Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087870 | XP_013469773.1 | 99.364 | 472 | 3 | 0 | 1 | 472 | 1 | 472 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087870 | sp|P52410|KASC1_ARATH | 82.636 | 478 | 72 | 3 | 1 | 472 | 1 | 473 | 0.0 | 815 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087870 | A0A072VQ81 | 99.364 | 472 | 3 | 0 | 1 | 472 | 1 | 472 | 0.0 | 968 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040180 | Msa0087870 | 0.828362 | 9.375405e-55 | -8.615850e-47 |
| Msa0087870 | Msa0475840 | 0.817064 | 4.002744e-52 | -8.615850e-47 |
| Msa0087870 | Msa1463250 | 0.862703 | 4.200452e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087870 | MtrunA17_Chr1g0204841 | 99.364 | 472 | 3 | 0 | 1 | 472 | 1 | 472 | 0.0 | 968 |
| Msa0087870 | MtrunA17_Chr4g0052121 | 82.489 | 474 | 73 | 5 | 1 | 472 | 1 | 466 | 0.0 | 764 |
| Msa0087870 | MtrunA17_Chr8g0388511 | 74.674 | 383 | 97 | 0 | 45 | 427 | 2 | 384 | 0.0 | 618 |
| Msa0087870 | MtrunA17_Chr2g0301361 | 56.416 | 452 | 191 | 4 | 22 | 471 | 41 | 488 | 1.20e-176 | 504 |
| Msa0087870 | MtrunA17_Chr4g0070171 | 58.000 | 400 | 166 | 2 | 73 | 471 | 93 | 491 | 4.63e-170 | 488 |
| Msa0087870 | MtrunA17_Chr8g0388531 | 70.476 | 210 | 62 | 0 | 31 | 240 | 16 | 225 | 1.18e-104 | 311 |
| Msa0087870 | MtrunA17_Chr8g0388551 | 54.198 | 262 | 68 | 2 | 31 | 292 | 8 | 217 | 5.93e-93 | 285 |
| Msa0087870 | MtrunA17_Chr1g0183091 | 38.479 | 434 | 240 | 7 | 60 | 468 | 37 | 468 | 5.60e-90 | 282 |
| Msa0087870 | MtrunA17_Chr8g0388561 | 71.676 | 173 | 46 | 1 | 300 | 472 | 1 | 170 | 1.58e-87 | 265 |
| Msa0087870 | MtrunA17_Chr8g0388541 | 81.690 | 71 | 13 | 0 | 357 | 427 | 55 | 125 | 1.58e-34 | 125 |
| Msa0087870 | MtrunA17_Chr8g0388541 | 62.500 | 72 | 27 | 0 | 245 | 316 | 1 | 72 | 4.03e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087870 | AT5G46290.1 | 82.636 | 478 | 72 | 3 | 1 | 472 | 1 | 473 | 0.0 | 815 |
| Msa0087870 | AT5G46290.3 | 79.960 | 494 | 72 | 4 | 1 | 472 | 1 | 489 | 0.0 | 805 |
| Msa0087870 | AT5G46290.2 | 70.921 | 478 | 73 | 5 | 1 | 472 | 1 | 418 | 0.0 | 668 |
| Msa0087870 | AT1G74960.1 | 53.452 | 449 | 204 | 3 | 24 | 471 | 97 | 541 | 2.20e-169 | 488 |
| Msa0087870 | AT1G74960.3 | 53.452 | 449 | 204 | 3 | 24 | 471 | 97 | 541 | 2.20e-169 | 488 |
| Msa0087870 | AT1G74960.2 | 53.452 | 449 | 204 | 3 | 24 | 471 | 97 | 541 | 2.20e-169 | 488 |
| Msa0087870 | AT2G04540.1 | 38.391 | 435 | 238 | 9 | 60 | 469 | 31 | 460 | 1.55e-82 | 263 |
Find 142 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTATTATTGCTGAATATT+TGG | 0.107826 | 1_2:-68905743 | Msa0087870:CDS |
| TCCTTATGCTATTACAAATA+TGG | 0.113394 | 1_2:-68906618 | Msa0087870:CDS |
| TTTGTTATGGGAGAGGGTTC+TGG | 0.206680 | 1_2:-68906335 | Msa0087870:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 1_2:-68906590 | Msa0087870:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 1_2:+68906557 | None:intergenic |
| GGGAGAGGGTTCTGGAGTTT+TGG | 0.226128 | 1_2:-68906327 | Msa0087870:intron |
| TTCTTCTACATTGGAAATTT+CGG | 0.228440 | 1_2:+68907447 | None:intergenic |
| AGCGAATCGAGTTGGGAATT+TGG | 0.237235 | 1_2:+68906994 | None:intergenic |
| GACAAGTTGTTATTAATCTT+TGG | 0.273076 | 1_2:+68907391 | None:intergenic |
| CTCGCTTCATGGCATGTTCC+AGG | 0.286379 | 1_2:+68905770 | None:intergenic |
| CCTATTATTGCTGAATATTT+GGG | 0.287910 | 1_2:-68905742 | Msa0087870:CDS |
| TGCGATTATTCCAATTGGTT+TGG | 0.288023 | 1_2:-68906444 | Msa0087870:CDS |
| AGTTCTACAGCAAAAGTCTT+TGG | 0.290799 | 1_2:+68902202 | None:intergenic |
| GTAATCACAACACGCTTCTT+TGG | 0.291528 | 1_2:+68907121 | None:intergenic |
| ACGAGTGACTCTCTTGGTTT+TGG | 0.293212 | 1_2:+68907192 | None:intergenic |
| TATATCTTTAATTAACAATA+AGG | 0.294362 | 1_2:+68902095 | None:intergenic |
| TTCCACTCTTGCTGGTGATT+TGG | 0.297104 | 1_2:-68903728 | Msa0087870:CDS |
| GGTCACTGTCTTGGTGCAGC+TGG | 0.308174 | 1_2:-68903509 | Msa0087870:CDS |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 1_2:-68906382 | Msa0087870:CDS |
| CCAGGCATTTCAAATTCATT+TGG | 0.314348 | 1_2:-68902435 | Msa0087870:intron |
| CCTTATGCTATTACAAATAT+GGG | 0.317643 | 1_2:-68906617 | Msa0087870:CDS |
| ATTTCAAATTCATTTGGATT+TGG | 0.319137 | 1_2:-68902429 | Msa0087870:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 1_2:+68902620 | None:intergenic |
| TGGGTGGTTTCGTTGCTTGC+AGG | 0.323684 | 1_2:-68906424 | Msa0087870:CDS |
| CCCAAATATTCAGCAATAAT+AGG | 0.335330 | 1_2:+68905742 | None:intergenic |
| GTTAAGAATTTGATTGAAAA+GGG | 0.338451 | 1_2:-68906668 | Msa0087870:CDS |
| GCGATTATTCCAATTGGTTT+GGG | 0.344160 | 1_2:-68906443 | Msa0087870:CDS |
| ATGGGTCTTGCTTCGGTGTT+TGG | 0.344743 | 1_2:-68907094 | Msa0087870:CDS |
| GGAGATTAATGCTATCAAAA+AGG | 0.351656 | 1_2:-68903704 | Msa0087870:CDS |
| AGCATATAATGAACAATTAC+AGG | 0.353040 | 1_2:+68902247 | None:intergenic |
| AAGAAGCGTGTTGTGATTAC+TGG | 0.354759 | 1_2:-68907118 | Msa0087870:CDS |
| GCACGAAGATTTCATTGGTT+TGG | 0.355311 | 1_2:-68902167 | Msa0087870:three_prime_UTR |
| CGGTGCTGCAAATCTATCTA+AGG | 0.355647 | 1_2:-68906852 | Msa0087870:intron |
| ATGCAGCCATCCTGTTGTTA+TGG | 0.364668 | 1_2:+68903457 | None:intergenic |
| AATATGGGTTCAGCTTTACT+TGG | 0.368154 | 1_2:-68906602 | Msa0087870:CDS |
| TGGCGGCATTGGAAGATTTA+CGG | 0.377735 | 1_2:+68907224 | None:intergenic |
| GCTTTCAGGCCCTGATTGCC+AGG | 0.377973 | 1_2:-68902378 | Msa0087870:exon |
| GTCACTGTCTTGGTGCAGCT+GGG | 0.379436 | 1_2:-68903508 | Msa0087870:CDS |
| CACTCTTGCTGGTGATTTGG+CGG | 0.382291 | 1_2:-68903725 | Msa0087870:CDS |
| CAAAAGTCTTTGGAGCTAAC+TGG | 0.385274 | 1_2:+68902212 | None:intergenic |
| AGTTAAGAATTTGATTGAAA+AGG | 0.392053 | 1_2:-68906669 | Msa0087870:CDS |
| TAAGGAACGTGCTGGCGTTT+TGG | 0.393874 | 1_2:-68906732 | Msa0087870:CDS |
| CGGCATCTTCAAGGCTGCTC+TGG | 0.394560 | 1_2:+68905647 | None:intergenic |
| TTCTCTTTGCGGCGCGGTGG+TGG | 0.395427 | 1_2:+68907150 | None:intergenic |
| AATAGGTGCACCTCGCTTCA+TGG | 0.395532 | 1_2:+68905759 | None:intergenic |
| GGCGGCGGAGGTGGCGGCAT+TGG | 0.397650 | 1_2:+68907213 | None:intergenic |
| TACTGGTATGGGTCTTGCTT+CGG | 0.410766 | 1_2:-68907101 | Msa0087870:CDS |
| TCTTGTTATTGAATTGTTGT+CGG | 0.410900 | 1_2:-68902051 | Msa0087870:three_prime_UTR |
| AGAAGACAAGCCTGGCAATC+AGG | 0.414753 | 1_2:+68902368 | None:intergenic |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 1_2:-68906376 | Msa0087870:CDS |
| CATGCAACTTCCACTCTTGC+TGG | 0.426755 | 1_2:-68903736 | Msa0087870:CDS |
| TCTGACCAGCGAATCGAGTT+GGG | 0.430793 | 1_2:+68906987 | None:intergenic |
| TCAAATTCATTTGGATTTGG+TGG | 0.432807 | 1_2:-68902426 | Msa0087870:CDS |
| CCCATATTTGTAATAGCATA+AGG | 0.436887 | 1_2:+68906617 | None:intergenic |
| ACGCCGAGTCCGTCAGATCT+TGG | 0.446626 | 1_2:+68905682 | None:intergenic |
| ACGAAACCACCCAAACCAAT+TGG | 0.448666 | 1_2:+68906434 | None:intergenic |
| CTCACCTCTACGAATGTGAT+TGG | 0.450144 | 1_2:+68906499 | None:intergenic |
| CGTACGAATTGATTGATTGA+GGG | 0.453619 | 1_2:+68903434 | None:intergenic |
| GTACGAAGAAGGTGTGTGTA+AGG | 0.457015 | 1_2:+68907356 | None:intergenic |
| GTGTTCGAGTGCTTTCTTAC+CGG | 0.460627 | 1_2:+68906883 | None:intergenic |
| AGTGTCGAGAGAGCTTATTT+AGG | 0.462874 | 1_2:-68902125 | Msa0087870:three_prime_UTR |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 1_2:-68906375 | Msa0087870:CDS |
| TTCACAGGTATTGGAAAGCC+TGG | 0.471523 | 1_2:-68905788 | Msa0087870:intron |
| ATGTAGCACGAAGATTTCAT+TGG | 0.475677 | 1_2:-68902172 | Msa0087870:three_prime_UTR |
| CACTGTCTTGGTGCAGCTGG+GGG | 0.477386 | 1_2:-68903506 | Msa0087870:CDS |
| GATCCGTGACTTCAGTTCTG+AGG | 0.481182 | 1_2:-68906966 | Msa0087870:CDS |
| GAGACACACCGGCATCTTCA+AGG | 0.486243 | 1_2:+68905638 | None:intergenic |
| GCGTGTTGTGATTACTGGTA+TGG | 0.487195 | 1_2:-68907113 | Msa0087870:CDS |
| CTGTGATATCAGTCTATGAT+AGG | 0.488568 | 1_2:-68903530 | Msa0087870:intron |
| CACCGCGCCGCAAAGAGAAA+AGG | 0.488817 | 1_2:-68907146 | Msa0087870:CDS |
| CGCCAAATCACCAGCAAGAG+TGG | 0.490695 | 1_2:+68903726 | None:intergenic |
| GAGGCTGCGATTATTCCAAT+TGG | 0.500761 | 1_2:-68906449 | Msa0087870:CDS |
| ACGTACGAATTGATTGATTG+AGG | 0.504368 | 1_2:+68903433 | None:intergenic |
| ACGGTGAAAGCCATAACAAC+AGG | 0.505006 | 1_2:-68903467 | Msa0087870:CDS |
| ATCTGACCAGCGAATCGAGT+TGG | 0.506976 | 1_2:+68906986 | None:intergenic |
| TCACTGTCTTGGTGCAGCTG+GGG | 0.507952 | 1_2:-68903507 | Msa0087870:CDS |
| GAATGAAACAGTACCTCCTC+AGG | 0.510763 | 1_2:+68905616 | None:intergenic |
| CGAAGTGGTTCGAGCGGTGA+AGG | 0.511174 | 1_2:+68907247 | None:intergenic |
| GGGTGGTTTCGTTGCTTGCA+GGG | 0.511680 | 1_2:-68906423 | Msa0087870:CDS |
| AAATTCCCAACTCGATTCGC+TGG | 0.512075 | 1_2:-68906992 | Msa0087870:CDS |
| GAAGACAAGCCTGGCAATCA+GGG | 0.514627 | 1_2:+68902369 | None:intergenic |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 1_2:-68902578 | Msa0087870:intron |
| TCTTTGCGGCGCGGTGGTGG+TGG | 0.521161 | 1_2:+68907153 | None:intergenic |
| GGAAGCATCAAATCTATCAA+TGG | 0.528121 | 1_2:+68907015 | None:intergenic |
| GAGCGGTGAAGGACGGAGAG+TGG | 0.530454 | 1_2:+68907258 | None:intergenic |
| TACCGGCGACAATGCAGTAC+CGG | 0.534477 | 1_2:+68906900 | None:intergenic |
| CTCCGGTACTGCATTGTCGC+CGG | 0.535935 | 1_2:-68906902 | Msa0087870:CDS |
| CAGATTGATAAGGAACGTGC+TGG | 0.538608 | 1_2:-68906740 | Msa0087870:CDS |
| GTGGTTCGAGCGGTGAAGGA+CGG | 0.542160 | 1_2:+68907251 | None:intergenic |
| CGCGGTGGTGGTGGTGACCG+CGG | 0.542608 | 1_2:+68907162 | None:intergenic |
| GCACTCGAACACGCTAATCT+CGG | 0.545558 | 1_2:-68906872 | Msa0087870:CDS |
| TTTCTCTCTCTACGTCATTG+AGG | 0.546187 | 1_2:-68902309 | Msa0087870:three_prime_UTR |
| ATATGGGTTCAGCTTTACTT+GGG | 0.548003 | 1_2:-68906601 | Msa0087870:CDS |
| ACATGAAGAGAAGACAAGCC+TGG | 0.549620 | 1_2:+68902360 | None:intergenic |
| AAGCTTCTCGCTGGTGAGAG+TGG | 0.557032 | 1_2:-68907046 | Msa0087870:CDS |
| TCTATGATAGGTCACTGTCT+TGG | 0.557980 | 1_2:-68903518 | Msa0087870:CDS |
| ATTATTCCAATTGGTTTGGG+TGG | 0.559742 | 1_2:-68906440 | Msa0087870:CDS |
| CGTGTTGTGATTACTGGTAT+GGG | 0.562884 | 1_2:-68907112 | Msa0087870:CDS |
| ATCCGTGACTTCAGTTCTGA+GGG | 0.564390 | 1_2:-68906965 | Msa0087870:CDS |
| AGTTCTGAGGGTTACATCGA+CGG | 0.564909 | 1_2:-68906953 | Msa0087870:CDS |
| TGGCAATCAGGGCCTGAAAG+CGG | 0.566778 | 1_2:+68902380 | None:intergenic |
| GGTGAAGGACGGAGAGTGGA+GGG | 0.567501 | 1_2:+68907262 | None:intergenic |
| TACTATGATAAGCTTCTCGC+TGG | 0.568248 | 1_2:-68907055 | Msa0087870:CDS |
| GGAGACAATCATCAAGTCTC+CGG | 0.571089 | 1_2:+68906921 | None:intergenic |
| GTTCTGAGGGTTACATCGAC+GGG | 0.572909 | 1_2:-68906952 | Msa0087870:CDS |
| AATCGCAGCCTCAGTCCCAC+CGG | 0.576961 | 1_2:+68906460 | None:intergenic |
| ATGACTGATCCAAGATCTGA+CGG | 0.577090 | 1_2:-68905691 | Msa0087870:CDS |
| ATGACATGCTAATACCTTGG+TGG | 0.577600 | 1_2:+68903648 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 1_2:-68906940 | Msa0087870:CDS |
| CAGAGCAGCCTTGAAGATGC+CGG | 0.581799 | 1_2:-68905646 | Msa0087870:CDS |
| ACTGTATCAAAATCAACTGC+AGG | 0.584010 | 1_2:+68902614 | None:intergenic |
| CGGTGAAGGACGGAGAGTGG+AGG | 0.584270 | 1_2:+68907261 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 1_2:-68902409 | Msa0087870:CDS |
| TTGGTTGGATCAGGAATGGG+TGG | 0.590587 | 1_2:-68906713 | Msa0087870:CDS |
| CCATCACGTTCTTTATCCCA+AGG | 0.592200 | 1_2:+68906359 | None:intergenic |
| GGAGATACGAGTGACTCTCT+TGG | 0.597645 | 1_2:+68907186 | None:intergenic |
| ATTATTGCTGAATATTTGGG+AGG | 0.597683 | 1_2:-68905739 | Msa0087870:CDS |
| AAATGACTGACACTCACTGA+CGG | 0.598984 | 1_2:+68907330 | None:intergenic |
| GAGGCTGATTTGATGATAGC+CGG | 0.603068 | 1_2:-68906479 | Msa0087870:CDS |
| GGAGACTTGATGATTGTCTC+CGG | 0.603610 | 1_2:-68906919 | Msa0087870:CDS |
| TGCCGGTGTGTCTCCTGAGG+AGG | 0.610564 | 1_2:-68905629 | Msa0087870:intron |
| AACCCTCAGAACTGAAGTCA+CGG | 0.618872 | 1_2:+68906963 | None:intergenic |
| TTGGAAGATTTACGGCGAAG+TGG | 0.624191 | 1_2:+68907232 | None:intergenic |
| CCTTGGGATAAAGAACGTGA+TGG | 0.624852 | 1_2:-68906359 | Msa0087870:CDS |
| CATCAAAATAAATGCCACCA+AGG | 0.629679 | 1_2:-68903662 | Msa0087870:intron |
| GGGTTTGGAAGCTATTGCCA+CGG | 0.637443 | 1_2:-68903486 | Msa0087870:CDS |
| ACTGACGGAGAGTACGAAGA+AGG | 0.641989 | 1_2:+68907345 | None:intergenic |
| CAATCACATTCGTAGAGGTG+AGG | 0.648046 | 1_2:-68906498 | Msa0087870:CDS |
| CTGGAACATGCCATGAAGCG+AGG | 0.648287 | 1_2:-68905769 | Msa0087870:CDS |
| GATCCAAGATCTGACGGACT+CGG | 0.649080 | 1_2:-68905685 | Msa0087870:CDS |
| TACCTCCTCAGGAGACACAC+CGG | 0.652572 | 1_2:+68905627 | None:intergenic |
| CTGATTTGATGATAGCCGGT+GGG | 0.653774 | 1_2:-68906475 | Msa0087870:CDS |
| TGTTGTTATGGCTTTCACCG+TGG | 0.656749 | 1_2:+68903469 | None:intergenic |
| GATGATAGCCGGTGGGACTG+AGG | 0.658607 | 1_2:-68906468 | Msa0087870:CDS |
| ATTGGTTTGGAGTTATACAG+CGG | 0.667298 | 1_2:-68902154 | Msa0087870:three_prime_UTR |
| TTACGGCGAAGTGGTTCGAG+CGG | 0.671981 | 1_2:+68907241 | None:intergenic |
| TGAAAGCCATAACAACAGGA+TGG | 0.674758 | 1_2:-68903463 | Msa0087870:CDS |
| AGATGCCGGTGTGTCTCCTG+AGG | 0.678881 | 1_2:-68905632 | Msa0087870:CDS |
| GGTGGTGGTGGTGACCGCGG+CGG | 0.695733 | 1_2:+68907165 | None:intergenic |
| GCTGATTTGATGATAGCCGG+TGG | 0.696770 | 1_2:-68906476 | Msa0087870:CDS |
| GCTGCCAATCACATTCGTAG+AGG | 0.700168 | 1_2:-68906503 | Msa0087870:CDS |
| AGTCACTCGTATCTCCGCCG+CGG | 0.777115 | 1_2:-68907179 | Msa0087870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTGAAAATCAAATTTA+AGG | + | chr1_2:68902648-68902667 | None:intergenic | 10.0% |
| !! | TATATCTTTAATTAACAATA+AGG | + | chr1_2:68907330-68907349 | None:intergenic | 10.0% |
| !! | GCTAAAATTATCTATTTAAA+TGG | - | chr1_2:68903855-68903874 | Msa0087870:intron | 15.0% |
| !! | ATTTAATCCTATGATAAATA+GGG | - | chr1_2:68904272-68904291 | Msa0087870:intron | 15.0% |
| !!! | CTATTATCATTTTTCTTTTT+TGG | - | chr1_2:68904480-68904499 | Msa0087870:intron | 15.0% |
| !! | ACATAATAAAATTCATCTAT+TGG | - | chr1_2:68905405-68905424 | Msa0087870:intron | 15.0% |
| !!! | TATTTAATTCTTTGTTTTTC+AGG | - | chr1_2:68906013-68906032 | Msa0087870:intron | 15.0% |
| !! | AGTAAAAAAATAATTAACGA+TGG | - | chr1_2:68906175-68906194 | Msa0087870:intron | 15.0% |
| !! | TAAATAAGGTTATTATTGAA+CGG | + | chr1_2:68906394-68906413 | None:intergenic | 15.0% |
| !! | AAAAATAAAGGGATAAAATA+CGG | + | chr1_2:68906591-68906610 | None:intergenic | 15.0% |
| !!! | ACTACAACTTTTATATATTA+TGG | + | chr1_2:68907155-68907174 | None:intergenic | 15.0% |
| !!! | TGGTATTTAATGTATTTTGA+CGG | + | chr1_2:68902014-68902033 | None:intergenic | 20.0% |
| !! | AGTTAAGAATTTGATTGAAA+AGG | - | chr1_2:68902753-68902772 | Msa0087870:intron | 20.0% |
| !! | GTTAAGAATTTGATTGAAAA+GGG | - | chr1_2:68902754-68902773 | Msa0087870:intron | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr1_2:68902796-68902815 | None:intergenic | 20.0% |
| !!! | GTTACATTGATTAACAATAT+GGG | - | chr1_2:68903178-68903197 | Msa0087870:intron | 20.0% |
| !!! | TTACATTGATTAACAATATG+GGG | - | chr1_2:68903179-68903198 | Msa0087870:intron | 20.0% |
| !!! | GGTTTAGAATTATTCTTTTT+TGG | + | chr1_2:68903513-68903532 | None:intergenic | 20.0% |
| !!! | ATATAGAAATTAGCTTGTAT+AGG | + | chr1_2:68903594-68903613 | None:intergenic | 20.0% |
| !! | TTATCTATTTAAATGGTTGT+TGG | - | chr1_2:68903862-68903881 | Msa0087870:intron | 20.0% |
| !! | AGGAAAAAAATGAATCAAAT+GGG | + | chr1_2:68903898-68903917 | None:intergenic | 20.0% |
| !! | TTAATAGATGTGAAAAAGTT+AGG | - | chr1_2:68904125-68904144 | Msa0087870:intron | 20.0% |
| !! | CATTTAATCCTATGATAAAT+AGG | - | chr1_2:68904271-68904290 | Msa0087870:intron | 20.0% |
| !! | GCTAACATATAAATAGATAT+TGG | + | chr1_2:68905340-68905359 | None:intergenic | 20.0% |
| !! | AAAAAAATAATTAACGATGG+TGG | - | chr1_2:68906178-68906197 | Msa0087870:intron | 20.0% |
| !! | AAAAAATAATTAACGATGGT+GGG | - | chr1_2:68906179-68906198 | Msa0087870:intron | 20.0% |
| !! | TCTCCATTTATGAAAATAAA+GGG | + | chr1_2:68906268-68906287 | None:intergenic | 20.0% |
| !!! | CTCATTTTATCTTTCAATAA+TGG | - | chr1_2:68906314-68906333 | Msa0087870:intron | 20.0% |
| !!! | TTATTTGTCATTTAAGACAA+TGG | + | chr1_2:68906539-68906558 | None:intergenic | 20.0% |
| !! | TGTCTTAAATGACAAATAAA+AGG | - | chr1_2:68906540-68906559 | Msa0087870:CDS | 20.0% |
| !! | ATTTCAAATTCATTTGGATT+TGG | - | chr1_2:68906993-68907012 | Msa0087870:CDS | 20.0% |
| ! | TTCTTCTACATTGGAAATTT+CGG | + | chr1_2:68901978-68901997 | None:intergenic | 25.0% |
| !! | AACTATGTTTTCTTCTACAT+TGG | + | chr1_2:68901987-68902006 | None:intergenic | 25.0% |
| !! | GACAAGTTGTTATTAATCTT+TGG | + | chr1_2:68902034-68902053 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGCAGATTGATA+AGG | - | chr1_2:68902672-68902691 | Msa0087870:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr1_2:68902804-68902823 | Msa0087870:intron | 25.0% |
| ! | CCTTATGCTATTACAAATAT+GGG | - | chr1_2:68902805-68902824 | Msa0087870:intron | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr1_2:68902868-68902887 | None:intergenic | 25.0% |
| ! | ACAACAAGAAGAAAACATTA+AGG | + | chr1_2:68903144-68903163 | None:intergenic | 25.0% |
| !! | GGTTACATTGATTAACAATA+TGG | - | chr1_2:68903177-68903196 | Msa0087870:intron | 25.0% |
| !! | TACATTGATTAACAATATGG+GGG | - | chr1_2:68903180-68903199 | Msa0087870:intron | 25.0% |
| ! | ACCTATTATTGCTGAATATT+TGG | - | chr1_2:68903679-68903698 | Msa0087870:CDS | 25.0% |
| ! | CCTATTATTGCTGAATATTT+GGG | - | chr1_2:68903680-68903699 | Msa0087870:CDS | 25.0% |
| ! | GAGGAAAAAAATGAATCAAA+TGG | + | chr1_2:68903899-68903918 | None:intergenic | 25.0% |
| !!! | ATTTTAGTACACGATACAAT+AGG | - | chr1_2:68903994-68904013 | Msa0087870:intron | 25.0% |
| !! | TTTTAGTACACGATACAATA+GGG | - | chr1_2:68903995-68904014 | Msa0087870:intron | 25.0% |
| ! | GTCTTCCAATTACATAAATT+AGG | - | chr1_2:68904156-68904175 | Msa0087870:intron | 25.0% |
| ! | TGCATCCTAATTTATGTAAT+TGG | + | chr1_2:68904164-68904183 | None:intergenic | 25.0% |
| ! | AAATGCAAGAAAAATATGCA+CGG | - | chr1_2:68904307-68904326 | Msa0087870:intron | 25.0% |
| ! | AACTTGAATCATGAAGAAAA+AGG | - | chr1_2:68904611-68904630 | Msa0087870:intron | 25.0% |
| !! | CCTTTATTTCATCAAGAATA+TGG | + | chr1_2:68904925-68904944 | None:intergenic | 25.0% |
| ! | CCATATTCTTGATGAAATAA+AGG | - | chr1_2:68904922-68904941 | Msa0087870:intron | 25.0% |
| ! | TGATGAAATAAAGGAGAATT+TGG | - | chr1_2:68904931-68904950 | Msa0087870:intron | 25.0% |
| ! | TAAAATAACAGGAGTTCATT+TGG | + | chr1_2:68904986-68905005 | None:intergenic | 25.0% |
| ! | TTTCATATCGCTAAAATAAC+AGG | + | chr1_2:68904997-68905016 | None:intergenic | 25.0% |
| ! | ATTTCTTGATTTATACCTCA+AGG | - | chr1_2:68905018-68905037 | Msa0087870:intron | 25.0% |
| ! | AAATTCATCTATTGGATGTA+AGG | - | chr1_2:68905413-68905432 | Msa0087870:intron | 25.0% |
| ! | AATTCATCTATTGGATGTAA+GGG | - | chr1_2:68905414-68905433 | Msa0087870:intron | 25.0% |
| !!! | ATAAACTCATTTTTTTGCAG+AGG | + | chr1_2:68905450-68905469 | None:intergenic | 25.0% |
| ! | TCATTCATTAGGTCAAATAT+GGG | - | chr1_2:68905484-68905503 | Msa0087870:intron | 25.0% |
| ! | ATAACCTACTATGATTTAGA+AGG | + | chr1_2:68905830-68905849 | None:intergenic | 25.0% |
| !!! | ATTCTTTGTTTTTCAGGATT+AGG | - | chr1_2:68906019-68906038 | Msa0087870:intron | 25.0% |
| ! | ACACACAAAAAATAAGATGT+GGG | + | chr1_2:68906223-68906242 | None:intergenic | 25.0% |
| ! | TACACACAAAAAATAAGATG+TGG | + | chr1_2:68906224-68906243 | None:intergenic | 25.0% |
| !! | TGTGTGTATCTCTTTTTAAA+TGG | - | chr1_2:68906236-68906255 | Msa0087870:intron | 25.0% |
| ! | CTCTCCATTTATGAAAATAA+AGG | + | chr1_2:68906269-68906288 | None:intergenic | 25.0% |
| !!! | CTTTATTTTCATAAATGGAG+AGG | - | chr1_2:68906267-68906286 | Msa0087870:intron | 25.0% |
| ! | CAAAATGAAAGCTAAAAAAC+AGG | + | chr1_2:68906429-68906448 | None:intergenic | 25.0% |
| !! | TACAATAAGGACATTTTAGA+TGG | - | chr1_2:68906456-68906475 | Msa0087870:CDS | 25.0% |
| !! | TAGACTAAAAGATGTGTTTT+AGG | - | chr1_2:68906713-68906732 | Msa0087870:CDS | 25.0% |
| ! | GCATGATAAAGATCATAATT+TGG | - | chr1_2:68906910-68906929 | Msa0087870:CDS | 25.0% |
| ! | AGCATATAATGAACAATTAC+AGG | + | chr1_2:68907178-68907197 | None:intergenic | 25.0% |
| !!! | TCTTGTTATTGAATTGTTGT+CGG | - | chr1_2:68907371-68907390 | Msa0087870:five_prime_UTR | 25.0% |
| CCCATATTTGTAATAGCATA+AGG | + | chr1_2:68902808-68902827 | None:intergenic | 30.0% | |
| !! | TGGGATTGATTTAGGTTTTA+TGG | - | chr1_2:68902840-68902859 | Msa0087870:intron | 30.0% |
| !! | GGGATTGATTTAGGTTTTAT+GGG | - | chr1_2:68902841-68902860 | Msa0087870:intron | 30.0% |
| ! | ACATTGATTAACAATATGGG+GGG | - | chr1_2:68903181-68903200 | Msa0087870:intron | 30.0% |
| !!! | CTTTTTTGGATCATGTAAGA+TGG | + | chr1_2:68903499-68903518 | None:intergenic | 30.0% |
| TTAAACACTTCAAAGATGCA+AGG | + | chr1_2:68903534-68903553 | None:intergenic | 30.0% | |
| TACTATAACTTCACAGGTAT+TGG | - | chr1_2:68903625-68903644 | Msa0087870:intron | 30.0% | |
| CCCAAATATTCAGCAATAAT+AGG | + | chr1_2:68903683-68903702 | None:intergenic | 30.0% | |
| ATTATTGCTGAATATTTGGG+AGG | - | chr1_2:68903683-68903702 | Msa0087870:CDS | 30.0% | |
| TTTAGTACACGATACAATAG+GGG | - | chr1_2:68903996-68904015 | Msa0087870:intron | 30.0% | |
| ! | ATGTAGTTATGGTTTCAAGT+AGG | - | chr1_2:68904070-68904089 | Msa0087870:intron | 30.0% |
| TTCATCTCCCTATTTATCAT+AGG | + | chr1_2:68904282-68904301 | None:intergenic | 30.0% | |
| !! | TCGATTTTAGTCATTTCTGT+TGG | - | chr1_2:68904390-68904409 | Msa0087870:intron | 30.0% |
| !! | CGATTTTAGTCATTTCTGTT+GGG | - | chr1_2:68904391-68904410 | Msa0087870:intron | 30.0% |
| GTATAATGTATGTATAACCC+AGG | + | chr1_2:68904457-68904476 | None:intergenic | 30.0% | |
| GCAAACGATGAATATATAGA+TGG | - | chr1_2:68904548-68904567 | Msa0087870:intron | 30.0% | |
| AACGATGAATATATAGATGG+AGG | - | chr1_2:68904551-68904570 | Msa0087870:intron | 30.0% | |
| ACGATGAATATATAGATGGA+GGG | - | chr1_2:68904552-68904571 | Msa0087870:intron | 30.0% | |
| ! | TAGAAGGACTTTTGTGATTT+TGG | - | chr1_2:68904663-68904682 | Msa0087870:intron | 30.0% |
| ! | TGATTTTGGATCAAAATTCC+TGG | - | chr1_2:68904677-68904696 | Msa0087870:intron | 30.0% |
| ! | GATTTTGGATCAAAATTCCT+GGG | - | chr1_2:68904678-68904697 | Msa0087870:intron | 30.0% |
| GAACTTGCAACAATTATGAA+CGG | - | chr1_2:68904724-68904743 | Msa0087870:intron | 30.0% | |
| ! | CCAGTTTTTCTCACTAAATT+CGG | + | chr1_2:68904857-68904876 | None:intergenic | 30.0% |
| ! | TTCTGTTATACCCGTTTTAT+GGG | + | chr1_2:68905084-68905103 | None:intergenic | 30.0% |
| ! | TTTCTGTTATACCCGTTTTA+TGG | + | chr1_2:68905085-68905104 | None:intergenic | 30.0% |
| TACACAGAGAAAAGAGTAAA+TGG | + | chr1_2:68905310-68905329 | None:intergenic | 30.0% | |
| CTCATTCATTAGGTCAAATA+TGG | - | chr1_2:68905483-68905502 | Msa0087870:intron | 30.0% | |
| CATTCATTAGGTCAAATATG+GGG | - | chr1_2:68905485-68905504 | Msa0087870:intron | 30.0% | |
| GTAGAAATCAGTCTTAACAT+TGG | - | chr1_2:68905578-68905597 | Msa0087870:intron | 30.0% | |
| !! | TATGCCATTTGCTTATTTTC+AGG | - | chr1_2:68905646-68905665 | Msa0087870:CDS | 30.0% |
| TTGACCTGAAAATAAGCAAA+TGG | + | chr1_2:68905653-68905672 | None:intergenic | 30.0% | |
| GGAGATTAATGCTATCAAAA+AGG | - | chr1_2:68905718-68905737 | Msa0087870:CDS | 30.0% | |
| ! | TGCTATCAAAAAGGTTTTCA+AGG | - | chr1_2:68905727-68905746 | Msa0087870:CDS | 30.0% |
| GTTATAGTTGATCAATTCCA+TGG | - | chr1_2:68905845-68905864 | Msa0087870:intron | 30.0% | |
| !!! | TTTTTCAGGATTAGGATTGT+TGG | - | chr1_2:68906027-68906046 | Msa0087870:intron | 30.0% |
| !! | TTTTCAGGATTAGGATTGTT+GGG | - | chr1_2:68906028-68906047 | Msa0087870:intron | 30.0% |
| ATTTCTCCAAATGGAAGAAA+TGG | + | chr1_2:68906133-68906152 | None:intergenic | 30.0% | |
| ! | TGTGTCTTTATTTCTCCAAA+TGG | + | chr1_2:68906142-68906161 | None:intergenic | 30.0% |
| CCATTTATGAAAATAAAGGG+AGG | + | chr1_2:68906265-68906284 | None:intergenic | 30.0% | |
| !!! | CCTCCCTTTATTTTCATAAA+TGG | - | chr1_2:68906262-68906281 | Msa0087870:intron | 30.0% |
| GAAAGATAAAATGAGACAGA+AGG | + | chr1_2:68906309-68906328 | None:intergenic | 30.0% | |
| ! | AGTGAAAGATAATTTGAGAC+AGG | + | chr1_2:68906340-68906359 | None:intergenic | 30.0% |
| ! | ATTTTGCTCTTGCTACAATA+AGG | - | chr1_2:68906443-68906462 | Msa0087870:CDS | 30.0% |
| TGACAAATAAAAGGAGACAA+TGG | - | chr1_2:68906549-68906568 | Msa0087870:CDS | 30.0% | |
| GACAAATAAAAGGAGACAAT+GGG | - | chr1_2:68906550-68906569 | Msa0087870:CDS | 30.0% | |
| TCCAGGTGAGTAAAAATAAA+GGG | + | chr1_2:68906602-68906621 | None:intergenic | 30.0% | |
| ATCCAGGTGAGTAAAAATAA+AGG | + | chr1_2:68906603-68906622 | None:intergenic | 30.0% | |
| TCAAATTCATTTGGATTTGG+TGG | - | chr1_2:68906996-68907015 | Msa0087870:CDS | 30.0% | |
| ! | TTTGGATCCTTTTCTCTTTG+CGG | + | chr1_2:68902286-68902305 | None:intergenic | 35.0% |
| !! | GGAAGCATCAAATCTATCAA+TGG | + | chr1_2:68902410-68902429 | None:intergenic | 35.0% |
| ! | GGTTTAACTGTGTTTTCTGA+AGG | - | chr1_2:68902730-68902749 | Msa0087870:intron | 35.0% |
| AATATGGGTTCAGCTTTACT+TGG | - | chr1_2:68902820-68902839 | Msa0087870:intron | 35.0% | |
| ATATGGGTTCAGCTTTACTT+GGG | - | chr1_2:68902821-68902840 | Msa0087870:intron | 35.0% | |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr1_2:68902832-68902851 | Msa0087870:intron | 35.0% |
| TGCGATTATTCCAATTGGTT+TGG | - | chr1_2:68902978-68902997 | Msa0087870:intron | 35.0% | |
| ! | GCGATTATTCCAATTGGTTT+GGG | - | chr1_2:68902979-68902998 | Msa0087870:intron | 35.0% |
| !! | ATTATTCCAATTGGTTTGGG+TGG | - | chr1_2:68902982-68903001 | Msa0087870:intron | 35.0% |
| !!! | AGAACGTGATGGTTTTGTTA+TGG | - | chr1_2:68903074-68903093 | Msa0087870:intron | 35.0% |
| !!! | GAACGTGATGGTTTTGTTAT+GGG | - | chr1_2:68903075-68903094 | Msa0087870:intron | 35.0% |
| !! | CTTGTTGTTGTTGTTGTTGT+TGG | - | chr1_2:68903156-68903175 | Msa0087870:intron | 35.0% |
| GCTATACTTGCTTCTTAAGA+TGG | - | chr1_2:68903365-68903384 | Msa0087870:intron | 35.0% | |
| ! | TTTTCCTTTGTACATGATCC+CGG | - | chr1_2:68903429-68903448 | Msa0087870:intron | 35.0% |
| TTTGGATCATGTAAGATGGT+GGG | + | chr1_2:68903495-68903514 | None:intergenic | 35.0% | |
| ! | TTTTGGATCATGTAAGATGG+TGG | + | chr1_2:68903496-68903515 | None:intergenic | 35.0% |
| !!! | TTGTGTGTGTCCTGTTTTTT+TGG | - | chr1_2:68903566-68903585 | Msa0087870:intron | 35.0% |
| !!! | TGTGTGTGTCCTGTTTTTTT+GGG | - | chr1_2:68903567-68903586 | Msa0087870:intron | 35.0% |
| TGTATAGGACCCAAAAAAAC+AGG | + | chr1_2:68903579-68903598 | None:intergenic | 35.0% | |
| ACTGTTTCATTCTCTTTACC+CGG | - | chr1_2:68903817-68903836 | Msa0087870:intron | 35.0% | |
| ! | TAGCAACAAAAAGTGTAAGC+CGG | + | chr1_2:68903839-68903858 | None:intergenic | 35.0% |
| AGAAAGGAAAAACATGCTGA+AGG | + | chr1_2:68903921-68903940 | None:intergenic | 35.0% | |
| ! | TTCAGCATGTTTTTCCTTTC+TGG | - | chr1_2:68903920-68903939 | Msa0087870:intron | 35.0% |
| TTTCTGTTTGCTTGCAATAC+TGG | - | chr1_2:68903954-68903973 | Msa0087870:intron | 35.0% | |
| ! | TGAAGAGTATACATGTGAAG+CGG | - | chr1_2:68904193-68904212 | Msa0087870:intron | 35.0% |
| ! | AGCATTGAAGAGAAAAGCTA+AGG | - | chr1_2:68904334-68904353 | Msa0087870:intron | 35.0% |
| ! | TGGGTTTTCTCTTGTAATTC+AGG | - | chr1_2:68904410-68904429 | Msa0087870:intron | 35.0% |
| ! | GGGTTTTCTCTTGTAATTCA+GGG | - | chr1_2:68904411-68904430 | Msa0087870:intron | 35.0% |
| TAAAACTGTTATCAGTGCCT+GGG | - | chr1_2:68904437-68904456 | Msa0087870:intron | 35.0% | |
| !! | TAACACCAGTTGGTAAAAAC+TGG | + | chr1_2:68904507-68904526 | None:intergenic | 35.0% |
| AATATATAGATGGAGGGAAG+TGG | - | chr1_2:68904558-68904577 | Msa0087870:intron | 35.0% | |
| ATATATAGATGGAGGGAAGT+GGG | - | chr1_2:68904559-68904578 | Msa0087870:intron | 35.0% | |
| ATATTATGATCCCCTCTAGA+AGG | - | chr1_2:68904647-68904666 | Msa0087870:intron | 35.0% | |
| ATCACAAAAGTCCTTCTAGA+GGG | + | chr1_2:68904661-68904680 | None:intergenic | 35.0% | |
| AATCACAAAAGTCCTTCTAG+AGG | + | chr1_2:68904662-68904681 | None:intergenic | 35.0% | |
| GATCAAAATTCCTGGGATAA+GGG | - | chr1_2:68904685-68904704 | Msa0087870:intron | 35.0% | |
| ACAATTATGAACGGCAAAGA+CGG | - | chr1_2:68904733-68904752 | Msa0087870:intron | 35.0% | |
| GGAATGAGTTTACACTTTAC+AGG | + | chr1_2:68904802-68904821 | None:intergenic | 35.0% | |
| ! | GTTTTTCTCACTAAATTCGG+TGG | + | chr1_2:68904854-68904873 | None:intergenic | 35.0% |
| CCGAATTTAGTGAGAAAAAC+TGG | - | chr1_2:68904854-68904873 | Msa0087870:intron | 35.0% | |
| AAAAACTGGACACATTTCCA+TGG | - | chr1_2:68904868-68904887 | Msa0087870:intron | 35.0% | |
| TGATTTATACCTCAAGGACA+AGG | - | chr1_2:68905024-68905043 | Msa0087870:intron | 35.0% | |
| TTAGGTAACCACCCATAAAA+CGG | - | chr1_2:68905070-68905089 | Msa0087870:intron | 35.0% | |
| !!! | TTGTGCTTTATTTTCACAGC+TGG | + | chr1_2:68905130-68905149 | None:intergenic | 35.0% |
| AAGGGACAGAATTCTTATGA+TGG | - | chr1_2:68905179-68905198 | Msa0087870:intron | 35.0% | |
| ! | CAGAATTCTTATGATGGAGT+TGG | - | chr1_2:68905185-68905204 | Msa0087870:intron | 35.0% |
| TGATGGAGTTGGATGATAAA+TGG | - | chr1_2:68905196-68905215 | Msa0087870:intron | 35.0% | |
| GATGGAGTTGGATGATAAAT+GGG | - | chr1_2:68905197-68905216 | Msa0087870:intron | 35.0% | |
| AGATGCTCTGTGAATGAATT+GGG | - | chr1_2:68905248-68905267 | Msa0087870:intron | 35.0% | |
| TACAACTAGCACAAGGAATT+TGG | + | chr1_2:68905285-68905304 | None:intergenic | 35.0% | |
| AATGGAATACAACTAGCACA+AGG | + | chr1_2:68905292-68905311 | None:intergenic | 35.0% | |
| ! | ACTCTTTTCTCTGTGTACTT+TGG | - | chr1_2:68905313-68905332 | Msa0087870:intron | 35.0% |
| !!! | AACTCATTTTTTTGCAGAGG+AGG | + | chr1_2:68905447-68905466 | None:intergenic | 35.0% |
| AAGCTGCTAATGGAAATAAG+AGG | - | chr1_2:68905511-68905530 | Msa0087870:intron | 35.0% | |
| CATCAAAATAAATGCCACCA+AGG | - | chr1_2:68905760-68905779 | Msa0087870:CDS | 35.0% | |
| CAAATGACATGCTAATACCT+TGG | + | chr1_2:68905780-68905799 | None:intergenic | 35.0% | |
| ! | TGTCATTTGCTCTTATTTGC+TGG | - | chr1_2:68905791-68905810 | Msa0087870:intron | 35.0% |
| TCTGCCTTCTAAATCATAGT+AGG | - | chr1_2:68905823-68905842 | Msa0087870:intron | 35.0% | |
| AGAACGTATGCATCAGTTAA+TGG | + | chr1_2:68905871-68905890 | None:intergenic | 35.0% | |
| CTGTGATATCAGTCTATGAT+AGG | - | chr1_2:68905892-68905911 | Msa0087870:intron | 35.0% | |
| CGTACGAATTGATTGATTGA+GGG | + | chr1_2:68905991-68906010 | None:intergenic | 35.0% | |
| ACGTACGAATTGATTGATTG+AGG | + | chr1_2:68905992-68906011 | None:intergenic | 35.0% | |
| !! | GGTTGAGGTACTGATAAATA+AGG | + | chr1_2:68906408-68906427 | None:intergenic | 35.0% |
| GAAAGCTAAAAAACAGGTTG+AGG | + | chr1_2:68906423-68906442 | None:intergenic | 35.0% | |
| !!! | TCCCTTTATTTTTACTCACC+TGG | - | chr1_2:68906598-68906617 | Msa0087870:CDS | 35.0% |
| !!! | GTCTTGTTGTTTTCATTGCT+CGG | - | chr1_2:68906674-68906693 | Msa0087870:CDS | 35.0% |
| ! | TGTTTTCATTGCTCGGTAAT+TGG | - | chr1_2:68906681-68906700 | Msa0087870:CDS | 35.0% |
| ! | GTTTTCATTGCTCGGTAATT+GGG | - | chr1_2:68906682-68906701 | Msa0087870:CDS | 35.0% |
| CATAATCATTCTGTTTGCCT+TGG | - | chr1_2:68906764-68906783 | Msa0087870:intron | 35.0% | |
| ACTGTATCAAAATCAACTGC+AGG | + | chr1_2:68906811-68906830 | None:intergenic | 35.0% | |
| !! | TGCAGTTGATTTTGATACAG+TGG | - | chr1_2:68906810-68906829 | Msa0087870:intron | 35.0% |
| CAGCAGCATGAAATTAATGT+TGG | - | chr1_2:68906844-68906863 | Msa0087870:intron | 35.0% | |
| TGCGAAAATGAAAAATGCAC+TGG | + | chr1_2:68906893-68906912 | None:intergenic | 35.0% | |
| AATTTGGACTGCTAACTAAC+TGG | - | chr1_2:68906926-68906945 | Msa0087870:CDS | 35.0% | |
| TGAAATGCCTGGAAAAAGAA+AGG | + | chr1_2:68906979-68906998 | None:intergenic | 35.0% | |
| ! | CCAAATGAATTTGAAATGCC+TGG | + | chr1_2:68906990-68907009 | None:intergenic | 35.0% |
| CCAGGCATTTCAAATTCATT+TGG | - | chr1_2:68906987-68907006 | Msa0087870:CDS | 35.0% | |
| AGTTCTACAGCAAAAGTCTT+TGG | + | chr1_2:68907223-68907242 | None:intergenic | 35.0% | |
| ATGTAGCACGAAGATTTCAT+TGG | - | chr1_2:68907250-68907269 | Msa0087870:CDS | 35.0% | |
| !! | ATTGGTTTGGAGTTATACAG+CGG | - | chr1_2:68907268-68907287 | Msa0087870:CDS | 35.0% |
| AAATGACTGACACTCACTGA+CGG | + | chr1_2:68902095-68902114 | None:intergenic | 40.0% | |
| GTAATCACAACACGCTTCTT+TGG | + | chr1_2:68902304-68902323 | None:intergenic | 40.0% | |
| ! | AAGAAGCGTGTTGTGATTAC+TGG | - | chr1_2:68902304-68902323 | Msa0087870:three_prime_UTR | 40.0% |
| CGTGTTGTGATTACTGGTAT+GGG | - | chr1_2:68902310-68902329 | Msa0087870:three_prime_UTR | 40.0% | |
| TACTATGATAAGCTTCTCGC+TGG | - | chr1_2:68902367-68902386 | Msa0087870:exon | 40.0% | |
| !!! | GTTTTGGTTGGATCAGGAAT+GGG | - | chr1_2:68902706-68902725 | Msa0087870:intron | 40.0% |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr1_2:68903040-68903059 | Msa0087870:intron | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr1_2:68903047-68903066 | None:intergenic | 40.0% |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr1_2:68903047-68903066 | Msa0087870:intron | 40.0% | |
| !!! | TGATGGTTTTGTTATGGGAG+AGG | - | chr1_2:68903080-68903099 | Msa0087870:intron | 40.0% |
| !!! | GATGGTTTTGTTATGGGAGA+GGG | - | chr1_2:68903081-68903100 | Msa0087870:intron | 40.0% |
| TGATTAACAATATGGGGGGT+TGG | - | chr1_2:68903185-68903204 | Msa0087870:intron | 40.0% | |
| TTAACAATATGGGCAGCTCA+AGG | - | chr1_2:68903208-68903227 | Msa0087870:intron | 40.0% | |
| TAACAATATGGGCAGCTCAA+GGG | - | chr1_2:68903209-68903228 | Msa0087870:intron | 40.0% | |
| AAAACAGGACACACACAACA+TGG | + | chr1_2:68903564-68903583 | None:intergenic | 40.0% | |
| !! | CGAGAGTACTATAACTTCAC+AGG | - | chr1_2:68903619-68903638 | Msa0087870:intron | 40.0% |
| ATGACTGATCCAAGATCTGA+CGG | - | chr1_2:68903731-68903750 | Msa0087870:CDS | 40.0% | |
| ! | AGCAACAAAAAGTGTAAGCC+GGG | + | chr1_2:68903838-68903857 | None:intergenic | 40.0% |
| AAGGAAAAACATGCTGAAGG+AGG | + | chr1_2:68903918-68903937 | None:intergenic | 40.0% | |
| AGCAAACAGAAACGTAGAGT+CGG | + | chr1_2:68903946-68903965 | None:intergenic | 40.0% | |
| !!! | TGCTATTTTTCATGCATGCC+AGG | + | chr1_2:68904026-68904045 | None:intergenic | 40.0% |
| TAGCTGCTGCTATGTAGTTA+TGG | - | chr1_2:68904059-68904078 | Msa0087870:intron | 40.0% | |
| ! | TAAGGCCTCTAAAAAAGCCT+TGG | - | chr1_2:68904352-68904371 | Msa0087870:intron | 40.0% |
| ! | AAGGCCTCTAAAAAAGCCTT+GGG | - | chr1_2:68904353-68904372 | Msa0087870:intron | 40.0% |
| GAATGAAATTAGTCAGCCCA+AGG | + | chr1_2:68904372-68904391 | None:intergenic | 40.0% | |
| CTAAAACTGTTATCAGTGCC+TGG | - | chr1_2:68904436-68904455 | Msa0087870:intron | 40.0% | |
| ! | TTGGTCCAGTTTTTACCAAC+TGG | - | chr1_2:68904499-68904518 | Msa0087870:intron | 40.0% |
| !! | GTTTTGATGCCTTATACGAG+AGG | + | chr1_2:68904594-68904613 | None:intergenic | 40.0% |
| GGGGATCATAATATCTCATC+TGG | + | chr1_2:68904641-68904660 | None:intergenic | 40.0% | |
| ! | TCACAAAAGTCCTTCTAGAG+GGG | + | chr1_2:68904660-68904679 | None:intergenic | 40.0% |
| GGATCAAAATTCCTGGGATA+AGG | - | chr1_2:68904684-68904703 | Msa0087870:intron | 40.0% | |
| ! | ATTCCTGTTTCAGCCTTGTA+TGG | - | chr1_2:68904817-68904836 | Msa0087870:intron | 40.0% |
| GGTTTCATCTCTACCATACA+AGG | + | chr1_2:68904833-68904852 | None:intergenic | 40.0% | |
| !! | GGAAGGCATTGCTAATATTG+TGG | - | chr1_2:68904892-68904911 | Msa0087870:intron | 40.0% |
| CTGTGCGTGTTTGTATTCTT+AGG | - | chr1_2:68905052-68905071 | Msa0087870:intron | 40.0% | |
| TAGGTAACCACCCATAAAAC+GGG | - | chr1_2:68905071-68905090 | Msa0087870:intron | 40.0% | |
| ! | TGTTATACCCGTTTTATGGG+TGG | + | chr1_2:68905081-68905100 | None:intergenic | 40.0% |
| GAGATGCTCTGTGAATGAAT+TGG | - | chr1_2:68905247-68905266 | Msa0087870:intron | 40.0% | |
| ACTAGCACAAGGAATTTGGT+AGG | + | chr1_2:68905281-68905300 | None:intergenic | 40.0% | |
| !!! | TCATTTTTTTGCAGAGGAGG+CGG | + | chr1_2:68905444-68905463 | None:intergenic | 40.0% |
| TAATGAATGAGCGAGTAGCT+GGG | + | chr1_2:68905474-68905493 | None:intergenic | 40.0% | |
| !! | AAGGTTTTCAAGGACACTTC+TGG | - | chr1_2:68905737-68905756 | Msa0087870:CDS | 40.0% |
| ATGACATGCTAATACCTTGG+TGG | + | chr1_2:68905777-68905796 | None:intergenic | 40.0% | |
| TATGCATCAGTTAATGGCCA+TGG | + | chr1_2:68905865-68905884 | None:intergenic | 40.0% | |
| TCTATGATAGGTCACTGTCT+TGG | - | chr1_2:68905904-68905923 | Msa0087870:intron | 40.0% | |
| TGAAAGCCATAACAACAGGA+TGG | - | chr1_2:68905959-68905978 | Msa0087870:intron | 40.0% | |
| GTTAGAACCAAATGAGTGCT+CGG | - | chr1_2:68906056-68906075 | Msa0087870:intron | 40.0% | |
| TTAGAACCAAATGAGTGCTC+GGG | - | chr1_2:68906057-68906076 | Msa0087870:intron | 40.0% | |
| AGTGCTCGGGCATTTATTAT+TGG | - | chr1_2:68906070-68906089 | Msa0087870:intron | 40.0% | |
| TCCTCTCCATTTCTTCCATT+TGG | - | chr1_2:68906124-68906143 | Msa0087870:intron | 40.0% | |
| TCCAAATGGAAGAAATGGAG+AGG | + | chr1_2:68906128-68906147 | None:intergenic | 40.0% | |
| CAGCACAACAAAAAGAATCC+AGG | + | chr1_2:68906619-68906638 | None:intergenic | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr1_2:68906805-68906824 | None:intergenic | 40.0% | |
| !!! | TAACTGGCCTTTCTTTTTCC+AGG | - | chr1_2:68906969-68906988 | Msa0087870:CDS | 40.0% |
| TTTCTCTCTCTACGTCATTG+AGG | - | chr1_2:68907113-68907132 | Msa0087870:CDS | 40.0% | |
| !! | CAAAAGTCTTTGGAGCTAAC+TGG | + | chr1_2:68907213-68907232 | None:intergenic | 40.0% |
| ! | GCACGAAGATTTCATTGGTT+TGG | - | chr1_2:68907255-68907274 | Msa0087870:CDS | 40.0% |
| ! | AGTGTCGAGAGAGCTTATTT+AGG | - | chr1_2:68907297-68907316 | Msa0087870:exon | 40.0% |
| ! | GTACGAAGAAGGTGTGTGTA+AGG | + | chr1_2:68902069-68902088 | None:intergenic | 45.0% |
| TTGGAAGATTTACGGCGAAG+TGG | + | chr1_2:68902193-68902212 | None:intergenic | 45.0% | |
| ! | TGGCGGCATTGGAAGATTTA+CGG | + | chr1_2:68902201-68902220 | None:intergenic | 45.0% |
| !!! | AGTGACTCTCTTGGTTTTGG+CGG | + | chr1_2:68902230-68902249 | None:intergenic | 45.0% |
| ! | ACGAGTGACTCTCTTGGTTT+TGG | + | chr1_2:68902233-68902252 | None:intergenic | 45.0% |
| GCGTGTTGTGATTACTGGTA+TGG | - | chr1_2:68902309-68902328 | Msa0087870:three_prime_UTR | 45.0% | |
| TACTGGTATGGGTCTTGCTT+CGG | - | chr1_2:68902321-68902340 | Msa0087870:three_prime_UTR | 45.0% | |
| !! | AGCGAATCGAGTTGGGAATT+TGG | + | chr1_2:68902431-68902450 | None:intergenic | 45.0% |
| ! | AAATTCCCAACTCGATTCGC+TGG | - | chr1_2:68902430-68902449 | Msa0087870:CDS | 45.0% |
| ! | ATCCGTGACTTCAGTTCTGA+GGG | - | chr1_2:68902457-68902476 | Msa0087870:intron | 45.0% |
| AACCCTCAGAACTGAAGTCA+CGG | + | chr1_2:68902462-68902481 | None:intergenic | 45.0% | |
| !! | AGTTCTGAGGGTTACATCGA+CGG | - | chr1_2:68902469-68902488 | Msa0087870:intron | 45.0% |
| GGAGACAATCATCAAGTCTC+CGG | + | chr1_2:68902504-68902523 | None:intergenic | 45.0% | |
| ! | GGAGACTTGATGATTGTCTC+CGG | - | chr1_2:68902503-68902522 | Msa0087870:intron | 45.0% |
| GTGTTCGAGTGCTTTCTTAC+CGG | + | chr1_2:68902542-68902561 | None:intergenic | 45.0% | |
| !! | CGGTGCTGCAAATCTATCTA+AGG | - | chr1_2:68902570-68902589 | Msa0087870:intron | 45.0% |
| CAGATTGATAAGGAACGTGC+TGG | - | chr1_2:68902682-68902701 | Msa0087870:intron | 45.0% | |
| !!! | CGTTTTGGTTGGATCAGGAA+TGG | - | chr1_2:68902705-68902724 | Msa0087870:intron | 45.0% |
| CTCACCTCTACGAATGTGAT+TGG | + | chr1_2:68902926-68902945 | None:intergenic | 45.0% | |
| CAATCACATTCGTAGAGGTG+AGG | - | chr1_2:68902924-68902943 | Msa0087870:intron | 45.0% | |
| !! | GAGGCTGATTTGATGATAGC+CGG | - | chr1_2:68902943-68902962 | Msa0087870:intron | 45.0% |
| ! | CTGATTTGATGATAGCCGGT+GGG | - | chr1_2:68902947-68902966 | Msa0087870:intron | 45.0% |
| GAGGCTGCGATTATTCCAAT+TGG | - | chr1_2:68902973-68902992 | Msa0087870:intron | 45.0% | |
| ACGAAACCACCCAAACCAAT+TGG | + | chr1_2:68902991-68903010 | None:intergenic | 45.0% | |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr1_2:68903048-68903067 | None:intergenic | 45.0% |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr1_2:68903046-68903065 | Msa0087870:intron | 45.0% | |
| CCATCACGTTCTTTATCCCA+AGG | + | chr1_2:68903066-68903085 | None:intergenic | 45.0% | |
| CCTTGGGATAAAGAACGTGA+TGG | - | chr1_2:68903063-68903082 | Msa0087870:intron | 45.0% | |
| ! | TTTGTTATGGGAGAGGGTTC+TGG | - | chr1_2:68903087-68903106 | Msa0087870:intron | 45.0% |
| !!! | AGGGTTCTGGAGTTTTGGTT+AGG | - | chr1_2:68903100-68903119 | Msa0087870:intron | 45.0% |
| !! | TGGGGGGTTGGTTAACAATA+TGG | - | chr1_2:68903197-68903216 | Msa0087870:intron | 45.0% |
| !! | GGGGGGTTGGTTAACAATAT+GGG | - | chr1_2:68903198-68903217 | Msa0087870:intron | 45.0% |
| !! | TTCACAGGTATTGGAAAGCC+TGG | - | chr1_2:68903634-68903653 | Msa0087870:intron | 45.0% |
| GAATGAAACAGTACCTCCTC+AGG | + | chr1_2:68903809-68903828 | None:intergenic | 45.0% | |
| TGTGGTATGAGAGGGACTAT+GGG | - | chr1_2:68904237-68904256 | Msa0087870:intron | 45.0% | |
| !!! | TCAGCCCAAGGCTTTTTTAG+AGG | + | chr1_2:68904360-68904379 | None:intergenic | 45.0% |
| GTGTTAGAGCTCCCAATTGT+GGG | - | chr1_2:68904521-68904540 | Msa0087870:intron | 45.0% | |
| ! | ATAGCTCTGCCTCTCGTATA+AGG | - | chr1_2:68904582-68904601 | Msa0087870:intron | 45.0% |
| TTCCTGGGATAAGGGTTGAA+AGG | - | chr1_2:68904693-68904712 | Msa0087870:intron | 45.0% | |
| GGATAAGGGTTGAAAGGTGA+AGG | - | chr1_2:68904699-68904718 | Msa0087870:intron | 45.0% | |
| ! | CTCAGCTGAGTTGAGTTCTA+GGG | - | chr1_2:68904756-68904775 | Msa0087870:intron | 45.0% |
| CTACCATACAAGGCTGAAAC+AGG | + | chr1_2:68904823-68904842 | None:intergenic | 45.0% | |
| AACTGGACACATTTCCATGG+TGG | - | chr1_2:68904871-68904890 | Msa0087870:intron | 45.0% | |
| ATTAGCAATGCCTTCCACCA+TGG | + | chr1_2:68904888-68904907 | None:intergenic | 45.0% | |
| ACAGTTTCACCTTGTCCTTG+AGG | + | chr1_2:68905036-68905055 | None:intergenic | 45.0% | |
| GGAGTTGGATGATAAATGGG+AGG | - | chr1_2:68905200-68905219 | Msa0087870:intron | 45.0% | |
| TGGATGATAAATGGGAGGAG+AGG | - | chr1_2:68905205-68905224 | Msa0087870:intron | 45.0% | |
| TCTGTGAATGAATTGGGACC+CGG | - | chr1_2:68905254-68905273 | Msa0087870:intron | 45.0% | |
| CTAATGAATGAGCGAGTAGC+TGG | + | chr1_2:68905475-68905494 | None:intergenic | 45.0% | |
| CAGCTACTCGCTCATTCATT+AGG | - | chr1_2:68905473-68905492 | Msa0087870:intron | 45.0% | |
| TATGGGGCTTAAGCTGCTAA+TGG | - | chr1_2:68905501-68905520 | Msa0087870:intron | 45.0% | |
| TTCCACTCTTGCTGGTGATT+TGG | - | chr1_2:68905694-68905713 | Msa0087870:CDS | 45.0% | |
| TGTTGTTATGGCTTTCACCG+TGG | + | chr1_2:68905956-68905975 | None:intergenic | 45.0% | |
| ACGGTGAAAGCCATAACAAC+AGG | - | chr1_2:68905955-68905974 | Msa0087870:intron | 45.0% | |
| ATGCAGCCATCCTGTTGTTA+TGG | + | chr1_2:68905968-68905987 | None:intergenic | 45.0% | |
| TAAATGCCCGAGCACTCATT+TGG | + | chr1_2:68906066-68906085 | None:intergenic | 45.0% | |
| AATGGAGAGGATCTTGACTC+AGG | + | chr1_2:68906115-68906134 | None:intergenic | 45.0% | |
| GACAGAAGGAGTAACGAGTA+AGG | + | chr1_2:68906295-68906314 | None:intergenic | 45.0% | |
| TCATTGCTCGGTAATTGGGA+TGG | - | chr1_2:68906686-68906705 | Msa0087870:CDS | 45.0% | |
| GGATTCTACACTCAAGACCA+AGG | + | chr1_2:68906784-68906803 | None:intergenic | 45.0% | |
| ACATGAAGAGAAGACAAGCC+TGG | + | chr1_2:68907065-68907084 | None:intergenic | 45.0% | |
| ! | ACTGACGGAGAGTACGAAGA+AGG | + | chr1_2:68902080-68902099 | None:intergenic | 50.0% |
| GGAGATACGAGTGACTCTCT+TGG | + | chr1_2:68902239-68902258 | None:intergenic | 50.0% | |
| ! | ATCCTTTTCTCTTTGCGGCG+CGG | + | chr1_2:68902281-68902300 | None:intergenic | 50.0% |
| !! | ATGGGTCTTGCTTCGGTGTT+TGG | - | chr1_2:68902328-68902347 | Msa0087870:three_prime_UTR | 50.0% |
| TCTGACCAGCGAATCGAGTT+GGG | + | chr1_2:68902438-68902457 | None:intergenic | 50.0% | |
| ATCTGACCAGCGAATCGAGT+TGG | + | chr1_2:68902439-68902458 | None:intergenic | 50.0% | |
| GATCCGTGACTTCAGTTCTG+AGG | - | chr1_2:68902456-68902475 | Msa0087870:intron | 50.0% | |
| !! | GTTCTGAGGGTTACATCGAC+GGG | - | chr1_2:68902470-68902489 | Msa0087870:intron | 50.0% |
| ACATCGACGGGAAGAATGAC+CGG | - | chr1_2:68902482-68902501 | Msa0087870:intron | 50.0% | |
| GCACTCGAACACGCTAATCT+CGG | - | chr1_2:68902550-68902569 | Msa0087870:intron | 50.0% | |
| !! | TAAGGAACGTGCTGGCGTTT+TGG | - | chr1_2:68902690-68902709 | Msa0087870:intron | 50.0% |
| TTGGTTGGATCAGGAATGGG+TGG | - | chr1_2:68902709-68902728 | Msa0087870:intron | 50.0% | |
| GCTGCCAATCACATTCGTAG+AGG | - | chr1_2:68902919-68902938 | Msa0087870:intron | 50.0% | |
| !! | GCTGATTTGATGATAGCCGG+TGG | - | chr1_2:68902946-68902965 | Msa0087870:intron | 50.0% |
| TATGGGCAGCTCAAGGGTTA+AGG | - | chr1_2:68903215-68903234 | Msa0087870:intron | 50.0% | |
| CAGCTCAAGGGTTAAGGTGT+TGG | - | chr1_2:68903221-68903240 | Msa0087870:intron | 50.0% | |
| !! | CTCAAGGGTTAAGGTGTTGG+AGG | - | chr1_2:68903224-68903243 | Msa0087870:intron | 50.0% |
| TGCACCGGGATCATGTACAA+AGG | + | chr1_2:68903436-68903455 | None:intergenic | 50.0% | |
| ACTAGATCTCCCGCATATGC+AGG | - | chr1_2:68903455-68903474 | Msa0087870:CDS | 50.0% | |
| CTAGATCTCCCGCATATGCA+GGG | - | chr1_2:68903456-68903475 | Msa0087870:CDS | 50.0% | |
| TTCCTAGACCCTGCATATGC+GGG | + | chr1_2:68903467-68903486 | None:intergenic | 50.0% | |
| CTTCCTAGACCCTGCATATG+CGG | + | chr1_2:68903468-68903487 | None:intergenic | 50.0% | |
| GCATATGCAGGGTCTAGGAA+GGG | - | chr1_2:68903467-68903486 | Msa0087870:CDS | 50.0% | |
| CATATGCAGGGTCTAGGAAG+GGG | - | chr1_2:68903468-68903487 | Msa0087870:CDS | 50.0% | |
| AATAGGTGCACCTCGCTTCA+TGG | + | chr1_2:68903666-68903685 | None:intergenic | 50.0% | |
| !! | GATCCAAGATCTGACGGACT+CGG | - | chr1_2:68903737-68903756 | Msa0087870:CDS | 50.0% |
| AAACGTAGAGTCGGCCAGAA+AGG | + | chr1_2:68903937-68903956 | None:intergenic | 50.0% | |
| CGATACAATAGGGGATGACC+TGG | - | chr1_2:68904005-68904024 | Msa0087870:intron | 50.0% | |
| TGTTGGGGTGTGGTATGAGA+GGG | - | chr1_2:68904229-68904248 | Msa0087870:intron | 50.0% | |
| GTGTGGTATGAGAGGGACTA+TGG | - | chr1_2:68904236-68904255 | Msa0087870:intron | 50.0% | |
| TATGAGAGGGACTATGGGTC+TGG | - | chr1_2:68904242-68904261 | Msa0087870:intron | 50.0% | |
| ! | TTGGGAGCTCTAACACCAGT+TGG | + | chr1_2:68904517-68904536 | None:intergenic | 50.0% |
| GGTGTTAGAGCTCCCAATTG+TGG | - | chr1_2:68904520-68904539 | Msa0087870:intron | 50.0% | |
| CGTTTGCAGCTCCCACAATT+GGG | + | chr1_2:68904535-68904554 | None:intergenic | 50.0% | |
| TCGTTTGCAGCTCCCACAAT+TGG | + | chr1_2:68904536-68904555 | None:intergenic | 50.0% | |
| CACCTTTCAACCCTTATCCC+AGG | + | chr1_2:68904698-68904717 | None:intergenic | 50.0% | |
| ! | GCTCAGCTGAGTTGAGTTCT+AGG | - | chr1_2:68904755-68904774 | Msa0087870:intron | 50.0% |
| ! | GGACACATTTCCATGGTGGA+AGG | - | chr1_2:68904875-68904894 | Msa0087870:intron | 50.0% |
| ACAATTGCTTGCACGCAGCA+GGG | - | chr1_2:68905146-68905165 | Msa0087870:intron | 50.0% | |
| GGGAGGAGAGGAAAGAGAAA+AGG | - | chr1_2:68905217-68905236 | Msa0087870:intron | 50.0% | |
| CTGTGAATGAATTGGGACCC+GGG | - | chr1_2:68905255-68905274 | Msa0087870:intron | 50.0% | |
| ACAAGGAATTTGGTAGGCCC+GGG | + | chr1_2:68905275-68905294 | None:intergenic | 50.0% | |
| CACAAGGAATTTGGTAGGCC+CGG | + | chr1_2:68905276-68905295 | None:intergenic | 50.0% | |
| CATGCAACTTCCACTCTTGC+TGG | - | chr1_2:68905686-68905705 | Msa0087870:CDS | 50.0% | |
| ! | CACTCTTGCTGGTGATTTGG+CGG | - | chr1_2:68905697-68905716 | Msa0087870:CDS | 50.0% |
| GGGTTTGGAAGCTATTGCCA+CGG | - | chr1_2:68905936-68905955 | Msa0087870:intron | 50.0% | |
| TGTGGGTCCTACCACTAAGT+GGG | + | chr1_2:68906206-68906225 | None:intergenic | 50.0% | |
| ATGTGGGTCCTACCACTAAG+TGG | + | chr1_2:68906207-68906226 | None:intergenic | 50.0% | |
| !! | TCGTGGCTTTTTCCGCTTTC+AGG | - | chr1_2:68907030-68907049 | Msa0087870:CDS | 50.0% |
| GAAGACAAGCCTGGCAATCA+GGG | + | chr1_2:68907056-68907075 | None:intergenic | 50.0% | |
| AGAAGACAAGCCTGGCAATC+AGG | + | chr1_2:68907057-68907076 | None:intergenic | 50.0% | |
| TTACGGCGAAGTGGTTCGAG+CGG | + | chr1_2:68902184-68902203 | None:intergenic | 55.0% | |
| !!! | GACTCTCTTGGTTTTGGCGG+CGG | + | chr1_2:68902227-68902246 | None:intergenic | 55.0% |
| AAGCTTCTCGCTGGTGAGAG+TGG | - | chr1_2:68902376-68902395 | Msa0087870:exon | 55.0% | |
| TACCGGCGACAATGCAGTAC+CGG | + | chr1_2:68902525-68902544 | None:intergenic | 55.0% | |
| !! | GAACGTGCTGGCGTTTTGGT+TGG | - | chr1_2:68902694-68902713 | Msa0087870:intron | 55.0% |
| !!! | GCTGGCGTTTTGGTTGGATC+AGG | - | chr1_2:68902700-68902719 | Msa0087870:intron | 55.0% |
| TGGGTGGTTTCGTTGCTTGC+AGG | - | chr1_2:68902998-68903017 | Msa0087870:intron | 55.0% | |
| GGGTGGTTTCGTTGCTTGCA+GGG | - | chr1_2:68902999-68903018 | Msa0087870:intron | 55.0% | |
| !!! | GGGAGAGGGTTCTGGAGTTT+TGG | - | chr1_2:68903095-68903114 | Msa0087870:intron | 55.0% |
| ATGCGGGAGATCTAGTGCAC+CGG | + | chr1_2:68903451-68903470 | None:intergenic | 55.0% | |
| CGCATATGCAGGGTCTAGGA+AGG | - | chr1_2:68903466-68903485 | Msa0087870:CDS | 55.0% | |
| CTCGCTTCATGGCATGTTCC+AGG | + | chr1_2:68903655-68903674 | None:intergenic | 55.0% | |
| CTGGAACATGCCATGAAGCG+AGG | - | chr1_2:68903653-68903672 | Msa0087870:intron | 55.0% | |
| CAGAGCAGCCTTGAAGATGC+CGG | - | chr1_2:68903776-68903795 | Msa0087870:intron | 55.0% | |
| GAGACACACCGGCATCTTCA+AGG | + | chr1_2:68903787-68903806 | None:intergenic | 55.0% | |
| TACCTCCTCAGGAGACACAC+CGG | + | chr1_2:68903798-68903817 | None:intergenic | 55.0% | |
| TGTGAAGCGGTCTGCACACA+TGG | - | chr1_2:68904206-68904225 | Msa0087870:intron | 55.0% | |
| CGGTCTGCACACATGGTGTT+GGG | - | chr1_2:68904213-68904232 | Msa0087870:intron | 55.0% | |
| ! | GGTCTGCACACATGGTGTTG+GGG | - | chr1_2:68904214-68904233 | Msa0087870:intron | 55.0% |
| GTGTTGGGGTGTGGTATGAG+AGG | - | chr1_2:68904228-68904247 | Msa0087870:intron | 55.0% | |
| CACAATTGCTTGCACGCAGC+AGG | - | chr1_2:68905145-68905164 | Msa0087870:intron | 55.0% | |
| CAATTGCTTGCACGCAGCAG+GGG | - | chr1_2:68905147-68905166 | Msa0087870:intron | 55.0% | |
| AATTGCTTGCACGCAGCAGG+GGG | - | chr1_2:68905148-68905167 | Msa0087870:intron | 55.0% | |
| CGCCAAATCACCAGCAAGAG+TGG | + | chr1_2:68905699-68905718 | None:intergenic | 55.0% | |
| ! | GTCACTGTCTTGGTGCAGCT+GGG | - | chr1_2:68905914-68905933 | Msa0087870:intron | 55.0% |
| ! | TCACTGTCTTGGTGCAGCTG+GGG | - | chr1_2:68905915-68905934 | Msa0087870:intron | 55.0% |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr1_2:68907013-68907032 | Msa0087870:CDS | 55.0% |
| TGGCAATCAGGGCCTGAAAG+CGG | + | chr1_2:68907045-68907064 | None:intergenic | 55.0% | |
| GGTGAAGGACGGAGAGTGGA+GGG | + | chr1_2:68902163-68902182 | None:intergenic | 60.0% | |
| GTGGTTCGAGCGGTGAAGGA+CGG | + | chr1_2:68902174-68902193 | None:intergenic | 60.0% | |
| CGAAGTGGTTCGAGCGGTGA+AGG | + | chr1_2:68902178-68902197 | None:intergenic | 60.0% | |
| !!! | TCTCTTGGTTTTGGCGGCGG+AGG | + | chr1_2:68902224-68902243 | None:intergenic | 60.0% |
| AGTCACTCGTATCTCCGCCG+CGG | - | chr1_2:68902243-68902262 | Msa0087870:three_prime_UTR | 60.0% | |
| ! | CTTTTCTCTTTGCGGCGCGG+TGG | + | chr1_2:68902278-68902297 | None:intergenic | 60.0% |
| CACCGCGCCGCAAAGAGAAA+AGG | - | chr1_2:68902276-68902295 | Msa0087870:three_prime_UTR | 60.0% | |
| CTCCGGTACTGCATTGTCGC+CGG | - | chr1_2:68902520-68902539 | Msa0087870:intron | 60.0% | |
| GATGATAGCCGGTGGGACTG+AGG | - | chr1_2:68902954-68902973 | Msa0087870:intron | 60.0% | |
| AATCGCAGCCTCAGTCCCAC+CGG | + | chr1_2:68902965-68902984 | None:intergenic | 60.0% | |
| TGCGGGAGATCTAGTGCACC+GGG | + | chr1_2:68903450-68903469 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+AGG | - | chr1_2:68903462-68903481 | Msa0087870:CDS | 60.0% | |
| ACGCCGAGTCCGTCAGATCT+TGG | + | chr1_2:68903743-68903762 | None:intergenic | 60.0% | |
| CGGCATCTTCAAGGCTGCTC+TGG | + | chr1_2:68903778-68903797 | None:intergenic | 60.0% | |
| AGATGCCGGTGTGTCTCCTG+AGG | - | chr1_2:68903790-68903809 | Msa0087870:intron | 60.0% | |
| GCGGTCTGCACACATGGTGT+TGG | - | chr1_2:68904212-68904231 | Msa0087870:intron | 60.0% | |
| ! | GCACACATGGTGTTGGGGTG+TGG | - | chr1_2:68904219-68904238 | Msa0087870:intron | 60.0% |
| ! | GGTCACTGTCTTGGTGCAGC+TGG | - | chr1_2:68905913-68905932 | Msa0087870:intron | 60.0% |
| ! | CACTGTCTTGGTGCAGCTGG+GGG | - | chr1_2:68905916-68905935 | Msa0087870:intron | 60.0% |
| ! | TCTTGGTGCAGCTGGGGGTT+TGG | - | chr1_2:68905921-68905940 | Msa0087870:intron | 60.0% |
| !! | CGATGGTGGGACCCACTTAG+TGG | - | chr1_2:68906192-68906211 | Msa0087870:intron | 60.0% |
| GGTGGGACCCACTTAGTGGT+AGG | - | chr1_2:68906196-68906215 | Msa0087870:intron | 60.0% | |
| GCTTTCAGGCCCTGATTGCC+AGG | - | chr1_2:68907044-68907063 | Msa0087870:CDS | 60.0% | |
| CGGTGAAGGACGGAGAGTGG+AGG | + | chr1_2:68902164-68902183 | None:intergenic | 65.0% | |
| GAGCGGTGAAGGACGGAGAG+TGG | + | chr1_2:68902167-68902186 | None:intergenic | 65.0% | |
| !!! | CTTGGTTTTGGCGGCGGAGG+TGG | + | chr1_2:68902221-68902240 | None:intergenic | 65.0% |
| TTCTCTTTGCGGCGCGGTGG+TGG | + | chr1_2:68902275-68902294 | None:intergenic | 65.0% | |
| TGCCGGTGTGTCTCCTGAGG+AGG | - | chr1_2:68903793-68903812 | Msa0087870:intron | 65.0% | |
| ! | TTGCACGCAGCAGGGGGTGT+GGG | - | chr1_2:68905154-68905173 | Msa0087870:intron | 65.0% |
| ! | CAGCAGGGGGTGTGGGGAAA+GGG | - | chr1_2:68905161-68905180 | Msa0087870:intron | 65.0% |
| !! | GGTTTTGGCGGCGGAGGTGG+CGG | + | chr1_2:68902218-68902237 | None:intergenic | 70.0% |
| ! | TCTTTGCGGCGCGGTGGTGG+TGG | + | chr1_2:68902272-68902291 | None:intergenic | 70.0% |
| CTTGCACGCAGCAGGGGGTG+TGG | - | chr1_2:68905153-68905172 | Msa0087870:intron | 70.0% | |
| ! | TGCACGCAGCAGGGGGTGTG+GGG | - | chr1_2:68905155-68905174 | Msa0087870:intron | 70.0% |
| ! | GCAGCAGGGGGTGTGGGGAA+AGG | - | chr1_2:68905160-68905179 | Msa0087870:intron | 70.0% |
| !! | GGTGGTGGTGGTGACCGCGG+CGG | + | chr1_2:68902260-68902279 | None:intergenic | 75.0% |
| !! | CGCGGTGGTGGTGGTGACCG+CGG | + | chr1_2:68902263-68902282 | None:intergenic | 75.0% |
| !! | GGCGGCGGAGGTGGCGGCAT+TGG | + | chr1_2:68902212-68902231 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 68901966 | 68907478 | 68901966 | ID=Msa0087870;Name=Msa0087870 |
| chr1_2 | mRNA | 68901966 | 68907478 | 68901966 | ID=Msa0087870-mRNA-1;Parent=Msa0087870;Name=Msa0087870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|1|1|1|1|1|7|420|472 |
| chr1_2 | exon | 68901966 | 68902453 | 68901966 | ID=Msa0087870-mRNA-1:exon:23630;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68902579 | 68902645 | 68902579 | ID=Msa0087870-mRNA-1:exon:23629;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68903439 | 68903540 | 68903439 | ID=Msa0087870-mRNA-1:exon:23628;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68903663 | 68903776 | 68903663 | ID=Msa0087870-mRNA-1:exon:23627;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68905630 | 68905803 | 68905630 | ID=Msa0087870-mRNA-1:exon:23626;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68906328 | 68906759 | 68906328 | ID=Msa0087870-mRNA-1:exon:23625;Parent=Msa0087870-mRNA-1 |
| chr1_2 | exon | 68906853 | 68907478 | 68906853 | ID=Msa0087870-mRNA-1:exon:23624;Parent=Msa0087870-mRNA-1 |
| chr1_2 | five_prime_UTR | 68907315 | 68907478 | 68907315 | ID=Msa0087870-mRNA-1:five_prime_utr;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68906853 | 68907314 | 68906853 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68906328 | 68906759 | 68906328 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68905630 | 68905803 | 68905630 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68903663 | 68903776 | 68903663 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68903439 | 68903540 | 68903439 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68902579 | 68902645 | 68902579 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | CDS | 68902386 | 68902453 | 68902386 | ID=Msa0087870-mRNA-1:cds;Parent=Msa0087870-mRNA-1 |
| chr1_2 | three_prime_UTR | 68901966 | 68902385 | 68901966 | ID=Msa0087870-mRNA-1:three_prime_utr;Parent=Msa0087870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
