | 9 | 0 | 12 | 144 | 88 | 220 | 4.92e-66 | 200 |
| Msa0087390 | MtrunA17_Chr8g0389481 | 81.203 | 133 | 23 | 2 | 12 | 144 | 92 | 222 | 4.28e-48 | 154 |
| Msa0087390 | MtrunA17_Chr8g0389471 | 75.940 | 133 | 31 | 1 | 12 | 144 | 90 | 221 | 5.25e-44 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087390 | AT4G29160.2 | 82.090 | 134 | 23 | 1 | 12 | 144 | 59 | 192 | 5.49e-58 | 179 |
| Msa0087390 | AT4G29160.1 | 82.090 | 134 | 23 | 1 | 12 | 144 | 86 | 219 | 1.45e-57 | 179 |
| Msa0087390 | AT4G29160.3 | 82.090 | 134 | 23 | 1 | 12 | 144 | 86 | 219 | 1.45e-57 | 179 |
| Msa0087390 | AT2G19830.1 | 79.104 | 134 | 20 | 3 | 12 | 144 | 68 | 194 | 6.49e-53 | 166 |
| Msa0087390 | AT2G19830.2 | 79.104 | 134 | 20 | 3 | 12 | 144 | 87 | 213 | 8.96e-53 | 166 |
Find 146 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGGTTTATTTCAGAAAT+TGG | 0.171483 | 1_2:-68347959 | Msa0087390:five_prime_UTR |
| GGTACCAGTTTCATTGATTT+TGG | 0.172670 | 1_2:-68346743 | Msa0087390:intron |
| ATCTCATGCATGTTGGTTTC+TGG | 0.193122 | 1_2:-68347929 | Msa0087390:five_prime_UTR |
| TCCTCAGGAGTCGGCTTTGC+AGG | 0.229972 | 1_2:+68341143 | None:intergenic |
| AGTTTGGTGAAACCCGTATT+TGG | 0.231398 | 1_2:-68346863 | Msa0087390:five_prime_UTR |
| ACACCATTGCATCCTCTATC+TGG | 0.232305 | 1_2:-68343828 | Msa0087390:five_prime_UTR |
| AGAAATCTGCTTCTTCCTTT+TGG | 0.251105 | 1_2:-68340798 | Msa0087390:three_prime_UTR |
| GAAAGTGATTATGGAGGATT+AGG | 0.272658 | 1_2:-68346962 | Msa0087390:five_prime_UTR |
| AAGTTGACAGAAAGTGATTA+TGG | 0.285655 | 1_2:-68346971 | Msa0087390:five_prime_UTR |
| TAACAAAACCAGCAAAATTC+TGG | 0.297982 | 1_2:+68340880 | None:intergenic |
| TTCTTCTAGGACAATGAAAT+TGG | 0.299980 | 1_2:-68343790 | Msa0087390:exon |
| TTGGTTTCTGGTGTTGATTT+TGG | 0.301252 | 1_2:-68347917 | Msa0087390:five_prime_UTR |
| AGAGCAGTGGTGCTGGGAAT+TGG | 0.301411 | 1_2:-68345206 | Msa0087390:five_prime_UTR |
| GCTGATAGCAGGCACCTTAA+TGG | 0.308786 | 1_2:+68345603 | None:intergenic |
| TAGAGGATGCAATGGTGTTT+TGG | 0.313250 | 1_2:+68343833 | None:intergenic |
| CCCACAGTGCATGTCTCAGC+TGG | 0.318746 | 1_2:-68341188 | Msa0087390:CDS |
| GAGCAGTGGTGCTGGGAATT+GGG | 0.318997 | 1_2:-68345205 | Msa0087390:five_prime_UTR |
| ACAACAATCTAAAATAATTC+TGG | 0.328240 | 1_2:+68340938 | None:intergenic |
| ATCAAAACAACTTATATTCA+TGG | 0.333826 | 1_2:+68346658 | None:intergenic |
| GACATCAATGTATCATTTAA+CGG | 0.342148 | 1_2:+68340983 | None:intergenic |
| GGAAGCAGAACTTGAAGAAT+TGG | 0.342673 | 1_2:-68341264 | Msa0087390:CDS |
| ATGTATATAAAACTAGAAAT+TGG | 0.342678 | 1_2:-68340740 | Msa0087390:three_prime_UTR |
| AGGCTTCTGAAGATGCTAAA+AGG | 0.361461 | 1_2:-68345277 | Msa0087390:five_prime_UTR |
| TAGAGTGAATAGATCCATTA+AGG | 0.364253 | 1_2:-68345617 | Msa0087390:intron |
| GAAGTGGATAAAATGTAATT+AGG | 0.364263 | 1_2:-68346930 | Msa0087390:five_prime_UTR |
| TTGATTATTGTGTCTTTGTC+TGG | 0.366889 | 1_2:-68344413 | Msa0087390:five_prime_UTR |
| GAGGGAAGAAATGAGGAAAA+TGG | 0.370367 | 1_2:+68348010 | None:intergenic |
| TGCTCTAGCACTCTCGATTT+CGG | 0.373790 | 1_2:+68345223 | None:intergenic |
| GTGAAACCCGTATTTGGGTC+AGG | 0.375750 | 1_2:-68346857 | Msa0087390:five_prime_UTR |
| ATTTCTCCACATCAGTCATT+AGG | 0.377424 | 1_2:+68340815 | None:intergenic |
| GTTTGGTATCACTTAACAAT+AGG | 0.386577 | 1_2:-68346627 | Msa0087390:intron |
| AGATGAATTGGCAGCTCTGC+AGG | 0.394946 | 1_2:-68341120 | Msa0087390:CDS |
| TTTATGCAGTTATCTATTCA+AGG | 0.401802 | 1_2:-68343878 | Msa0087390:five_prime_UTR |
| ATTAAGCAATGTACCTTACT+TGG | 0.401978 | 1_2:+68344857 | None:intergenic |
| TCGTCTACAGACTTCAAATC+TGG | 0.404710 | 1_2:+68346719 | None:intergenic |
| GTCCTAGAAGAAAATTGTAT+TGG | 0.408585 | 1_2:+68343801 | None:intergenic |
| GACTCCTGAGGAAGATGAAT+TGG | 0.412289 | 1_2:-68341132 | Msa0087390:CDS |
| TTTCCTCATTTCTTCCCTCT+AGG | 0.416559 | 1_2:-68348006 | Msa0087390:five_prime_UTR |
| AAATAAGCAGCTGCACCAAT+TGG | 0.420089 | 1_2:+68341727 | None:intergenic |
| CATTAGTGTAAGTGTAATCA+TGG | 0.422986 | 1_2:-68347558 | Msa0087390:five_prime_UTR |
| ATGAGGAAAATGGAGCTTGC+TGG | 0.428308 | 1_2:+68348020 | None:intergenic |
| GTTTGGTGAAACCCGTATTT+GGG | 0.428708 | 1_2:-68346862 | Msa0087390:five_prime_UTR |
| ACGCAGCTCCTGCCATGGTC+AGG | 0.431291 | 1_2:-68344483 | Msa0087390:intron |
| GAACAAGAGAAGGGAGGGAG+AGG | 0.434349 | 1_2:-68348129 | Msa0087390:five_prime_UTR |
| TTCCTCATTTCTTCCCTCTA+GGG | 0.441092 | 1_2:-68348005 | Msa0087390:five_prime_UTR |
| ACAGTAGATGCGTTAAGAAC+AGG | 0.444660 | 1_2:-68341970 | Msa0087390:CDS |
| GTGGAGCCCTGACCCAAATA+CGG | 0.447768 | 1_2:+68346850 | None:intergenic |
| GAGTGCTAGAGCAGTGGTGC+TGG | 0.451158 | 1_2:-68345213 | Msa0087390:five_prime_UTR |
| TAATAGATGATAATGTTAGA+AGG | 0.453601 | 1_2:-68342012 | Msa0087390:intron |
| AACAGAAGCCTGACCATGGC+AGG | 0.456614 | 1_2:+68344475 | None:intergenic |
| CAGAATTTGAGGGAGGGGAG+TGG | 0.461437 | 1_2:-68345791 | Msa0087390:five_prime_UTR |
| TACACAAGCTTCTAAACCAC+AGG | 0.464474 | 1_2:-68345156 | Msa0087390:intron |
| GGCAGCTCTGCAGGCTGAGA+TGG | 0.469864 | 1_2:-68341111 | Msa0087390:CDS |
| ACAATGAAATTGGTAGTGAA+TGG | 0.480345 | 1_2:-68343780 | Msa0087390:CDS |
| AAATCTGTCGGTTGTGTCAC+GGG | 0.480701 | 1_2:+68341063 | None:intergenic |
| AATTTCCCTTCTTCCTCCAT+CGG | 0.481569 | 1_2:+68348090 | None:intergenic |
| TTTGGTTCAATATGGTAATG+AGG | 0.482030 | 1_2:-68347899 | Msa0087390:five_prime_UTR |
| TGTGAAATTATTGAATAGAC+TGG | 0.484250 | 1_2:-68340766 | Msa0087390:three_prime_UTR |
| TGATGCAGATGGAAAGAAGA+AGG | 0.484697 | 1_2:-68347512 | Msa0087390:five_prime_UTR |
| GGAGTCGGCTTTGCAGGAAC+AGG | 0.488105 | 1_2:+68341149 | None:intergenic |
| AAGAAGCCGATGGAGGAAGA+AGG | 0.488234 | 1_2:-68348096 | Msa0087390:five_prime_UTR |
| GATGGAAAGAAGAAGGAAGA+AGG | 0.490833 | 1_2:-68347505 | Msa0087390:five_prime_UTR |
| AAACAGAACAAGAGAAGGGA+GGG | 0.492474 | 1_2:-68348134 | Msa0087390:five_prime_UTR |
| TTTGCAGGAACAGGACGTGC+AGG | 0.493724 | 1_2:+68341158 | None:intergenic |
| ATGGAAAGAAGAAGGAAGAA+GGG | 0.501486 | 1_2:-68347504 | Msa0087390:five_prime_UTR |
| GAATGGATCGTCTATAACTC+AGG | 0.502272 | 1_2:-68343763 | Msa0087390:intron |
| TTCTGAAGATGCTAAAAGGT+TGG | 0.504212 | 1_2:-68345273 | Msa0087390:five_prime_UTR |
| GATTAGGGCAAGGGCAGAAG+TGG | 0.505950 | 1_2:-68346946 | Msa0087390:five_prime_UTR |
| TTAGGTGGTATAGGTACAAA+GGG | 0.506162 | 1_2:-68345456 | Msa0087390:intron |
| AAGTCTCTGGAATGTAAGAT+TGG | 0.506757 | 1_2:-68344360 | Msa0087390:five_prime_UTR |
| CCAGCTGAGACATGCACTGT+GGG | 0.507614 | 1_2:+68341188 | None:intergenic |
| CTGTCAGGATGTGGATGGAC+TGG | 0.508897 | 1_2:-68344924 | Msa0087390:intron |
| GTAATCATGGGATCTTAATA+CGG | 0.512460 | 1_2:-68347545 | Msa0087390:five_prime_UTR |
| GAGACATGCACTGTGGGAGC+AGG | 0.513136 | 1_2:+68341194 | None:intergenic |
| GAAGCATTGTCAGCTCCAAT+TGG | 0.513583 | 1_2:-68341742 | Msa0087390:CDS |
| ATGTAAGATTGGAGGTGAGT+GGG | 0.516033 | 1_2:-68344349 | Msa0087390:five_prime_UTR |
| AGAATTGGAGAATGCTGAGT+TGG | 0.518601 | 1_2:-68341249 | Msa0087390:CDS |
| TGGAGCCCTGACCCAAATAC+GGG | 0.520475 | 1_2:+68346851 | None:intergenic |
| TGTATTGGCTACCCAGATAG+AGG | 0.520594 | 1_2:+68343816 | None:intergenic |
| CTGTTCATTTATCTCGTCCA+TGG | 0.520922 | 1_2:+68341789 | None:intergenic |
| GGGAATGCATTGTTCAAAGC+TGG | 0.521453 | 1_2:-68347484 | Msa0087390:intron |
| AGCAGTGGTGCTGGGAATTG+GGG | 0.521566 | 1_2:-68345204 | Msa0087390:five_prime_UTR |
| ATTGCTGCATCAGCCAAGTA+AGG | 0.523393 | 1_2:-68344870 | Msa0087390:intron |
| TCTTACTGTCAGGATGTGGA+TGG | 0.524962 | 1_2:-68344929 | Msa0087390:intron |
| CCACAGTGCATGTCTCAGCT+GGG | 0.525773 | 1_2:-68341187 | Msa0087390:CDS |
| TGTGCAAGTAGACAAGTCTC+TGG | 0.525821 | 1_2:-68344373 | Msa0087390:five_prime_UTR |
| GCTGCCAATTCATCTTCCTC+AGG | 0.526016 | 1_2:+68341128 | None:intergenic |
| CGCATCTACTGTTTCCGTGG+TGG | 0.528888 | 1_2:+68341981 | None:intergenic |
| TTTAGGTGGTATAGGTACAA+AGG | 0.530695 | 1_2:-68345457 | Msa0087390:intron |
| AACAGGAGCAACTACTATGA+AGG | 0.534991 | 1_2:-68341953 | Msa0087390:CDS |
| TTCACACATACAAAGCCAAA+AGG | 0.535635 | 1_2:+68340783 | None:intergenic |
| CACCATTGCATCCTCTATCT+GGG | 0.536277 | 1_2:-68343827 | Msa0087390:five_prime_UTR |
| TGATTGTGTAGGTATGAAGA+GGG | 0.537685 | 1_2:-68347595 | Msa0087390:intron |
| GCTGAGATGGCACTTTGAGC+GGG | 0.538605 | 1_2:-68341098 | Msa0087390:exon |
| TGTGGATGGACTGGTGGAAG+AGG | 0.543368 | 1_2:-68344915 | Msa0087390:five_prime_UTR |
| CAAATCTGTCGGTTGTGTCA+CGG | 0.546560 | 1_2:+68341062 | None:intergenic |
| TGTAAGATTGGAGGTGAGTG+GGG | 0.547949 | 1_2:-68344348 | Msa0087390:five_prime_UTR |
| AAAGTGATTATGGAGGATTA+GGG | 0.548430 | 1_2:-68346961 | Msa0087390:five_prime_UTR |
| AATTCATCTTCCTCAGGAGT+CGG | 0.548839 | 1_2:+68341134 | None:intergenic |
| GGCTGAGATGGCACTTTGAG+CGG | 0.549673 | 1_2:-68341099 | Msa0087390:exon |
| TCTCTGGAATGTAAGATTGG+AGG | 0.556277 | 1_2:-68344357 | Msa0087390:five_prime_UTR |
| TGAAACCCGTATTTGGGTCA+GGG | 0.556598 | 1_2:-68346856 | Msa0087390:five_prime_UTR |
| GAGAAAAGCTGCGCCCTAGA+GGG | 0.557343 | 1_2:+68347992 | None:intergenic |
| CAATATGGTAATGAGGAACA+AGG | 0.557967 | 1_2:-68347892 | Msa0087390:five_prime_UTR |
| TAACGCATCTACTGTTTCCG+TGG | 0.562190 | 1_2:+68341978 | None:intergenic |
| GTGATCTCAGTTAGCTGATG+AGG | 0.564079 | 1_2:+68344441 | None:intergenic |
| TTGATTGTGTAGGTATGAAG+AGG | 0.565183 | 1_2:-68347596 | Msa0087390:intron |
| GATAAATAACACAAATCTGT+CGG | 0.566709 | 1_2:+68341051 | None:intergenic |
| ATCTAGAATCTCATGCATGT+TGG | 0.566933 | 1_2:-68347936 | Msa0087390:five_prime_UTR |
| TTTCAACGCAGCTCCTGCCA+TGG | 0.567402 | 1_2:-68344488 | Msa0087390:intron |
| GTCTAAACAATCTGAACCAA+AGG | 0.568231 | 1_2:-68345386 | Msa0087390:intron |
| CGCCCTAGAGGGAAGAAATG+AGG | 0.568469 | 1_2:+68348003 | None:intergenic |
| AGTGCTAGAGCAGTGGTGCT+GGG | 0.572493 | 1_2:-68345212 | Msa0087390:five_prime_UTR |
| AAAACAGAACAAGAGAAGGG+AGG | 0.572895 | 1_2:-68348135 | Msa0087390:five_prime_UTR |
| GTACAAATTACAATATGTCA+TGG | 0.575197 | 1_2:+68340837 | None:intergenic |
| AGAAGCCGATGGAGGAAGAA+GGG | 0.579655 | 1_2:-68348095 | Msa0087390:five_prime_UTR |
| AGGTACAAAGGGAATGATGA+TGG | 0.582511 | 1_2:-68345445 | Msa0087390:five_prime_UTR |
| GAAGAGAAGATTGATGCAGA+TGG | 0.586097 | 1_2:-68347523 | Msa0087390:five_prime_UTR |
| AGAAGAAGAAAAGAAGCCGA+TGG | 0.589158 | 1_2:-68348106 | Msa0087390:five_prime_UTR |
| TGAGAAGGAGAAATTTGAAG+AGG | 0.591853 | 1_2:-68345747 | Msa0087390:intron |
| TTGACAGAAAGTGATTATGG+AGG | 0.592168 | 1_2:-68346968 | Msa0087390:five_prime_UTR |
| GATGGTACTGATCAAGTTAG+TGG | 0.592941 | 1_2:-68345427 | Msa0087390:five_prime_UTR |
| GATTATGGAGGATTAGGGCA+AGG | 0.593112 | 1_2:-68346956 | Msa0087390:five_prime_UTR |
| TCCTGCAAAGCCGACTCCTG+AGG | 0.597589 | 1_2:-68341144 | Msa0087390:CDS |
| AAATCATGTGCAAAATGAGA+AGG | 0.599565 | 1_2:-68345762 | Msa0087390:five_prime_UTR |
| ATTAGTGTAAGTGTAATCAT+GGG | 0.602992 | 1_2:-68347557 | Msa0087390:five_prime_UTR |
| TACCCAGATAGAGGATGCAA+TGG | 0.605941 | 1_2:+68343825 | None:intergenic |
| AGGGAAATTACTAACATGCA+AGG | 0.607987 | 1_2:-68348076 | Msa0087390:five_prime_UTR |
| ATTATGGAGGATTAGGGCAA+GGG | 0.614760 | 1_2:-68346955 | Msa0087390:five_prime_UTR |
| GAATGCTTTGCAAAGCACAC+AGG | 0.619300 | 1_2:-68344326 | Msa0087390:intron |
| AATGTAAGATTGGAGGTGAG+TGG | 0.623493 | 1_2:-68344350 | Msa0087390:five_prime_UTR |
| TCAGGATGTGGATGGACTGG+TGG | 0.623988 | 1_2:-68344921 | Msa0087390:intron |
| AGAGAAAAGCTGCGCCCTAG+AGG | 0.628614 | 1_2:+68347991 | None:intergenic |
| AGTGGTGCTGGGAATTGGGG+AGG | 0.632259 | 1_2:-68345201 | Msa0087390:five_prime_UTR |
| TGCTGATTGAGATACAAGCT+AGG | 0.637085 | 1_2:-68346906 | Msa0087390:five_prime_UTR |
| CCCAGCTGAGACATGCACTG+TGG | 0.640471 | 1_2:+68341187 | None:intergenic |
| ATGGAAGACACTTATCGTCA+CGG | 0.650185 | 1_2:+68340856 | None:intergenic |
| TGATGATGTCGACAAGACCA+TGG | 0.653403 | 1_2:-68341806 | Msa0087390:CDS |
| ACTGGTGGAAGAGGTTCAAG+AGG | 0.653599 | 1_2:-68344906 | Msa0087390:five_prime_UTR |
| AGAAGAAAAGAAGCCGATGG+AGG | 0.664009 | 1_2:-68348103 | Msa0087390:five_prime_UTR |
| AATCGAGAGTGCTAGAGCAG+TGG | 0.666858 | 1_2:-68345219 | Msa0087390:five_prime_UTR |
| GGAGCAGGAGCTGTAAATGT+TGG | 0.671498 | 1_2:+68341209 | None:intergenic |
| AATATGGTAATGAGGAACAA+GGG | 0.673181 | 1_2:-68347891 | Msa0087390:five_prime_UTR |
| CAGTGCATGTCTCAGCTGGG+AGG | 0.674111 | 1_2:-68341184 | Msa0087390:CDS |
| TTTGTACCTAATGACTGATG+TGG | 0.682819 | 1_2:-68340821 | Msa0087390:three_prime_UTR |
| AGAAGGTGCTAAAGCCACCA+CGG | 0.700426 | 1_2:-68341995 | Msa0087390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATGTAAAAAATAAAT+GGG | - | chr1_2:68341521-68341540 | Msa0087390:intron | 10.0% |
| !! | AAATAAAAAATAAAAACTTG+AGG | - | chr1_2:68342530-68342549 | Msa0087390:intron | 10.0% |
| !! | AATAAAAAATAAAAACTTGA+GGG | - | chr1_2:68342531-68342550 | Msa0087390:intron | 10.0% |
| !! | AAATATGTTAATTTCATATT+TGG | - | chr1_2:68342748-68342767 | Msa0087390:intron | 10.0% |
| !!! | TTATTTTATGTTACTTTAAA+AGG | - | chr1_2:68343180-68343199 | Msa0087390:intron | 10.0% |
| !!! | AAAATTATTTTTGAACAAAA+TGG | + | chr1_2:68346470-68346489 | None:intergenic | 10.0% |
| !! | GAATTGATGTAAAAAATAAA+TGG | - | chr1_2:68341520-68341539 | Msa0087390:intron | 15.0% |
| !!! | GATGTATCATTTTTTTAAAA+TGG | - | chr1_2:68342800-68342819 | Msa0087390:intron | 15.0% |
| !!! | AATATTGGGAATTTATTTTA+AGG | + | chr1_2:68342906-68342925 | None:intergenic | 15.0% |
| !! | TTTCATTTATATATTCACAT+TGG | - | chr1_2:68344089-68344108 | Msa0087390:intron | 15.0% |
| !!! | ATTTTTTTACTTGATGATTT+TGG | - | chr1_2:68346091-68346110 | Msa0087390:intron | 15.0% |
| !!! | CTTTTCATTAAATTTTGTTT+TGG | - | chr1_2:68347377-68347396 | Msa0087390:intron | 15.0% |
| !! | TTGAAATAATAACATTAAAC+AGG | - | chr1_2:68347423-68347442 | Msa0087390:intron | 15.0% |
| !! | TGAAATAATAACATTAAACA+GGG | - | chr1_2:68347424-68347443 | Msa0087390:intron | 15.0% |
| !! | ATGTATATAAAACTAGAAAT+TGG | - | chr1_2:68348137-68348156 | Msa0087390:five_prime_UTR | 15.0% |
| !!! | TTGATGTTGAATTATTTTCT+GGG | - | chr1_2:68341063-68341082 | Msa0087390:three_prime_UTR | 20.0% |
| !!! | ATGTAAAAAATAAATGGGTT+GGG | - | chr1_2:68341526-68341545 | Msa0087390:intron | 20.0% |
| !! | ATCAAAACAACTTATATTCA+TGG | + | chr1_2:68342222-68342241 | None:intergenic | 20.0% |
| !!! | ATATAAGTTGTTTTGAAGTT+TGG | - | chr1_2:68342303-68342322 | Msa0087390:intron | 20.0% |
| !! | TTTCAACTTAATGAATTTAG+TGG | + | chr1_2:68342468-68342487 | None:intergenic | 20.0% |
| !!! | CAAATAGGTATTTTCTATAA+AGG | - | chr1_2:68342615-68342634 | Msa0087390:intron | 20.0% |
| !! | CATCATAAAAGCTAAAATAT+AGG | + | chr1_2:68342784-68342803 | None:intergenic | 20.0% |
| !!! | TAAAATGGTTTTTGAAGAAT+TGG | - | chr1_2:68342815-68342834 | Msa0087390:intron | 20.0% |
| !!! | GTTTCTATAGTTATCTTTTT+TGG | - | chr1_2:68343047-68343066 | Msa0087390:intron | 20.0% |
| !!! | ATTTCTTTTTTCAGAATTTG+AGG | - | chr1_2:68343075-68343094 | Msa0087390:intron | 20.0% |
| !!! | TTTCTTTTTTCAGAATTTGA+GGG | - | chr1_2:68343076-68343095 | Msa0087390:intron | 20.0% |
| !! | TATAAACTTAAAAATCAGGA+GGG | + | chr1_2:68343317-68343336 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGCAACTTGATA+TGG | - | chr1_2:68343358-68343377 | Msa0087390:intron | 20.0% |
| !! | TGAATATATAAATGAAAGAG+AGG | + | chr1_2:68344086-68344105 | None:intergenic | 20.0% |
| !!! | TCTTTTATATCTTCATTACT+TGG | - | chr1_2:68344192-68344211 | Msa0087390:intron | 20.0% |
| !! | GAACAAAAATATAGATCATA+TGG | + | chr1_2:68344696-68344715 | None:intergenic | 20.0% |
| !! | ATATATGTTGAACTTTATGT+GGG | - | chr1_2:68344854-68344873 | Msa0087390:intron | 20.0% |
| !!! | ATTTGTCTTATTTTTGTGTT+TGG | - | chr1_2:68345233-68345252 | Msa0087390:five_prime_UTR | 20.0% |
| !! | AAAATAACCAACGATATTAT+TGG | + | chr1_2:68345405-68345424 | None:intergenic | 20.0% |
| !!! | GTTATGGTAATTTGATTTTA+GGG | - | chr1_2:68345446-68345465 | Msa0087390:five_prime_UTR | 20.0% |
| !! | TAAAATTGATACAATGTTGT+TGG | - | chr1_2:68345652-68345671 | Msa0087390:intron | 20.0% |
| !! | TTGTTTCACAAATTAAAAAC+AGG | + | chr1_2:68345788-68345807 | None:intergenic | 20.0% |
| !! | AATTTAAATCACCTGTTATT+GGG | + | chr1_2:68346254-68346273 | None:intergenic | 20.0% |
| !! | TAATTTAAATCACCTGTTAT+TGG | + | chr1_2:68346255-68346274 | None:intergenic | 20.0% |
| !! | TGATTTAAATTATCAAGTAG+TGG | - | chr1_2:68346263-68346282 | Msa0087390:intron | 20.0% |
| !!! | TAATAGATGATAATGTTAGA+AGG | - | chr1_2:68346865-68346884 | Msa0087390:five_prime_UTR | 20.0% |
| !! | GTGATATATTTAATTGAGTT+TGG | - | chr1_2:68347024-68347043 | Msa0087390:intron | 20.0% |
| !!! | TTTTTGCTTATAATTAAGTC+TGG | + | chr1_2:68347262-68347281 | None:intergenic | 20.0% |
| !!! | ACAACAATCTAAAATAATTC+TGG | + | chr1_2:68347942-68347961 | None:intergenic | 20.0% |
| !!! | TTTTAGATTGTTGTTCTATT+TGG | - | chr1_2:68347948-68347967 | Msa0087390:five_prime_UTR | 20.0% |
| !! | CTTGATGTTGAATTATTTTC+TGG | - | chr1_2:68341062-68341081 | Msa0087390:three_prime_UTR | 25.0% |
| ! | TGTTCATCACAACAAATATT+AGG | - | chr1_2:68341153-68341172 | Msa0087390:CDS | 25.0% |
| !!! | TTTTGTGATTTTGATTGTGT+AGG | - | chr1_2:68341271-68341290 | Msa0087390:CDS | 25.0% |
| ! | ATTAGTGTAAGTGTAATCAT+GGG | - | chr1_2:68341320-68341339 | Msa0087390:intron | 25.0% |
| ! | GATGTAAAAAATAAATGGGT+TGG | - | chr1_2:68341525-68341544 | Msa0087390:intron | 25.0% |
| !!! | TGAATTGATGTTTTAGTGTT+TGG | - | chr1_2:68341677-68341696 | Msa0087390:intron | 25.0% |
| !!! | GAATTGATGTTTTAGTGTTT+GGG | - | chr1_2:68341678-68341697 | Msa0087390:intron | 25.0% |
| !! | GTGAACTGATAAACTATTTT+GGG | - | chr1_2:68341843-68341862 | Msa0087390:intron | 25.0% |
| ! | GAAGTGGATAAAATGTAATT+AGG | - | chr1_2:68341947-68341966 | Msa0087390:CDS | 25.0% |
| !!! | TAGGTATTTTTAAGTTGCTA+AGG | - | chr1_2:68342269-68342288 | Msa0087390:intron | 25.0% |
| ! | AAAAATAAAAACTTGAGGGT+AGG | - | chr1_2:68342535-68342554 | Msa0087390:intron | 25.0% |
| ! | ATGCAAGTAGCAAAATTTAT+AGG | - | chr1_2:68342646-68342665 | Msa0087390:intron | 25.0% |
| ! | TGCAAGTAGCAAAATTTATA+GGG | - | chr1_2:68342647-68342666 | Msa0087390:intron | 25.0% |
| ! | CATAGAAAGACTTTCTTTAT+TGG | + | chr1_2:68342944-68342963 | None:intergenic | 25.0% |
| ! | ACATAATTGAATTCACACAA+GGG | + | chr1_2:68342986-68343005 | None:intergenic | 25.0% |
| ! | TTCAATTATGTCCTTTGATT+TGG | - | chr1_2:68342995-68343014 | Msa0087390:intron | 25.0% |
| !!! | CTATAGTTATCTTTTTTGGT+AGG | - | chr1_2:68343051-68343070 | Msa0087390:intron | 25.0% |
| ! | ATTTGAAGAGGTAATTCTTA+TGG | - | chr1_2:68343142-68343161 | Msa0087390:intron | 25.0% |
| ! | CTATAAACTTAAAAATCAGG+AGG | + | chr1_2:68343318-68343337 | None:intergenic | 25.0% |
| ! | CAGCTATAAACTTAAAAATC+AGG | + | chr1_2:68343321-68343340 | None:intergenic | 25.0% |
| !! | CAAGCTTAAGTTGTTAATTT+GGG | - | chr1_2:68343381-68343400 | Msa0087390:intron | 25.0% |
| !!! | GTTACTTTGTATTGTGTTTT+AGG | - | chr1_2:68343403-68343422 | Msa0087390:intron | 25.0% |
| !!! | TGATTCCATTTTTGTTCTAT+AGG | - | chr1_2:68343580-68343599 | Msa0087390:intron | 25.0% |
| ! | TTGTAGATAACAGTAACAAA+TGG | + | chr1_2:68344057-68344076 | None:intergenic | 25.0% |
| ! | CTAGCAGTGAAAAATAAATA+TGG | - | chr1_2:68344263-68344282 | Msa0087390:intron | 25.0% |
| ! | ATCATCATCAAAACTGTTAA+TGG | - | chr1_2:68344354-68344373 | Msa0087390:five_prime_UTR | 25.0% |
| !!! | GATCTATATTTTTGTTCTTC+CGG | - | chr1_2:68344699-68344718 | Msa0087390:intron | 25.0% |
| ! | CATATATGTTGAACTTTATG+TGG | - | chr1_2:68344853-68344872 | Msa0087390:intron | 25.0% |
| ! | ATGTAAATATTACTGTTTGC+AGG | - | chr1_2:68344955-68344974 | Msa0087390:intron | 25.0% |
| ! | TTTATGCAGTTATCTATTCA+AGG | - | chr1_2:68344999-68345018 | Msa0087390:intron | 25.0% |
| !!! | AAATGCAAATTGTGTTGTTT+TGG | - | chr1_2:68345185-68345204 | Msa0087390:five_prime_UTR | 25.0% |
| ! | GTATTCACTCTTAATATCAT+TGG | + | chr1_2:68345349-68345368 | None:intergenic | 25.0% |
| ! | TGATATTAAGAGTGAATACT+TGG | - | chr1_2:68345350-68345369 | Msa0087390:intron | 25.0% |
| ! | AAGAAAACCAATAATATCGT+TGG | - | chr1_2:68345395-68345414 | Msa0087390:five_prime_UTR | 25.0% |
| !!! | ATATCGTTGGTTATTTTTTG+AGG | - | chr1_2:68345408-68345427 | Msa0087390:five_prime_UTR | 25.0% |
| !!! | TATCGTTGGTTATTTTTTGA+GGG | - | chr1_2:68345409-68345428 | Msa0087390:five_prime_UTR | 25.0% |
| ! | TTTGAGGGAAATAATATTGT+TGG | - | chr1_2:68345424-68345443 | Msa0087390:five_prime_UTR | 25.0% |
| !! | GGAAATAATATTGTTGGTTA+TGG | - | chr1_2:68345430-68345449 | Msa0087390:five_prime_UTR | 25.0% |
| !!! | GGTTATGGTAATTTGATTTT+AGG | - | chr1_2:68345445-68345464 | Msa0087390:five_prime_UTR | 25.0% |
| !! | TTTTACGTGTCTTCAAATTT+AGG | - | chr1_2:68345537-68345556 | Msa0087390:intron | 25.0% |
| ! | TGTGAAACAATTCATAGATT+AGG | - | chr1_2:68345798-68345817 | Msa0087390:five_prime_UTR | 25.0% |
| ! | ATCTATTCCCTTAATTAATG+AGG | - | chr1_2:68345994-68346013 | Msa0087390:intron | 25.0% |
| !!! | CATTTTGATTAAAAGCTGAA+AGG | + | chr1_2:68346212-68346231 | None:intergenic | 25.0% |
| ! | GTATTACTTACTTTAGACAA+TGG | - | chr1_2:68346797-68346816 | Msa0087390:intron | 25.0% |
| !! | ATCAAATATCCTGTTTTCAA+CGG | + | chr1_2:68347217-68347236 | None:intergenic | 25.0% |
| !! | TACGTCAAAAAAGTATAATG+TGG | + | chr1_2:68347320-68347339 | None:intergenic | 25.0% |
| ! | GATAAATAACACAAATCTGT+CGG | + | chr1_2:68347829-68347848 | None:intergenic | 25.0% |
| ! | GACATCAATGTATCATTTAA+CGG | + | chr1_2:68347897-68347916 | None:intergenic | 25.0% |
| ! | GTACAAATTACAATATGTCA+TGG | + | chr1_2:68348043-68348062 | None:intergenic | 25.0% |
| ! | TGTGAAATTATTGAATAGAC+TGG | - | chr1_2:68348111-68348130 | Msa0087390:five_prime_UTR | 25.0% |
| AAGAAAAACAGAACAAGAGA+AGG | - | chr1_2:68340738-68340757 | Msa0087390:three_prime_UTR | 30.0% | |
| AGAAAAACAGAACAAGAGAA+GGG | - | chr1_2:68340739-68340758 | Msa0087390:three_prime_UTR | 30.0% | |
| ! | CTTTTCTCTATTCTGCTATT+GGG | - | chr1_2:68340900-68340919 | Msa0087390:three_prime_UTR | 30.0% |
| ! | TTTTCTCTATTCTGCTATTG+GGG | - | chr1_2:68340901-68340920 | Msa0087390:three_prime_UTR | 30.0% |
| TTGGGGTTTATTTCAGAAAT+TGG | - | chr1_2:68340918-68340937 | Msa0087390:three_prime_UTR | 30.0% | |
| !!! | GTGTTGATTTTGGTTCAATA+TGG | - | chr1_2:68340970-68340989 | Msa0087390:three_prime_UTR | 30.0% |
| ! | TTTGGTTCAATATGGTAATG+AGG | - | chr1_2:68340978-68340997 | Msa0087390:three_prime_UTR | 30.0% |
| ! | AATATGGTAATGAGGAACAA+GGG | - | chr1_2:68340986-68341005 | Msa0087390:three_prime_UTR | 30.0% |
| ACTTGCATGTGATTTATGTT+TGG | - | chr1_2:68341103-68341122 | Msa0087390:CDS | 30.0% | |
| CTTGCATGTGATTTATGTTT+GGG | - | chr1_2:68341104-68341123 | Msa0087390:CDS | 30.0% | |
| TTGCATGTGATTTATGTTTG+GGG | - | chr1_2:68341105-68341124 | Msa0087390:CDS | 30.0% | |
| CATTAGTGTAAGTGTAATCA+TGG | - | chr1_2:68341319-68341338 | Msa0087390:intron | 30.0% | |
| GTAATCATGGGATCTTAATA+CGG | - | chr1_2:68341332-68341351 | Msa0087390:intron | 30.0% | |
| CTACTTTCTAAACAATCTGA+TGG | + | chr1_2:68341632-68341651 | None:intergenic | 30.0% | |
| ! | AAGTAGCAATTAAGTTGTTG+TGG | - | chr1_2:68341646-68341665 | Msa0087390:intron | 30.0% |
| ! | AGTAGCAATTAAGTTGTTGT+GGG | - | chr1_2:68341647-68341666 | Msa0087390:intron | 30.0% |
| TGGCAACTTAAATATAGCAT+TGG | + | chr1_2:68341811-68341830 | None:intergenic | 30.0% | |
| ! | GGTGAACTGATAAACTATTT+TGG | - | chr1_2:68341842-68341861 | Msa0087390:intron | 30.0% |
| AAGTTGACAGAAAGTGATTA+TGG | - | chr1_2:68341906-68341925 | Msa0087390:intron | 30.0% | |
| AAAGTGATTATGGAGGATTA+GGG | - | chr1_2:68341916-68341935 | Msa0087390:intron | 30.0% | |
| ! | TCAAGTGATTTTTGATGCTA+TGG | - | chr1_2:68342085-68342104 | Msa0087390:intron | 30.0% |
| ! | ATGGTTAGCTAACAAAATTC+CGG | - | chr1_2:68342104-68342123 | Msa0087390:intron | 30.0% |
| !!! | TGTTTTGATGTGCTAAAGTT+TGG | - | chr1_2:68342233-68342252 | Msa0087390:intron | 30.0% |
| GTTTGGTATCACTTAACAAT+AGG | - | chr1_2:68342250-68342269 | Msa0087390:intron | 30.0% | |
| ATCTTAATATACATCACGCT+AGG | + | chr1_2:68342389-68342408 | None:intergenic | 30.0% | |
| CACATCATATTCATTGCTTT+AGG | + | chr1_2:68342443-68342462 | None:intergenic | 30.0% | |
| GTAGGATATGAAACTTTGAA+CGG | - | chr1_2:68342553-68342572 | Msa0087390:intron | 30.0% | |
| TAGGATATGAAACTTTGAAC+GGG | - | chr1_2:68342554-68342573 | Msa0087390:intron | 30.0% | |
| CATATTGCCGTAACAAAAAT+AGG | - | chr1_2:68342716-68342735 | Msa0087390:intron | 30.0% | |
| !!! | TGTCAAGCCTATTTTTGTTA+CGG | + | chr1_2:68342726-68342745 | None:intergenic | 30.0% |
| !!! | TTTATTTTAAGGCGAGCAAT+TGG | + | chr1_2:68342895-68342914 | None:intergenic | 30.0% |
| CATGTGTTGGAGATAATATT+GGG | + | chr1_2:68342920-68342939 | None:intergenic | 30.0% | |
| TCATGTGTTGGAGATAATAT+TGG | + | chr1_2:68342921-68342940 | None:intergenic | 30.0% | |
| TTTCTTTATTGGTCATGTGT+TGG | + | chr1_2:68342933-68342952 | None:intergenic | 30.0% | |
| GACATAATTGAATTCACACA+AGG | + | chr1_2:68342987-68343006 | None:intergenic | 30.0% | |
| !! | AATTATGTCCTTTGATTTGG+TGG | - | chr1_2:68342998-68343017 | Msa0087390:intron | 30.0% |
| AATGAAATCCACCAAATCAA+AGG | + | chr1_2:68343009-68343028 | None:intergenic | 30.0% | |
| !! | ATTTGGTGGATTTCATTTCT+TGG | - | chr1_2:68343012-68343031 | Msa0087390:intron | 30.0% |
| !!! | TTTTTTCAGAATTTGAGGGA+GGG | - | chr1_2:68343080-68343099 | Msa0087390:intron | 30.0% |
| AAATCATGTGCAAAATGAGA+AGG | - | chr1_2:68343115-68343134 | Msa0087390:intron | 30.0% | |
| TAGAGTGAATAGATCCATTA+AGG | - | chr1_2:68343260-68343279 | Msa0087390:intron | 30.0% | |
| ! | GCAAGCTTAAGTTGTTAATT+TGG | - | chr1_2:68343380-68343399 | Msa0087390:intron | 30.0% |
| !! | ACTTTGTATTGTGTTTTAGG+TGG | - | chr1_2:68343406-68343425 | Msa0087390:intron | 30.0% |
| !! | TATTGTGTTTTAGGTGGTAT+AGG | - | chr1_2:68343412-68343431 | Msa0087390:intron | 30.0% |
| ! | TATTGTTGTAGCACTTTTGA+TGG | - | chr1_2:68343547-68343566 | Msa0087390:intron | 30.0% |
| AGAAGCCTATAGAACAAAAA+TGG | + | chr1_2:68343588-68343607 | None:intergenic | 30.0% | |
| AGTTAACGTAACATAATAGC+TGG | + | chr1_2:68343904-68343923 | None:intergenic | 30.0% | |
| ! | TTTTGTGTTTTCTTACTGTC+AGG | - | chr1_2:68343938-68343957 | Msa0087390:intron | 30.0% |
| ATTAAGCAATGTACCTTACT+TGG | + | chr1_2:68344023-68344042 | None:intergenic | 30.0% | |
| TCATTACTTGGACTATGAAT+AGG | - | chr1_2:68344204-68344223 | Msa0087390:intron | 30.0% | |
| CATTACTTGGACTATGAATA+GGG | - | chr1_2:68344205-68344224 | Msa0087390:intron | 30.0% | |
| TTGATTATTGTGTCTTTGTC+TGG | - | chr1_2:68344464-68344483 | Msa0087390:five_prime_UTR | 30.0% | |
| TAACAGCAAGAATTAGACAT+TGG | + | chr1_2:68344588-68344607 | None:intergenic | 30.0% | |
| !! | ATATTTTTGTTCTTCCGGAA+AGG | - | chr1_2:68344704-68344723 | Msa0087390:intron | 30.0% |
| TCTAGCATTATGCATTGTTT+GGG | - | chr1_2:68344740-68344759 | Msa0087390:intron | 30.0% | |
| ! | TTTTCTTGAAGCACAAAACT+GGG | + | chr1_2:68344774-68344793 | None:intergenic | 30.0% |
| ! | ATTTTCTTGAAGCACAAAAC+TGG | + | chr1_2:68344775-68344794 | None:intergenic | 30.0% |
| CTCTATACCATCATTTAATC+AGG | - | chr1_2:68344908-68344927 | Msa0087390:five_prime_UTR | 30.0% | |
| TACCATCATTTAATCAGGTT+TGG | - | chr1_2:68344913-68344932 | Msa0087390:five_prime_UTR | 30.0% | |
| TTCCAAACCTGATTAAATGA+TGG | + | chr1_2:68344918-68344937 | None:intergenic | 30.0% | |
| ! | AGCCAATACAATTTTCTTCT+AGG | - | chr1_2:68345074-68345093 | Msa0087390:intron | 30.0% |
| GTCCTAGAAGAAAATTGTAT+TGG | + | chr1_2:68345079-68345098 | None:intergenic | 30.0% | |
| !! | TTCTTCTAGGACAATGAAAT+TGG | - | chr1_2:68345087-68345106 | Msa0087390:intron | 30.0% |
| !! | ACAATGAAATTGGTAGTGAA+TGG | - | chr1_2:68345097-68345116 | Msa0087390:intron | 30.0% |
| !!! | ATTGTGTTGTTTTGGTCATT+TGG | - | chr1_2:68345193-68345212 | Msa0087390:five_prime_UTR | 30.0% |
| ACTATGTATAAACCCAAATC+TGG | - | chr1_2:68345756-68345775 | Msa0087390:five_prime_UTR | 30.0% | |
| TTTGTGAAAAGAATTGTCCA+TGG | - | chr1_2:68345835-68345854 | Msa0087390:intron | 30.0% | |
| TGTATTCACCAGATTAATGT+GGG | - | chr1_2:68345937-68345956 | Msa0087390:intron | 30.0% | |
| TATTCCCTTAATTAATGAGG+CGG | - | chr1_2:68345997-68346016 | Msa0087390:intron | 30.0% | |
| !! | AGTTTAAGTTGCTCTAAATG+GGG | + | chr1_2:68346060-68346079 | None:intergenic | 30.0% |
| !! | GAGTTTAAGTTGCTCTAAAT+GGG | + | chr1_2:68346061-68346080 | None:intergenic | 30.0% |
| !! | AGAGTTTAAGTTGCTCTAAA+TGG | + | chr1_2:68346062-68346081 | None:intergenic | 30.0% |
| TTTGGATGTACCAATTGATT+AGG | - | chr1_2:68346109-68346128 | Msa0087390:intron | 30.0% | |
| ATATAGAGAGCCTAATCAAT+TGG | + | chr1_2:68346122-68346141 | None:intergenic | 30.0% | |
| ATTAAAAGCTGAAAGGATAG+CGG | + | chr1_2:68346205-68346224 | None:intergenic | 30.0% | |
| TTTATAACATAAGCTGCAGT+TGG | - | chr1_2:68346526-68346545 | Msa0087390:intron | 30.0% | |
| CAAGAAAGAAAGAATATACC+AGG | - | chr1_2:68346580-68346599 | Msa0087390:intron | 30.0% | |
| TAGAACCACTCTGATTAATA+GGG | + | chr1_2:68346614-68346633 | None:intergenic | 30.0% | |
| ATAGAACCACTCTGATTAAT+AGG | + | chr1_2:68346615-68346634 | None:intergenic | 30.0% | |
| ! | AGTTGAGAAATGTACTCTTT+TGG | - | chr1_2:68346639-68346658 | Msa0087390:five_prime_UTR | 30.0% |
| ! | TTTTTCCTTAATACCCAACT+TGG | + | chr1_2:68346761-68346780 | None:intergenic | 30.0% |
| ! | TAATCTTCTTTTTCCCCTTA+TGG | - | chr1_2:68346830-68346849 | Msa0087390:intron | 30.0% |
| TACAAAAATCACCACCATAA+GGG | + | chr1_2:68346847-68346866 | None:intergenic | 30.0% | |
| TTACAAAAATCACCACCATA+AGG | + | chr1_2:68346848-68346867 | None:intergenic | 30.0% | |
| ! | TTTGGAACATATTTCATCGA+AGG | - | chr1_2:68347395-68347414 | Msa0087390:intron | 30.0% |
| ! | ATTTTGTCTATATTGAGTCC+AGG | - | chr1_2:68347460-68347479 | Msa0087390:intron | 30.0% |
| ! | TTTTGTCTATATTGAGTCCA+GGG | - | chr1_2:68347461-68347480 | Msa0087390:intron | 30.0% |
| TTTCAGATTGAACACATGTT+TGG | + | chr1_2:68347521-68347540 | None:intergenic | 30.0% | |
| ! | ATGTGTTCAATCTGAAATGT+TGG | - | chr1_2:68347524-68347543 | Msa0087390:five_prime_UTR | 30.0% |
| AATAAATTCAGAATGCCACA+TGG | + | chr1_2:68347574-68347593 | None:intergenic | 30.0% | |
| !!! | TGTTCTATTTGGTTTTGCAA+CGG | - | chr1_2:68347959-68347978 | Msa0087390:five_prime_UTR | 30.0% |
| TAACAAAACCAGCAAAATTC+TGG | + | chr1_2:68348000-68348019 | None:intergenic | 30.0% | |
| AGGGAAATTACTAACATGCA+AGG | - | chr1_2:68340801-68340820 | Msa0087390:three_prime_UTR | 35.0% | |
| ! | GCTTTTCTCTATTCTGCTAT+TGG | - | chr1_2:68340899-68340918 | Msa0087390:three_prime_UTR | 35.0% |
| ! | ATCTAGAATCTCATGCATGT+TGG | - | chr1_2:68340941-68340960 | Msa0087390:three_prime_UTR | 35.0% |
| !!! | TTGGTTTCTGGTGTTGATTT+TGG | - | chr1_2:68340960-68340979 | Msa0087390:three_prime_UTR | 35.0% |
| ! | CAATATGGTAATGAGGAACA+AGG | - | chr1_2:68340985-68341004 | Msa0087390:three_prime_UTR | 35.0% |
| ! | ATGTGATTTATGTTTGGGGT+TGG | - | chr1_2:68341109-68341128 | Msa0087390:CDS | 35.0% |
| TTGATTGTGTAGGTATGAAG+AGG | - | chr1_2:68341281-68341300 | Msa0087390:intron | 35.0% | |
| TGATTGTGTAGGTATGAAGA+GGG | - | chr1_2:68341282-68341301 | Msa0087390:intron | 35.0% | |
| ATGGAAAGAAGAAGGAAGAA+GGG | - | chr1_2:68341373-68341392 | Msa0087390:intron | 35.0% | |
| !! | AAAAATAAATGGGTTGGGAG+TGG | - | chr1_2:68341531-68341550 | Msa0087390:intron | 35.0% |
| ! | GTAGCAATTAAGTTGTTGTG+GGG | - | chr1_2:68341648-68341667 | Msa0087390:intron | 35.0% |
| ! | TGTTTTGCAGAAGCTTAAGT+TGG | - | chr1_2:68341743-68341762 | Msa0087390:CDS | 35.0% |
| AATACAAGTTGTTGCAGGTA+TGG | - | chr1_2:68341766-68341785 | Msa0087390:CDS | 35.0% | |
| TAAGTTGCCATATGAGTAGT+TGG | - | chr1_2:68341821-68341840 | Msa0087390:intron | 35.0% | |
| TTGACAGAAAGTGATTATGG+AGG | - | chr1_2:68341909-68341928 | Msa0087390:intron | 35.0% | |
| GAAAGTGATTATGGAGGATT+AGG | - | chr1_2:68341915-68341934 | Msa0087390:intron | 35.0% | |
| !! | AGCTAGGAATAAGCTGTTTT+TGG | - | chr1_2:68341987-68342006 | Msa0087390:CDS | 35.0% |
| !!! | AGCTGTTTTTGGAAGAAGTT+TGG | - | chr1_2:68341998-68342017 | Msa0087390:CDS | 35.0% |
| !! | GTGAGTTCTTACTGTTTTAG+TGG | + | chr1_2:68342049-68342068 | None:intergenic | 35.0% |
| TCACTTGATTCCAAGTTACA+GGG | + | chr1_2:68342073-68342092 | None:intergenic | 35.0% | |
| ATCACTTGATTCCAAGTTAC+AGG | + | chr1_2:68342074-68342093 | None:intergenic | 35.0% | |
| ! | TAACAAAATTCCGGACGTTT+TGG | - | chr1_2:68342113-68342132 | Msa0087390:intron | 35.0% |
| !!! | GGTACCAGTTTCATTGATTT+TGG | - | chr1_2:68342134-68342153 | Msa0087390:intron | 35.0% |
| TGGACCAAAATCAATGAAAC+TGG | + | chr1_2:68342141-68342160 | None:intergenic | 35.0% | |
| !!! | TCTGTAGACGATTTTGAAGT+TGG | - | chr1_2:68342170-68342189 | Msa0087390:intron | 35.0% |
| !!! | CTGTAGACGATTTTGAAGTT+GGG | - | chr1_2:68342171-68342190 | Msa0087390:intron | 35.0% |
| !!! | TGTAGACGATTTTGAAGTTG+GGG | - | chr1_2:68342172-68342191 | Msa0087390:intron | 35.0% |
| TTGATGTAGAGCATGAACTT+CGG | + | chr1_2:68342598-68342617 | None:intergenic | 35.0% | |
| GTTCATGCTCTACATCAAAT+AGG | - | chr1_2:68342600-68342619 | Msa0087390:intron | 35.0% | |
| CGAGCAATTGGTTAAATTTC+TGG | + | chr1_2:68342883-68342902 | None:intergenic | 35.0% | |
| !! | CATTTCTTGGTTTGTGACTA+TGG | - | chr1_2:68343025-68343044 | Msa0087390:intron | 35.0% |
| !!! | CTTTTTTCAGAATTTGAGGG+AGG | - | chr1_2:68343079-68343098 | Msa0087390:intron | 35.0% |
| !! | TTTTTCAGAATTTGAGGGAG+GGG | - | chr1_2:68343081-68343100 | Msa0087390:intron | 35.0% |
| ! | CTCATTTTGCACATGATTTG+AGG | + | chr1_2:68343114-68343133 | None:intergenic | 35.0% |
| TGAGAAGGAGAAATTTGAAG+AGG | - | chr1_2:68343130-68343149 | Msa0087390:intron | 35.0% | |
| TTTAGGTGGTATAGGTACAA+AGG | - | chr1_2:68343420-68343439 | Msa0087390:intron | 35.0% | |
| TTAGGTGGTATAGGTACAAA+GGG | - | chr1_2:68343421-68343440 | Msa0087390:intron | 35.0% | |
| GTCTAAACAATCTGAACCAA+AGG | - | chr1_2:68343491-68343510 | Msa0087390:intron | 35.0% | |
| TTAGTGGTGTTTAGTGGTTA+AGG | - | chr1_2:68343514-68343533 | Msa0087390:intron | 35.0% | |
| ! | TTCTGAAGATGCTAAAAGGT+TGG | - | chr1_2:68343604-68343623 | Msa0087390:intron | 35.0% |
| AATTGTGCAATCAAAGAGCA+TGG | + | chr1_2:68343752-68343771 | None:intergenic | 35.0% | |
| !! | AAGTCTCTGGAATGTAAGAT+TGG | - | chr1_2:68344517-68344536 | Msa0087390:intron | 35.0% |
| !! | TCTAATTCTTGCTGTTACTG+AGG | - | chr1_2:68344591-68344610 | Msa0087390:intron | 35.0% |
| CTCTAGCATTATGCATTGTT+TGG | - | chr1_2:68344739-68344758 | Msa0087390:intron | 35.0% | |
| CAAAGAGCTCTTTACTCTTT+AGG | + | chr1_2:68345596-68345615 | None:intergenic | 35.0% | |
| GTGTATTCACCAGATTAATG+TGG | - | chr1_2:68345936-68345955 | Msa0087390:intron | 35.0% | |
| GTATTCACCAGATTAATGTG+GGG | - | chr1_2:68345938-68345957 | Msa0087390:intron | 35.0% | |
| AAGTCCGCCTCATTAATTAA+GGG | + | chr1_2:68346004-68346023 | None:intergenic | 35.0% | |
| CTCAACACAATTAATCAGAG+TGG | + | chr1_2:68346149-68346168 | None:intergenic | 35.0% | |
| GCATAAAAGTTCCCAATAAC+AGG | - | chr1_2:68346240-68346259 | Msa0087390:intron | 35.0% | |
| TGTTCAACATCTTGATATGC+AGG | + | chr1_2:68346383-68346402 | None:intergenic | 35.0% | |
| GTACAATTCACATTCTTCGA+AGG | + | chr1_2:68346416-68346435 | None:intergenic | 35.0% | |
| AAGAAACTTCTGCATTGTGT+AGG | + | chr1_2:68346508-68346527 | None:intergenic | 35.0% | |
| ACAAAAATCACCACCATAAG+GGG | + | chr1_2:68346846-68346865 | None:intergenic | 35.0% | |
| TTGTTATGTCCGTTGAAAAC+AGG | - | chr1_2:68347205-68347224 | Msa0087390:intron | 35.0% | |
| TAAGTCTGGAGAGAATCAAA+AGG | + | chr1_2:68347248-68347267 | None:intergenic | 35.0% | |
| AACATTAAACAGGGTGAAGT+TGG | - | chr1_2:68347433-68347452 | Msa0087390:intron | 35.0% | |
| TTTGTACCTAATGACTGATG+TGG | - | chr1_2:68348056-68348075 | Msa0087390:five_prime_UTR | 35.0% | |
| ATTTCTCCACATCAGTCATT+AGG | + | chr1_2:68348065-68348084 | None:intergenic | 35.0% | |
| ! | AGAAATCTGCTTCTTCCTTT+TGG | - | chr1_2:68348079-68348098 | Msa0087390:five_prime_UTR | 35.0% |
| TTCACACATACAAAGCCAAA+AGG | + | chr1_2:68348097-68348116 | None:intergenic | 35.0% | |
| AAAACAGAACAAGAGAAGGG+AGG | - | chr1_2:68340742-68340761 | Msa0087390:three_prime_UTR | 40.0% | |
| AAACAGAACAAGAGAAGGGA+GGG | - | chr1_2:68340743-68340762 | Msa0087390:three_prime_UTR | 40.0% | |
| AGAAGAAGAAAAGAAGCCGA+TGG | - | chr1_2:68340771-68340790 | Msa0087390:three_prime_UTR | 40.0% | |
| AATTTCCCTTCTTCCTCCAT+CGG | + | chr1_2:68340790-68340809 | None:intergenic | 40.0% | |
| GAGGGAAGAAATGAGGAAAA+TGG | + | chr1_2:68340870-68340889 | None:intergenic | 40.0% | |
| TTTCCTCATTTCTTCCCTCT+AGG | - | chr1_2:68340871-68340890 | Msa0087390:three_prime_UTR | 40.0% | |
| TTCCTCATTTCTTCCCTCTA+GGG | - | chr1_2:68340872-68340891 | Msa0087390:three_prime_UTR | 40.0% | |
| !! | ATCTCATGCATGTTGGTTTC+TGG | - | chr1_2:68340948-68340967 | Msa0087390:three_prime_UTR | 40.0% |
| ! | GAGCTAATGTCATGCTTTTC+AGG | - | chr1_2:68341013-68341032 | Msa0087390:three_prime_UTR | 40.0% |
| !!! | TGGGGTTGGAATTTTGATTC+TGG | - | chr1_2:68341123-68341142 | Msa0087390:CDS | 40.0% |
| GAAGAGAAGATTGATGCAGA+TGG | - | chr1_2:68341354-68341373 | Msa0087390:intron | 40.0% | |
| TGATGCAGATGGAAAGAAGA+AGG | - | chr1_2:68341365-68341384 | Msa0087390:intron | 40.0% | |
| GATGGAAAGAAGAAGGAAGA+AGG | - | chr1_2:68341372-68341391 | Msa0087390:intron | 40.0% | |
| GAGACATTACCTCAAACACT+TGG | + | chr1_2:68341563-68341582 | None:intergenic | 40.0% | |
| GTTGGAATACAAGTTGTTGC+AGG | - | chr1_2:68341761-68341780 | Msa0087390:CDS | 40.0% | |
| CAGTTCACCAACTACTCATA+TGG | + | chr1_2:68341831-68341850 | None:intergenic | 40.0% | |
| ATTATGGAGGATTAGGGCAA+GGG | - | chr1_2:68341922-68341941 | Msa0087390:intron | 40.0% | |
| ! | TGCTGATTGAGATACAAGCT+AGG | - | chr1_2:68341971-68341990 | Msa0087390:CDS | 40.0% |
| ! | AGTTTGGTGAAACCCGTATT+TGG | - | chr1_2:68342014-68342033 | Msa0087390:intron | 40.0% |
| ! | GTTTGGTGAAACCCGTATTT+GGG | - | chr1_2:68342015-68342034 | Msa0087390:intron | 40.0% |
| TCGTCTACAGACTTCAAATC+TGG | + | chr1_2:68342161-68342180 | None:intergenic | 40.0% | |
| !!! | GTAGACGATTTTGAAGTTGG+GGG | - | chr1_2:68342173-68342192 | Msa0087390:intron | 40.0% |
| ! | GGCAATTGATAGCAGAATTG+AGG | - | chr1_2:68342836-68342855 | Msa0087390:intron | 40.0% |
| TAACTTGACGTGTTCTTGAC+AGG | - | chr1_2:68343232-68343251 | Msa0087390:intron | 40.0% | |
| AGGTACAAAGGGAATGATGA+TGG | - | chr1_2:68343432-68343451 | Msa0087390:intron | 40.0% | |
| !! | GATGGTACTGATCAAGTTAG+TGG | - | chr1_2:68343450-68343469 | Msa0087390:intron | 40.0% |
| CAATCTGAACCAAAGGTTAG+TGG | - | chr1_2:68343498-68343517 | Msa0087390:intron | 40.0% | |
| CACTAAACACCACTAACCTT+TGG | + | chr1_2:68343510-68343529 | None:intergenic | 40.0% | |
| CAAAGGTTAGTGGTGTTTAG+TGG | - | chr1_2:68343508-68343527 | Msa0087390:intron | 40.0% | |
| ! | AGGCTTCTGAAGATGCTAAA+AGG | - | chr1_2:68343600-68343619 | Msa0087390:intron | 40.0% |
| TACACAAGCTTCTAAACCAC+AGG | - | chr1_2:68343721-68343740 | Msa0087390:intron | 40.0% | |
| ! | AAAGAGCATGGTAAAACCTG+TGG | + | chr1_2:68343740-68343759 | None:intergenic | 40.0% |
| ! | GTTTTCTTACTGTCAGGATG+TGG | - | chr1_2:68343944-68343963 | Msa0087390:intron | 40.0% |
| ! | TTTTAACAGAAGCCTGACCA+TGG | + | chr1_2:68344409-68344428 | None:intergenic | 40.0% |
| !! | TCTCTGGAATGTAAGATTGG+AGG | - | chr1_2:68344520-68344539 | Msa0087390:intron | 40.0% |
| AATGTAAGATTGGAGGTGAG+TGG | - | chr1_2:68344527-68344546 | Msa0087390:intron | 40.0% | |
| ATGTAAGATTGGAGGTGAGT+GGG | - | chr1_2:68344528-68344547 | Msa0087390:intron | 40.0% | |
| AGATACTATCCATCATCGCA+TGG | + | chr1_2:68344658-68344677 | None:intergenic | 40.0% | |
| AGAGCAAGACAAAACCTTTC+CGG | + | chr1_2:68344721-68344740 | None:intergenic | 40.0% | |
| !! | GCAGTTGCAGTTTGATTTGA+AGG | - | chr1_2:68344795-68344814 | Msa0087390:intron | 40.0% |
| ! | TAGAGGATGCAATGGTGTTT+TGG | + | chr1_2:68345047-68345066 | None:intergenic | 40.0% |
| GAATGGATCGTCTATAACTC+AGG | - | chr1_2:68345114-68345133 | Msa0087390:intron | 40.0% | |
| !! | GAGTGAATACTTGGTGTTTG+AGG | - | chr1_2:68345359-68345378 | Msa0087390:intron | 40.0% |
| ! | GTCCATGGCTGATTTAATTG+AGG | - | chr1_2:68345850-68345869 | Msa0087390:intron | 40.0% |
| GAATACACTCATCCTTCTTG+AGG | + | chr1_2:68345924-68345943 | None:intergenic | 40.0% | |
| GGAGAAGGCTTCAAAAGTAA+CGG | - | chr1_2:68345959-68345978 | Msa0087390:intron | 40.0% | |
| CAAGTCCGCCTCATTAATTA+AGG | + | chr1_2:68346005-68346024 | None:intergenic | 40.0% | |
| ! | AATTAATGAGGCGGACTTGA+AGG | - | chr1_2:68346006-68346025 | Msa0087390:intron | 40.0% |
| TTGAAGGAGAAATAGGGCAA+TGG | - | chr1_2:68346022-68346041 | Msa0087390:intron | 40.0% | |
| ATAGGGCAATGGAACAAAAC+AGG | - | chr1_2:68346033-68346052 | Msa0087390:intron | 40.0% | |
| CGGCAAAATGAATGGTTGAT+TGG | + | chr1_2:68346185-68346204 | None:intergenic | 40.0% | |
| ! | AAGGATAGCGGCAAAATGAA+TGG | + | chr1_2:68346193-68346212 | None:intergenic | 40.0% |
| CTGCATTGTGTAGGAGAATT+TGG | + | chr1_2:68346499-68346518 | None:intergenic | 40.0% | |
| ! | TCTTCTTTTTCCCCTTATGG+TGG | - | chr1_2:68346833-68346852 | Msa0087390:intron | 40.0% |
| ACAGTAGATGCGTTAAGAAC+AGG | - | chr1_2:68346907-68346926 | Msa0087390:five_prime_UTR | 40.0% | |
| AACAGGAGCAACTACTATGA+AGG | - | chr1_2:68346924-68346943 | Msa0087390:five_prime_UTR | 40.0% | |
| CAACTCGATCGTTAAAGACT+TGG | + | chr1_2:68346991-68347010 | None:intergenic | 40.0% | |
| CTGTTCATTTATCTCGTCCA+TGG | + | chr1_2:68347091-68347110 | None:intergenic | 40.0% | |
| AAATAAGCAGCTGCACCAAT+TGG | + | chr1_2:68347153-68347172 | None:intergenic | 40.0% | |
| TTCGTATATTAGCACTACCC+TGG | + | chr1_2:68347481-68347500 | None:intergenic | 40.0% | |
| !! | CTGAAATGTTGGTGCTACAT+TGG | - | chr1_2:68347535-68347554 | Msa0087390:five_prime_UTR | 40.0% |
| !! | GGTTTTAATGCATGTCCATG+TGG | - | chr1_2:68347556-68347575 | Msa0087390:five_prime_UTR | 40.0% |
| ! | TTGTTCTTTTCAGCACGAAC+TGG | - | chr1_2:68347592-68347611 | Msa0087390:intron | 40.0% |
| GGAAGCAGAACTTGAAGAAT+TGG | - | chr1_2:68347613-68347632 | Msa0087390:intron | 40.0% | |
| AGAATTGGAGAATGCTGAGT+TGG | - | chr1_2:68347628-68347647 | Msa0087390:intron | 40.0% | |
| AATTCATCTTCCTCAGGAGT+CGG | + | chr1_2:68347746-68347765 | None:intergenic | 40.0% | |
| ! | AGCTTAAGCCAGAATTTTGC+TGG | - | chr1_2:68347989-68348008 | Msa0087390:five_prime_UTR | 40.0% |
| ATGGAAGACACTTATCGTCA+CGG | + | chr1_2:68348024-68348043 | None:intergenic | 40.0% | |
| AGAAGAAAAGAAGCCGATGG+AGG | - | chr1_2:68340774-68340793 | Msa0087390:three_prime_UTR | 45.0% | |
| ATGAGGAAAATGGAGCTTGC+TGG | + | chr1_2:68340860-68340879 | None:intergenic | 45.0% | |
| GGGAATGCATTGTTCAAAGC+TGG | - | chr1_2:68341393-68341412 | Msa0087390:intron | 45.0% | |
| GATTATGGAGGATTAGGGCA+AGG | - | chr1_2:68341921-68341940 | Msa0087390:intron | 45.0% | |
| TGAAACCCGTATTTGGGTCA+GGG | - | chr1_2:68342021-68342040 | Msa0087390:intron | 45.0% | |
| AGAACTCACTCCCTGTAACT+TGG | - | chr1_2:68342060-68342079 | Msa0087390:intron | 45.0% | |
| GAAACTGGTACCAAAACGTC+CGG | + | chr1_2:68342126-68342145 | None:intergenic | 45.0% | |
| CACACAAGGGAGACATAGAA+AGG | + | chr1_2:68342973-68342992 | None:intergenic | 45.0% | |
| TGCTCTAGCACTCTCGATTT+CGG | + | chr1_2:68343657-68343676 | None:intergenic | 45.0% | |
| TCTTACTGTCAGGATGTGGA+TGG | - | chr1_2:68343948-68343967 | Msa0087390:intron | 45.0% | |
| ATTGCTGCATCAGCCAAGTA+AGG | - | chr1_2:68344007-68344026 | Msa0087390:intron | 45.0% | |
| GTGATCTCAGTTAGCTGATG+AGG | + | chr1_2:68344439-68344458 | None:intergenic | 45.0% | |
| TGTGCAAGTAGACAAGTCTC+TGG | - | chr1_2:68344504-68344523 | Msa0087390:intron | 45.0% | |
| TGTAAGATTGGAGGTGAGTG+GGG | - | chr1_2:68344529-68344548 | Msa0087390:intron | 45.0% | |
| GAATGCTTTGCAAAGCACAC+AGG | - | chr1_2:68344551-68344570 | Msa0087390:intron | 45.0% | |
| !! | TTCTTGCTGTTACTGAGGAG+AGG | - | chr1_2:68344596-68344615 | Msa0087390:intron | 45.0% |
| !! | TCTTGCTGTTACTGAGGAGA+GGG | - | chr1_2:68344597-68344616 | Msa0087390:intron | 45.0% |
| !! | GGATGCAATGGTGTTTTGGA+AGG | + | chr1_2:68345043-68345062 | None:intergenic | 45.0% |
| ACACCATTGCATCCTCTATC+TGG | - | chr1_2:68345049-68345068 | Msa0087390:intron | 45.0% | |
| CACCATTGCATCCTCTATCT+GGG | - | chr1_2:68345050-68345069 | Msa0087390:intron | 45.0% | |
| TACCCAGATAGAGGATGCAA+TGG | + | chr1_2:68345055-68345074 | None:intergenic | 45.0% | |
| !! | TGTATTGGCTACCCAGATAG+AGG | + | chr1_2:68345064-68345083 | None:intergenic | 45.0% |
| AACAGGCAGCTTCCAGATTT+GGG | + | chr1_2:68345771-68345790 | None:intergenic | 45.0% | |
| AAACAGGCAGCTTCCAGATT+TGG | + | chr1_2:68345772-68345791 | None:intergenic | 45.0% | |
| CGCCTCAATTAAATCAGCCA+TGG | + | chr1_2:68345855-68345874 | None:intergenic | 45.0% | |
| ! | TGGCTGATTTAATTGAGGCG+TGG | - | chr1_2:68345855-68345874 | Msa0087390:intron | 45.0% |
| TCTTGAGGAAACAAACTGCG+CGG | + | chr1_2:68345909-68345928 | None:intergenic | 45.0% | |
| ! | CGCAGTTTGTTTCCTCAAGA+AGG | - | chr1_2:68345909-68345928 | Msa0087390:intron | 45.0% |
| ACCAGATTAATGTGGGGAGA+AGG | - | chr1_2:68345944-68345963 | Msa0087390:intron | 45.0% | |
| GCGGACTTGAAGGAGAAATA+GGG | - | chr1_2:68346016-68346035 | Msa0087390:intron | 45.0% | |
| ATTAATAGGGCAGTCTCACC+TGG | + | chr1_2:68346601-68346620 | None:intergenic | 45.0% | |
| GACTGCCCTATTAATCAGAG+TGG | - | chr1_2:68346606-68346625 | Msa0087390:intron | 45.0% | |
| TGTACTTTCTGCTGCCAAGT+TGG | - | chr1_2:68346744-68346763 | Msa0087390:intron | 45.0% | |
| GTACTTTCTGCTGCCAAGTT+GGG | - | chr1_2:68346745-68346764 | Msa0087390:intron | 45.0% | |
| ! | TGCTGCCAAGTTGGGTATTA+AGG | - | chr1_2:68346753-68346772 | Msa0087390:intron | 45.0% |
| TAACGCATCTACTGTTTCCG+TGG | + | chr1_2:68346902-68346921 | None:intergenic | 45.0% | |
| ! | TGATGATGTCGACAAGACCA+TGG | - | chr1_2:68347071-68347090 | Msa0087390:intron | 45.0% |
| !! | GAAGCATTGTCAGCTCCAAT+TGG | - | chr1_2:68347135-68347154 | Msa0087390:intron | 45.0% |
| !!! | TGCAGCTGCTTATTTTGACG+AGG | - | chr1_2:68347158-68347177 | Msa0087390:intron | 45.0% |
| GACTCCTGAGGAAGATGAAT+TGG | - | chr1_2:68347745-68347764 | Msa0087390:intron | 45.0% | |
| ! | AAATCTGTCGGTTGTGTCAC+GGG | + | chr1_2:68347817-68347836 | None:intergenic | 45.0% |
| ! | CAAATCTGTCGGTTGTGTCA+CGG | + | chr1_2:68347818-68347837 | None:intergenic | 45.0% |
| !!! | CTATTTGGTTTTGCAACGGC+TGG | - | chr1_2:68347963-68347982 | Msa0087390:five_prime_UTR | 45.0% |
| !! | TTATAAATATCATATTATAA+CGG | + | chr1_2:68343215-68343234 | None:intergenic | 5.0% |
| AAGAAGCCGATGGAGGAAGA+AGG | - | chr1_2:68340781-68340800 | Msa0087390:three_prime_UTR | 50.0% | |
| AGAAGCCGATGGAGGAAGAA+GGG | - | chr1_2:68340782-68340801 | Msa0087390:three_prime_UTR | 50.0% | |
| GTGAAACCCGTATTTGGGTC+AGG | - | chr1_2:68342020-68342039 | Msa0087390:intron | 50.0% | |
| TTGAAGTTGGGGGCAGAAGT+AGG | - | chr1_2:68342183-68342202 | Msa0087390:intron | 50.0% | |
| ACTTTGAACGGGAACTCCTC+AGG | - | chr1_2:68342565-68342584 | Msa0087390:intron | 50.0% | |
| GAACTTCGGCAACATACCTG+AGG | + | chr1_2:68342584-68342603 | None:intergenic | 50.0% | |
| GCTGATAGCAGGCACCTTAA+TGG | + | chr1_2:68343277-68343296 | None:intergenic | 50.0% | |
| TGCTATCAGCAACGAGCTTG+CGG | - | chr1_2:68343287-68343306 | Msa0087390:intron | 50.0% | |
| !! | AATCGAGAGTGCTAGAGCAG+TGG | - | chr1_2:68343658-68343677 | Msa0087390:intron | 50.0% |
| ACTGGTGGAAGAGGTTCAAG+AGG | - | chr1_2:68343971-68343990 | Msa0087390:intron | 50.0% | |
| GTTCGTTGACCATGCGATGA+TGG | - | chr1_2:68344646-68344665 | Msa0087390:intron | 50.0% | |
| GCCTTCTCCCCACATTAATC+TGG | + | chr1_2:68345948-68345967 | None:intergenic | 50.0% | |
| ! | GGCGGACTTGAAGGAGAAAT+AGG | - | chr1_2:68346015-68346034 | Msa0087390:intron | 50.0% |
| !! | AGAAGGTGCTAAAGCCACCA+CGG | - | chr1_2:68346882-68346901 | Msa0087390:five_prime_UTR | 50.0% |
| GGAGCAGGAGCTGTAAATGT+TGG | + | chr1_2:68347671-68347690 | None:intergenic | 50.0% | |
| GCTGCCAATTCATCTTCCTC+AGG | + | chr1_2:68347752-68347771 | None:intergenic | 50.0% | |
| AGATGAATTGGCAGCTCTGC+AGG | - | chr1_2:68347757-68347776 | Msa0087390:intron | 50.0% | |
| GAACAAGAGAAGGGAGGGAG+AGG | - | chr1_2:68340748-68340767 | Msa0087390:three_prime_UTR | 55.0% | |
| CGCCCTAGAGGGAAGAAATG+AGG | + | chr1_2:68340877-68340896 | None:intergenic | 55.0% | |
| GAGAAAAGCTGCGCCCTAGA+GGG | + | chr1_2:68340888-68340907 | None:intergenic | 55.0% | |
| AGAGAAAAGCTGCGCCCTAG+AGG | + | chr1_2:68340889-68340908 | None:intergenic | 55.0% | |
| TGGCGCTCACCAAGTGTTTG+AGG | - | chr1_2:68341551-68341570 | Msa0087390:intron | 55.0% | |
| GATTAGGGCAAGGGCAGAAG+TGG | - | chr1_2:68341931-68341950 | Msa0087390:intron | 55.0% | |
| TGGAGCCCTGACCCAAATAC+GGG | + | chr1_2:68342029-68342048 | None:intergenic | 55.0% | |
| GTGGAGCCCTGACCCAAATA+CGG | + | chr1_2:68342030-68342049 | None:intergenic | 55.0% | |
| CAGAATTTGAGGGAGGGGAG+TGG | - | chr1_2:68343086-68343105 | Msa0087390:intron | 55.0% | |
| GCAAGCTCGTTGCTGATAGC+AGG | + | chr1_2:68343288-68343307 | None:intergenic | 55.0% | |
| AGTGCTAGAGCAGTGGTGCT+GGG | - | chr1_2:68343665-68343684 | Msa0087390:intron | 55.0% | |
| ! | AGAGCAGTGGTGCTGGGAAT+TGG | - | chr1_2:68343671-68343690 | Msa0087390:intron | 55.0% |
| ! | GAGCAGTGGTGCTGGGAATT+GGG | - | chr1_2:68343672-68343691 | Msa0087390:intron | 55.0% |
| ! | AGCAGTGGTGCTGGGAATTG+GGG | - | chr1_2:68343673-68343692 | Msa0087390:intron | 55.0% |
| CTGTCAGGATGTGGATGGAC+TGG | - | chr1_2:68343953-68343972 | Msa0087390:intron | 55.0% | |
| !! | TCAGGATGTGGATGGACTGG+TGG | - | chr1_2:68343956-68343975 | Msa0087390:intron | 55.0% |
| !! | TGTGGATGGACTGGTGGAAG+AGG | - | chr1_2:68343962-68343981 | Msa0087390:intron | 55.0% |
| TTTCAACGCAGCTCCTGCCA+TGG | - | chr1_2:68344389-68344408 | Msa0087390:five_prime_UTR | 55.0% | |
| AACAGAAGCCTGACCATGGC+AGG | + | chr1_2:68344405-68344424 | None:intergenic | 55.0% | |
| GAGGAAACAAACTGCGCGGA+CGG | + | chr1_2:68345905-68345924 | None:intergenic | 55.0% | |
| CGCATCTACTGTTTCCGTGG+TGG | + | chr1_2:68346899-68346918 | None:intergenic | 55.0% | |
| CCAGCTGAGACATGCACTGT+GGG | + | chr1_2:68347692-68347711 | None:intergenic | 55.0% | |
| CCACAGTGCATGTCTCAGCT+GGG | - | chr1_2:68347690-68347709 | Msa0087390:intron | 55.0% | |
| TTTGCAGGAACAGGACGTGC+AGG | + | chr1_2:68347722-68347741 | None:intergenic | 55.0% | |
| GGCTGAGATGGCACTTTGAG+CGG | - | chr1_2:68347778-68347797 | Msa0087390:intron | 55.0% | |
| GCTGAGATGGCACTTTGAGC+GGG | - | chr1_2:68347779-68347798 | Msa0087390:intron | 55.0% | |
| GAGTGCTAGAGCAGTGGTGC+TGG | - | chr1_2:68343664-68343683 | Msa0087390:intron | 60.0% | |
| ! | AGTGGTGCTGGGAATTGGGG+AGG | - | chr1_2:68343676-68343695 | Msa0087390:intron | 60.0% |
| GAGACATGCACTGTGGGAGC+AGG | + | chr1_2:68347686-68347705 | None:intergenic | 60.0% | |
| CCCACAGTGCATGTCTCAGC+TGG | - | chr1_2:68347689-68347708 | Msa0087390:intron | 60.0% | |
| CCCAGCTGAGACATGCACTG+TGG | + | chr1_2:68347693-68347712 | None:intergenic | 60.0% | |
| CAGTGCATGTCTCAGCTGGG+AGG | - | chr1_2:68347693-68347712 | Msa0087390:intron | 60.0% | |
| ! | GGAGTCGGCTTTGCAGGAAC+AGG | + | chr1_2:68347731-68347750 | None:intergenic | 60.0% |
| ! | TCCTGCAAAGCCGACTCCTG+AGG | - | chr1_2:68347733-68347752 | Msa0087390:intron | 60.0% |
| ! | TCCTCAGGAGTCGGCTTTGC+AGG | + | chr1_2:68347737-68347756 | None:intergenic | 60.0% |
| ACGCAGCTCCTGCCATGGTC+AGG | - | chr1_2:68344394-68344413 | Msa0087390:five_prime_UTR | 65.0% | |
| GGCAGCTCTGCAGGCTGAGA+TGG | - | chr1_2:68347766-68347785 | Msa0087390:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 68340718 | 68348181 | 68340718 | ID=Msa0087390;Name=Msa0087390 |
| chr1_2 | mRNA | 68340718 | 68348181 | 68340718 | ID=Msa0087390-mRNA-1;Parent=Msa0087390;Name=Msa0087390-mRNA-1;_AED=0.24;_eAED=0.24;_QI=1468|1|1|1|0.30|0.5|14|385|144 |
| chr1_2 | exon | 68340718 | 68341294 | 68340718 | ID=Msa0087390-mRNA-1:exon:23328;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68341720 | 68341834 | 68341720 | ID=Msa0087390-mRNA-1:exon:23327;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68341937 | 68342028 | 68341937 | ID=Msa0087390-mRNA-1:exon:23326;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68343764 | 68343922 | 68343764 | ID=Msa0087390-mRNA-1:exon:23325;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68344327 | 68344499 | 68344327 | ID=Msa0087390-mRNA-1:exon:23324;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68344871 | 68344939 | 68344871 | ID=Msa0087390-mRNA-1:exon:23323;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68345157 | 68345297 | 68345157 | ID=Msa0087390-mRNA-1:exon:23322;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68345387 | 68345474 | 68345387 | ID=Msa0087390-mRNA-1:exon:23321;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68345618 | 68345645 | 68345618 | ID=Msa0087390-mRNA-1:exon:23320;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68345748 | 68345842 | 68345748 | ID=Msa0087390-mRNA-1:exon:23319;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68346628 | 68346757 | 68346628 | ID=Msa0087390-mRNA-1:exon:23318;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68346843 | 68347024 | 68346843 | ID=Msa0087390-mRNA-1:exon:23317;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68347485 | 68347606 | 68347485 | ID=Msa0087390-mRNA-1:exon:23316;Parent=Msa0087390-mRNA-1 |
| chr1_2 | exon | 68347865 | 68348181 | 68347865 | ID=Msa0087390-mRNA-1:exon:23315;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68347865 | 68348181 | 68347865 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68347485 | 68347606 | 68347485 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68346843 | 68347024 | 68346843 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68346628 | 68346757 | 68346628 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68345748 | 68345842 | 68345748 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68345618 | 68345645 | 68345618 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68345387 | 68345474 | 68345387 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68345157 | 68345297 | 68345157 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68344871 | 68344939 | 68344871 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68344327 | 68344499 | 68344327 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | five_prime_UTR | 68343800 | 68343922 | 68343800 | ID=Msa0087390-mRNA-1:five_prime_utr;Parent=Msa0087390-mRNA-1 |
| chr1_2 | CDS | 68343764 | 68343799 | 68343764 | ID=Msa0087390-mRNA-1:cds;Parent=Msa0087390-mRNA-1 |
| chr1_2 | CDS | 68341937 | 68342028 | 68341937 | ID=Msa0087390-mRNA-1:cds;Parent=Msa0087390-mRNA-1 |
| chr1_2 | CDS | 68341720 | 68341834 | 68341720 | ID=Msa0087390-mRNA-1:cds;Parent=Msa0087390-mRNA-1 |
| chr1_2 | CDS | 68341103 | 68341294 | 68341103 | ID=Msa0087390-mRNA-1:cds;Parent=Msa0087390-mRNA-1 |
| chr1_2 | three_prime_UTR | 68340718 | 68341102 | 68340718 | ID=Msa0087390-mRNA-1:three_prime_utr;Parent=Msa0087390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
