AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0895120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0895120 MtrunA17_Chr3g0120721 87.273 55 7 0 70 124 77 131 3.16e-25 98.2
Msa0895120 MtrunA17_Chr6g0449481 59.649 57 23 0 70 126 104 160 1.68e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0895120 AT3G13224.1 61.429 70 21 3 70 137 78 143 9.15e-19 79.3
Msa0895120 AT3G13224.3 61.429 70 21 3 70 137 69 134 3.50e-18 79.3
Msa0895120 AT3G13224.2 61.429 70 21 3 70 137 78 143 3.95e-18 79.3
Msa0895120 AT5G40490.2 58.621 58 24 0 70 127 84 141 8.67e-17 75.9
Msa0895120 AT5G40490.1 58.621 58 24 0 70 127 101 158 2.23e-16 74.7
Msa0895120 AT1G17640.2 51.724 58 25 1 70 124 125 182 3.68e-12 62.8
Msa0895120 AT1G17640.1 51.724 58 25 1 70 124 125 182 3.68e-12 62.8
Msa0895120 AT1G17640.3 51.724 58 25 1 70 124 125 182 3.68e-12 62.8

Find 119 sgRNAs with CRISPR-Local

Find 662 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACATATTTATCCTTTAT+TGG 0.115318 6_1:-81874264 Msa0895120:three_prime_UTR
GCTCTTTGTTCTTATATATT+TGG 0.123415 6_1:-81874453 Msa0895120:three_prime_UTR
TAATGCAGTTGTTGATTATT+AGG 0.128581 6_1:-81874703 Msa0895120:three_prime_UTR
TCTTAAGCGTGAAGTGTTTA+AGG 0.168191 6_1:-81881262 Msa0895120:CDS
CACTTCATCTTATGATAATA+AGG 0.194458 6_1:-81872639 Msa0895120:three_prime_UTR
CTCTTTGTTCTTATATATTT+GGG 0.194873 6_1:-81874452 Msa0895120:three_prime_UTR
AAGAACTTCTTCTCAAAGTA+TGG 0.233679 6_1:-81875170 Msa0895120:CDS
CTTATCTCATCACTGTCTTT+TGG 0.234136 6_1:+81872772 None:intergenic
TCACAAGAAGGTGGATTAAA+TGG 0.236239 6_1:-81872742 Msa0895120:three_prime_UTR
AAATATAGTAGTATTTAATT+TGG 0.239175 6_1:-81870902 Msa0895120:three_prime_UTR
AGTGATGCTCTAATTGAATA+AGG 0.252736 6_1:+81872715 None:intergenic
AACTTCATGAAATGATAATA+TGG 0.255270 6_1:-81870869 Msa0895120:three_prime_UTR
AGGTGTTCGGCAGCTTGTTT+TGG 0.266085 6_1:+81875143 None:intergenic
TAAGGCGAAACCGGCGTTAT+TGG 0.276097 6_1:-81881244 Msa0895120:CDS
AAGAAAAGGGTGAGAGAAAC+GGG 0.276838 6_1:-81881882 Msa0895120:five_prime_UTR
AATGCAGTTGTTGATTATTA+GGG 0.282860 6_1:-81874702 Msa0895120:three_prime_UTR
TTGTTCTCATTTCTAATTAC+AGG 0.294038 6_1:+81875119 None:intergenic
GTCAAAATTCATGCCAATAA+AGG 0.301401 6_1:+81874251 None:intergenic
TCTAATCGGGCATAAGAATT+TGG 0.305782 6_1:-81874361 Msa0895120:three_prime_UTR
AAAATAGGCAAACTTGAATT+AGG 0.308920 6_1:+81870941 None:intergenic
GTGAGAGAAACGGGAGAAGA+AGG 0.328058 6_1:-81881873 Msa0895120:five_prime_UTR
TATTTCTCTCATCGTCATTA+TGG 0.332643 6_1:+81875906 None:intergenic
ATTACATGAGGTACCTTCAT+TGG 0.338544 6_1:-81874559 Msa0895120:three_prime_UTR
GGTTATTCTTTCATTGAAAT+CGG 0.343604 6_1:+81873358 None:intergenic
CTTCACGCTTAAGAAGCTTC+TGG 0.361296 6_1:+81881271 None:intergenic
TGCTGAAGCAAAGAGTAATT+AGG 0.363146 6_1:-81874949 Msa0895120:three_prime_UTR
AGAAAATGCTTATGTAGTTA+TGG 0.364690 6_1:-81874310 Msa0895120:three_prime_UTR
AAGACTCCATGGTTTCTAAC+AGG 0.367139 6_1:-81880853 Msa0895120:intron
AAAACGAACAACACGTTCTC+TGG 0.368321 6_1:+81872493 None:intergenic
TGTAATAACTTCAGCTAGTA+AGG 0.369694 6_1:+81872848 None:intergenic
AAGGGCAGAGATTGCAACTT+TGG 0.372459 6_1:-81872620 Msa0895120:three_prime_UTR
CTCCGGTTGCTCTATTTCTC+AGG 0.376825 6_1:-81881802 Msa0895120:intron
TAATCAATGAAAATTGCATT+AGG 0.381591 6_1:-81874770 Msa0895120:three_prime_UTR
TGAGAGAAACGGGAGAAGAA+GGG 0.384248 6_1:-81881872 Msa0895120:five_prime_UTR
AAAGAAAAGGGTGAGAGAAA+CGG 0.402108 6_1:-81881883 None:intergenic
TTAAGAGTGATTACCACTAT+AGG 0.420417 6_1:+81874156 None:intergenic
ATGAGAGTAAATAAATATAT+AGG 0.421079 6_1:-81874851 Msa0895120:three_prime_UTR
AGGGCAGAGATTGCAACTTT+GGG 0.424505 6_1:-81872619 Msa0895120:three_prime_UTR
AACGCGAACGGGAACGGAAA+GGG 0.425242 6_1:-81881847 Msa0895120:five_prime_UTR
ACCCTTTGTAATAGTCCTCT+TGG 0.426530 6_1:+81875448 None:intergenic
TGAGGACTGCAGCTGCATTA+TGG 0.428123 6_1:-81870982 Msa0895120:three_prime_UTR
GAAAATGCTTATGTAGTTAT+GGG 0.431315 6_1:-81874309 Msa0895120:three_prime_UTR
GACAACAACAATTGCTATAG+AGG 0.436984 6_1:-81874415 Msa0895120:three_prime_UTR
CATAGTTTAATGTGTCTTGA+AGG 0.440412 6_1:-81872591 Msa0895120:three_prime_UTR
ATCAACAGTTCTGTCACTAA+TGG 0.442237 6_1:+81874181 None:intergenic
AAGATATTGAGAGCTCTAAT+CGG 0.445132 6_1:-81874375 Msa0895120:three_prime_UTR
TCATTATGGAGTGAACTTGC+TGG 0.457097 6_1:+81875920 None:intergenic
TTTCAGGCTTTGGCAGATGA+TGG 0.458855 6_1:-81871151 Msa0895120:intron
GTGATGCTCTAATTGAATAA+GGG 0.459428 6_1:+81872716 None:intergenic
AACCTGAGAAATAGAGCAAC+CGG 0.465083 6_1:+81881800 None:intergenic
AAACCTTCAGATACAGTTGC+TGG 0.469643 6_1:+81875374 None:intergenic
GAGAGAAACGGGAGAAGAAG+GGG 0.475313 6_1:-81881871 Msa0895120:five_prime_UTR
TGTTGATGGTCGAGATAGAA+AGG 0.475552 6_1:-81875872 Msa0895120:intron
TGAAGTGTTTAAGGCGAAAC+CGG 0.479324 6_1:-81881253 Msa0895120:CDS
TCTAATTACAGGAAGGTGTT+CGG 0.480701 6_1:+81875130 None:intergenic
AACCAAGAGGACTATTACAA+AGG 0.488658 6_1:-81875450 Msa0895120:CDS
ACTTCATCTTATGATAATAA+GGG 0.489015 6_1:-81872638 Msa0895120:three_prime_UTR
ACGGAAACAGCTCTGATAGT+TGG 0.491511 6_1:+81872529 None:intergenic
TTAAGAAGCTTCTGGAACTT+CGG 0.499408 6_1:+81881279 None:intergenic
CTTATATCAGACAATAAACC+TGG 0.503922 6_1:+81872676 None:intergenic
ATAGCGCGTGGAGTTGTTGA+TGG 0.504153 6_1:-81875886 Msa0895120:CDS
AAATATTCAAAGTGAAGGGA+GGG 0.506185 6_1:-81875026 Msa0895120:three_prime_UTR
ACCAAGAGGACTATTACAAA+GGG 0.508916 6_1:-81875449 Msa0895120:CDS
GAACGCGAACGGGAACGGAA+AGG 0.515756 6_1:-81881848 Msa0895120:five_prime_UTR
AATTGCATTAGGTGCAGCTA+AGG 0.518819 6_1:-81874759 Msa0895120:three_prime_UTR
TATATCAAGCATGAGGGAAG+TGG 0.521879 6_1:+81871110 None:intergenic
AGAACTTCTTCTCAAAGTAT+GGG 0.527076 6_1:-81875169 Msa0895120:CDS
AGATATTGAGAGCTCTAATC+GGG 0.529013 6_1:-81874374 Msa0895120:three_prime_UTR
AGAGACGATGGTGTTGATGC+AGG 0.529064 6_1:+81881642 None:intergenic
CTCTGGAAGAAGGTAACAAA+CGG 0.530633 6_1:+81872510 None:intergenic
TGATGTTGATTATCTAGAGT+TGG 0.530885 6_1:-81874824 Msa0895120:three_prime_UTR
CTGGACATGAGCTATGGCTA+TGG 0.534932 6_1:+81881618 None:intergenic
GGTTAAGTGTGTGAAGACTC+TGG 0.535656 6_1:-81874218 Msa0895120:three_prime_UTR
CTATGTTGTGAATACAAACC+AGG 0.536689 6_1:-81872694 Msa0895120:three_prime_UTR
TAAAGAGCTTGCAAATATGC+AGG 0.538896 6_1:-81874800 Msa0895120:three_prime_UTR
ATAGTTTAATGTGTCTTGAA+GGG 0.538910 6_1:-81872590 Msa0895120:three_prime_UTR
TGCTCCACTTGAAGACTCCA+TGG 0.538936 6_1:-81880864 Msa0895120:CDS
GAACTGTTGATATCCTATAG+TGG 0.540081 6_1:-81874169 Msa0895120:intron
AGAAATAGAGCAACCGGAGT+CGG 0.547780 6_1:+81881806 None:intergenic
CTAACTATTGAAAGCAATGT+GGG 0.548108 6_1:-81874876 Msa0895120:three_prime_UTR
ATAGGCAAACTTGAATTAGG+TGG 0.553646 6_1:+81870944 None:intergenic
AATGAAAACAAATCCAATGA+AGG 0.553651 6_1:+81874546 None:intergenic
GAGACGATGGTGTTGATGCA+GGG 0.553931 6_1:+81881643 None:intergenic
AAATGCAGCACAAGCAAGTG+AGG 0.563147 6_1:-81872805 Msa0895120:three_prime_UTR
AAAATATTCAAAGTGAAGGG+AGG 0.563975 6_1:-81875027 Msa0895120:three_prime_UTR
AAATACCTGGACATGAGCTA+TGG 0.566461 6_1:+81881612 None:intergenic
CATAGCCATAGCTCATGTCC+AGG 0.566882 6_1:-81881617 Msa0895120:intron
AAGCTACCTGTTAGAAACCA+TGG 0.567245 6_1:+81880847 None:intergenic
TCACATCATCAATGACAAGA+AGG 0.569815 6_1:-81875592 Msa0895120:intron
TGTGGATAGATATGCGGTTG+TGG 0.570478 6_1:-81874595 Msa0895120:three_prime_UTR
AATATTCAAAGTGAAGGGAG+GGG 0.573065 6_1:-81875025 Msa0895120:three_prime_UTR
CTTATCAACGCCAATAACGC+CGG 0.573951 6_1:+81881234 None:intergenic
ACAACACGTTCTCTGGAAGA+AGG 0.576475 6_1:+81872500 None:intergenic
ATTCCAGCAACTGTATCTGA+AGG 0.581606 6_1:-81875377 Msa0895120:intron
TGGACATGAGCTATGGCTAT+GGG 0.583402 6_1:+81881619 None:intergenic
CTATCTATATATCAAGCATG+AGG 0.584937 6_1:+81871103 None:intergenic
AACAGTTCTGTCACTAATGG+AGG 0.594015 6_1:+81874184 None:intergenic
TCTCATTTCTAATTACAGGA+AGG 0.596659 6_1:+81875123 None:intergenic
GCTAACTATTGAAAGCAATG+TGG 0.614830 6_1:-81874877 Msa0895120:three_prime_UTR
GCGAACGGGAACGGAAAGGG+AGG 0.615429 6_1:-81881844 Msa0895120:five_prime_UTR
TATCTATATATCAAGCATGA+GGG 0.619581 6_1:+81871104 None:intergenic
ATGCTTATGTAGTTATGGGA+CGG 0.619882 6_1:-81874305 Msa0895120:three_prime_UTR
AATGAGAACAAGTCGACATG+AGG 0.619913 6_1:-81875107 Msa0895120:exon
AGAGAAACGGGAGAAGAAGG+GGG 0.620332 6_1:-81881870 Msa0895120:five_prime_UTR
GGGTCTAATATGACATTGCG+TGG 0.621343 6_1:-81873435 Msa0895120:three_prime_UTR
ATAAGAGTTGAATCACAAGA+AGG 0.621854 6_1:-81872754 Msa0895120:three_prime_UTR
AGAGTTGAATCACAAGAAGG+TGG 0.624818 6_1:-81872751 Msa0895120:three_prime_UTR
TATGGCTATGGGAGAGACGA+TGG 0.629432 6_1:+81881630 None:intergenic
TTATGTAGTTATGGGACGGA+GGG 0.638184 6_1:-81874301 Msa0895120:three_prime_UTR
GAACTTCTTCTCAAAGTATG+GGG 0.639196 6_1:-81875168 Msa0895120:CDS
GAAACCATGGAGTCTTCAAG+TGG 0.642401 6_1:+81880860 None:intergenic
AATGCAGCACAAGCAAGTGA+GGG 0.652805 6_1:-81872804 Msa0895120:three_prime_UTR
CTTATGTAGTTATGGGACGG+AGG 0.654649 6_1:-81874302 Msa0895120:three_prime_UTR
GTTGGAATACAATGAAACTG+AGG 0.656059 6_1:+81872547 None:intergenic
CATATCAGGTTGAAACCAAG+AGG 0.664183 6_1:-81875463 Msa0895120:intron
TAATGATCAATGTTCGTCGA+TGG 0.667610 6_1:-81874501 Msa0895120:three_prime_UTR
ACGATGAGAGAAATAGCGCG+TGG 0.694923 6_1:-81875898 Msa0895120:CDS
TGAAATTGTGGATAGATATG+CGG 0.698305 6_1:-81874601 Msa0895120:three_prime_UTR
TGTTAAGGTTAAGACACATG+AGG 0.705218 6_1:-81871000 Msa0895120:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTATTTTTTTAAT+AGG - chr6_1:81872283-81872302 Msa0895120:intron 0.0%
!!! TATTTTTTATTTTTTTAATA+GGG - chr6_1:81872284-81872303 Msa0895120:intron 0.0%
!!! ATATTTTTTTATTAAAAAAT+AGG + chr6_1:81875622-81875641 None:intergenic 0.0%
!!! ATATTTTTTTATTAAAAAAT+AGG - chr6_1:81875622-81875641 Msa0895120:intron 0.0%
!!! TATTTTTATTTTTTTTAATA+GGG + chr6_1:81875661-81875680 None:intergenic 0.0%
!!! TTATTTTTATTTTTTTTAAT+AGG + chr6_1:81875662-81875681 None:intergenic 0.0%
!!! TTATTTTTACAGAATTTTTT+TGG - chr6_1:81871146-81871165 Msa0895120:three_prime_UTR 10.0%
!!! TATTTTTACAGAATTTTTTT+GGG - chr6_1:81871147-81871166 Msa0895120:three_prime_UTR 10.0%
!! AAAAAAATGAAAAAAAATTC+TGG - chr6_1:81872455-81872474 Msa0895120:intron 10.0%
!!! CGAAATTTTTTTAAAAAAAT+TGG - chr6_1:81872496-81872515 Msa0895120:three_prime_UTR 10.0%
!! TAAAAATAAAAAGTAAAATC+TGG - chr6_1:81872558-81872577 Msa0895120:three_prime_UTR 10.0%
!! TTAAAAAAATGATAACATTA+TGG - chr6_1:81872586-81872605 Msa0895120:three_prime_UTR 10.0%
!! AAAATAATAGAATAAAAATG+GGG + chr6_1:81873112-81873131 None:intergenic 10.0%
!!! TTTTATTCTATTATTTTTAG+TGG - chr6_1:81873115-81873134 Msa0895120:intron 10.0%
!! GTATATTATTTAAATGAATA+TGG - chr6_1:81873191-81873210 Msa0895120:intron 10.0%
!!! AATATTAATATTTTGGTTAA+TGG - chr6_1:81873259-81873278 Msa0895120:intron 10.0%
!!! ATATTAATATTTTGGTTAAT+GGG - chr6_1:81873260-81873279 Msa0895120:intron 10.0%
!!! AAAAAAATCATATTTCTTTT+CGG + chr6_1:81875334-81875353 None:intergenic 10.0%
!! TTAAAAAAATGAAAACATTA+TGG + chr6_1:81875419-81875438 None:intergenic 10.0%
!! TAAAAATAAAAAGTAAAATC+TGG + chr6_1:81872558-81872577 None:intergenic 10.0%
!!! CGAATTTTTTTTAAAAAAAT+TGG + chr6_1:81875509-81875528 None:intergenic 10.0%
!! TATAATGAATTAATAGTTTA+AGG - chr6_1:81876040-81876059 Msa0895120:intron 10.0%
!! ATAATGAATTAATAGTTTAA+GGG - chr6_1:81876041-81876060 Msa0895120:intron 10.0%
!!! ATATTTTTTATCTAAATTTC+TGG - chr6_1:81876102-81876121 Msa0895120:intron 10.0%
!!! TTATATGAAAATTTTGAAAT+TGG - chr6_1:81876449-81876468 Msa0895120:intron 10.0%
!! AAATCATAATAACATAAAAA+GGG + chr6_1:81878634-81878653 None:intergenic 10.0%
!!! AAGTTTTTTTTAACATTAAA+AGG - chr6_1:81881186-81881205 Msa0895120:intron 10.0%
!!! AGTTTTTTTTAACATTAAAA+GGG - chr6_1:81881187-81881206 Msa0895120:intron 10.0%
!! AAATATAGTAGTATTTAATT+TGG - chr6_1:81881835-81881854 Msa0895120:five_prime_UTR 10.0%
!!! TTTATGATAGACAAAATTTT+TGG - chr6_1:81871211-81871230 Msa0895120:intron 15.0%
!!! AGTTTCTTTTATTTTAATTG+AGG - chr6_1:81871284-81871303 Msa0895120:intron 15.0%
!!! GTTTCTTTTATTTTAATTGA+GGG - chr6_1:81871285-81871304 Msa0895120:intron 15.0%
!! AACAAATCATAAATAACAAA+TGG + chr6_1:81871729-81871748 None:intergenic 15.0%
!!! TAGATTTTTGTTTAAGATAT+TGG - chr6_1:81871932-81871951 Msa0895120:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG - chr6_1:81872528-81872547 Msa0895120:three_prime_UTR 15.0%
!!! TGATTTTTTTTTCATTTTTC+CGG + chr6_1:81875344-81875363 None:intergenic 15.0%
!!! TTTTTCAAAAATTTCAAGAT+TGG + chr6_1:81872820-81872839 None:intergenic 15.0%
!! TTATTATTTGTGGAAATATT+AGG - chr6_1:81873216-81873235 Msa0895120:intron 15.0%
!! ATATTAGGAGAAATAAAAAT+AGG - chr6_1:81873231-81873250 Msa0895120:intron 15.0%
!!! GGAGTAAAATATTAATATTT+TGG - chr6_1:81873252-81873271 Msa0895120:intron 15.0%
!!! AAAGAAAGAAGTTATATTTT+TGG - chr6_1:81873324-81873343 Msa0895120:intron 15.0%
!!! AAGAAAGAAGTTATATTTTT+GGG - chr6_1:81873325-81873344 Msa0895120:intron 15.0%
!!! TAATTAAGTTAGCTTTAAAA+TGG - chr6_1:81873995-81874014 Msa0895120:intron 15.0%
!! ATGTATTTAAATAAACACAT+AGG + chr6_1:81874794-81874813 None:intergenic 15.0%
!!! AAAATAAAGTTGATTTATGT+TGG - chr6_1:81875087-81875106 Msa0895120:three_prime_UTR 15.0%
!!! AAATAAAGTTGATTTATGTT+GGG - chr6_1:81875088-81875107 Msa0895120:three_prime_UTR 15.0%
!! TTTATTAAGATTCTTTATGT+TGG - chr6_1:81875185-81875204 Msa0895120:intron 15.0%
!! AATAATTAATATTACGTTGT+TGG - chr6_1:81875287-81875306 Msa0895120:intron 15.0%
!! ATAATTAATATTACGTTGTT+GGG - chr6_1:81875288-81875307 Msa0895120:intron 15.0%
!!! TGATTTTTTTTTCATTTTTC+CGG - chr6_1:81875344-81875363 Msa0895120:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG + chr6_1:81872528-81872547 None:intergenic 15.0%
!! ACAAATATACATACAATAAA+GGG + chr6_1:81875877-81875896 None:intergenic 15.0%
!! AACAAATATACATACAATAA+AGG + chr6_1:81875878-81875897 None:intergenic 15.0%
!! TAATGAATTAATAGTTTAAG+GGG - chr6_1:81876042-81876061 Msa0895120:intron 15.0%
!!! ATTTGCATATTTTTTAAATG+AGG - chr6_1:81876070-81876089 Msa0895120:intron 15.0%
!! CAGAAAATTTATGATATAAA+TGG - chr6_1:81876338-81876357 Msa0895120:intron 15.0%
!! AAAAGGTAGATTTATATATA+TGG + chr6_1:81876674-81876693 None:intergenic 15.0%
!! TCAATACATCAAATTAAAAA+AGG + chr6_1:81876691-81876710 None:intergenic 15.0%
!!! ATTCAGTTTAATTTTTGATT+TGG - chr6_1:81877205-81877224 Msa0895120:intron 15.0%
!!! TTCAGTTTAATTTTTGATTT+GGG - chr6_1:81877206-81877225 Msa0895120:intron 15.0%
!! TTAAAAAATATTCAAAGTGA+AGG - chr6_1:81877706-81877725 Msa0895120:intron 15.0%
!! TAAAAAATATTCAAAGTGAA+GGG - chr6_1:81877707-81877726 Msa0895120:intron 15.0%
!! ATTACAAAAAACTAACTAAT+AGG + chr6_1:81877741-81877760 None:intergenic 15.0%
!!! TATTAGTTAGTTTTTTGTAA+TGG - chr6_1:81877740-81877759 Msa0895120:intron 15.0%
!! ATGAGAGTAAATAAATATAT+AGG - chr6_1:81877886-81877905 Msa0895120:intron 15.0%
!! CAAATCATAATAACATAAAA+AGG + chr6_1:81878635-81878654 None:intergenic 15.0%
!!! TTTTTTTTTTTTGAAGTATC+CGG + chr6_1:81878945-81878964 None:intergenic 15.0%
!! TCAAAAAAAAAAAAAGATAC+CGG - chr6_1:81878951-81878970 Msa0895120:intron 15.0%
!!! ACATTTTCCTAAATTATTAT+AGG + chr6_1:81879008-81879027 None:intergenic 15.0%
!!! TATTTTCTTTTGTAGATTAA+TGG - chr6_1:81879148-81879167 Msa0895120:intron 15.0%
!! TGAAATATTACAAAAATGTT+TGG - chr6_1:81879209-81879228 Msa0895120:intron 15.0%
!!! AATTTTCTTTTCTAAAAGAA+GGG - chr6_1:81879654-81879673 Msa0895120:intron 15.0%
!!! GGAATAGAATAATTTAATTT+TGG - chr6_1:81879675-81879694 Msa0895120:intron 15.0%
!!! TTATCTTTTTTAAATTCTGA+TGG - chr6_1:81880540-81880559 Msa0895120:intron 15.0%
!! TGTCTACTTAAAAAATATTA+TGG - chr6_1:81880808-81880827 Msa0895120:intron 15.0%
!!! GTTTTTTTTAACATTAAAAG+GGG - chr6_1:81881188-81881207 Msa0895120:intron 15.0%
!! AGAAATGTAAATATCAAATA+TGG + chr6_1:81881378-81881397 None:intergenic 15.0%
!!! ATATAATTTTAGAGAACTAT+TGG + chr6_1:81881439-81881458 None:intergenic 15.0%
!!! ATATTGAATTTTCTTTTTTC+AGG - chr6_1:81881570-81881589 Msa0895120:intron 15.0%
!!! TTGATATATAGATAGTTTTT+GGG - chr6_1:81881642-81881661 Msa0895120:five_prime_UTR 15.0%
!! CTAAAAATATTAAACTGTTA+AGG - chr6_1:81881722-81881741 Msa0895120:intron 15.0%
!!! TTTTGTTTATTTTGTTGAGT+TGG - chr6_1:81871047-81871066 Msa0895120:three_prime_UTR 20.0%
!! ATTCTGTAAAAATAAATACC+TGG + chr6_1:81871141-81871160 None:intergenic 20.0%
!!! TTGGATCATATCAAATTTTT+TGG - chr6_1:81871230-81871249 Msa0895120:intron 20.0%
!!! TAATTGAGGGTTTAATTTTT+TGG - chr6_1:81871298-81871317 Msa0895120:intron 20.0%
!!! GAACTTTTATATTTCATTTC+TGG + chr6_1:81871336-81871355 None:intergenic 20.0%
!! AATGGAAAAATTTCAGAAAA+TGG + chr6_1:81871358-81871377 None:intergenic 20.0%
!! TGTTAAATCCAAAAATCAAA+TGG + chr6_1:81871661-81871680 None:intergenic 20.0%
!!! AACAAAAATCTAAAATACCA+AGG + chr6_1:81871924-81871943 None:intergenic 20.0%
!! CAATAATTTATAGAGAAACA+TGG + chr6_1:81872029-81872048 None:intergenic 20.0%
!! CATGTTTCTCTATAAATTAT+TGG - chr6_1:81872027-81872046 Msa0895120:intron 20.0%
!! GGTATATAAATCATGTTATA+CGG + chr6_1:81873060-81873079 None:intergenic 20.0%
!! GTATAACATGATTTATATAC+CGG - chr6_1:81872714-81872733 Msa0895120:three_prime_UTR 20.0%
!!! ATACATTGTATCTTGTTATT+CGG - chr6_1:81872748-81872767 Msa0895120:three_prime_UTR 20.0%
!!! ATACATTGTATCTTGTTATT+CGG + chr6_1:81872748-81872767 None:intergenic 20.0%
!! GTATAACATGATTTATATAC+CGG + chr6_1:81872714-81872733 None:intergenic 20.0%
!! GGTATATAAATCATGTTATA+CGG - chr6_1:81873060-81873079 Msa0895120:intron 20.0%
!! TATATACCATGATTATTGAA+AGG + chr6_1:81873521-81873540 None:intergenic 20.0%
!!! AACATGTTTCTAAAACAATT+TGG - chr6_1:81873680-81873699 Msa0895120:intron 20.0%
!!! ACATGTTTCTAAAACAATTT+GGG - chr6_1:81873681-81873700 Msa0895120:intron 20.0%
!! ATGTTTATCATTCAAATTGT+TGG - chr6_1:81874468-81874487 Msa0895120:three_prime_UTR 20.0%
!! TGTTTATCATTCAAATTGTT+GGG - chr6_1:81874469-81874488 Msa0895120:three_prime_UTR 20.0%
!!! CTTTTATGTATCACATATTT+TGG - chr6_1:81875032-81875051 Msa0895120:three_prime_UTR 20.0%
!!! AATAAAGTTGATTTATGTTG+GGG - chr6_1:81875089-81875108 Msa0895120:three_prime_UTR 20.0%
!!! TTTTCATTGATGTTGAATTT+TGG - chr6_1:81875126-81875145 Msa0895120:CDS 20.0%
!! ATATAATGAGATCATTAGAT+AGG + chr6_1:81876007-81876026 None:intergenic 20.0%
!! AATGAATTAATAGTTTAAGG+GGG - chr6_1:81876043-81876062 Msa0895120:intron 20.0%
!!! CATAAATTTTCTGTATCATT+GGG + chr6_1:81876331-81876350 None:intergenic 20.0%
!!! TCATAAATTTTCTGTATCAT+TGG + chr6_1:81876332-81876351 None:intergenic 20.0%
!!! GAAAATTTTGAAATTGGTTT+TGG - chr6_1:81876455-81876474 Msa0895120:intron 20.0%
!! AAATAACACTCAATTAATGA+CGG + chr6_1:81876959-81876978 None:intergenic 20.0%
!!! GAGTGTTATTTACATTTTAT+AGG - chr6_1:81876968-81876987 Msa0895120:intron 20.0%
!!! AAAACTAAGAAGATTTTTGT+TGG - chr6_1:81877333-81877352 Msa0895120:intron 20.0%
!! TAATCAATGAAAATTGCATT+AGG - chr6_1:81877967-81877986 Msa0895120:intron 20.0%
!! CTCTTTGTTCTTATATATTT+GGG - chr6_1:81878285-81878304 Msa0895120:intron 20.0%
!! CAAACATATTTATCCTTTAT+TGG - chr6_1:81878473-81878492 Msa0895120:intron 20.0%
!! ACAAAAGAAAATATACACAA+GGG + chr6_1:81879141-81879160 None:intergenic 20.0%
!! TACAAAAGAAAATATACACA+AGG + chr6_1:81879142-81879161 None:intergenic 20.0%
!!! CAATTTTCTTTTCTAAAAGA+AGG - chr6_1:81879653-81879672 Msa0895120:intron 20.0%
!!! AGAATAATTTAATTTTGGAG+TGG - chr6_1:81879680-81879699 Msa0895120:intron 20.0%
!! ACTTCATCTTATGATAATAA+GGG - chr6_1:81880099-81880118 Msa0895120:intron 20.0%
!!! ATTTTTGATCCATACTATAA+TGG - chr6_1:81880679-81880698 Msa0895120:intron 20.0%
!! ATTTCTATTGTTCTATTCAT+AGG - chr6_1:81880980-81880999 Msa0895120:intron 20.0%
!! ATTTGAATGCAAGAAAAAAA+AGG - chr6_1:81881012-81881031 Msa0895120:intron 20.0%
!!! ACTATCAAATCATTTTTTTC+TGG + chr6_1:81881331-81881350 None:intergenic 20.0%
!! ATATTTACATTTCTACATCA+TGG - chr6_1:81881384-81881403 Msa0895120:intron 20.0%
!!! ATCAGTAGATCTTTTTTAAA+CGG - chr6_1:81881476-81881495 Msa0895120:intron 20.0%
!!! CTTGATATATAGATAGTTTT+TGG - chr6_1:81881641-81881660 Msa0895120:five_prime_UTR 20.0%
!!! TTTTTTATGACAAATAGTAG+AGG + chr6_1:81881697-81881716 None:intergenic 20.0%
!! AACTTCATGAAATGATAATA+TGG - chr6_1:81881868-81881887 Msa0895120:five_prime_UTR 20.0%
!!! TACAGAATTTTTTTGGGTTT+AGG - chr6_1:81871153-81871172 Msa0895120:intron 25.0%
!!! AGGGTTTAATTTTTTGGTTT+TGG - chr6_1:81871304-81871323 Msa0895120:intron 25.0%
!!! GGGTTTAATTTTTTGGTTTT+GGG - chr6_1:81871305-81871324 Msa0895120:intron 25.0%
! GAAGGAGGTAATAATAAAAA+TGG + chr6_1:81871376-81871395 None:intergenic 25.0%
!!! AGTTTTGAGTTGTTTATTGT+AGG - chr6_1:81872061-81872080 Msa0895120:intron 25.0%
!!! GTTTTGAGTTGTTTATTGTA+GGG - chr6_1:81872062-81872081 Msa0895120:intron 25.0%
!!! TCGAAAGAATCTTTTTTACA+GGG + chr6_1:81875803-81875822 None:intergenic 25.0%
!!! ATCGAAAGAATCTTTTTTAC+AGG + chr6_1:81875802-81875821 None:intergenic 25.0%
!!! TTTCCAGATTTTTTCAATAC+CGG - chr6_1:81872639-81872658 Msa0895120:three_prime_UTR 25.0%
!!! GAATATGGCTTTATTATTTG+TGG - chr6_1:81873206-81873225 Msa0895120:intron 25.0%
! TAGTAATTATGAGAGTTTAG+TGG - chr6_1:81873290-81873309 Msa0895120:intron 25.0%
! AGTAATTATGAGAGTTTAGT+GGG - chr6_1:81873291-81873310 Msa0895120:intron 25.0%
!!! ACAATAGAAAAACTGGTTTT+TGG - chr6_1:81873390-81873409 Msa0895120:three_prime_UTR 25.0%
!!! ATTGATGAATTTGTTGTTCT+TGG - chr6_1:81873549-81873568 Msa0895120:intron 25.0%
!!! ATTTGTTGTTCTTGGTTTTT+AGG - chr6_1:81873557-81873576 Msa0895120:intron 25.0%
!!! TTTGTTGTTCTTGGTTTTTA+GGG - chr6_1:81873558-81873577 Msa0895120:intron 25.0%
!!! TGTTTTAGAAACATGTTTAC+AGG + chr6_1:81873677-81873696 None:intergenic 25.0%
! TAAAACAATTTGGGTGATTA+TGG - chr6_1:81873690-81873709 Msa0895120:intron 25.0%
! AAAACAATTTGGGTGATTAT+GGG - chr6_1:81873691-81873710 Msa0895120:intron 25.0%
! TATGATAAAAATAGTCCAAG+TGG - chr6_1:81874056-81874075 Msa0895120:intron 25.0%
!!! ATATGTTTTTGGACTAACTT+GGG + chr6_1:81874120-81874139 None:intergenic 25.0%
!! TAACACTTAAGTTTGAAGTT+GGG + chr6_1:81874152-81874171 None:intergenic 25.0%
! AACTTCAAACTTAAGTGTTA+GGG - chr6_1:81874152-81874171 Msa0895120:intron 25.0%
!!! GCAATTAAGTTTTGATCAAT+AGG + chr6_1:81874215-81874234 None:intergenic 25.0%
!!! CAAAACTTAATTGCTTTTGA+AGG - chr6_1:81874221-81874240 Msa0895120:three_prime_UTR 25.0%
! TTTGAATGATAAACATTCCA+GGG + chr6_1:81874464-81874483 None:intergenic 25.0%
! ATTTGAATGATAAACATTCC+AGG + chr6_1:81874465-81874484 None:intergenic 25.0%
! GTTTATCATTCAAATTGTTG+GGG - chr6_1:81874470-81874489 Msa0895120:three_prime_UTR 25.0%
! TTTATCATTCAAATTGTTGG+GGG - chr6_1:81874471-81874490 Msa0895120:three_prime_UTR 25.0%
!! CATAATTATTTTCAGCAACA+AGG + chr6_1:81874765-81874784 None:intergenic 25.0%
! TTCAACATCAATGAAAATCT+TGG + chr6_1:81875123-81875142 None:intergenic 25.0%
!!! TTTCCAGATTTTTTCAATAC+CGG + chr6_1:81872639-81872658 None:intergenic 25.0%
!!! ATCGAAAGAATCTTTTTTAC+AGG - chr6_1:81875802-81875821 Msa0895120:intron 25.0%
!!! TCGAAAGAATCTTTTTTACA+GGG - chr6_1:81875803-81875822 Msa0895120:intron 25.0%
! CTACTATGCATAATCTTATT+TGG - chr6_1:81876192-81876211 Msa0895120:intron 25.0%
!!! TTTTGAAATTGGTTTTGGAT+TGG - chr6_1:81876460-81876479 Msa0895120:intron 25.0%
!!! TTTTTGGTCATTAGTGTTTT+TGG - chr6_1:81876570-81876589 Msa0895120:intron 25.0%
! ATGTACTGCATTTATTTGAA+AGG - chr6_1:81876621-81876640 Msa0895120:intron 25.0%
! TGTACTGCATTTATTTGAAA+GGG - chr6_1:81876622-81876641 Msa0895120:intron 25.0%
!!! TTTGCCGTTTTTTTTAGTTA+TGG - chr6_1:81876744-81876763 Msa0895120:intron 25.0%
! TGCTCCATAACTAAAAAAAA+CGG + chr6_1:81876751-81876770 None:intergenic 25.0%
!! ATTCGGGTTTATTACTTATA+CGG - chr6_1:81877088-81877107 Msa0895120:intron 25.0%
! TGTTATTGATCAAGTTATTC+AGG - chr6_1:81877118-81877137 Msa0895120:intron 25.0%
! AAGAAGGTAAAACTGTAATT+AGG - chr6_1:81877161-81877180 Msa0895120:intron 25.0%
! AGAAGGTAAAACTGTAATTA+GGG - chr6_1:81877162-81877181 Msa0895120:intron 25.0%
!!! TTGATTTGTTTGTTCATATC+AGG - chr6_1:81877260-81877279 Msa0895120:intron 25.0%
! GTTTGTATTGTATGATGATA+CGG - chr6_1:81877485-81877504 Msa0895120:intron 25.0%
! TTGTTCTCATTTCTAATTAC+AGG + chr6_1:81877621-81877640 None:intergenic 25.0%
!!! TAGTTAGTTTTTTGTAATGG+AGG - chr6_1:81877743-81877762 Msa0895120:intron 25.0%
!! TAATGCAGTTGTTGATTATT+AGG - chr6_1:81878034-81878053 Msa0895120:intron 25.0%
!! AATGCAGTTGTTGATTATTA+GGG - chr6_1:81878035-81878054 Msa0895120:intron 25.0%
! TTGGAAAAATCTTGAAATTG+TGG - chr6_1:81878124-81878143 Msa0895120:intron 25.0%
!!! ATTTTTCGATAGATTACATG+AGG - chr6_1:81878166-81878185 Msa0895120:intron 25.0%
! AATGAAAACAAATCCAATGA+AGG + chr6_1:81878194-81878213 None:intergenic 25.0%
! GCTCTTTGTTCTTATATATT+TGG - chr6_1:81878284-81878303 Msa0895120:intron 25.0%
! AGAAAATGCTTATGTAGTTA+TGG - chr6_1:81878427-81878446 Msa0895120:intron 25.0%
! GAAAATGCTTATGTAGTTAT+GGG - chr6_1:81878428-81878447 Msa0895120:intron 25.0%
!!! ATGAATTTTGACAATCGATT+TGG - chr6_1:81878497-81878516 Msa0895120:intron 25.0%
!!! TGAATTTTGACAATCGATTT+GGG - chr6_1:81878498-81878517 Msa0895120:intron 25.0%
! ATAACATAAAAAGGGTAACT+TGG + chr6_1:81878626-81878645 None:intergenic 25.0%
! AAATCTCATCTTTAGCAAAT+GGG + chr6_1:81878697-81878716 None:intergenic 25.0%
! AAAATCTCATCTTTAGCAAA+TGG + chr6_1:81878698-81878717 None:intergenic 25.0%
!! TAAAGATGAGATTTTTATGC+CGG - chr6_1:81878703-81878722 Msa0895120:intron 25.0%
! GTAGACACCTATAATAATTT+AGG - chr6_1:81878998-81879017 Msa0895120:intron 25.0%
! AAGAGAGTTACTAACAAAAA+TGG + chr6_1:81879275-81879294 None:intergenic 25.0%
!!! AGACTTCACTATTTTTCATT+TGG - chr6_1:81879343-81879362 Msa0895120:intron 25.0%
!!! GACTTCACTATTTTTCATTT+GGG - chr6_1:81879344-81879363 Msa0895120:intron 25.0%
! GGTTATTCTTTCATTGAAAT+CGG + chr6_1:81879382-81879401 None:intergenic 25.0%
! TGCACATTTATATATAGTCA+AGG + chr6_1:81879403-81879422 None:intergenic 25.0%
! AAAATGTAGTAAGTGTTTGT+TGG - chr6_1:81879483-81879502 Msa0895120:intron 25.0%
!! ATAGTGATTGTCCAAATTTT+GGG - chr6_1:81879534-81879553 Msa0895120:intron 25.0%
! CATATATGTATCCCAAAATT+TGG + chr6_1:81879548-81879567 None:intergenic 25.0%
!! TTTTTGTGTAATGTAGCTTT+TGG - chr6_1:81879612-81879631 Msa0895120:intron 25.0%
! TTTGTCCAACTAAGTTTAAA+AGG + chr6_1:81879865-81879884 None:intergenic 25.0%
! CACTTCATCTTATGATAATA+AGG - chr6_1:81880098-81880117 Msa0895120:intron 25.0%
! ATAGTTTAATGTGTCTTGAA+GGG - chr6_1:81880147-81880166 Msa0895120:intron 25.0%
! GATTAACTGTAAAAGATGAT+TGG - chr6_1:81880313-81880332 Msa0895120:intron 25.0%
! CAAAAATTGAAACATGCAAT+AGG + chr6_1:81880382-81880401 None:intergenic 25.0%
!!! TTGTTATTCTACATTTTCGT+TGG - chr6_1:81880399-81880418 Msa0895120:intron 25.0%
!! TGTTATTCTACATTTTCGTT+GGG - chr6_1:81880400-81880419 Msa0895120:intron 25.0%
!!! CATTATGTTTTGGATATCTT+TGG - chr6_1:81880466-81880485 Msa0895120:intron 25.0%
!!! GATATGATTTTAGAAGTTTG+TGG - chr6_1:81880582-81880601 Msa0895120:intron 25.0%
! ATGGATCAAAAATAAGAACA+TGG + chr6_1:81880672-81880691 None:intergenic 25.0%
!! AACATCCAGTAACAAATTTT+AGG - chr6_1:81880774-81880793 Msa0895120:intron 25.0%
!! ACATCCAGTAACAAATTTTA+GGG - chr6_1:81880775-81880794 Msa0895120:intron 25.0%
! AAAAAAAAGGCGACAATATT+TGG - chr6_1:81881025-81881044 Msa0895120:intron 25.0%
! ATCAGAAAAAACTGATATGT+TGG + chr6_1:81881098-81881117 None:intergenic 25.0%
!! TTGCTGTTGAATTTCATTAT+AGG - chr6_1:81881152-81881171 Msa0895120:intron 25.0%
! TGCTGTTGAATTTCATTATA+GGG - chr6_1:81881153-81881172 Msa0895120:intron 25.0%
! AATTTCATTATAGGGGAATT+TGG - chr6_1:81881161-81881180 Msa0895120:intron 25.0%
!!! ATCTTTTTTAAACGGCAATT+TGG - chr6_1:81881484-81881503 Msa0895120:intron 25.0%
! GACAGATAAAATATACAAAG+TGG - chr6_1:81881525-81881544 Msa0895120:intron 25.0%
!!! AATTTTCTTTTTTCAGGCTT+TGG - chr6_1:81881576-81881595 Msa0895120:intron 25.0%
! TATCTATATATCAAGCATGA+GGG + chr6_1:81881636-81881655 None:intergenic 25.0%
! AAAATAGGCAAACTTGAATT+AGG + chr6_1:81881799-81881818 None:intergenic 25.0%
! TGTTCTTTGAGAGATGTTAA+TGG - chr6_1:81871019-81871038 Msa0895120:three_prime_UTR 30.0%
! GTTCTTTGAGAGATGTTAAT+GGG - chr6_1:81871020-81871039 Msa0895120:three_prime_UTR 30.0%
TCCTTCAAAATTCACAATTG+CGG - chr6_1:81871390-81871409 Msa0895120:intron 30.0%
CTCGTCAAATAATTGAAACT+TGG - chr6_1:81871547-81871566 Msa0895120:intron 30.0%
!! TCAGTATTGGTGTTATATCA+AGG - chr6_1:81871609-81871628 Msa0895120:intron 30.0%
!! CAGTATTGGTGTTATATCAA+GGG - chr6_1:81871610-81871629 Msa0895120:intron 30.0%
TTTCTGATGTTGTGGTTATA+GGG - chr6_1:81871845-81871864 Msa0895120:intron 30.0%
TGGCATTAATTCAACTAGAA+TGG - chr6_1:81871952-81871971 Msa0895120:intron 30.0%
!!! AAAGAATCTTTTTTACAGGG+GGG + chr6_1:81875806-81875825 None:intergenic 30.0%
!!! GAAAGAATCTTTTTTACAGG+GGG + chr6_1:81875805-81875824 None:intergenic 30.0%
!!! CGAAAGAATCTTTTTTACAG+GGG + chr6_1:81875804-81875823 None:intergenic 30.0%
!!! ATTTTTTTAATAGGGACACG+TGG - chr6_1:81872292-81872311 Msa0895120:intron 30.0%
! TTTCCGGTATTGAAAAAATC+TGG + chr6_1:81875360-81875379 None:intergenic 30.0%
! CAATGTATATTGATTGACAC+CGG + chr6_1:81873039-81873058 None:intergenic 30.0%
! TTAGTGTCTACTAGTTTCAA+TGG - chr6_1:81872966-81872985 Msa0895120:intron 30.0%
! CAATGTATATTGATTGACAC+CGG - chr6_1:81873039-81873058 Msa0895120:intron 30.0%
CGTACAAACAATAGAAAAAC+TGG - chr6_1:81873383-81873402 Msa0895120:three_prime_UTR 30.0%
AATTCTACAGCAAAAACGAT+TGG + chr6_1:81873472-81873491 None:intergenic 30.0%
!! AATTTGCTGAGATAAGGTAA+GGG - chr6_1:81873488-81873507 Msa0895120:intron 30.0%
AGGTTTATTAGACAACATAG+GGG + chr6_1:81873657-81873676 None:intergenic 30.0%
CAGGTTTATTAGACAACATA+GGG + chr6_1:81873658-81873677 None:intergenic 30.0%
ACAGGTTTATTAGACAACAT+AGG + chr6_1:81873659-81873678 None:intergenic 30.0%
GTGATTATGGGATCAAATTT+GGG - chr6_1:81873703-81873722 Msa0895120:intron 30.0%
TGATTATGGGATCAAATTTG+GGG - chr6_1:81873704-81873723 Msa0895120:intron 30.0%
AACTTTCATGTTTACACCTA+AGG + chr6_1:81873970-81873989 None:intergenic 30.0%
!!! CATATGTTTTTGGACTAACT+TGG + chr6_1:81874121-81874140 None:intergenic 30.0%
CAAGTTAGTCCAAAAACATA+TGG - chr6_1:81874119-81874138 Msa0895120:intron 30.0%
TTAGTCCAAAAACATATGGT+TGG - chr6_1:81874123-81874142 Msa0895120:intron 30.0%
! CTAACACTTAAGTTTGAAGT+TGG + chr6_1:81874153-81874172 None:intergenic 30.0%
CAACTTCAAACTTAAGTGTT+AGG - chr6_1:81874151-81874170 Msa0895120:intron 30.0%
!! ACTTAGTTGAGGTGTTTTAT+GGG - chr6_1:81874175-81874194 Msa0895120:three_prime_UTR 30.0%
AATGTTTATCATTCACCTGT+TGG - chr6_1:81874506-81874525 Msa0895120:three_prime_UTR 30.0%
ATGTTTATCATTCACCTGTT+GGG - chr6_1:81874507-81874526 Msa0895120:three_prime_UTR 30.0%
TTTAAAGAATTATTCCGCTG+CGG - chr6_1:81875162-81875181 Msa0895120:CDS 30.0%
TAATCAGAGTAATCACACAA+CGG + chr6_1:81875266-81875285 None:intergenic 30.0%
! TTTCCGGTATTGAAAAAATC+TGG - chr6_1:81875360-81875379 Msa0895120:intron 30.0%
!!! TTTTTTTTAATAGGGACACG+TGG + chr6_1:81875653-81875672 None:intergenic 30.0%
!!! CGAAAGAATCTTTTTTACAG+GGG - chr6_1:81875804-81875823 Msa0895120:intron 30.0%
!!! GAAAGAATCTTTTTTACAGG+GGG - chr6_1:81875805-81875824 Msa0895120:intron 30.0%
!!! AAAGAATCTTTTTTACAGGG+GGG - chr6_1:81875806-81875825 Msa0895120:intron 30.0%
! TCCTTTTCGCATATTTACTT+TGG - chr6_1:81875897-81875916 Msa0895120:CDS 30.0%
TCCAAAGTAAATATGCGAAA+AGG + chr6_1:81875901-81875920 None:intergenic 30.0%
AGATTACTGAACTGATAACA+AGG - chr6_1:81876139-81876158 Msa0895120:intron 30.0%
! CATACAACTCTTTCCAATTT+TGG + chr6_1:81876231-81876250 None:intergenic 30.0%
TGAAAAAGAAAGCAAGTTTC+TGG + chr6_1:81876365-81876384 None:intergenic 30.0%
TGTGTCCAAAATTCATGATA+TGG - chr6_1:81876390-81876409 Msa0895120:intron 30.0%
! CCTTTCCATATCATGAATTT+TGG + chr6_1:81876398-81876417 None:intergenic 30.0%
CCAAAATTCATGATATGGAA+AGG - chr6_1:81876395-81876414 Msa0895120:intron 30.0%
ATCAAAGAGCTTTCTATATC+AGG + chr6_1:81876430-81876449 None:intergenic 30.0%
!!! ATTGGTTTTGGATTGGATTA+TGG - chr6_1:81876467-81876486 Msa0895120:intron 30.0%
!!! AGCGATGAGTGTTTTATTTT+TGG - chr6_1:81876554-81876573 Msa0895120:intron 30.0%
AAGACATTGAATTGAATTGC+TGG + chr6_1:81876788-81876807 None:intergenic 30.0%
TATTTCTCTCATCGTCATTA+TGG + chr6_1:81876834-81876853 None:intergenic 30.0%
! TACACAATTTTCGTGCTTAT+TGG - chr6_1:81876928-81876947 Msa0895120:intron 30.0%
! ACTAAGAAGATTTTTGTTGG+TGG - chr6_1:81877336-81877355 Msa0895120:intron 30.0%
AAGAACTTCTTCTCAAAGTA+TGG - chr6_1:81877567-81877586 Msa0895120:intron 30.0%
AGAACTTCTTCTCAAAGTAT+GGG - chr6_1:81877568-81877587 Msa0895120:intron 30.0%
TCTCATTTCTAATTACAGGA+AGG + chr6_1:81877617-81877636 None:intergenic 30.0%
AAAATATTCAAAGTGAAGGG+AGG - chr6_1:81877710-81877729 Msa0895120:intron 30.0%
AAATATTCAAAGTGAAGGGA+GGG - chr6_1:81877711-81877730 Msa0895120:intron 30.0%
CTAACTATTGAAAGCAATGT+GGG - chr6_1:81877861-81877880 Msa0895120:intron 30.0%
! TGATGTTGATTATCTAGAGT+TGG - chr6_1:81877913-81877932 Msa0895120:intron 30.0%
!!! CGAGCTTTTAAGTTTTTACT+TGG - chr6_1:81878105-81878124 Msa0895120:intron 30.0%
TGAAATTGTGGATAGATATG+CGG - chr6_1:81878136-81878155 Msa0895120:intron 30.0%
! AAGATATTGAGAGCTCTAAT+CGG - chr6_1:81878362-81878381 Msa0895120:intron 30.0%
GTCAAAATTCATGCCAATAA+AGG + chr6_1:81878489-81878508 None:intergenic 30.0%
TTAAGAGTGATTACCACTAT+AGG + chr6_1:81878584-81878603 None:intergenic 30.0%
TTTGCTTTGTAATGCATGTT+TGG - chr6_1:81878749-81878768 Msa0895120:intron 30.0%
TTGCTTTGTAATGCATGTTT+GGG - chr6_1:81878750-81878769 Msa0895120:intron 30.0%
TTTGCACTTAACATAGATAC+CGG - chr6_1:81878923-81878942 Msa0895120:intron 30.0%
! AGTGTTTGTATCAAAGTATC+CGG + chr6_1:81878973-81878992 None:intergenic 30.0%
TTAGTAACTCTCTTTACTGT+AGG - chr6_1:81879281-81879300 Msa0895120:intron 30.0%
TAGTAACTCTCTTTACTGTA+GGG - chr6_1:81879282-81879301 Msa0895120:intron 30.0%
!!! ACATTTTGAAATGCATGCAT+AGG + chr6_1:81879470-81879489 None:intergenic 30.0%
! GATAGTGATTGTCCAAATTT+TGG - chr6_1:81879533-81879552 Msa0895120:intron 30.0%
ACTTCAAAAAGTGAGCAAAA+TGG + chr6_1:81879580-81879599 None:intergenic 30.0%
!!! AATGTAGCTTTTGGTTTTCA+AGG - chr6_1:81879621-81879640 Msa0895120:intron 30.0%
!!! ATGTAGCTTTTGGTTTTCAA+GGG - chr6_1:81879622-81879641 Msa0895120:intron 30.0%
AAGTGTAAGCATAACTAAGT+TGG + chr6_1:81879762-81879781 None:intergenic 30.0%
AACTTAGTTATGCTTACACT+TGG - chr6_1:81879761-81879780 Msa0895120:intron 30.0%
! GTGTACCTTTTAAACTTAGT+TGG - chr6_1:81879857-81879876 Msa0895120:intron 30.0%
TGTAATAACTTCAGCTAGTA+AGG + chr6_1:81879892-81879911 None:intergenic 30.0%
ATAAGAGTTGAATCACAAGA+AGG - chr6_1:81879983-81880002 Msa0895120:intron 30.0%
GTGATGCTCTAATTGAATAA+GGG + chr6_1:81880024-81880043 None:intergenic 30.0%
AGTGATGCTCTAATTGAATA+AGG + chr6_1:81880025-81880044 None:intergenic 30.0%
CTTATATCAGACAATAAACC+TGG + chr6_1:81880064-81880083 None:intergenic 30.0%
CATAGTTTAATGTGTCTTGA+AGG - chr6_1:81880146-81880165 Msa0895120:intron 30.0%
TCGATTTCAATTTCAATCGA+TGG + chr6_1:81880295-81880314 None:intergenic 30.0%
! ACTGTAAAAGATGATTGGTT+TGG - chr6_1:81880318-81880337 Msa0895120:intron 30.0%
! TTGGTTGCATGTTTTCAAAA+AGG - chr6_1:81880436-81880455 Msa0895120:intron 30.0%
! TGGTTGCATGTTTTCAAAAA+GGG - chr6_1:81880437-81880456 Msa0895120:intron 30.0%
! AGGGTCTTTTCATTATGTTT+TGG - chr6_1:81880456-81880475 Msa0895120:intron 30.0%
!! TGTTTTGGATATCTTTGGTT+AGG - chr6_1:81880471-81880490 Msa0895120:intron 30.0%
AAATAAGAACATGGAGAAGA+TGG + chr6_1:81880663-81880682 None:intergenic 30.0%
!! GGTCATTTTCCATTATAGTA+TGG + chr6_1:81880691-81880710 None:intergenic 30.0%
GCTCAAGCTAAAAATTTAAG+AGG + chr6_1:81880712-81880731 None:intergenic 30.0%
!! CTTTCCCTAAAATTTGTTAC+TGG + chr6_1:81880782-81880801 None:intergenic 30.0%
!! CAGTAACAAATTTTAGGGAA+AGG - chr6_1:81880780-81880799 Msa0895120:intron 30.0%
!! GATGCTACATTGTATTTTAG+AGG - chr6_1:81880920-81880939 Msa0895120:intron 30.0%
GCTGTTGAATTTCATTATAG+GGG - chr6_1:81881154-81881173 Msa0895120:intron 30.0%
AAGAAACACCTGACAAAAAA+TGG - chr6_1:81881291-81881310 Msa0895120:CDS 30.0%
!!! TTAGTGAACCATTTTTTGTC+AGG + chr6_1:81881302-81881321 None:intergenic 30.0%
! TGATTTGATAGTAGCATTCA+TGG - chr6_1:81881339-81881358 Msa0895120:intron 30.0%
! GATTTGATAGTAGCATTCAT+GGG - chr6_1:81881340-81881359 Msa0895120:intron 30.0%
CTATCTATATATCAAGCATG+AGG + chr6_1:81881637-81881656 None:intergenic 30.0%
!!! TAGATAGTTTTTGGGATGAA+TGG - chr6_1:81881650-81881669 Msa0895120:five_prime_UTR 30.0%
AGTACATACGATGCAAAAAT+AGG + chr6_1:81881814-81881833 None:intergenic 30.0%
! ATGATGATGATGAACAGAAC+AGG + chr6_1:81870968-81870987 None:intergenic 35.0%
! AATTTTGCTTGCATGCATTC+AGG - chr6_1:81871180-81871199 Msa0895120:intron 35.0%
!! GCAATTGTGAATTTTGAAGG+AGG + chr6_1:81871391-81871410 None:intergenic 35.0%
! ACCGCAATTGTGAATTTTGA+AGG + chr6_1:81871394-81871413 None:intergenic 35.0%
AAGAATTTCGCTAATCTAGC+AGG + chr6_1:81871437-81871456 None:intergenic 35.0%
!! TTAAGAAGCTTCTGGAACTT+CGG + chr6_1:81871461-81871480 None:intergenic 35.0%
! TCTTAAGCGTGAAGTGTTTA+AGG - chr6_1:81871475-81871494 Msa0895120:intron 35.0%
! AATAGAGTCACTCTGTTTCT+AGG - chr6_1:81871582-81871601 Msa0895120:intron 35.0%
!! TGGTGTTATATCAAGGGTTA+AGG - chr6_1:81871616-81871635 Msa0895120:intron 35.0%
AGGGTTAAGGAACTATTCAA+AGG - chr6_1:81871629-81871648 Msa0895120:intron 35.0%
!! GGTCACAACCATTTGATTTT+TGG - chr6_1:81871650-81871669 Msa0895120:intron 35.0%
TTTAACACTTTCCTGCCAAA+AGG - chr6_1:81871674-81871693 Msa0895120:intron 35.0%
! GACATTTTGCATCAAACAGA+AGG - chr6_1:81871701-81871720 Msa0895120:intron 35.0%
ACATGTACTTTCTGATGTTG+TGG - chr6_1:81871837-81871856 Msa0895120:intron 35.0%
CTTTCTGATGTTGTGGTTAT+AGG - chr6_1:81871844-81871863 Msa0895120:intron 35.0%
TTCTGATGTTGTGGTTATAG+GGG - chr6_1:81871846-81871865 Msa0895120:intron 35.0%
GAAACATGGAAGAAGAAAGA+AGG + chr6_1:81872015-81872034 None:intergenic 35.0%
! TTTTTACCCCCCTGTAATAT+AGG - chr6_1:81872093-81872112 Msa0895120:intron 35.0%
GAATCTTCATATTTCAGGGT+TGG + chr6_1:81875778-81875797 None:intergenic 35.0%
GACGGAATCTTCATATTTCA+GGG + chr6_1:81875774-81875793 None:intergenic 35.0%
!! TGTATCTTGTTATTCGGACA+TGG - chr6_1:81872754-81872773 Msa0895120:three_prime_UTR 35.0%
!!! ACTGGTTTTTGGAGAGAAAA+AGG - chr6_1:81873401-81873420 Msa0895120:three_prime_UTR 35.0%
!! CTGTAGAATTTGCTGAGATA+AGG - chr6_1:81873482-81873501 Msa0895120:intron 35.0%
!! GAATTTGCTGAGATAAGGTA+AGG - chr6_1:81873487-81873506 Msa0895120:intron 35.0%
GGGATTCCTTTCAATAATCA+TGG - chr6_1:81873512-81873531 Msa0895120:intron 35.0%
GGTGATTATGGGATCAAATT+TGG - chr6_1:81873702-81873721 Msa0895120:intron 35.0%
!! GTTGATGAAATTGGGGTTTT+TGG - chr6_1:81873732-81873751 Msa0895120:intron 35.0%
ACTATTACATCGTACTACGA+TGG + chr6_1:81873887-81873906 None:intergenic 35.0%
!! AGTTAGCTTTAAAATGGCCT+TGG - chr6_1:81874001-81874020 Msa0895120:intron 35.0%
!! AAGTTTTCTGAAGATCCACT+TGG + chr6_1:81874074-81874093 None:intergenic 35.0%
! GGAAACCAACCATATGTTTT+TGG + chr6_1:81874131-81874150 None:intergenic 35.0%
!! GACTTAGTTGAGGTGTTTTA+TGG - chr6_1:81874174-81874193 Msa0895120:three_prime_UTR 35.0%
!! TGAGGTGTTTTATGGGTATT+TGG - chr6_1:81874182-81874201 Msa0895120:three_prime_UTR 35.0%
TGATACAACGACATCAACAA+CGG + chr6_1:81874306-81874325 None:intergenic 35.0%
TATCATCTGATGTCGAAGTT+GGG - chr6_1:81874321-81874340 Msa0895120:three_prime_UTR 35.0%
GAGTGTGTCATAATTGTTGT+AGG - chr6_1:81874344-81874363 Msa0895120:three_prime_UTR 35.0%
ACAGAACATGAGTATGCATA+TGG + chr6_1:81874429-81874448 None:intergenic 35.0%
TATGCATACTCATGTTCTGT+TGG - chr6_1:81874429-81874448 Msa0895120:three_prime_UTR 35.0%
ATGCATACTCATGTTCTGTT+GGG - chr6_1:81874430-81874449 Msa0895120:three_prime_UTR 35.0%
GGTGAATGATAAACATTCCA+GGG + chr6_1:81874503-81874522 None:intergenic 35.0%
AGGTGAATGATAAACATTCC+AGG + chr6_1:81874504-81874523 None:intergenic 35.0%
TGTTTATCATTCACCTGTTG+GGG - chr6_1:81874508-81874527 Msa0895120:three_prime_UTR 35.0%
CTTTAACCATCCAAATCGTT+GGG - chr6_1:81874548-81874567 Msa0895120:three_prime_UTR 35.0%
TTTAACCATCCAAATCGTTG+GGG - chr6_1:81874549-81874568 Msa0895120:three_prime_UTR 35.0%
ACAACAAAGCATATCACAAC+AGG + chr6_1:81874828-81874847 None:intergenic 35.0%
CAATGAAAATCTTGGCACAT+AGG + chr6_1:81875115-81875134 None:intergenic 35.0%
AGAATCTTAATAAACCGCAG+CGG + chr6_1:81875179-81875198 None:intergenic 35.0%
ATATTACGTTGTTGGGAGAA+CGG - chr6_1:81875295-81875314 Msa0895120:intron 35.0%
GACGGAATCTTCATATTTCA+GGG - chr6_1:81875774-81875793 Msa0895120:intron 35.0%
GAATCTTCATATTTCAGGGT+TGG - chr6_1:81875778-81875797 Msa0895120:intron 35.0%
CGCATATTTACTTTGGATTG+AGG - chr6_1:81875904-81875923 Msa0895120:CDS 35.0%
! ACTTTGGATTGAGGTTGATT+CGG - chr6_1:81875913-81875932 Msa0895120:CDS 35.0%
!! ATTGTTGCGCTTTGAAACTA+TGG - chr6_1:81875974-81875993 Msa0895120:intron 35.0%
!! TCTTATTTGGTGCCACATTT+AGG - chr6_1:81876205-81876224 Msa0895120:intron 35.0%
!! TTCCAATTTTGGCCTAAATG+TGG + chr6_1:81876220-81876239 None:intergenic 35.0%
TATTGATGTATCCCAAAGCT+AGG + chr6_1:81876493-81876512 None:intergenic 35.0%
! TTCTTTGTTGTGATTCAAGC+AGG - chr6_1:81877007-81877026 Msa0895120:intron 35.0%
!! ATCAGTTTGCATTTTGACCA+TGG + chr6_1:81877049-81877068 None:intergenic 35.0%
TCACATCATCAATGACAAGA+AGG - chr6_1:81877145-81877164 Msa0895120:intron 35.0%
AACCAAGAGGACTATTACAA+AGG - chr6_1:81877287-81877306 Msa0895120:intron 35.0%
ACCAAGAGGACTATTACAAA+GGG - chr6_1:81877288-81877307 Msa0895120:intron 35.0%
GAACTTCTTCTCAAAGTATG+GGG - chr6_1:81877569-81877588 Msa0895120:intron 35.0%
!! TCTAATTACAGGAAGGTGTT+CGG + chr6_1:81877610-81877629 None:intergenic 35.0%
AATATTCAAAGTGAAGGGAG+GGG - chr6_1:81877712-81877731 Msa0895120:intron 35.0%
TGCTGAAGCAAAGAGTAATT+AGG - chr6_1:81877788-81877807 Msa0895120:intron 35.0%
GCTAACTATTGAAAGCAATG+TGG - chr6_1:81877860-81877879 Msa0895120:intron 35.0%
TAAAGAGCTTGCAAATATGC+AGG - chr6_1:81877937-81877956 Msa0895120:intron 35.0%
! ATTACATGAGGTACCTTCAT+TGG - chr6_1:81878178-81878197 Msa0895120:intron 35.0%
TAATGATCAATGTTCGTCGA+TGG - chr6_1:81878236-81878255 Msa0895120:intron 35.0%
GACAACAACAATTGCTATAG+AGG - chr6_1:81878322-81878341 Msa0895120:intron 35.0%
! AGATATTGAGAGCTCTAATC+GGG - chr6_1:81878363-81878382 Msa0895120:intron 35.0%
TCTAATCGGGCATAAGAATT+TGG - chr6_1:81878376-81878395 Msa0895120:intron 35.0%
! AGCATTTTCTTCGTCTTCAT+AGG + chr6_1:81878417-81878436 None:intergenic 35.0%
ATGCTTATGTAGTTATGGGA+CGG - chr6_1:81878432-81878451 Msa0895120:intron 35.0%
ATCAACAGTTCTGTCACTAA+TGG + chr6_1:81878559-81878578 None:intergenic 35.0%
GAACTGTTGATATCCTATAG+TGG - chr6_1:81878568-81878587 Msa0895120:intron 35.0%
! GATTTTTATGCCGGATTTGT+TGG - chr6_1:81878712-81878731 Msa0895120:intron 35.0%
TATGTGTTTGTGTTTGAGTC+TGG - chr6_1:81878852-81878871 Msa0895120:intron 35.0%
ATGTGTTTGTGTTTGAGTCT+GGG - chr6_1:81878853-81878872 Msa0895120:intron 35.0%
! ACTCCATCAATTTGAAGTGT+CGG - chr6_1:81879098-81879117 Msa0895120:intron 35.0%
CACAAGGGTAACAAACTATA+TGG + chr6_1:81879126-81879145 None:intergenic 35.0%
! CTTATCTCATCACTGTCTTT+TGG + chr6_1:81879968-81879987 None:intergenic 35.0%
!! TCACAAGAAGGTGGATTAAA+TGG - chr6_1:81879995-81880014 Msa0895120:intron 35.0%
CTATGTTGTGAATACAAACC+AGG - chr6_1:81880043-81880062 Msa0895120:intron 35.0%
GTTGGAATACAATGAAACTG+AGG + chr6_1:81880193-81880212 None:intergenic 35.0%
!! GTGTTGTTCGTTTTATTGCA+AGG - chr6_1:81880253-81880272 Msa0895120:intron 35.0%
CAATTTCAATCGATGGAATG+AGG + chr6_1:81880288-81880307 None:intergenic 35.0%
GATTTCTGAGTCAACTTCAA+TGG - chr6_1:81880604-81880623 Msa0895120:intron 35.0%
TTGGATCACAACTTTCTTAC+AGG + chr6_1:81880637-81880656 None:intergenic 35.0%
TTGTTACTGGATGTTGCAAA+CGG + chr6_1:81880769-81880788 None:intergenic 35.0%
!! AAAGACGTTGATTCCTCTAA+TGG - chr6_1:81880889-81880908 Msa0895120:intron 35.0%
GCATCAAAATGAACCATTAG+AGG + chr6_1:81880905-81880924 None:intergenic 35.0%
ACTTTGATCTACCTCATTTG+TGG - chr6_1:81881122-81881141 Msa0895120:intron 35.0%
GCAAATAAACACCACAAATG+AGG + chr6_1:81881136-81881155 None:intergenic 35.0%
TTGGATCAGTAGATCATAAC+AGG - chr6_1:81881503-81881522 Msa0895120:intron 35.0%
TGTTAAGGTTAAGACACATG+AGG - chr6_1:81881737-81881756 Msa0895120:intron 35.0%
ATAGGCAAACTTGAATTAGG+TGG + chr6_1:81881796-81881815 None:intergenic 35.0%
AACCTGAGAAATAGAGCAAC+CGG + chr6_1:81870940-81870959 None:intergenic 40.0%
! GTTGCTCTATTTCTCAGGTT+CGG - chr6_1:81870940-81870959 Msa0895120:three_prime_UTR 40.0%
AAATACCTGGACATGAGCTA+TGG + chr6_1:81871128-81871147 None:intergenic 40.0%
! TGAAGTGTTTAAGGCGAAAC+CGG - chr6_1:81871484-81871503 Msa0895120:intron 40.0%
ATAAGACGTGTAGTTGAAGC+TGG - chr6_1:81871521-81871540 Msa0895120:intron 40.0%
!! GTTTCTAGGACTGTCAGTAT+TGG - chr6_1:81871596-81871615 Msa0895120:intron 40.0%
AAGACTCCATGGTTTCTAAC+AGG - chr6_1:81871884-81871903 Msa0895120:intron 40.0%
AAGCTACCTGTTAGAAACCA+TGG + chr6_1:81871893-81871912 None:intergenic 40.0%
! AGGTAGCTTATGCTTTTCCT+TGG - chr6_1:81871904-81871923 Msa0895120:intron 40.0%
ATGGAAGAAGAAAGAAGGAG+AGG + chr6_1:81872010-81872029 None:intergenic 40.0%
!!! TTTTTTACAGGGGGGAAAAC+CGG + chr6_1:81875814-81875833 None:intergenic 40.0%
CGACGGAATCTTCATATTTC+AGG + chr6_1:81875773-81875792 None:intergenic 40.0%
CATCATCAAAAAAGGTGACG+TGG + chr6_1:81872238-81872257 None:intergenic 40.0%
!!! CGTCACCTTTTTTGATGATG+TGG - chr6_1:81872238-81872257 Msa0895120:intron 40.0%
AGAAGAACCAAGAGAAAGCT+AGG - chr6_1:81873424-81873443 Msa0895120:three_prime_UTR 40.0%
! ATGGGATCAAATTTGGGGTT+TGG - chr6_1:81873709-81873728 Msa0895120:intron 40.0%
! TGGGATCAAATTTGGGGTTT+GGG - chr6_1:81873710-81873729 Msa0895120:intron 40.0%
!! GGGTTTGGGTTGATGAAATT+GGG - chr6_1:81873724-81873743 Msa0895120:intron 40.0%
!! GGTTTGGGTTGATGAAATTG+GGG - chr6_1:81873725-81873744 Msa0895120:intron 40.0%
ATGGAACATGGACAGTTCTA+CGG + chr6_1:81873777-81873796 None:intergenic 40.0%
!! GAAAAAGTCTTGTTTGCTGC+TGG + chr6_1:81873836-81873855 None:intergenic 40.0%
AGGCCAGTTCAAAACAGAAA+CGG + chr6_1:81873950-81873969 None:intergenic 40.0%
!!! TTCTGTTTTGAACTGGCCTT+AGG - chr6_1:81873951-81873970 Msa0895120:intron 40.0%
!! GCTTTAAAATGGCCTTGGTT+TGG - chr6_1:81874006-81874025 Msa0895120:intron 40.0%
! ATCTTTTCCACTCCAAACCA+AGG + chr6_1:81874021-81874040 None:intergenic 40.0%
AAGTGTTAGGGACTTAGTTG+AGG - chr6_1:81874164-81874183 Msa0895120:intron 40.0%
GTATCATCTGATGTCGAAGT+TGG - chr6_1:81874320-81874339 Msa0895120:three_prime_UTR 40.0%
ATCATCTGATGTCGAAGTTG+GGG - chr6_1:81874322-81874341 Msa0895120:three_prime_UTR 40.0%
TGCATACTCATGTTCTGTTG+GGG - chr6_1:81874431-81874450 Msa0895120:three_prime_UTR 40.0%
GTTTATCATTCACCTGTTGG+GGG - chr6_1:81874509-81874528 Msa0895120:three_prime_UTR 40.0%
GCTTTAACCATCCAAATCGT+TGG - chr6_1:81874547-81874566 Msa0895120:three_prime_UTR 40.0%
TTAACCATCCAAATCGTTGG+GGG - chr6_1:81874550-81874569 Msa0895120:three_prime_UTR 40.0%
GTTGAATGCTAAGCATTCCA+GGG + chr6_1:81874582-81874601 None:intergenic 40.0%
CAACAACTAATGCATCATGC+AGG + chr6_1:81874623-81874642 None:intergenic 40.0%
TGTTGTTGTCGTAGCATTGT+TGG - chr6_1:81874638-81874657 Msa0895120:three_prime_UTR 40.0%
GTTGTTGTCGTAGCATTGTT+GGG - chr6_1:81874639-81874658 Msa0895120:three_prime_UTR 40.0%
! GTACTGATGACTTGTAGGTT+TGG - chr6_1:81874941-81874960 Msa0895120:three_prime_UTR 40.0%
! TGATGACTTGTAGGTTTGGT+CGG - chr6_1:81874945-81874964 Msa0895120:three_prime_UTR 40.0%
GCTCTGATACATACTAGGAT+GGG - chr6_1:81874982-81875001 Msa0895120:three_prime_UTR 40.0%
CTCTGATACATACTAGGATG+GGG - chr6_1:81874983-81875002 Msa0895120:three_prime_UTR 40.0%
TATTACGTTGTTGGGAGAAC+GGG - chr6_1:81875296-81875315 Msa0895120:intron 40.0%
CGACGGAATCTTCATATTTC+AGG - chr6_1:81875773-81875792 Msa0895120:intron 40.0%
!!! TTTTTTACAGGGGGGAAAAC+CGG - chr6_1:81875814-81875833 Msa0895120:intron 40.0%
!! TGCGCTTTGAAACTATGGTT+TGG - chr6_1:81875979-81875998 Msa0895120:intron 40.0%
!! GCGCTTTGAAACTATGGTTT+GGG - chr6_1:81875980-81875999 Msa0895120:intron 40.0%
GATAACAAGGCTGATCATGA+TGG - chr6_1:81876152-81876171 Msa0895120:intron 40.0%
TGCCACATTTAGGCCAAAAT+TGG - chr6_1:81876215-81876234 Msa0895120:intron 40.0%
ATTGGATTATGGCCTAGCTT+TGG - chr6_1:81876478-81876497 Msa0895120:intron 40.0%
! TTGGATTATGGCCTAGCTTT+GGG - chr6_1:81876479-81876498 Msa0895120:intron 40.0%
TCATTATGGAGTGAACTTGC+TGG + chr6_1:81876820-81876839 None:intergenic 40.0%
!! TGTTGATGGTCGAGATAGAA+AGG - chr6_1:81876865-81876884 Msa0895120:intron 40.0%
GATAGTCTGCTACATTACCA+TGG - chr6_1:81877029-81877048 Msa0895120:intron 40.0%
!! CATATCAGGTTGAAACCAAG+AGG - chr6_1:81877274-81877293 Msa0895120:intron 40.0%
ACCCTTTGTAATAGTCCTCT+TGG + chr6_1:81877292-81877311 None:intergenic 40.0%
ATTCCAGCAACTGTATCTGA+AGG - chr6_1:81877360-81877379 Msa0895120:intron 40.0%
AAACCTTCAGATACAGTTGC+TGG + chr6_1:81877366-81877385 None:intergenic 40.0%
AGCTTATTGTATGCTTGCCT+TGG - chr6_1:81877523-81877542 Msa0895120:intron 40.0%
GCTTATTGTATGCTTGCCTT+GGG - chr6_1:81877524-81877543 Msa0895120:intron 40.0%
! TCATCTGAAACACAAACCCA+AGG + chr6_1:81877543-81877562 None:intergenic 40.0%
AATGAGAACAAGTCGACATG+AGG - chr6_1:81877630-81877649 Msa0895120:intron 40.0%
AATTGCATTAGGTGCAGCTA+AGG - chr6_1:81877978-81877997 Msa0895120:intron 40.0%
TTATGTAGTTATGGGACGGA+GGG - chr6_1:81878436-81878455 Msa0895120:intron 40.0%
AACAGTTCTGTCACTAATGG+AGG + chr6_1:81878556-81878575 None:intergenic 40.0%
!!! TTTTATGCCGGATTTGTTGG+TGG - chr6_1:81878715-81878734 Msa0895120:intron 40.0%
!! TTTATGCCGGATTTGTTGGT+GGG - chr6_1:81878716-81878735 Msa0895120:intron 40.0%
! TGAGTCTGGGATAGTTAAAC+TGG - chr6_1:81878866-81878885 Msa0895120:intron 40.0%
TAACCATGTCAGTATTGTGC+CGG - chr6_1:81879037-81879056 Msa0895120:intron 40.0%
TTGTTGGACGCTGAAACAAT+TGG - chr6_1:81879499-81879518 Msa0895120:intron 40.0%
AGAGTTGAATCACAAGAAGG+TGG - chr6_1:81879986-81880005 Msa0895120:intron 40.0%
! CTCTGGAAGAAGGTAACAAA+CGG + chr6_1:81880230-81880249 None:intergenic 40.0%
AAAACGAACAACACGTTCTC+TGG + chr6_1:81880247-81880266 None:intergenic 40.0%
!!! CATTTTCGTTGGGCTTTGTT+TGG - chr6_1:81880410-81880429 Msa0895120:intron 40.0%
TTTGCTACACCTGTGTTTGA+TGG - chr6_1:81880504-81880523 Msa0895120:intron 40.0%
AGATTCATGCCATCAAACAC+AGG + chr6_1:81880516-81880535 None:intergenic 40.0%
AACATGGAGAAGATGGTACT+TGG + chr6_1:81880656-81880675 None:intergenic 40.0%
AGAGATGGATCAAAACACAG+GGG + chr6_1:81881064-81881083 None:intergenic 40.0%
CAGAGATGGATCAAAACACA+GGG + chr6_1:81881065-81881084 None:intergenic 40.0%
ACAGAGATGGATCAAAACAC+AGG + chr6_1:81881066-81881085 None:intergenic 40.0%
TATATCAAGCATGAGGGAAG+TGG + chr6_1:81881630-81881649 None:intergenic 40.0%
TGAGAGAAACGGGAGAAGAA+GGG - chr6_1:81870865-81870884 Msa0895120:three_prime_UTR 45.0%
ACGGAAAGGGAGGAGAAAAA+CGG - chr6_1:81870903-81870922 Msa0895120:three_prime_UTR 45.0%
AGAAATAGAGCAACCGGAGT+CGG + chr6_1:81870934-81870953 None:intergenic 45.0%
TGGACATGAGCTATGGCTAT+GGG + chr6_1:81871121-81871140 None:intergenic 45.0%
GCGGTGTTCGATTGAATTTC+CGG - chr6_1:81871409-81871428 Msa0895120:intron 45.0%
TTCGCTAATCTAGCAGGTTC+CGG + chr6_1:81871431-81871450 None:intergenic 45.0%
CTTCACGCTTAAGAAGCTTC+TGG + chr6_1:81871469-81871488 None:intergenic 45.0%
CTTATCAACGCCAATAACGC+CGG + chr6_1:81871506-81871525 None:intergenic 45.0%
! TGCAAAATGTCCGCTCCTTT+TGG + chr6_1:81871692-81871711 None:intergenic 45.0%
GAAACCATGGAGTCTTCAAG+TGG + chr6_1:81871880-81871899 None:intergenic 45.0%
AGGAGAGGAAATGACAGATG+TGG + chr6_1:81871995-81872014 None:intergenic 45.0%
AACTCGCCTATATTACAGGG+GGG + chr6_1:81875837-81875856 None:intergenic 45.0%
GAACTCGCCTATATTACAGG+GGG + chr6_1:81875836-81875855 None:intergenic 45.0%
GGAACTCGCCTATATTACAG+GGG + chr6_1:81875835-81875854 None:intergenic 45.0%
CGGAACTCGCCTATATTACA+GGG + chr6_1:81875834-81875853 None:intergenic 45.0%
CCTGTAATATAGGCGAGTTC+CGG - chr6_1:81872103-81872122 Msa0895120:intron 45.0%
AAAACACCCCTGGTCAAATC+TGG - chr6_1:81872186-81872205 Msa0895120:intron 45.0%
GCGTGCCACATCATCAAAAA+AGG + chr6_1:81872246-81872265 None:intergenic 45.0%
! CTCTTCTCCTAGCTTTCTCT+TGG + chr6_1:81873434-81873453 None:intergenic 45.0%
AGAAAGCTAGGAGAAGAGCT+AGG - chr6_1:81873436-81873455 Msa0895120:three_prime_UTR 45.0%
TTGCTGAGATAAGGTAAGGG+TGG - chr6_1:81873491-81873510 Msa0895120:intron 45.0%
TGCTGAGATAAGGTAAGGGT+GGG - chr6_1:81873492-81873511 Msa0895120:intron 45.0%
!! GGGGTTTGGGTTGATGAAAT+TGG - chr6_1:81873723-81873742 Msa0895120:intron 45.0%
!!! GGGGTTTTTGGAGTGAAAAC+TGG - chr6_1:81873744-81873763 Msa0895120:intron 45.0%
CATCGTACTACGATGGAACA+TGG + chr6_1:81873789-81873808 None:intergenic 45.0%
TTCCATCGTAGTACGATGCT+GGG - chr6_1:81873791-81873810 Msa0895120:intron 45.0%
GGAATGCATCGTACTACGAT+GGG + chr6_1:81873866-81873885 None:intergenic 45.0%
TGGAATGCATCGTACTACGA+TGG + chr6_1:81873867-81873886 None:intergenic 45.0%
AGACGCAAGAACACGAAACA+GGG + chr6_1:81873920-81873939 None:intergenic 45.0%
AAGACGCAAGAACACGAAAC+AGG + chr6_1:81873921-81873940 None:intergenic 45.0%
!! CACCCGTTTCTGTTTTGAAC+TGG - chr6_1:81873944-81873963 Msa0895120:intron 45.0%
GGCCAGTTCAAAACAGAAAC+GGG + chr6_1:81873949-81873968 None:intergenic 45.0%
!! AAAATGGCCTTGGTTTGGAG+TGG - chr6_1:81874011-81874030 Msa0895120:intron 45.0%
GCATACTCATGTTCTGTTGG+GGG - chr6_1:81874432-81874451 Msa0895120:three_prime_UTR 45.0%
! TGGATGGTTAAAGCATCCCA+GGG + chr6_1:81874541-81874560 None:intergenic 45.0%
! TTGGATGGTTAAAGCATCCC+AGG + chr6_1:81874542-81874561 None:intergenic 45.0%
CGTTGAATGCTAAGCATTCC+AGG + chr6_1:81874583-81874602 None:intergenic 45.0%
CAACTAATGCATCATGCAGG+TGG + chr6_1:81874620-81874639 None:intergenic 45.0%
AGGCAACATATACGCAGAAG+GGG + chr6_1:81874901-81874920 None:intergenic 45.0%
GAGGCAACATATACGCAGAA+GGG + chr6_1:81874902-81874921 None:intergenic 45.0%
!! TGCAGGTACTGATGACTTGT+AGG - chr6_1:81874936-81874955 Msa0895120:three_prime_UTR 45.0%
! CTAGGGCTCTGATACATACT+AGG - chr6_1:81874977-81874996 Msa0895120:three_prime_UTR 45.0%
! GGCTCTGATACATACTAGGA+TGG - chr6_1:81874981-81875000 Msa0895120:three_prime_UTR 45.0%
ATTACGTTGTTGGGAGAACG+GGG - chr6_1:81875297-81875316 Msa0895120:intron 45.0%
!!! CGTCACCTTTTTTGATGACG+TGG + chr6_1:81875701-81875720 None:intergenic 45.0%
CGTCATCAAAAAAGGTGACG+TGG - chr6_1:81875701-81875720 Msa0895120:intron 45.0%
AAAACACCCCTGGTCAAATC+TGG + chr6_1:81872186-81872205 None:intergenic 45.0%
CCTGTAATATAGGCGAGTTC+CGG + chr6_1:81872103-81872122 None:intergenic 45.0%
CGGAACTCGCCTATATTACA+GGG - chr6_1:81875834-81875853 Msa0895120:intron 45.0%
GTAATAAACCCGAATCCTCG+AGG + chr6_1:81877083-81877102 None:intergenic 45.0%
TGTGGATAGATATGCGGTTG+TGG - chr6_1:81878142-81878161 Msa0895120:intron 45.0%
CTTATGTAGTTATGGGACGG+AGG - chr6_1:81878435-81878454 Msa0895120:intron 45.0%
GGTTAAGTGTGTGAAGACTC+TGG - chr6_1:81878519-81878538 Msa0895120:intron 45.0%
ATACCGGCACAATACTGACA+TGG + chr6_1:81879043-81879062 None:intergenic 45.0%
AAATGAACACCGGCGCATAT+CGG - chr6_1:81879065-81879084 Msa0895120:intron 45.0%
! GCACCGACACTTCAAATTGA+TGG + chr6_1:81879104-81879123 None:intergenic 45.0%
GGGTCTAATATGACATTGCG+TGG - chr6_1:81879302-81879321 Msa0895120:intron 45.0%
GCTCAGCAGTATGAGTTTGA+TGG - chr6_1:81879708-81879727 Msa0895120:intron 45.0%
AAATGCAGCACAAGCAAGTG+AGG - chr6_1:81879932-81879951 Msa0895120:intron 45.0%
AATGCAGCACAAGCAAGTGA+GGG - chr6_1:81879933-81879952 Msa0895120:intron 45.0%
AAGGGCAGAGATTGCAACTT+TGG - chr6_1:81880117-81880136 Msa0895120:intron 45.0%
AGGGCAGAGATTGCAACTTT+GGG - chr6_1:81880118-81880137 Msa0895120:intron 45.0%
! ACGGAAACAGCTCTGATAGT+TGG + chr6_1:81880211-81880230 None:intergenic 45.0%
! ACAACACGTTCTCTGGAAGA+AGG + chr6_1:81880240-81880259 None:intergenic 45.0%
!! GTTGGGCTTTGTTTGGTCTT+TGG - chr6_1:81880417-81880436 Msa0895120:intron 45.0%
TCAAAACACAGGGGAACATC+TGG + chr6_1:81881055-81881074 None:intergenic 45.0%
TTGGAGCTGAAACACAGAGA+TGG + chr6_1:81881079-81881098 None:intergenic 45.0%
! TTTCAGGCTTTGGCAGATGA+TGG - chr6_1:81881586-81881605 Msa0895120:intron 45.0%
!!! CAATTTTTTTAAAAAAATTT+CGG + chr6_1:81872498-81872517 None:intergenic 5.0%
!!! AAAAAAATCATATTTTTTTT+CGG - chr6_1:81872671-81872690 Msa0895120:three_prime_UTR 5.0%
!! AAAAAAAGATAAAAAAAATA+TGG - chr6_1:81872876-81872895 Msa0895120:intron 5.0%
!! AAAAATAATAGAATAAAAAT+GGG + chr6_1:81873113-81873132 None:intergenic 5.0%
!! TAAAAATAATAGAATAAAAA+TGG + chr6_1:81873114-81873133 None:intergenic 5.0%
!!! ATAATTTTATATGATTTATT+TGG - chr6_1:81873155-81873174 Msa0895120:intron 5.0%
!! GAATTATATATTATTATTAT+TGG - chr6_1:81874863-81874882 Msa0895120:three_prime_UTR 5.0%
!!! CAATTTTTTTAAAAAAAATT+CGG - chr6_1:81875507-81875526 Msa0895120:intron 5.0%
GTGAGAGAAACGGGAGAAGA+AGG - chr6_1:81870864-81870883 Msa0895120:three_prime_UTR 50.0%
GAGAGAAACGGGAGAAGAAG+GGG - chr6_1:81870866-81870885 Msa0895120:three_prime_UTR 50.0%
AGAGAAACGGGAGAAGAAGG+GGG - chr6_1:81870867-81870886 Msa0895120:three_prime_UTR 50.0%
GAAAGGGAGGAGAAAAACGG+CGG - chr6_1:81870906-81870925 Msa0895120:three_prime_UTR 50.0%
! CTCCGGTTGCTCTATTTCTC+AGG - chr6_1:81870935-81870954 Msa0895120:three_prime_UTR 50.0%
!! GAGACGATGGTGTTGATGCA+GGG + chr6_1:81871097-81871116 None:intergenic 50.0%
!! AGAGACGATGGTGTTGATGC+AGG + chr6_1:81871098-81871117 None:intergenic 50.0%
TATGGCTATGGGAGAGACGA+TGG + chr6_1:81871110-81871129 None:intergenic 50.0%
CTGGACATGAGCTATGGCTA+TGG + chr6_1:81871122-81871141 None:intergenic 50.0%
CATAGCCATAGCTCATGTCC+AGG - chr6_1:81871120-81871139 Msa0895120:three_prime_UTR 50.0%
TAAGGCGAAACCGGCGTTAT+TGG - chr6_1:81871493-81871512 Msa0895120:intron 50.0%
AGACGTGTAGTTGAAGCTGG+TGG - chr6_1:81871524-81871543 Msa0895120:intron 50.0%
CACTTTCCTGCCAAAAGGAG+CGG - chr6_1:81871679-81871698 Msa0895120:intron 50.0%
! AAATGTCCGCTCCTTTTGGC+AGG + chr6_1:81871688-81871707 None:intergenic 50.0%
TGCTCCACTTGAAGACTCCA+TGG - chr6_1:81871873-81871892 Msa0895120:intron 50.0%
CCGGAACTCGCCTATATTAC+AGG + chr6_1:81875833-81875852 None:intergenic 50.0%
!!! TTGACCAGGGGTGTTTTCGA+CGG + chr6_1:81875756-81875775 None:intergenic 50.0%
GTTCCATCGTAGTACGATGC+TGG - chr6_1:81873790-81873809 Msa0895120:intron 50.0%
TTCCCAGCATCGTACTACGA+TGG + chr6_1:81873796-81873815 None:intergenic 50.0%
GACGCAAGAACACGAAACAG+GGG + chr6_1:81873919-81873938 None:intergenic 50.0%
! TAAGCCCCCAACGATTTGGA+TGG + chr6_1:81874557-81874576 None:intergenic 50.0%
AGCATTCAACGCGCGTAGAT+TGG - chr6_1:81874592-81874611 Msa0895120:three_prime_UTR 50.0%
! TCGAGTTGTCAGTGTCGTTG+TGG - chr6_1:81874710-81874729 Msa0895120:three_prime_UTR 50.0%
CGAGGCAACATATACGCAGA+AGG + chr6_1:81874903-81874922 None:intergenic 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr6_1:81874908-81874927 Msa0895120:three_prime_UTR 50.0%
CAGTACCTGCACATTACCCA+CGG + chr6_1:81874927-81874946 None:intergenic 50.0%
! TTTGGTCGGCTCAAGTGTCT+AGG - chr6_1:81874959-81874978 Msa0895120:three_prime_UTR 50.0%
! TTGGTCGGCTCAAGTGTCTA+GGG - chr6_1:81874960-81874979 Msa0895120:three_prime_UTR 50.0%
GCGTGCCACGTCATCAAAAA+AGG - chr6_1:81875693-81875712 Msa0895120:intron 50.0%
!!! TTGACCAGGGGTGTTTTCGA+CGG - chr6_1:81875756-81875775 Msa0895120:intron 50.0%
CCGGAACTCGCCTATATTAC+AGG - chr6_1:81875833-81875852 Msa0895120:intron 50.0%
ACGATGAGAGAAATAGCGCG+TGG - chr6_1:81876839-81876858 Msa0895120:intron 50.0%
ATAGCGCGTGGAGTTGTTGA+TGG - chr6_1:81876851-81876870 Msa0895120:intron 50.0%
TGATTGATATGCCGTCCTCG+AGG - chr6_1:81877065-81877084 Msa0895120:intron 50.0%
ATATGCCGTCCTCGAGGATT+CGG - chr6_1:81877071-81877090 Msa0895120:intron 50.0%
TAAACCCGAATCCTCGAGGA+CGG + chr6_1:81877079-81877098 None:intergenic 50.0%
!! GGTGTTCGGCAGCTTGTTTT+GGG + chr6_1:81877596-81877615 None:intergenic 50.0%
!! AGGTGTTCGGCAGCTTGTTT+TGG + chr6_1:81877597-81877616 None:intergenic 50.0%
AAGCGACCCACCAACAAATC+CGG + chr6_1:81878725-81878744 None:intergenic 50.0%
!! GATTTGTTGGTGGGTCGCTT+GGG - chr6_1:81878725-81878744 Msa0895120:intron 50.0%
! GCCGGTATCGAAATGAACAC+CGG - chr6_1:81879055-81879074 Msa0895120:intron 50.0%
GCCGGTGTTCATTTCGATAC+CGG + chr6_1:81879059-81879078 None:intergenic 50.0%
TTTGAGTGTCCGATATGCGC+CGG + chr6_1:81879077-81879096 None:intergenic 50.0%
ACAACGACTTCGCTTGCTTG+AGG + chr6_1:81880734-81880753 None:intergenic 50.0%
CTGGATGTTGCAAACGGACA+AGG + chr6_1:81880763-81880782 None:intergenic 50.0%
TGAGGACTGCAGCTGCATTA+TGG - chr6_1:81881755-81881774 Msa0895120:intron 50.0%
AGAAGAAGGGGGAACGCGAA+CGG - chr6_1:81870878-81870897 Msa0895120:three_prime_UTR 55.0%
AACGCGAACGGGAACGGAAA+GGG - chr6_1:81870890-81870909 Msa0895120:three_prime_UTR 55.0%
GATTCCGTCGAAAACACCCC+TGG - chr6_1:81872176-81872195 Msa0895120:intron 55.0%
CGTGTGCCAGATTTGACCAG+GGG + chr6_1:81875744-81875763 None:intergenic 55.0%
GCGTGTGCCAGATTTGACCA+GGG + chr6_1:81875743-81875762 None:intergenic 55.0%
ATTGTTGGGGGCTTATGCCC+TGG - chr6_1:81874483-81874502 Msa0895120:three_prime_UTR 55.0%
GGCATAAGCCCCCAACGATT+TGG + chr6_1:81874561-81874580 None:intergenic 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr6_1:81874907-81874926 Msa0895120:three_prime_UTR 55.0%
GCGTGTGCCAGATTTGACCA+GGG - chr6_1:81875743-81875762 Msa0895120:intron 55.0%
CGTGTGCCAGATTTGACCAG+GGG - chr6_1:81875744-81875763 Msa0895120:intron 55.0%
GATTCCGTCGAAAACACCCC+TGG + chr6_1:81872176-81872195 None:intergenic 55.0%
TATGCCGTCCTCGAGGATTC+GGG - chr6_1:81877072-81877091 Msa0895120:intron 55.0%
!! GGATTTGTTGGTGGGTCGCT+TGG - chr6_1:81878724-81878743 Msa0895120:intron 55.0%
GAAGAAGGGGGAACGCGAAC+GGG - chr6_1:81870879-81870898 Msa0895120:three_prime_UTR 60.0%
GAACGCGAACGGGAACGGAA+AGG - chr6_1:81870889-81870908 Msa0895120:three_prime_UTR 60.0%
GGCGTGTGCCAGATTTGACC+AGG + chr6_1:81875742-81875761 None:intergenic 60.0%
GCACACGCCAGATGCTGATG+TGG - chr6_1:81872208-81872227 Msa0895120:intron 60.0%
TCTGTTGGGGGCTTATGCCC+TGG - chr6_1:81874444-81874463 Msa0895120:three_prime_UTR 60.0%
CTGTTGGGGGCTTATGCCCT+GGG - chr6_1:81874445-81874464 Msa0895120:three_prime_UTR 60.0%
ATCGTTGGGGGCTTATGCCC+TGG - chr6_1:81874562-81874581 Msa0895120:three_prime_UTR 60.0%
CTGCACATTACCCACGGTCG+AGG + chr6_1:81874921-81874940 None:intergenic 60.0%
CTCGACCGTGGGTAATGTGC+AGG - chr6_1:81874919-81874938 Msa0895120:three_prime_UTR 60.0%
GGTCAAATCTGGCACACGCC+AGG + chr6_1:81872197-81872216 None:intergenic 60.0%
GGCGTGTGCCAGATTTGACC+AGG - chr6_1:81875742-81875761 Msa0895120:intron 60.0%
AGGGGGAACGCGAACGGGAA+CGG - chr6_1:81870884-81870903 Msa0895120:three_prime_UTR 65.0%
GCGAACGGGAACGGAAAGGG+AGG - chr6_1:81870893-81870912 Msa0895120:three_prime_UTR 65.0%
!! AAAAACGGCGGCGCCGACTC+CGG - chr6_1:81870918-81870937 Msa0895120:three_prime_UTR 65.0%
TGGCGCGCCACATCAGCATC+TGG + chr6_1:81872218-81872237 None:intergenic 65.0%
CCAGGGCATAAGCCCCCAAC+AGG + chr6_1:81874447-81874466 None:intergenic 65.0%
CCTGTTGGGGGCTTATGCCC+TGG - chr6_1:81874521-81874540 Msa0895120:three_prime_UTR 65.0%
!! GCACACGCCAGGTGCTGATG+TGG + chr6_1:81875731-81875750 None:intergenic 65.0%
TGGCGCGCCACATCAGCACC+TGG - chr6_1:81875721-81875740 Msa0895120:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 81870858 81881901 81870858 ID=Msa0895120;Name=Msa0895120
chr6_1 mRNA 81870858 81881901 81870858 ID=Msa0895120-mRNA-1;Parent=Msa0895120;Name=Msa0895120-mRNA-1;_AED=0.12;_eAED=0.12;_QI=167|0.8|0.72|1|0.4|0.54|11|1750|142
chr6_1 exon 81870858 81871167 81870858 ID=Msa0895120-mRNA-1:exon:13894;Parent=Msa0895120-mRNA-1
chr6_1 exon 81872485 81872883 81872485 ID=Msa0895120-mRNA-1:exon:13893;Parent=Msa0895120-mRNA-1
chr6_1 exon 81873355 81873456 81873355 ID=Msa0895120-mRNA-1:exon:13892;Parent=Msa0895120-mRNA-1
chr6_1 exon 81874170 81875200 81874170 ID=Msa0895120-mRNA-1:exon:13891;Parent=Msa0895120-mRNA-1
chr6_1 exon 81875378 81875477 81875378 ID=Msa0895120-mRNA-1:exon:13890;Parent=Msa0895120-mRNA-1
chr6_1 exon 81875593 81875619 81875593 ID=Msa0895120-mRNA-1:exon:13889;Parent=Msa0895120-mRNA-1
chr6_1 exon 81875873 81875946 81875873 ID=Msa0895120-mRNA-1:exon:13888;Parent=Msa0895120-mRNA-1
chr6_1 exon 81880854 81880893 81880854 ID=Msa0895120-mRNA-1:exon:13887;Parent=Msa0895120-mRNA-1
chr6_1 exon 81881230 81881317 81881230 ID=Msa0895120-mRNA-1:exon:13886;Parent=Msa0895120-mRNA-1
chr6_1 exon 81881618 81881693 81881618 ID=Msa0895120-mRNA-1:exon:13885;Parent=Msa0895120-mRNA-1
chr6_1 exon 81881803 81881901 81881803 ID=Msa0895120-mRNA-1:exon:13884;Parent=Msa0895120-mRNA-1
chr6_1 five_prime_UTR 81881803 81881901 81881803 ID=Msa0895120-mRNA-1:five_prime_utr;Parent=Msa0895120-mRNA-1
chr6_1 five_prime_UTR 81881626 81881693 81881626 ID=Msa0895120-mRNA-1:five_prime_utr;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81881618 81881625 81881618 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81881230 81881317 81881230 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81880854 81880893 81880854 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81875873 81875946 81875873 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81875593 81875619 81875593 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81875378 81875477 81875378 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 CDS 81875109 81875200 81875109 ID=Msa0895120-mRNA-1:cds;Parent=Msa0895120-mRNA-1
chr6_1 three_prime_UTR 81874170 81875108 81874170 ID=Msa0895120-mRNA-1:three_prime_utr;Parent=Msa0895120-mRNA-1
chr6_1 three_prime_UTR 81873355 81873456 81873355 ID=Msa0895120-mRNA-1:three_prime_utr;Parent=Msa0895120-mRNA-1
chr6_1 three_prime_UTR 81872485 81872883 81872485 ID=Msa0895120-mRNA-1:three_prime_utr;Parent=Msa0895120-mRNA-1
chr6_1 three_prime_UTR 81870858 81871167 81870858 ID=Msa0895120-mRNA-1:three_prime_utr;Parent=Msa0895120-mRNA-1
Gene Sequence

>Msa0895120

ATGTCCAGATTAGCGAAATTCTTACCGAAGTTCCAGAAGCTTCTTAAGCGTGAAGTGTTTAAGGCGAAACCGGCGTTATTGGCGTTGATAAGACGTGGGTATGTGCTCCACTTGAAGACTCCATGGTTTCTAACAGATGACCAGCAAGTTCACTCCATAATGACGATGAGAGAAATAGCGCGTGGAGTTGTTGATGGTCGAGATAGAAAGGAGAATCACATCATCAATGACAAGAAGGTTGAAACCAAGAGGACTATTACAAAGGGTGCATCTCAAACTAATGACTTTAAAACTAAGAAGATTTTTGTTGGTGGCATTCCAGCAACTGTATCTGAAGATGAGCTCAAGAACTTCTTCTCAAAGTATGGGGACCCAAAACAAGCTGCCGAACACCTTCCTGTAATTAGAAATGAGAACAAGTCGACATGA

Protein sequence

>Msa0895120

MSRLAKFLPKFQKLLKREVFKAKPALLALIRRGYVLHLKTPWFLTDDQQVHSIMTMREIARGVVDGRDRKENHIINDKKVETKRTITKGASQTNDFKTKKIFVGGIPATVSEDELKNFFSKYGDPKQAAEHLPVIRNENKST*