Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418070 | XP_022754926.1 | 81.061 | 132 | 14 | 1 | 163 | 283 | 87 | 218 | 2.19e-58 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418070 | sp|Q9SZE4|VP322_ARATH | 75.940 | 133 | 20 | 2 | 163 | 283 | 87 | 219 | 7.45e-51 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418070 | I3SEH2 | 84.848 | 132 | 9 | 1 | 163 | 283 | 89 | 220 | 1.64e-58 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026690 | Msa0418070 | 0.816275 | 6.013733e-52 | -8.615850e-47 |
| Msa0087390 | Msa0418070 | 0.900100 | 1.026447e-77 | -8.615850e-47 |
| Msa0418070 | Msa0778490 | 0.840136 | 1.042655e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418070 | MtrunA17_Chr6g0487521 | 84.848 | 132 | 9 | 1 | 163 | 283 | 89 | 220 | 3.16e-62 | 196 |
| Msa0418070 | MtrunA17_Chr8g0389481 | 72.727 | 132 | 23 | 3 | 163 | 283 | 93 | 222 | 1.16e-44 | 150 |
| Msa0418070 | MtrunA17_Chr8g0389471 | 67.939 | 131 | 32 | 1 | 163 | 283 | 91 | 221 | 2.87e-42 | 144 |
| Msa0418070 | MtrunA17_Chr7g0255781 | 94.444 | 72 | 4 | 0 | 90 | 161 | 169 | 240 | 1.34e-36 | 135 |
| Msa0418070 | MtrunA17_Chr5g0441311 | 59.722 | 72 | 29 | 0 | 90 | 161 | 179 | 250 | 1.43e-19 | 88.2 |
| Msa0418070 | MtrunA17_Chr3g0093711 | 56.944 | 72 | 31 | 0 | 90 | 161 | 164 | 235 | 8.28e-18 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418070 | AT4G29160.2 | 75.940 | 133 | 20 | 2 | 163 | 283 | 60 | 192 | 3.03e-52 | 169 |
| Msa0418070 | AT4G29160.1 | 75.940 | 133 | 20 | 2 | 163 | 283 | 87 | 219 | 7.57e-52 | 169 |
| Msa0418070 | AT4G29160.3 | 75.940 | 133 | 20 | 2 | 163 | 283 | 87 | 219 | 7.57e-52 | 169 |
| Msa0418070 | AT2G19830.1 | 71.212 | 132 | 21 | 3 | 163 | 283 | 69 | 194 | 2.49e-50 | 164 |
| Msa0418070 | AT2G19830.2 | 71.212 | 132 | 21 | 3 | 163 | 283 | 88 | 213 | 4.17e-50 | 164 |
| Msa0418070 | AT3G56480.1 | 67.568 | 74 | 22 | 1 | 90 | 161 | 168 | 241 | 4.01e-24 | 101 |
| Msa0418070 | AT2G40820.5 | 68.919 | 74 | 21 | 1 | 90 | 161 | 61 | 134 | 2.08e-23 | 98.6 |
| Msa0418070 | AT2G40820.3 | 68.919 | 74 | 21 | 1 | 90 | 161 | 183 | 256 | 6.03e-23 | 98.6 |
| Msa0418070 | AT2G40820.4 | 68.919 | 74 | 21 | 1 | 90 | 161 | 196 | 269 | 6.33e-23 | 98.6 |
| Msa0418070 | AT2G40820.2 | 68.919 | 74 | 21 | 1 | 90 | 161 | 171 | 244 | 7.10e-23 | 98.2 |
| Msa0418070 | AT2G40820.1 | 68.919 | 74 | 21 | 1 | 90 | 161 | 171 | 244 | 7.10e-23 | 98.2 |
| Msa0418070 | AT2G26770.2 | 61.111 | 72 | 28 | 0 | 90 | 161 | 168 | 239 | 1.76e-19 | 88.2 |
| Msa0418070 | AT2G26770.3 | 61.111 | 72 | 28 | 0 | 90 | 161 | 168 | 239 | 1.76e-19 | 88.2 |
| Msa0418070 | AT2G26770.1 | 61.111 | 72 | 28 | 0 | 90 | 161 | 168 | 239 | 1.76e-19 | 88.2 |
Find 64 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCATGCATGTTGGTTTC+TGG | 0.193122 | 3_2:-65720028 | Msa0418070:CDS |
| TCCTCAGGAGTCGGCTTTGC+AGG | 0.229972 | 3_2:+65713207 | None:intergenic |
| TTGGTTTCTGGTGTTGATTT+TGG | 0.301252 | 3_2:-65720016 | Msa0418070:CDS |
| AGAGCAGTGGTGCTGGGAAT+TGG | 0.301411 | 3_2:-65717330 | Msa0418070:CDS |
| CCCACAGTGCATGTCTCAGC+TGG | 0.318746 | 3_2:-65713252 | Msa0418070:CDS |
| GAGCAGTGGTGCTGGGAATT+GGG | 0.318997 | 3_2:-65717329 | Msa0418070:CDS |
| ATGCAGCAATCTGATTCTTC+TGG | 0.325783 | 3_2:+65717007 | None:intergenic |
| AGGCTTCTGAAGATGCTAAA+AGG | 0.361461 | 3_2:-65717401 | Msa0418070:CDS |
| TGCTCTAGCACTCTCGATTT+CGG | 0.373790 | 3_2:+65717347 | None:intergenic |
| AGATGAATTGGCAGCTCTGC+AGG | 0.394946 | 3_2:-65713184 | Msa0418070:CDS |
| AATTTCCCTTCTTCCTCCAT+TGG | 0.397748 | 3_2:+65720189 | None:intergenic |
| ATTAAGCAATGTACCTTACT+TGG | 0.401978 | 3_2:+65716981 | None:intergenic |
| GACTCCTGAGGAAGATGAAT+TGG | 0.412289 | 3_2:-65713196 | Msa0418070:CDS |
| AAATAAGCAGCTGCACCAAT+TGG | 0.420089 | 3_2:+65713790 | None:intergenic |
| ACAGTAGATGCGTTAAGAAC+AGG | 0.444660 | 3_2:-65714033 | Msa0418070:CDS |
| GAGTGCTAGAGCAGTGGTGC+TGG | 0.451158 | 3_2:-65717337 | Msa0418070:CDS |
| TAATAGATGATAATGTTAGA+AGG | 0.453601 | 3_2:-65714075 | Msa0418070:intron |
| CAGAATTTGAGGGAGGGGAG+TGG | 0.461437 | 3_2:-65717915 | Msa0418070:intron |
| TACACAAGCTTCTAAACCAC+AGG | 0.464474 | 3_2:-65717280 | Msa0418070:intron |
| GGCAGCTCTGCAGGCTGAGA+TGG | 0.469864 | 3_2:-65713175 | Msa0418070:CDS |
| TTTGGTTCAATATGGTAATG+AGG | 0.482030 | 3_2:-65719998 | Msa0418070:CDS |
| GGAGTCGGCTTTGCAGGAAC+AGG | 0.488105 | 3_2:+65713213 | None:intergenic |
| TTTGCAGGAACAGGACGTGC+AGG | 0.493724 | 3_2:+65713222 | None:intergenic |
| TTAGGTGATATAGGTACAAA+GGG | 0.501738 | 3_2:-65717580 | Msa0418070:intron |
| AAGAAGCCAATGGAGGAAGA+AGG | 0.503945 | 3_2:-65720195 | None:intergenic |
| TTCTGAAGATGCTAAAAGGT+TGG | 0.504212 | 3_2:-65717397 | Msa0418070:CDS |
| CCAGCTGAGACATGCACTGT+GGG | 0.507614 | 3_2:+65713252 | None:intergenic |
| CTGTCAGGATGTGGATGGAC+TGG | 0.508897 | 3_2:-65717048 | Msa0418070:intron |
| GAGACATGCACTGTGGGAGC+AGG | 0.513136 | 3_2:+65713258 | None:intergenic |
| GAAGCATTGTCAGCTCCAAT+TGG | 0.513583 | 3_2:-65713805 | Msa0418070:CDS |
| AGAATTGGAGAATGCTGAGT+TGG | 0.518601 | 3_2:-65713313 | Msa0418070:intron |
| CTGTTCATTTATCTCGTCCA+TGG | 0.520922 | 3_2:+65713852 | None:intergenic |
| AGCAGTGGTGCTGGGAATTG+GGG | 0.521566 | 3_2:-65717328 | Msa0418070:CDS |
| ATTGCTGCATCAGCCAAGTA+AGG | 0.523393 | 3_2:-65716994 | Msa0418070:intron |
| TCTTACTGTCAGGATGTGGA+TGG | 0.524962 | 3_2:-65717053 | Msa0418070:intron |
| TTTAGGTGATATAGGTACAA+AGG | 0.525708 | 3_2:-65717581 | Msa0418070:intron |
| CCACAGTGCATGTCTCAGCT+GGG | 0.525773 | 3_2:-65713251 | Msa0418070:CDS |
| GCTGCCAATTCATCTTCCTC+AGG | 0.526016 | 3_2:+65713192 | None:intergenic |
| CGCATCTACTGTTTCCGTGG+TGG | 0.528888 | 3_2:+65714044 | None:intergenic |
| AACAGGAGCAACTACTATGA+AGG | 0.534991 | 3_2:-65714016 | Msa0418070:CDS |
| TGTGGATGGACTGGTGGAAG+AGG | 0.543368 | 3_2:-65717039 | Msa0418070:CDS |
| AATTCATCTTCCTCAGGAGT+CGG | 0.548839 | 3_2:+65713198 | None:intergenic |
| CAATATGGTAATGAGGAACA+AGG | 0.557967 | 3_2:-65719991 | Msa0418070:CDS |
| TAACGCATCTACTGTTTCCG+TGG | 0.562190 | 3_2:+65714041 | None:intergenic |
| ATCTAGAATCTCATGCATGT+TGG | 0.566933 | 3_2:-65720035 | Msa0418070:CDS |
| GTCTAAACAATCTGAACCAA+AGG | 0.568231 | 3_2:-65717510 | Msa0418070:intron |
| AGTGCTAGAGCAGTGGTGCT+GGG | 0.572493 | 3_2:-65717336 | Msa0418070:CDS |
| AGGTACAAAGGGAATGATGA+TGG | 0.572701 | 3_2:-65717569 | Msa0418070:CDS |
| AGAAGCCAATGGAGGAAGAA+GGG | 0.574601 | 3_2:-65720194 | None:intergenic |
| TGAGAAGGAGAAATTTGAAG+AGG | 0.591853 | 3_2:-65717871 | Msa0418070:intron |
| GATGGTACTGATCAAGTTAG+TGG | 0.592941 | 3_2:-65717551 | Msa0418070:CDS |
| TCCTGCAAAGCCGACTCCTG+AGG | 0.597589 | 3_2:-65713208 | Msa0418070:CDS |
| AAATCATGTGCAAAATGAGA+AGG | 0.599565 | 3_2:-65717886 | Msa0418070:CDS |
| AGGGAAATTACTAACATGCA+AGG | 0.607987 | 3_2:-65720175 | Msa0418070:CDS |
| TCAGGATGTGGATGGACTGG+TGG | 0.623988 | 3_2:-65717045 | Msa0418070:intron |
| AGTGGTGCTGGGAATTGGGG+AGG | 0.632259 | 3_2:-65717325 | Msa0418070:CDS |
| CCCAGCTGAGACATGCACTG+TGG | 0.640471 | 3_2:+65713251 | None:intergenic |
| ACTGGTGGAAGAGGTTCAAG+AGG | 0.647608 | 3_2:-65717030 | Msa0418070:CDS |
| TGATGATGTCGACAAGACCA+TGG | 0.653403 | 3_2:-65713869 | Msa0418070:CDS |
| AATCGAGAGTGCTAGAGCAG+TGG | 0.666858 | 3_2:-65717343 | Msa0418070:CDS |
| GGAGCAGGAGCTGTAAATGT+TGG | 0.671498 | 3_2:+65713273 | None:intergenic |
| AATATGGTAATGAGGAACAA+GGG | 0.673181 | 3_2:-65719990 | Msa0418070:CDS |
| CAGTGCATGTCTCAGCTGGG+AGG | 0.674111 | 3_2:-65713248 | Msa0418070:CDS |
| AGAAGGTGCTAAAGCCACCA+CGG | 0.700426 | 3_2:-65714058 | Msa0418070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATGTAAAAAATAAAT+GGG | - | chr3_2:65713873-65713892 | Msa0418070:CDS | 10.0% |
| !! | AAATAAAAAATAAAAACTTG+AGG | - | chr3_2:65714882-65714901 | Msa0418070:intron | 10.0% |
| !! | AATAAAAAATAAAAACTTGA+GGG | - | chr3_2:65714883-65714902 | Msa0418070:intron | 10.0% |
| !! | AAATATGTTAATTTCATATT+TGG | - | chr3_2:65715100-65715119 | Msa0418070:intron | 10.0% |
| !!! | AAATTATTTTTTGAACAAAA+TGG | + | chr3_2:65718825-65718844 | None:intergenic | 10.0% |
| !! | TTGAAATAATAACATTAAAA+AGG | - | chr3_2:65719835-65719854 | Msa0418070:intron | 10.0% |
| !! | TGAAATAATAACATTAAAAA+GGG | - | chr3_2:65719836-65719855 | Msa0418070:intron | 10.0% |
| !!! | TTGATATTGAATTATTTTCT+GGG | - | chr3_2:65713441-65713460 | Msa0418070:intron | 15.0% |
| !! | GAATTGATGTAAAAAATAAA+TGG | - | chr3_2:65713872-65713891 | Msa0418070:CDS | 15.0% |
| !!! | ATATAATTTGTTTTGAAGTT+TGG | - | chr3_2:65714655-65714674 | Msa0418070:intron | 15.0% |
| !!! | GATGTATCATTTTTTTAAAA+TGG | - | chr3_2:65715152-65715171 | Msa0418070:intron | 15.0% |
| !!! | AATATTGGGAATTTATTTTA+AGG | + | chr3_2:65715258-65715277 | None:intergenic | 15.0% |
| !!! | TTATTTTCTGTTACTTTAAA+AGG | - | chr3_2:65715532-65715551 | Msa0418070:intron | 15.0% |
| !! | TTTCATTTATATATTCACAT+TGG | - | chr3_2:65716441-65716460 | Msa0418070:intron | 15.0% |
| !!! | ATTTTTTTACTTGATGATTT+TGG | - | chr3_2:65718446-65718465 | Msa0418070:intron | 15.0% |
| !!! | CTTTTCATTAAATTTTGTTT+TGG | - | chr3_2:65719789-65719808 | Msa0418070:intron | 15.0% |
| !!! | CTTGATATTGAATTATTTTC+TGG | - | chr3_2:65713440-65713459 | Msa0418070:intron | 20.0% |
| !!! | ATGTAAAAAATAAATGGGTT+GGG | - | chr3_2:65713878-65713897 | Msa0418070:CDS | 20.0% |
| !! | ATCAAAACAACTTATATTCA+TGG | + | chr3_2:65714574-65714593 | None:intergenic | 20.0% |
| !! | TTTCAACTTAATGAATTTAG+TGG | + | chr3_2:65714820-65714839 | None:intergenic | 20.0% |
| !!! | CAAATAGGTATTTTCTATAA+AGG | - | chr3_2:65714967-65714986 | Msa0418070:intron | 20.0% |
| !! | CATCATAAAAGCTAAAATAT+AGG | + | chr3_2:65715136-65715155 | None:intergenic | 20.0% |
| !!! | TAAAATGGTTTTTGAAGAAT+TGG | - | chr3_2:65715167-65715186 | Msa0418070:intron | 20.0% |
| !!! | GTTTCTATAGTTATCTTTTT+TGG | - | chr3_2:65715399-65715418 | Msa0418070:intron | 20.0% |
| !!! | ATTTCTTTTTTCAGAATTTG+AGG | - | chr3_2:65715427-65715446 | Msa0418070:intron | 20.0% |
| !!! | TTTCTTTTTTCAGAATTTGA+GGG | - | chr3_2:65715428-65715447 | Msa0418070:intron | 20.0% |
| !! | TATAAACTTAAAAATCAGGA+GGG | + | chr3_2:65715669-65715688 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGCAACTTGATA+TGG | - | chr3_2:65715710-65715729 | Msa0418070:intron | 20.0% |
| !! | TTGTAGATAACAATAACAAA+TGG | + | chr3_2:65716409-65716428 | None:intergenic | 20.0% |
| !! | TGAATATATAAATGAAAGAG+AGG | + | chr3_2:65716438-65716457 | None:intergenic | 20.0% |
| !!! | TCTTTTATATCTTCATTACT+TGG | - | chr3_2:65716544-65716563 | Msa0418070:intron | 20.0% |
| !! | GAACAAAAATATAGATCATA+TGG | + | chr3_2:65717048-65717067 | None:intergenic | 20.0% |
| !! | ATATATGTTGAACTTTATGT+GGG | - | chr3_2:65717206-65717225 | Msa0418070:intron | 20.0% |
| !!! | ATTTGTCTTATTTTTGTGTT+TGG | - | chr3_2:65717585-65717604 | Msa0418070:intron | 20.0% |
| !! | AAAATAACCAACGATATTAT+TGG | + | chr3_2:65717756-65717775 | None:intergenic | 20.0% |
| !!! | GTTATGGTAATTTGATTTTA+GGG | - | chr3_2:65717797-65717816 | Msa0418070:intron | 20.0% |
| !! | TAAAATTGATACAATGTTGT+TGG | - | chr3_2:65718003-65718022 | Msa0418070:intron | 20.0% |
| !! | TTGTTTCACAAATTAAAAAC+AGG | + | chr3_2:65718142-65718161 | None:intergenic | 20.0% |
| !! | TATTCACCAGATTAATATTT+GGG | - | chr3_2:65718292-65718311 | Msa0418070:intron | 20.0% |
| !! | AATTTAAATCACCTGTTATT+GGG | + | chr3_2:65718609-65718628 | None:intergenic | 20.0% |
| !! | TAATTTAAATCACCTGTTAT+TGG | + | chr3_2:65718610-65718629 | None:intergenic | 20.0% |
| !! | ACTATAAAATTCTATATACC+AGG | - | chr3_2:65718993-65719012 | Msa0418070:intron | 20.0% |
| !!! | TAATAGATGATAATGTTAGA+AGG | - | chr3_2:65719278-65719297 | Msa0418070:intron | 20.0% |
| !! | GTGATATATTTAATTGAGTT+TGG | - | chr3_2:65719437-65719456 | Msa0418070:intron | 20.0% |
| !!! | TTTTTGCTTTTAATTAAGTC+CGG | + | chr3_2:65719675-65719694 | None:intergenic | 20.0% |
| ! | TGTTCATCACAACAAATATT+AGG | - | chr3_2:65713531-65713550 | Msa0418070:intron | 25.0% |
| !!! | TTTTGTGATTTTGATTGTGT+AGG | - | chr3_2:65713623-65713642 | Msa0418070:intron | 25.0% |
| ! | ATTAGTGTAAGTGTAATCAT+GGG | - | chr3_2:65713672-65713691 | Msa0418070:intron | 25.0% |
| ! | GATGTAAAAAATAAATGGGT+TGG | - | chr3_2:65713877-65713896 | Msa0418070:CDS | 25.0% |
| !!! | TGAATTGATGTTTTAGTGTT+TGG | - | chr3_2:65714029-65714048 | Msa0418070:CDS | 25.0% |
| !!! | GAATTGATGTTTTAGTGTTT+GGG | - | chr3_2:65714030-65714049 | Msa0418070:CDS | 25.0% |
| ! | TGGTAACTTAAATATAGCAT+TGG | + | chr3_2:65714163-65714182 | None:intergenic | 25.0% |
| !! | GTGAACTGATAAACTATTTT+GGG | - | chr3_2:65714195-65714214 | Msa0418070:intron | 25.0% |
| !!! | AAGTTGATAGAAAGTGATTA+TGG | - | chr3_2:65714258-65714277 | Msa0418070:intron | 25.0% |
| ! | GAAGTGGATAAAATGTAATT+AGG | - | chr3_2:65714299-65714318 | Msa0418070:intron | 25.0% |
| !!! | TAGGTATTTTTAAGTTGCTA+AGG | - | chr3_2:65714621-65714640 | Msa0418070:intron | 25.0% |
| ! | AAAAATAAAAACTTGAGGGT+AGG | - | chr3_2:65714887-65714906 | Msa0418070:intron | 25.0% |
| ! | ATGCAAGTAGCAAAATTTAT+AGG | - | chr3_2:65714998-65715017 | Msa0418070:intron | 25.0% |
| ! | TGCAAGTAGCAAAATTTATA+GGG | - | chr3_2:65714999-65715018 | Msa0418070:intron | 25.0% |
| ! | CATAGAAAGACTTTCTTTAT+TGG | + | chr3_2:65715296-65715315 | None:intergenic | 25.0% |
| ! | ACATAATTGAATTCACACAA+GGG | + | chr3_2:65715338-65715357 | None:intergenic | 25.0% |
| ! | TTCAATTATGTCCTTTGATT+TGG | - | chr3_2:65715347-65715366 | Msa0418070:intron | 25.0% |
| !!! | CTATAGTTATCTTTTTTGGT+AGG | - | chr3_2:65715403-65715422 | Msa0418070:intron | 25.0% |
| ! | ATTTGAAGAGGTAATTCTTA+TGG | - | chr3_2:65715494-65715513 | Msa0418070:intron | 25.0% |
| ! | CTATAAACTTAAAAATCAGG+AGG | + | chr3_2:65715670-65715689 | None:intergenic | 25.0% |
| ! | CAGCTATAAACTTAAAAATC+AGG | + | chr3_2:65715673-65715692 | None:intergenic | 25.0% |
| !! | CAAGCTTAAGTTGTTAATTT+GGG | - | chr3_2:65715733-65715752 | Msa0418070:intron | 25.0% |
| !!! | GTTACTTTGTATTGTGTTTT+AGG | - | chr3_2:65715755-65715774 | Msa0418070:intron | 25.0% |
| !!! | TATTGTGTTTTAGGTGATAT+AGG | - | chr3_2:65715764-65715783 | Msa0418070:intron | 25.0% |
| !!! | TGATTCCATTTTTGTTCTAT+AGG | - | chr3_2:65715932-65715951 | Msa0418070:intron | 25.0% |
| ! | CTAGCAGTGAAAAATAAATA+TGG | - | chr3_2:65716615-65716634 | Msa0418070:intron | 25.0% |
| ! | ATCATCATCAAAACTGTTAA+TGG | - | chr3_2:65716706-65716725 | Msa0418070:intron | 25.0% |
| !!! | ATATTTTTGTTCTTCCGAAA+AGG | - | chr3_2:65717056-65717075 | Msa0418070:intron | 25.0% |
| ! | CATATATGTTGAACTTTATG+TGG | - | chr3_2:65717205-65717224 | Msa0418070:intron | 25.0% |
| ! | ATGTAAATATTACTGTTTGC+AGG | - | chr3_2:65717307-65717326 | Msa0418070:CDS | 25.0% |
| ! | TTTATGCAGTTATCTATTCA+AGG | - | chr3_2:65717351-65717370 | Msa0418070:CDS | 25.0% |
| !!! | AAATGCAAATTGTGTTGTTT+TGG | - | chr3_2:65717537-65717556 | Msa0418070:CDS | 25.0% |
| ! | GTATTCACTCTTAATATCAT+TGG | + | chr3_2:65717700-65717719 | None:intergenic | 25.0% |
| ! | TGATATTAAGAGTGAATACT+TGG | - | chr3_2:65717701-65717720 | Msa0418070:intron | 25.0% |
| ! | AAGAAAACCAATAATATCGT+TGG | - | chr3_2:65717746-65717765 | Msa0418070:intron | 25.0% |
| !!! | ATATCGTTGGTTATTTTTTG+AGG | - | chr3_2:65717759-65717778 | Msa0418070:intron | 25.0% |
| !!! | TATCGTTGGTTATTTTTTGA+GGG | - | chr3_2:65717760-65717779 | Msa0418070:intron | 25.0% |
| ! | TTTGAGGGAAATAATATTGT+TGG | - | chr3_2:65717775-65717794 | Msa0418070:intron | 25.0% |
| !! | GGAAATAATATTGTTGGTTA+TGG | - | chr3_2:65717781-65717800 | Msa0418070:intron | 25.0% |
| !!! | GGTTATGGTAATTTGATTTT+AGG | - | chr3_2:65717796-65717815 | Msa0418070:intron | 25.0% |
| !! | TTTTACGTGTCTTCAAATTT+AGG | - | chr3_2:65717888-65717907 | Msa0418070:CDS | 25.0% |
| ! | AAATCAAAACAGAAGTGATA+AGG | + | chr3_2:65718059-65718078 | None:intergenic | 25.0% |
| ! | TGTGAAACAATTCATAGATT+AGG | - | chr3_2:65718152-65718171 | Msa0418070:intron | 25.0% |
| ! | GTATTCACCAGATTAATATT+TGG | - | chr3_2:65718291-65718310 | Msa0418070:intron | 25.0% |
| ! | ATTCACCAGATTAATATTTG+GGG | - | chr3_2:65718293-65718312 | Msa0418070:intron | 25.0% |
| ! | ATCTATTCCCTTAATTAATG+AGG | - | chr3_2:65718349-65718368 | Msa0418070:intron | 25.0% |
| !!! | CATTTTGATTAAAAGCTGAA+AGG | + | chr3_2:65718567-65718586 | None:intergenic | 25.0% |
| ! | GTATTACTTACTTTAGACAA+TGG | - | chr3_2:65719210-65719229 | Msa0418070:intron | 25.0% |
| !! | ATCAAATATCCTGTTTTCAA+CGG | + | chr3_2:65719630-65719649 | None:intergenic | 25.0% |
| !! | TACGTCAAAAAAGTATAATG+TGG | + | chr3_2:65719733-65719752 | None:intergenic | 25.0% |
| TTGGGGTTTATTTCAGAAAT+TGG | - | chr3_2:65713295-65713314 | Msa0418070:CDS | 30.0% | |
| !!! | GTGTTGATTTTGGTTCAATA+TGG | - | chr3_2:65713347-65713366 | Msa0418070:intron | 30.0% |
| ! | TTTGGTTCAATATGGTAATG+AGG | - | chr3_2:65713355-65713374 | Msa0418070:intron | 30.0% |
| ! | AATATGGTAATGAGGAACAA+GGG | - | chr3_2:65713363-65713382 | Msa0418070:intron | 30.0% |
| ACTTGCATGTGATTTATGTT+TGG | - | chr3_2:65713481-65713500 | Msa0418070:intron | 30.0% | |
| CTTGCATGTGATTTATGTTT+GGG | - | chr3_2:65713482-65713501 | Msa0418070:intron | 30.0% | |
| TTGCATGTGATTTATGTTTG+GGG | - | chr3_2:65713483-65713502 | Msa0418070:intron | 30.0% | |
| TTGATTGTGTAGGTATGAAA+AGG | - | chr3_2:65713633-65713652 | Msa0418070:intron | 30.0% | |
| TGATTGTGTAGGTATGAAAA+GGG | - | chr3_2:65713634-65713653 | Msa0418070:intron | 30.0% | |
| CATTAGTGTAAGTGTAATCA+TGG | - | chr3_2:65713671-65713690 | Msa0418070:intron | 30.0% | |
| GTAATCATGGGATCTTAATA+CGG | - | chr3_2:65713684-65713703 | Msa0418070:intron | 30.0% | |
| ATAGAAAGAAGAAGGAAGAA+GGG | - | chr3_2:65713725-65713744 | Msa0418070:intron | 30.0% | |
| CTACTTTCTAAACAATCTGA+TGG | + | chr3_2:65713984-65714003 | None:intergenic | 30.0% | |
| !! | CTGTCAATTAAGTTGTTTTG+CGG | - | chr3_2:65714082-65714101 | Msa0418070:intron | 30.0% |
| AATACAAGTTGTTGTAGGTA+TGG | - | chr3_2:65714118-65714137 | Msa0418070:intron | 30.0% | |
| TAAGTTACCATATGAGTAGT+TGG | - | chr3_2:65714173-65714192 | Msa0418070:intron | 30.0% | |
| ! | GGTGAACTGATAAACTATTT+TGG | - | chr3_2:65714194-65714213 | Msa0418070:intron | 30.0% |
| TTGATAGAAAGTGATTATGG+AGG | - | chr3_2:65714261-65714280 | Msa0418070:intron | 30.0% | |
| AAAGTGATTATGGAGGATTA+GGG | - | chr3_2:65714268-65714287 | Msa0418070:intron | 30.0% | |
| ! | TCAAGTGATTTTTGATGCTA+TGG | - | chr3_2:65714437-65714456 | Msa0418070:intron | 30.0% |
| ! | ATGGTTAGCTAACAAAATTC+CGG | - | chr3_2:65714456-65714475 | Msa0418070:intron | 30.0% |
| !!! | TCTGTAGATGATTTTGAAGT+TGG | - | chr3_2:65714522-65714541 | Msa0418070:intron | 30.0% |
| !!! | CTGTAGATGATTTTGAAGTT+GGG | - | chr3_2:65714523-65714542 | Msa0418070:intron | 30.0% |
| !!! | TGTAGATGATTTTGAAGTTG+GGG | - | chr3_2:65714524-65714543 | Msa0418070:intron | 30.0% |
| !!! | TGTTTTGATGTGCTAAAGTT+TGG | - | chr3_2:65714585-65714604 | Msa0418070:intron | 30.0% |
| GTTTGGTATCACTTAACAAT+AGG | - | chr3_2:65714602-65714621 | Msa0418070:intron | 30.0% | |
| ATCTTGATATACATCATGCT+AGG | + | chr3_2:65714741-65714760 | None:intergenic | 30.0% | |
| CACATCATATTCATTGCTTT+AGG | + | chr3_2:65714795-65714814 | None:intergenic | 30.0% | |
| GTAGGATATGAAACTTTGAA+CGG | - | chr3_2:65714905-65714924 | Msa0418070:intron | 30.0% | |
| TAGGATATGAAACTTTGAAC+GGG | - | chr3_2:65714906-65714925 | Msa0418070:intron | 30.0% | |
| CATATTGCCGTAACAAAAAT+AGG | - | chr3_2:65715068-65715087 | Msa0418070:intron | 30.0% | |
| !!! | TGTCAAGCCTATTTTTGTTA+CGG | + | chr3_2:65715078-65715097 | None:intergenic | 30.0% |
| !!! | TTTATTTTAAGGCGAGCAAT+TGG | + | chr3_2:65715247-65715266 | None:intergenic | 30.0% |
| CATGTGTTGGAGATAATATT+GGG | + | chr3_2:65715272-65715291 | None:intergenic | 30.0% | |
| TCATGTGTTGGAGATAATAT+TGG | + | chr3_2:65715273-65715292 | None:intergenic | 30.0% | |
| TTTCTTTATTGGTCATGTGT+TGG | + | chr3_2:65715285-65715304 | None:intergenic | 30.0% | |
| GACATAATTGAATTCACACA+AGG | + | chr3_2:65715339-65715358 | None:intergenic | 30.0% | |
| !! | AATTATGTCCTTTGATTTGG+TGG | - | chr3_2:65715350-65715369 | Msa0418070:intron | 30.0% |
| AATGAAATCCACCAAATCAA+AGG | + | chr3_2:65715361-65715380 | None:intergenic | 30.0% | |
| !! | ATTTGGTGGATTTCATTTCT+TGG | - | chr3_2:65715364-65715383 | Msa0418070:intron | 30.0% |
| !!! | TTTTTTCAGAATTTGAGGGA+GGG | - | chr3_2:65715432-65715451 | Msa0418070:intron | 30.0% |
| AAATCATGTGCAAAATGAGA+AGG | - | chr3_2:65715467-65715486 | Msa0418070:intron | 30.0% | |
| TAGAGTGAATAGATCCATTA+AGG | - | chr3_2:65715612-65715631 | Msa0418070:intron | 30.0% | |
| ! | GCAAGCTTAAGTTGTTAATT+TGG | - | chr3_2:65715732-65715751 | Msa0418070:intron | 30.0% |
| TTTAGGTGATATAGGTACAA+AGG | - | chr3_2:65715772-65715791 | Msa0418070:intron | 30.0% | |
| TTAGGTGATATAGGTACAAA+GGG | - | chr3_2:65715773-65715792 | Msa0418070:intron | 30.0% | |
| ! | TATTGTTGTAGCACTTTTGA+TGG | - | chr3_2:65715899-65715918 | Msa0418070:intron | 30.0% |
| AGAAGCCTATAGAACAAAAA+TGG | + | chr3_2:65715940-65715959 | None:intergenic | 30.0% | |
| AGTTAACGTAACATAATAGC+TGG | + | chr3_2:65716256-65716275 | None:intergenic | 30.0% | |
| ! | TTTTGTGTTTTCTTACTGTC+AGG | - | chr3_2:65716290-65716309 | Msa0418070:intron | 30.0% |
| ATTAAGCAATGTACCTTACT+TGG | + | chr3_2:65716375-65716394 | None:intergenic | 30.0% | |
| TCATTACTTGGACTATGAAT+AGG | - | chr3_2:65716556-65716575 | Msa0418070:intron | 30.0% | |
| CATTACTTGGACTATGAATA+GGG | - | chr3_2:65716557-65716576 | Msa0418070:intron | 30.0% | |
| TTGATTATTGTGTCTTTGTC+TGG | - | chr3_2:65716816-65716835 | Msa0418070:intron | 30.0% | |
| !! | AAGTCTCTGGAATGTAAAAT+TGG | - | chr3_2:65716869-65716888 | Msa0418070:intron | 30.0% |
| TAACAGCAAGAATTAGACAT+TGG | + | chr3_2:65716940-65716959 | None:intergenic | 30.0% | |
| TCTAGCATTATGCATTGTTT+GGG | - | chr3_2:65717092-65717111 | Msa0418070:intron | 30.0% | |
| ! | TTTTCTTGAAGCACAAAACT+GGG | + | chr3_2:65717126-65717145 | None:intergenic | 30.0% |
| ! | ATTTTCTTGAAGCACAAAAC+TGG | + | chr3_2:65717127-65717146 | None:intergenic | 30.0% |
| CTCTATACCATCATTTAATC+AGG | - | chr3_2:65717260-65717279 | Msa0418070:intron | 30.0% | |
| TACCATCATTTAATCAGGTT+TGG | - | chr3_2:65717265-65717284 | Msa0418070:intron | 30.0% | |
| TTCCAAACCTGATTAAATGA+TGG | + | chr3_2:65717270-65717289 | None:intergenic | 30.0% | |
| ! | AGCCAATACAATTTTCTTCT+AGG | - | chr3_2:65717426-65717445 | Msa0418070:intron | 30.0% |
| GTCCTAGAAGAAAATTGTAT+TGG | + | chr3_2:65717431-65717450 | None:intergenic | 30.0% | |
| !! | TTCTTCTAGGACAATGAAAT+TGG | - | chr3_2:65717439-65717458 | Msa0418070:intron | 30.0% |
| !! | ACAATGAAATTGGTAGTGAA+TGG | - | chr3_2:65717449-65717468 | Msa0418070:intron | 30.0% |
| !!! | ATTGTGTTGTTTTGGTCATT+TGG | - | chr3_2:65717545-65717564 | Msa0418070:CDS | 30.0% |
| ACTATGTATAAACCCAAATG+TGG | - | chr3_2:65718110-65718129 | Msa0418070:intron | 30.0% | |
| TTTGTGAAAAGAATTGTCCA+TGG | - | chr3_2:65718188-65718207 | Msa0418070:intron | 30.0% | |
| TATTCCCTTAATTAATGAGG+CGG | - | chr3_2:65718352-65718371 | Msa0418070:intron | 30.0% | |
| !! | AGTTTAAGTTGCTCTAAATG+GGG | + | chr3_2:65718415-65718434 | None:intergenic | 30.0% |
| !! | GAGTTTAAGTTGCTCTAAAT+GGG | + | chr3_2:65718416-65718435 | None:intergenic | 30.0% |
| !! | AGAGTTTAAGTTGCTCTAAA+TGG | + | chr3_2:65718417-65718436 | None:intergenic | 30.0% |
| TTTGGATGTACCAATTGATT+AGG | - | chr3_2:65718464-65718483 | Msa0418070:intron | 30.0% | |
| ATATAGAGAGCCTAATCAAT+TGG | + | chr3_2:65718477-65718496 | None:intergenic | 30.0% | |
| ATTAAAAGCTGAAAGGATAG+CGG | + | chr3_2:65718560-65718579 | None:intergenic | 30.0% | |
| TTTATAACATAAGCTGCAGT+TGG | - | chr3_2:65718882-65718901 | Msa0418070:intron | 30.0% | |
| ATTATAACATAAGCTGCAGT+TGG | - | chr3_2:65718968-65718987 | Msa0418070:intron | 30.0% | |
| TAGAACCACTCTGATTAATA+GGG | + | chr3_2:65719027-65719046 | None:intergenic | 30.0% | |
| ATAGAACCACTCTGATTAAT+AGG | + | chr3_2:65719028-65719047 | None:intergenic | 30.0% | |
| ! | AGTTGAGAAATGTACTCTTT+TGG | - | chr3_2:65719052-65719071 | Msa0418070:intron | 30.0% |
| ! | TTTTTCCTTAATACCCAACT+TGG | + | chr3_2:65719174-65719193 | None:intergenic | 30.0% |
| ! | TAATCTTCTTTTTCCCCTTA+TGG | - | chr3_2:65719243-65719262 | Msa0418070:intron | 30.0% |
| TACAAAAATCACCACCATAA+GGG | + | chr3_2:65719260-65719279 | None:intergenic | 30.0% | |
| TTACAAAAATCACCACCATA+AGG | + | chr3_2:65719261-65719280 | None:intergenic | 30.0% | |
| !!! | TTGGTTCTGTTTCTTTTTAC+AGG | - | chr3_2:65719456-65719475 | Msa0418070:intron | 30.0% |
| ! | TTTGGAACATATTTCATCGA+AGG | - | chr3_2:65719807-65719826 | Msa0418070:intron | 30.0% |
| AACATTAAAAAGGGTGAAGT+TGG | - | chr3_2:65719845-65719864 | Msa0418070:intron | 30.0% | |
| ! | ATTTTGTCTATATTGAGTCC+AGG | - | chr3_2:65719872-65719891 | Msa0418070:intron | 30.0% |
| ! | TTTTGTCTATATTGAGTCCA+GGG | - | chr3_2:65719873-65719892 | Msa0418070:intron | 30.0% |
| TTTCAGATTGAACACATGTT+TGG | + | chr3_2:65719933-65719952 | None:intergenic | 30.0% | |
| ! | ATGTGTTCAATCTGAAATGT+TGG | - | chr3_2:65719936-65719955 | Msa0418070:intron | 30.0% |
| AATAAATTCAGAATGCCACA+TGG | + | chr3_2:65719986-65720005 | None:intergenic | 30.0% | |
| AGGGAAATTACTAACATGCA+AGG | - | chr3_2:65713178-65713197 | Msa0418070:CDS | 35.0% | |
| ! | CTTTTCTCTATTCTGCTCTT+GGG | - | chr3_2:65713277-65713296 | Msa0418070:CDS | 35.0% |
| ! | TTTTCTCTATTCTGCTCTTG+GGG | - | chr3_2:65713278-65713297 | Msa0418070:CDS | 35.0% |
| ! | ATCTAGAATCTCATGCATGT+TGG | - | chr3_2:65713318-65713337 | Msa0418070:intron | 35.0% |
| !!! | TTGGTTTCTGGTGTTGATTT+TGG | - | chr3_2:65713337-65713356 | Msa0418070:intron | 35.0% |
| ! | CAATATGGTAATGAGGAACA+AGG | - | chr3_2:65713362-65713381 | Msa0418070:intron | 35.0% |
| ! | ATGTGATTTATGTTTGGGGT+TGG | - | chr3_2:65713487-65713506 | Msa0418070:intron | 35.0% |
| TGATGCAGATAGAAAGAAGA+AGG | - | chr3_2:65713717-65713736 | Msa0418070:intron | 35.0% | |
| GATAGAAAGAAGAAGGAAGA+AGG | - | chr3_2:65713724-65713743 | Msa0418070:intron | 35.0% | |
| !! | AAAAATAAATGGGTTGGGAG+TGG | - | chr3_2:65713883-65713902 | Msa0418070:intron | 35.0% |
| ! | AAGTAGCAATCAAGTTGTTG+TGG | - | chr3_2:65713998-65714017 | Msa0418070:intron | 35.0% |
| ! | AGTAGCAATCAAGTTGTTGT+GGG | - | chr3_2:65713999-65714018 | Msa0418070:intron | 35.0% |
| GTTGGAATACAAGTTGTTGT+AGG | - | chr3_2:65714113-65714132 | Msa0418070:intron | 35.0% | |
| GAAAGTGATTATGGAGGATT+AGG | - | chr3_2:65714267-65714286 | Msa0418070:intron | 35.0% | |
| !! | AGCTAGGAATAAGCTGTTTT+TGG | - | chr3_2:65714339-65714358 | Msa0418070:intron | 35.0% |
| !!! | AGCTGTTTTTGGAAGAAGTT+TGG | - | chr3_2:65714350-65714369 | Msa0418070:intron | 35.0% |
| TCACTTGATTCCAAGTTACA+GGG | + | chr3_2:65714425-65714444 | None:intergenic | 35.0% | |
| ATCACTTGATTCCAAGTTAC+AGG | + | chr3_2:65714426-65714445 | None:intergenic | 35.0% | |
| ! | TAACAAAATTCCGGACGTTT+TGG | - | chr3_2:65714465-65714484 | Msa0418070:intron | 35.0% |
| !!! | GGTACCAGTTTCATTGATTT+TGG | - | chr3_2:65714486-65714505 | Msa0418070:intron | 35.0% |
| TGGACCAAAATCAATGAAAC+TGG | + | chr3_2:65714493-65714512 | None:intergenic | 35.0% | |
| TCATCTACAGACTTCAAATC+TGG | + | chr3_2:65714513-65714532 | None:intergenic | 35.0% | |
| !!! | GTAGATGATTTTGAAGTTGG+GGG | - | chr3_2:65714525-65714544 | Msa0418070:intron | 35.0% |
| TTGATGTAGAGCATGAACTT+CGG | + | chr3_2:65714950-65714969 | None:intergenic | 35.0% | |
| GTTCATGCTCTACATCAAAT+AGG | - | chr3_2:65714952-65714971 | Msa0418070:intron | 35.0% | |
| CGAGCAATTGGTTAAATTTC+TGG | + | chr3_2:65715235-65715254 | None:intergenic | 35.0% | |
| !! | CATTTCTTGGTTTGTGACTA+TGG | - | chr3_2:65715377-65715396 | Msa0418070:intron | 35.0% |
| !!! | CTTTTTTCAGAATTTGAGGG+AGG | - | chr3_2:65715431-65715450 | Msa0418070:intron | 35.0% |
| !! | TTTTTCAGAATTTGAGGGAG+GGG | - | chr3_2:65715433-65715452 | Msa0418070:intron | 35.0% |
| ! | CTCATTTTGCACATGATTTG+AGG | + | chr3_2:65715466-65715485 | None:intergenic | 35.0% |
| TGAGAAGGAGAAATTTGAAG+AGG | - | chr3_2:65715482-65715501 | Msa0418070:intron | 35.0% | |
| GTCTAAACAATCTGAACCAA+AGG | - | chr3_2:65715843-65715862 | Msa0418070:intron | 35.0% | |
| TTAGTGGTGTTTAGTGGTTA+AGG | - | chr3_2:65715866-65715885 | Msa0418070:intron | 35.0% | |
| ! | TTCTGAAGATGCTAAAAGGT+TGG | - | chr3_2:65715956-65715975 | Msa0418070:intron | 35.0% |
| AATTGTGCAATCAAAGAGCA+TGG | + | chr3_2:65716104-65716123 | None:intergenic | 35.0% | |
| !! | TCTCTGGAATGTAAAATTGG+AGG | - | chr3_2:65716872-65716891 | Msa0418070:intron | 35.0% |
| AATGTAAAATTGGAGGTGAG+TGG | - | chr3_2:65716879-65716898 | Msa0418070:intron | 35.0% | |
| ATGTAAAATTGGAGGTGAGT+GGG | - | chr3_2:65716880-65716899 | Msa0418070:intron | 35.0% | |
| !! | TCTAATTCTTGCTGTTACTG+AGG | - | chr3_2:65716943-65716962 | Msa0418070:intron | 35.0% |
| ! | AGAGCAAGACAAAACCTTTT+CGG | + | chr3_2:65717073-65717092 | None:intergenic | 35.0% |
| CTCTAGCATTATGCATTGTT+TGG | - | chr3_2:65717091-65717110 | Msa0418070:intron | 35.0% | |
| CAAAGAGCTCTTTACTCTTT+AGG | + | chr3_2:65717947-65717966 | None:intergenic | 35.0% | |
| CTTCTCCCCAAATATTAATC+TGG | + | chr3_2:65718301-65718320 | None:intergenic | 35.0% | |
| CAGATTAATATTTGGGGAGA+AGG | - | chr3_2:65718299-65718318 | Msa0418070:intron | 35.0% | |
| AAGTCCGCCTCATTAATTAA+GGG | + | chr3_2:65718359-65718378 | None:intergenic | 35.0% | |
| CTCAACACAATTAATCAGAG+TGG | + | chr3_2:65718504-65718523 | None:intergenic | 35.0% | |
| GCATAAAAGTTCCCAATAAC+AGG | - | chr3_2:65718595-65718614 | Msa0418070:intron | 35.0% | |
| TGTTCAACATCTTGATATGC+AGG | + | chr3_2:65718738-65718757 | None:intergenic | 35.0% | |
| AAGAAACTTCTGCATTGTGT+AGG | + | chr3_2:65718864-65718883 | None:intergenic | 35.0% | |
| ACAAAAATCACCACCATAAG+GGG | + | chr3_2:65719259-65719278 | None:intergenic | 35.0% | |
| TTGTTATGTCCGTTGAAAAC+AGG | - | chr3_2:65719618-65719637 | Msa0418070:intron | 35.0% | |
| GAGGGAAGAAATGAGGAAAA+TGG | + | chr3_2:65713247-65713266 | None:intergenic | 40.0% | |
| TTTCCTCATTTCTTCCCTCT+AGG | - | chr3_2:65713248-65713267 | Msa0418070:CDS | 40.0% | |
| TTCCTCATTTCTTCCCTCTA+GGG | - | chr3_2:65713249-65713268 | Msa0418070:CDS | 40.0% | |
| ! | GCTTTTCTCTATTCTGCTCT+TGG | - | chr3_2:65713276-65713295 | Msa0418070:CDS | 40.0% |
| !! | ATCTCATGCATGTTGGTTTC+TGG | - | chr3_2:65713325-65713344 | Msa0418070:intron | 40.0% |
| ! | GAGCTAATGTCATGCTTTTC+AGG | - | chr3_2:65713390-65713409 | Msa0418070:intron | 40.0% |
| !!! | TGGGGTTGGAATTTTGATTC+TGG | - | chr3_2:65713501-65713520 | Msa0418070:intron | 40.0% |
| GAGACATTACCTCAAACACT+TGG | + | chr3_2:65713915-65713934 | None:intergenic | 40.0% | |
| ! | GTAGCAATCAAGTTGTTGTG+GGG | - | chr3_2:65714000-65714019 | Msa0418070:CDS | 40.0% |
| ! | TGTTTTGCGGAAGCTTAAGT+TGG | - | chr3_2:65714095-65714114 | Msa0418070:intron | 40.0% |
| CAGTTCACCAACTACTCATA+TGG | + | chr3_2:65714183-65714202 | None:intergenic | 40.0% | |
| ATTATGGAGGATTAGGGCAA+GGG | - | chr3_2:65714274-65714293 | Msa0418070:intron | 40.0% | |
| ! | TGCTGATTGAGATACAAGCT+AGG | - | chr3_2:65714323-65714342 | Msa0418070:intron | 40.0% |
| ! | AGTTTGGTGAAACCCGTATT+TGG | - | chr3_2:65714366-65714385 | Msa0418070:intron | 40.0% |
| ! | GTTTGGTGAAACCCGTATTT+GGG | - | chr3_2:65714367-65714386 | Msa0418070:intron | 40.0% |
| ! | GTGAGTTCTTACCGTTTTAG+TGG | + | chr3_2:65714401-65714420 | None:intergenic | 40.0% |
| ! | GGCAATTGATAGCAGAATTG+AGG | - | chr3_2:65715188-65715207 | Msa0418070:intron | 40.0% |
| TAACTTGACGTGTTCTTGAC+AGG | - | chr3_2:65715584-65715603 | Msa0418070:intron | 40.0% | |
| AGGTACAAAGGGAATGATGA+TGG | - | chr3_2:65715784-65715803 | Msa0418070:intron | 40.0% | |
| !! | GATGGTACTGATCAAGTTAG+TGG | - | chr3_2:65715802-65715821 | Msa0418070:intron | 40.0% |
| CAATCTGAACCAAAGGTTAG+TGG | - | chr3_2:65715850-65715869 | Msa0418070:intron | 40.0% | |
| CACTAAACACCACTAACCTT+TGG | + | chr3_2:65715862-65715881 | None:intergenic | 40.0% | |
| CAAAGGTTAGTGGTGTTTAG+TGG | - | chr3_2:65715860-65715879 | Msa0418070:intron | 40.0% | |
| ! | AGGCTTCTGAAGATGCTAAA+AGG | - | chr3_2:65715952-65715971 | Msa0418070:intron | 40.0% |
| TACACAAGCTTCTAAACCAC+AGG | - | chr3_2:65716073-65716092 | Msa0418070:intron | 40.0% | |
| ! | AAAGAGCATGGTAAAACCTG+TGG | + | chr3_2:65716092-65716111 | None:intergenic | 40.0% |
| ! | GTTTTCTTACTGTCAGGATG+TGG | - | chr3_2:65716296-65716315 | Msa0418070:intron | 40.0% |
| ATGCAGCAATCTGATTCTTC+TGG | + | chr3_2:65716349-65716368 | None:intergenic | 40.0% | |
| ! | TTTTAACAGAAGCCTGACCA+TGG | + | chr3_2:65716761-65716780 | None:intergenic | 40.0% |
| TGTAAAATTGGAGGTGAGTG+GGG | - | chr3_2:65716881-65716900 | Msa0418070:intron | 40.0% | |
| AGATACTATCCATCATCGCA+TGG | + | chr3_2:65717010-65717029 | None:intergenic | 40.0% | |
| ACTGCATAAAAGCAGATAGC+AGG | + | chr3_2:65717341-65717360 | None:intergenic | 40.0% | |
| ! | TAGAGGATGCAATGGTGTTT+TGG | + | chr3_2:65717399-65717418 | None:intergenic | 40.0% |
| GAATGGATCGTCTATAACTC+AGG | - | chr3_2:65717466-65717485 | Msa0418070:intron | 40.0% | |
| !! | GAGTGAATACTTGGTGTTTG+AGG | - | chr3_2:65717710-65717729 | Msa0418070:intron | 40.0% |
| ! | GTCCATGGCTGATTTAATTG+AGG | - | chr3_2:65718203-65718222 | Msa0418070:intron | 40.0% |
| GAATACACTCATCCTTCTTG+AGG | + | chr3_2:65718277-65718296 | None:intergenic | 40.0% | |
| GGAGAAGGCTTCAAAAGTAA+CGG | - | chr3_2:65718314-65718333 | Msa0418070:intron | 40.0% | |
| CAAGTCCGCCTCATTAATTA+AGG | + | chr3_2:65718360-65718379 | None:intergenic | 40.0% | |
| ! | AATTAATGAGGCGGACTTGA+AGG | - | chr3_2:65718361-65718380 | Msa0418070:intron | 40.0% |
| TTGAAGGAGAAATAGGGCAA+TGG | - | chr3_2:65718377-65718396 | Msa0418070:intron | 40.0% | |
| ATAGGGCAATGGAACAAAAC+AGG | - | chr3_2:65718388-65718407 | Msa0418070:intron | 40.0% | |
| CGGCAAAATGAATGGTTGAT+TGG | + | chr3_2:65718540-65718559 | None:intergenic | 40.0% | |
| ! | AAGGATAGCGGCAAAATGAA+TGG | + | chr3_2:65718548-65718567 | None:intergenic | 40.0% |
| GTACAGTTCACATTCTTCGA+AGG | + | chr3_2:65718771-65718790 | None:intergenic | 40.0% | |
| CTGCATTGTGTAGGAGAATT+TGG | + | chr3_2:65718855-65718874 | None:intergenic | 40.0% | |
| ! | TTGGCAGCAGAAAGTACATA+AGG | + | chr3_2:65719155-65719174 | None:intergenic | 40.0% |
| ! | TCTTCTTTTTCCCCTTATGG+TGG | - | chr3_2:65719246-65719265 | Msa0418070:intron | 40.0% |
| ACAGTAGATGCGTTAAGAAC+AGG | - | chr3_2:65719320-65719339 | Msa0418070:intron | 40.0% | |
| AACAGGAGCAACTACTATGA+AGG | - | chr3_2:65719337-65719356 | Msa0418070:intron | 40.0% | |
| CAACTCGATCGTTAAAGACT+TGG | + | chr3_2:65719404-65719423 | None:intergenic | 40.0% | |
| CTGTTCATTTATCTCGTCCA+TGG | + | chr3_2:65719504-65719523 | None:intergenic | 40.0% | |
| AAATAAGCAGCTGCACCAAT+TGG | + | chr3_2:65719566-65719585 | None:intergenic | 40.0% | |
| !! | GTGTACCTTTTGATTCTCTC+CGG | - | chr3_2:65719653-65719672 | Msa0418070:intron | 40.0% |
| TAAGTCCGGAGAGAATCAAA+AGG | + | chr3_2:65719661-65719680 | None:intergenic | 40.0% | |
| TTCGTATATTAGCACTACCC+TGG | + | chr3_2:65719893-65719912 | None:intergenic | 40.0% | |
| !! | CTGAAATGTTGGTGCTACAT+TGG | - | chr3_2:65719947-65719966 | Msa0418070:intron | 40.0% |
| !! | GGTTTTAATGCATGTCCATG+TGG | - | chr3_2:65719968-65719987 | Msa0418070:CDS | 40.0% |
| ! | TTGTTCTTTTCAGCACGAAC+TGG | - | chr3_2:65720004-65720023 | Msa0418070:CDS | 40.0% |
| GGAAGCAGAACTTGAAGAAT+TGG | - | chr3_2:65720025-65720044 | Msa0418070:CDS | 40.0% | |
| AGAATTGGAGAATGCTGAGT+TGG | - | chr3_2:65720040-65720059 | Msa0418070:CDS | 40.0% | |
| AATTCATCTTCCTCAGGAGT+CGG | + | chr3_2:65720158-65720177 | None:intergenic | 40.0% | |
| ATGAGGAAAATGGAGCTTGC+TGG | + | chr3_2:65713237-65713256 | None:intergenic | 45.0% | |
| GGGAATGCATTGTTCAAAGC+TGG | - | chr3_2:65713745-65713764 | Msa0418070:intron | 45.0% | |
| GATTATGGAGGATTAGGGCA+AGG | - | chr3_2:65714273-65714292 | Msa0418070:intron | 45.0% | |
| ! | TGAAACCCGTATTTGGGACA+GGG | - | chr3_2:65714373-65714392 | Msa0418070:intron | 45.0% |
| AGAACTCACTCCCTGTAACT+TGG | - | chr3_2:65714412-65714431 | Msa0418070:intron | 45.0% | |
| GAAACTGGTACCAAAACGTC+CGG | + | chr3_2:65714478-65714497 | None:intergenic | 45.0% | |
| CACACAAGGGAGACATAGAA+AGG | + | chr3_2:65715325-65715344 | None:intergenic | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | - | chr3_2:65715639-65715658 | Msa0418070:intron | 45.0% | |
| TGCTCTAGCACTCTCGATTT+CGG | + | chr3_2:65716009-65716028 | None:intergenic | 45.0% | |
| TCTTACTGTCAGGATGTGGA+TGG | - | chr3_2:65716300-65716319 | Msa0418070:intron | 45.0% | |
| ATTGCTGCATCAGCCAAGTA+AGG | - | chr3_2:65716359-65716378 | Msa0418070:intron | 45.0% | |
| GTGATCTCAGATAGCTGATG+AGG | + | chr3_2:65716791-65716810 | None:intergenic | 45.0% | |
| TGTGCAAGTAGACAAGTCTC+TGG | - | chr3_2:65716856-65716875 | Msa0418070:intron | 45.0% | |
| !! | TTCTTGCTGTTACTGAGGAG+AGG | - | chr3_2:65716948-65716967 | Msa0418070:intron | 45.0% |
| !! | TCTTGCTGTTACTGAGGAGA+GGG | - | chr3_2:65716949-65716968 | Msa0418070:intron | 45.0% |
| !! | GGATGCAATGGTGTTTTGGA+AGG | + | chr3_2:65717395-65717414 | None:intergenic | 45.0% |
| ACACCATTGCATCCTCTATC+TGG | - | chr3_2:65717401-65717420 | Msa0418070:CDS | 45.0% | |
| CACCATTGCATCCTCTATCT+GGG | - | chr3_2:65717402-65717421 | Msa0418070:CDS | 45.0% | |
| TACCCAGATAGAGGATGCAA+TGG | + | chr3_2:65717407-65717426 | None:intergenic | 45.0% | |
| !! | TGTATTGGCTACCCAGATAG+AGG | + | chr3_2:65717416-65717435 | None:intergenic | 45.0% |
| AACAGGCAGCTTCCACATTT+GGG | + | chr3_2:65718125-65718144 | None:intergenic | 45.0% | |
| AAACAGGCAGCTTCCACATT+TGG | + | chr3_2:65718126-65718145 | None:intergenic | 45.0% | |
| CGCCTCAATTAAATCAGCCA+TGG | + | chr3_2:65718208-65718227 | None:intergenic | 45.0% | |
| ! | TGGCTGATTTAATTGAGGCG+TGG | - | chr3_2:65718208-65718227 | Msa0418070:intron | 45.0% |
| GCGGACTTGAAGGAGAAATA+GGG | - | chr3_2:65718371-65718390 | Msa0418070:intron | 45.0% | |
| ATTAATAGGGCAGTCTCACC+TGG | + | chr3_2:65719014-65719033 | None:intergenic | 45.0% | |
| GACTGCCCTATTAATCAGAG+TGG | - | chr3_2:65719019-65719038 | Msa0418070:intron | 45.0% | |
| TGTACTTTCTGCTGCCAAGT+TGG | - | chr3_2:65719157-65719176 | Msa0418070:intron | 45.0% | |
| GTACTTTCTGCTGCCAAGTT+GGG | - | chr3_2:65719158-65719177 | Msa0418070:intron | 45.0% | |
| ! | TGCTGCCAAGTTGGGTATTA+AGG | - | chr3_2:65719166-65719185 | Msa0418070:intron | 45.0% |
| TAACGCATCTACTGTTTCCG+TGG | + | chr3_2:65719315-65719334 | None:intergenic | 45.0% | |
| ! | TGATGATGTCGACAAGACCA+TGG | - | chr3_2:65719484-65719503 | Msa0418070:intron | 45.0% |
| !! | GAAGCATTGTCAGCTCCAAT+TGG | - | chr3_2:65719548-65719567 | Msa0418070:intron | 45.0% |
| !!! | TGCAGCTGCTTATTTTGACG+AGG | - | chr3_2:65719571-65719590 | Msa0418070:intron | 45.0% |
| GACTCCTGAGGAAGATGAAT+TGG | - | chr3_2:65720157-65720176 | Msa0418070:intron | 45.0% | |
| !! | TTATAAATATCATATTATAA+CGG | + | chr3_2:65715567-65715586 | None:intergenic | 5.0% |
| ! | GTGAAACCCGTATTTGGGAC+AGG | - | chr3_2:65714372-65714391 | Msa0418070:intron | 50.0% |
| TTGAAGTTGGGGGCAGAAGT+AGG | - | chr3_2:65714535-65714554 | Msa0418070:intron | 50.0% | |
| ACTTTGAACGGGAACTCCTC+AGG | - | chr3_2:65714917-65714936 | Msa0418070:intron | 50.0% | |
| GAACTTCGGCAACATACCTG+AGG | + | chr3_2:65714936-65714955 | None:intergenic | 50.0% | |
| GCTGATAGCAGGCACCTTAA+TGG | + | chr3_2:65715629-65715648 | None:intergenic | 50.0% | |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | + | chr3_2:65715640-65715659 | None:intergenic | 50.0% |
| !! | AATCGAGAGTGCTAGAGCAG+TGG | - | chr3_2:65716010-65716029 | Msa0418070:intron | 50.0% |
| ACTGGTGGAAGAGGTTCAAG+AGG | - | chr3_2:65716323-65716342 | Msa0418070:intron | 50.0% | |
| GAATGCTTTGCAAAGCACGC+AGG | - | chr3_2:65716903-65716922 | Msa0418070:intron | 50.0% | |
| GTTCGTTGACCATGCGATGA+TGG | - | chr3_2:65716998-65717017 | Msa0418070:CDS | 50.0% | |
| TCTTGAGGAAACAAACCGCG+CGG | + | chr3_2:65718262-65718281 | None:intergenic | 50.0% | |
| ! | CGCGGTTTGTTTCCTCAAGA+AGG | - | chr3_2:65718262-65718281 | Msa0418070:intron | 50.0% |
| ! | GGCGGACTTGAAGGAGAAAT+AGG | - | chr3_2:65718370-65718389 | Msa0418070:intron | 50.0% |
| !! | AGAAGGTGCTAAAGCCACCA+CGG | - | chr3_2:65719295-65719314 | Msa0418070:intron | 50.0% |
| GGAGCAGGAGCTGTAAATGT+TGG | + | chr3_2:65720083-65720102 | None:intergenic | 50.0% | |
| GCTGCCAATTCATCTTCCTC+AGG | + | chr3_2:65720164-65720183 | None:intergenic | 50.0% | |
| AGATGAATTGGCAGCTCTGC+AGG | - | chr3_2:65720169-65720188 | Msa0418070:intron | 50.0% | |
| CGCCCTAGAGGGAAGAAATG+AGG | + | chr3_2:65713254-65713273 | None:intergenic | 55.0% | |
| GAGAAAAGCTGCGCCCTAGA+GGG | + | chr3_2:65713265-65713284 | None:intergenic | 55.0% | |
| AGAGAAAAGCTGCGCCCTAG+AGG | + | chr3_2:65713266-65713285 | None:intergenic | 55.0% | |
| TGGCGCTCACCAAGTGTTTG+AGG | - | chr3_2:65713903-65713922 | Msa0418070:intron | 55.0% | |
| GATTAGGGCAAGGGCAGAAG+TGG | - | chr3_2:65714283-65714302 | Msa0418070:intron | 55.0% | |
| TGGAGCCCTGTCCCAAATAC+GGG | + | chr3_2:65714381-65714400 | None:intergenic | 55.0% | |
| GTGGAGCCCTGTCCCAAATA+CGG | + | chr3_2:65714382-65714401 | None:intergenic | 55.0% | |
| GGGACAGGGCTCCACTAAAA+CGG | - | chr3_2:65714387-65714406 | Msa0418070:intron | 55.0% | |
| CAGAATTTGAGGGAGGGGAG+TGG | - | chr3_2:65715438-65715457 | Msa0418070:intron | 55.0% | |
| AGTGCTAGAGCAGTGGTGCT+GGG | - | chr3_2:65716017-65716036 | Msa0418070:intron | 55.0% | |
| ! | AGAGCAGTGGTGCTGGGAAT+TGG | - | chr3_2:65716023-65716042 | Msa0418070:intron | 55.0% |
| ! | GAGCAGTGGTGCTGGGAATT+GGG | - | chr3_2:65716024-65716043 | Msa0418070:intron | 55.0% |
| ! | AGCAGTGGTGCTGGGAATTG+GGG | - | chr3_2:65716025-65716044 | Msa0418070:intron | 55.0% |
| CTGTCAGGATGTGGATGGAC+TGG | - | chr3_2:65716305-65716324 | Msa0418070:intron | 55.0% | |
| !! | TCAGGATGTGGATGGACTGG+TGG | - | chr3_2:65716308-65716327 | Msa0418070:intron | 55.0% |
| !! | TGTGGATGGACTGGTGGAAG+AGG | - | chr3_2:65716314-65716333 | Msa0418070:intron | 55.0% |
| TTTCAACGCAGCTCCTGCCA+TGG | - | chr3_2:65716741-65716760 | Msa0418070:intron | 55.0% | |
| AACAGAAGCCTGACCATGGC+AGG | + | chr3_2:65716757-65716776 | None:intergenic | 55.0% | |
| CGCATCTACTGTTTCCGTGG+TGG | + | chr3_2:65719312-65719331 | None:intergenic | 55.0% | |
| CCAGCTGAGACATGCACTGT+GGG | + | chr3_2:65720104-65720123 | None:intergenic | 55.0% | |
| CCACAGTGCATGTCTCAGCT+GGG | - | chr3_2:65720102-65720121 | Msa0418070:intron | 55.0% | |
| TTTGCAGGAACAGGACGTGC+AGG | + | chr3_2:65720134-65720153 | None:intergenic | 55.0% | |
| GAGTGCTAGAGCAGTGGTGC+TGG | - | chr3_2:65716016-65716035 | Msa0418070:intron | 60.0% | |
| ! | AGTGGTGCTGGGAATTGGGG+AGG | - | chr3_2:65716028-65716047 | Msa0418070:intron | 60.0% |
| GAGGAAACAAACCGCGCGGA+CGG | + | chr3_2:65718258-65718277 | None:intergenic | 60.0% | |
| GAGACATGCACTGTGGGAGC+AGG | + | chr3_2:65720098-65720117 | None:intergenic | 60.0% | |
| CCCACAGTGCATGTCTCAGC+TGG | - | chr3_2:65720101-65720120 | Msa0418070:intron | 60.0% | |
| CCCAGCTGAGACATGCACTG+TGG | + | chr3_2:65720105-65720124 | None:intergenic | 60.0% | |
| CAGTGCATGTCTCAGCTGGG+AGG | - | chr3_2:65720105-65720124 | Msa0418070:intron | 60.0% | |
| ! | GGAGTCGGCTTTGCAGGAAC+AGG | + | chr3_2:65720143-65720162 | None:intergenic | 60.0% |
| ! | TCCTGCAAAGCCGACTCCTG+AGG | - | chr3_2:65720145-65720164 | Msa0418070:intron | 60.0% |
| ! | TCCTCAGGAGTCGGCTTTGC+AGG | + | chr3_2:65720149-65720168 | None:intergenic | 60.0% |
| ACGCAGCTCCTGCCATGGTC+AGG | - | chr3_2:65716746-65716765 | Msa0418070:intron | 65.0% | |
| GCATGAATTCGCCGTCCGCG+CGG | - | chr3_2:65718244-65718263 | Msa0418070:intron | 65.0% | |
| GGCAGCTCTGCAGGCTGAGA+TGG | - | chr3_2:65720178-65720197 | Msa0418070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 65713167 | 65720208 | 65713167 | ID=Msa0418070;Name=Msa0418070 |
| chr3_2 | mRNA | 65713167 | 65720208 | 65713167 | ID=Msa0418070-mRNA-1;Parent=Msa0418070;Name=Msa0418070-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.33|0.4|1|0.44|0.7|10|0|283 |
| chr3_2 | exon | 65720170 | 65720208 | 65720170 | ID=Msa0418070-mRNA-1:exon:14862;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65719964 | 65720064 | 65719964 | ID=Msa0418070-mRNA-1:exon:14861;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65717872 | 65717922 | 65717872 | ID=Msa0418070-mRNA-1:exon:14860;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65717511 | 65717589 | 65717511 | ID=Msa0418070-mRNA-1:exon:14859;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65717281 | 65717421 | 65717281 | ID=Msa0418070-mRNA-1:exon:14858;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65716995 | 65717063 | 65716995 | ID=Msa0418070-mRNA-1:exon:14857;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65716201 | 65716206 | 65716201 | ID=Msa0418070-mRNA-1:exon:14856;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65714000 | 65714091 | 65714000 | ID=Msa0418070-mRNA-1:exon:14855;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65713783 | 65713897 | 65713783 | ID=Msa0418070-mRNA-1:exon:14854;Parent=Msa0418070-mRNA-1 |
| chr3_2 | exon | 65713167 | 65713325 | 65713167 | ID=Msa0418070-mRNA-1:exon:14853;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65720170 | 65720208 | 65720170 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65719964 | 65720064 | 65719964 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65717872 | 65717922 | 65717872 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65717511 | 65717589 | 65717511 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65717281 | 65717421 | 65717281 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65716995 | 65717063 | 65716995 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65716201 | 65716206 | 65716201 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65714000 | 65714091 | 65714000 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65713783 | 65713897 | 65713783 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| chr3_2 | CDS | 65713167 | 65713325 | 65713167 | ID=Msa0418070-mRNA-1:cds;Parent=Msa0418070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
