Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475840 | XP_013469773.1 | 99.153 | 472 | 4 | 0 | 1 | 472 | 1 | 472 | 0.0 | 967 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475840 | sp|P52410|KASC1_ARATH | 82.636 | 478 | 72 | 3 | 1 | 472 | 1 | 473 | 0.0 | 815 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475840 | A0A072VQ81 | 99.153 | 472 | 4 | 0 | 1 | 472 | 1 | 472 | 0.0 | 967 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040180 | Msa0475840 | 0.896827 | 2.538894e-76 | -8.615850e-47 |
| Msa0078240 | Msa0475840 | 0.803036 | 4.222108e-49 | -8.615850e-47 |
| Msa0087870 | Msa0475840 | 0.817064 | 4.002744e-52 | -8.615850e-47 |
| Msa0374240 | Msa0475840 | 0.851688 | 7.542273e-61 | -8.615850e-47 |
| Msa0469800 | Msa0475840 | 0.817582 | 3.060976e-52 | -8.615850e-47 |
| Msa0469810 | Msa0475840 | 0.854694 | 1.037839e-61 | -8.615850e-47 |
| Msa0475840 | Msa0515360 | 0.831294 | 1.810640e-55 | -8.615850e-47 |
| Msa0475840 | Msa0552710 | 0.813293 | 2.754301e-51 | -8.615850e-47 |
| Msa0475840 | Msa1463250 | 0.856270 | 3.604981e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475840 | MtrunA17_Chr1g0204841 | 99.153 | 472 | 4 | 0 | 1 | 472 | 1 | 472 | 0.0 | 967 |
| Msa0475840 | MtrunA17_Chr4g0052121 | 82.737 | 475 | 70 | 6 | 1 | 472 | 1 | 466 | 0.0 | 765 |
| Msa0475840 | MtrunA17_Chr8g0388511 | 74.674 | 383 | 97 | 0 | 45 | 427 | 2 | 384 | 0.0 | 618 |
| Msa0475840 | MtrunA17_Chr2g0301361 | 56.195 | 452 | 192 | 4 | 22 | 471 | 41 | 488 | 3.64e-176 | 503 |
| Msa0475840 | MtrunA17_Chr4g0070171 | 58.000 | 400 | 166 | 2 | 73 | 471 | 93 | 491 | 5.46e-170 | 487 |
| Msa0475840 | MtrunA17_Chr8g0388531 | 70.476 | 210 | 62 | 0 | 31 | 240 | 16 | 225 | 9.33e-105 | 311 |
| Msa0475840 | MtrunA17_Chr8g0388551 | 54.198 | 262 | 68 | 2 | 31 | 292 | 8 | 217 | 6.06e-93 | 285 |
| Msa0475840 | MtrunA17_Chr1g0183091 | 38.479 | 434 | 240 | 7 | 60 | 468 | 37 | 468 | 5.78e-90 | 282 |
| Msa0475840 | MtrunA17_Chr8g0388561 | 71.676 | 173 | 46 | 1 | 300 | 472 | 1 | 170 | 1.56e-87 | 265 |
| Msa0475840 | MtrunA17_Chr8g0388541 | 81.690 | 71 | 13 | 0 | 357 | 427 | 55 | 125 | 1.57e-34 | 125 |
| Msa0475840 | MtrunA17_Chr8g0388541 | 62.500 | 72 | 27 | 0 | 245 | 316 | 1 | 72 | 3.87e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475840 | AT5G46290.1 | 82.636 | 478 | 72 | 3 | 1 | 472 | 1 | 473 | 0.0 | 815 |
| Msa0475840 | AT5G46290.3 | 79.960 | 494 | 72 | 4 | 1 | 472 | 1 | 489 | 0.0 | 805 |
| Msa0475840 | AT5G46290.2 | 70.921 | 478 | 73 | 5 | 1 | 472 | 1 | 418 | 0.0 | 667 |
| Msa0475840 | AT1G74960.1 | 52.967 | 455 | 203 | 3 | 27 | 471 | 88 | 541 | 1.02e-169 | 489 |
| Msa0475840 | AT1G74960.3 | 52.967 | 455 | 203 | 3 | 27 | 471 | 88 | 541 | 1.02e-169 | 489 |
| Msa0475840 | AT1G74960.2 | 52.967 | 455 | 203 | 3 | 27 | 471 | 88 | 541 | 1.02e-169 | 489 |
| Msa0475840 | AT2G04540.1 | 38.391 | 435 | 238 | 9 | 60 | 469 | 31 | 460 | 1.56e-82 | 263 |
Find 142 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTATTATTGCTGAATATT+TGG | 0.107826 | 3_3:+79338427 | Msa0475840:CDS |
| TCCTTATGCTATTACAAATA+TGG | 0.113394 | 3_3:+79337609 | Msa0475840:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 3_3:+79337637 | Msa0475840:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 3_3:-79337670 | None:intergenic |
| TTCTTCTACATTGGAAATTT+CGG | 0.228440 | 3_3:-79336766 | None:intergenic |
| AGCGAATCGAGTTGGGAATT+TGG | 0.237235 | 3_3:-79337233 | None:intergenic |
| GGGAGAAGGTTCTGGAGTTT+TGG | 0.264837 | 3_3:+79337900 | Msa0475840:CDS |
| TTTGTTATGGGAGAAGGTTC+TGG | 0.272709 | 3_3:+79337892 | Msa0475840:CDS |
| GACAAGTTGTTATTAATCTT+TGG | 0.273076 | 3_3:-79336822 | None:intergenic |
| CTCGCTTCATGGCATGTTCC+AGG | 0.286379 | 3_3:-79338400 | None:intergenic |
| CCTATTATTGCTGAATATTT+GGG | 0.287910 | 3_3:+79338428 | Msa0475840:CDS |
| TGCGATTATTCCAATTGGTT+TGG | 0.288023 | 3_3:+79337783 | Msa0475840:CDS |
| AGTTCTACAGCAAAAGTCTT+TGG | 0.290799 | 3_3:-79341960 | None:intergenic |
| GTAATCACAACACGCTTCTT+TGG | 0.291528 | 3_3:-79337106 | None:intergenic |
| TATATCTTTAATTAACAATA+AGG | 0.294362 | 3_3:-79342067 | None:intergenic |
| ACGAGTGAGTCTCTTGGTTT+TGG | 0.296032 | 3_3:-79337035 | None:intergenic |
| TTCCACTCTTGCTGGTGATT+TGG | 0.297104 | 3_3:+79340442 | Msa0475840:CDS |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 3_3:+79337845 | Msa0475840:CDS |
| CCAGGCATTTCAAATTCATT+TGG | 0.314348 | 3_3:+79341726 | Msa0475840:intron |
| CCTTATGCTATTACAAATAT+GGG | 0.317643 | 3_3:+79337610 | Msa0475840:CDS |
| ATTTCAAATTCATTTGGATT+TGG | 0.319137 | 3_3:+79341732 | Msa0475840:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 3_3:-79341532 | None:intergenic |
| TGGGTGGTTTCGTTGCTTGC+AGG | 0.323684 | 3_3:+79337803 | Msa0475840:CDS |
| CCCAAATATTCAGCAATAAT+AGG | 0.335330 | 3_3:-79338428 | None:intergenic |
| GTTAAGAATTTGATTGAAAA+GGG | 0.338451 | 3_3:+79337559 | Msa0475840:CDS |
| GCGATTATTCCAATTGGTTT+GGG | 0.344160 | 3_3:+79337784 | Msa0475840:CDS |
| ATGGGTCTTGCTTCGGTGTT+TGG | 0.344743 | 3_3:+79337133 | Msa0475840:CDS |
| GGAGATTAATGCTATCAAAA+AGG | 0.351656 | 3_3:+79340466 | Msa0475840:CDS |
| AGCATATAATGAACAATTAC+AGG | 0.353040 | 3_3:-79341915 | None:intergenic |
| AAGAAGCGTGTTGTGATTAC+TGG | 0.354759 | 3_3:+79337109 | Msa0475840:CDS |
| GCACGAAGATTTCATTGGTT+TGG | 0.355311 | 3_3:+79341995 | Msa0475840:three_prime_UTR |
| CGGTGCTGCAAATCTATCTA+AGG | 0.355647 | 3_3:+79337375 | Msa0475840:CDS |
| GGCGGCGGAGGTGGCGGCAT+TGG | 0.361340 | 3_3:-79337014 | None:intergenic |
| ATGCAGCCATCCTGTTGTTA+TGG | 0.364668 | 3_3:-79340713 | None:intergenic |
| AATATGGGTTCAGCTTTACT+TGG | 0.368154 | 3_3:+79337625 | Msa0475840:CDS |
| GCTTTCAGGCCCTGATTGCC+AGG | 0.377973 | 3_3:+79341783 | Msa0475840:exon |
| TGGCGGCATTGGAGGATTTA+CGG | 0.381506 | 3_3:-79337003 | None:intergenic |
| CACTCTTGCTGGTGATTTGG+CGG | 0.382291 | 3_3:+79340445 | Msa0475840:CDS |
| CAAAAGTCTTTGGAGCTAAC+TGG | 0.385274 | 3_3:-79341950 | None:intergenic |
| AGTTAAGAATTTGATTGAAA+AGG | 0.392053 | 3_3:+79337558 | Msa0475840:CDS |
| TAAGGAACGTGCTGGCGTTT+TGG | 0.393874 | 3_3:+79337495 | Msa0475840:CDS |
| CGGCATCTTCAAGGCTGCTC+TGG | 0.394560 | 3_3:-79338523 | None:intergenic |
| TTCTCTTTGCGGCGCGGTGG+TGG | 0.395427 | 3_3:-79337077 | None:intergenic |
| AATAGGTGCACCTCGCTTCA+TGG | 0.395532 | 3_3:-79338411 | None:intergenic |
| TACTGGTATGGGTCTTGCTT+CGG | 0.410766 | 3_3:+79337126 | Msa0475840:CDS |
| TCTTGTTATTGAATTGTTGT+CGG | 0.410900 | 3_3:+79342111 | Msa0475840:three_prime_UTR |
| AGAAGACAAGCCTGGCAATC+AGG | 0.414753 | 3_3:-79341793 | None:intergenic |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 3_3:+79337851 | Msa0475840:CDS |
| CATGCAACTTCCACTCTTGC+TGG | 0.426755 | 3_3:+79340434 | Msa0475840:CDS |
| TCTGACCAGCGAATCGAGTT+GGG | 0.430793 | 3_3:-79337240 | None:intergenic |
| TCTTGGTGCAGCTGGCGGTT+TGG | 0.431148 | 3_3:+79340669 | Msa0475840:CDS |
| GGCGGAGGTGGCGGCATTGG+AGG | 0.431622 | 3_3:-79337011 | None:intergenic |
| TCAAATTCATTTGGATTTGG+TGG | 0.432807 | 3_3:+79341735 | Msa0475840:CDS |
| CCCATATTTGTAATAGCATA+AGG | 0.436887 | 3_3:-79337610 | None:intergenic |
| ACGCCGAGTCCGTCAGATCT+TGG | 0.446626 | 3_3:-79338488 | None:intergenic |
| ACGAAACCACCCAAACCAAT+TGG | 0.448666 | 3_3:-79337793 | None:intergenic |
| CTCACCTCTACGAATGTGAT+TGG | 0.450144 | 3_3:-79337728 | None:intergenic |
| CGTACGAATTGATTGATTGA+GGG | 0.453619 | 3_3:-79340736 | None:intergenic |
| GTGTTCGAGTGCTTTCTTAC+CGG | 0.460627 | 3_3:-79337344 | None:intergenic |
| AGTGTCGAGAGAGCTTATTT+AGG | 0.462874 | 3_3:+79342037 | Msa0475840:three_prime_UTR |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 3_3:+79337852 | Msa0475840:CDS |
| TTCACAGGTATTGGAAAGCC+TGG | 0.471523 | 3_3:+79338382 | Msa0475840:intron |
| GGTCACTGTCTTGGTGCAGC+TGG | 0.473319 | 3_3:+79340661 | Msa0475840:CDS |
| ATGTAGCACGAAGATTTCAT+TGG | 0.475677 | 3_3:+79341990 | Msa0475840:three_prime_UTR |
| GATCCGTGACTTCAGTTCTG+AGG | 0.481182 | 3_3:+79337261 | Msa0475840:CDS |
| GAGACACACCGGCATCTTCA+AGG | 0.486243 | 3_3:-79338532 | None:intergenic |
| GCGTGTTGTGATTACTGGTA+TGG | 0.487195 | 3_3:+79337114 | Msa0475840:CDS |
| CTGTGATATCAGTCTATGAT+AGG | 0.488568 | 3_3:+79340640 | Msa0475840:intron |
| CACCGCGCCGCAAAGAGAAA+AGG | 0.488817 | 3_3:+79337081 | Msa0475840:CDS |
| CGCCAAATCACCAGCAAGAG+TGG | 0.490695 | 3_3:-79340444 | None:intergenic |
| CACTGTCTTGGTGCAGCTGG+CGG | 0.498846 | 3_3:+79340664 | Msa0475840:CDS |
| GAGGCTGCGATTATTCCAAT+TGG | 0.500761 | 3_3:+79337778 | Msa0475840:CDS |
| ACGTACGAATTGATTGATTG+AGG | 0.504368 | 3_3:-79340737 | None:intergenic |
| ACGGTGAAAGCCATAACAAC+AGG | 0.505006 | 3_3:+79340703 | Msa0475840:CDS |
| ATCTGACCAGCGAATCGAGT+TGG | 0.506976 | 3_3:-79337241 | None:intergenic |
| GAATGAAACAGTACCTCCTC+AGG | 0.510763 | 3_3:-79338554 | None:intergenic |
| CGAAGTGGTTCGAGCGGTGA+AGG | 0.511174 | 3_3:-79336980 | None:intergenic |
| GGGTGGTTTCGTTGCTTGCA+GGG | 0.511680 | 3_3:+79337804 | Msa0475840:CDS |
| AAATTCCCAACTCGATTCGC+TGG | 0.512075 | 3_3:+79337235 | Msa0475840:CDS |
| GAAGACAAGCCTGGCAATCA+GGG | 0.514627 | 3_3:-79341792 | None:intergenic |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 3_3:+79341574 | Msa0475840:CDS |
| TCTTTGCGGCGCGGTGGTGG+TGG | 0.521161 | 3_3:-79337074 | None:intergenic |
| GGAAGCATCAAATCTATCAA+TGG | 0.528121 | 3_3:-79337212 | None:intergenic |
| GAGCGGTGAAGGACGGAGAG+TGG | 0.530454 | 3_3:-79336969 | None:intergenic |
| TACCGGCGACAATGCAGTAC+CGG | 0.534477 | 3_3:-79337327 | None:intergenic |
| CTCCGGTACTGCATTGTCGC+CGG | 0.535935 | 3_3:+79337325 | Msa0475840:CDS |
| CAGATTGATAAGGAACGTGC+TGG | 0.538608 | 3_3:+79337487 | Msa0475840:intron |
| GTGGTTCGAGCGGTGAAGGA+CGG | 0.542160 | 3_3:-79336976 | None:intergenic |
| CGCGGTGGTGGTGGTGACCG+CGG | 0.542608 | 3_3:-79337065 | None:intergenic |
| GCACTCGAACACGCTAATCT+CGG | 0.545558 | 3_3:+79337355 | Msa0475840:CDS |
| ATATGGGTTCAGCTTTACTT+GGG | 0.548003 | 3_3:+79337626 | Msa0475840:CDS |
| ACATGAAGAGAAGACAAGCC+TGG | 0.549620 | 3_3:-79341801 | None:intergenic |
| TTGTTCTCTCTACGTCATTG+AGG | 0.550892 | 3_3:+79341853 | Msa0475840:three_prime_UTR |
| AAGCTTCTCGCTGGTGAGAG+TGG | 0.557032 | 3_3:+79337181 | Msa0475840:CDS |
| TCTATGATAGGTCACTGTCT+TGG | 0.557980 | 3_3:+79340652 | Msa0475840:CDS |
| ATTATTCCAATTGGTTTGGG+TGG | 0.559742 | 3_3:+79337787 | Msa0475840:CDS |
| CGTGTTGTGATTACTGGTAT+GGG | 0.562884 | 3_3:+79337115 | Msa0475840:CDS |
| ATCCGTGACTTCAGTTCTGA+GGG | 0.564390 | 3_3:+79337262 | Msa0475840:CDS |
| AGTTCTGAGGGTTACATCGA+CGG | 0.564909 | 3_3:+79337274 | Msa0475840:CDS |
| TGGCAATCAGGGCCTGAAAG+CGG | 0.566778 | 3_3:-79341781 | None:intergenic |
| GGTGAAGGACGGAGAGTGGA+GGG | 0.567501 | 3_3:-79336965 | None:intergenic |
| TACTATGATAAGCTTCTCGC+TGG | 0.568248 | 3_3:+79337172 | Msa0475840:CDS |
| GGAGACAATCATCAAGTCTC+CGG | 0.571089 | 3_3:-79337306 | None:intergenic |
| GTTCTGAGGGTTACATCGAC+GGG | 0.572909 | 3_3:+79337275 | Msa0475840:CDS |
| AATCGCAGCCTCAGTCCCAC+CGG | 0.576961 | 3_3:-79337767 | None:intergenic |
| ATGACTGATCCAAGATCTGA+CGG | 0.577090 | 3_3:+79338479 | Msa0475840:CDS |
| ATGACATGCTAATACCTTGG+TGG | 0.577600 | 3_3:-79340522 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 3_3:+79337287 | Msa0475840:CDS |
| CAGAGCAGCCTTGAAGATGC+CGG | 0.581799 | 3_3:+79338524 | Msa0475840:CDS |
| ACTGTATCAAAATCAACTGC+AGG | 0.584010 | 3_3:-79341538 | None:intergenic |
| CGGTGAAGGACGGAGAGTGG+AGG | 0.584270 | 3_3:-79336966 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 3_3:+79341752 | Msa0475840:CDS |
| TTGGTTGGATCAGGAATGGG+TGG | 0.590587 | 3_3:+79337514 | Msa0475840:CDS |
| CCATCACGTTCTTTATCCCA+AGG | 0.592200 | 3_3:-79337868 | None:intergenic |
| AGTGAGTGAATGAGTGAGTG+AGG | 0.596001 | 3_3:-79336857 | None:intergenic |
| ATTATTGCTGAATATTTGGG+AGG | 0.597683 | 3_3:+79338431 | Msa0475840:CDS |
| AAATGACTGACACTCACTGA+CGG | 0.598984 | 3_3:-79336897 | None:intergenic |
| GAGGCTGATTTGATGATAGC+CGG | 0.603068 | 3_3:+79337748 | Msa0475840:CDS |
| GGAGACTTGATGATTGTCTC+CGG | 0.603610 | 3_3:+79337308 | Msa0475840:CDS |
| CGGTTTGGAAGCTATTGCCA+CGG | 0.603807 | 3_3:+79340684 | Msa0475840:CDS |
| GGAGATACGAGTGAGTCTCT+TGG | 0.605754 | 3_3:-79337041 | None:intergenic |
| TGCCGGTGTGTCTCCTGAGG+AGG | 0.610564 | 3_3:+79338541 | Msa0475840:CDS |
| AACCCTCAGAACTGAAGTCA+CGG | 0.618872 | 3_3:-79337264 | None:intergenic |
| ACTGACGGAGAGTACGAAGA+AGG | 0.622549 | 3_3:-79336882 | None:intergenic |
| TTGGAGGATTTACGGCGAAG+TGG | 0.624191 | 3_3:-79336995 | None:intergenic |
| CCTTGGGATAAAGAACGTGA+TGG | 0.624852 | 3_3:+79337868 | Msa0475840:CDS |
| CATCAAAATAAATGCCACCA+AGG | 0.629679 | 3_3:+79340508 | Msa0475840:CDS |
| CAATCACATTCGTAGAGGTG+AGG | 0.648046 | 3_3:+79337729 | Msa0475840:CDS |
| CTGGAACATGCCATGAAGCG+AGG | 0.648287 | 3_3:+79338401 | Msa0475840:CDS |
| GATCCAAGATCTGACGGACT+CGG | 0.649080 | 3_3:+79338485 | Msa0475840:CDS |
| TACCTCCTCAGGAGACACAC+CGG | 0.652572 | 3_3:-79338543 | None:intergenic |
| CTGATTTGATGATAGCCGGT+GGG | 0.653774 | 3_3:+79337752 | Msa0475840:CDS |
| TGTTGTTATGGCTTTCACCG+TGG | 0.656749 | 3_3:-79340701 | None:intergenic |
| GATGATAGCCGGTGGGACTG+AGG | 0.658607 | 3_3:+79337759 | Msa0475840:CDS |
| ATTGGTTTGGAGTTATACAG+CGG | 0.667298 | 3_3:+79342008 | Msa0475840:three_prime_UTR |
| TTACGGCGAAGTGGTTCGAG+CGG | 0.669961 | 3_3:-79336986 | None:intergenic |
| TGAAAGCCATAACAACAGGA+TGG | 0.674758 | 3_3:+79340707 | Msa0475840:CDS |
| AGATGCCGGTGTGTCTCCTG+AGG | 0.678881 | 3_3:+79338538 | Msa0475840:CDS |
| GGTGGTGGTGGTGACCGCGG+CGG | 0.695733 | 3_3:-79337062 | None:intergenic |
| GCTGATTTGATGATAGCCGG+TGG | 0.696770 | 3_3:+79337751 | Msa0475840:CDS |
| GCTGCCAATCACATTCGTAG+AGG | 0.700168 | 3_3:+79337724 | Msa0475840:CDS |
| ACTCACTCGTATCTCCGCCG+CGG | 0.783967 | 3_3:+79337048 | Msa0475840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATTAATTATTTATTCAT+TGG | - | chr3_3:79338074-79338093 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTTTTTTGA+AGG | - | chr3_3:79341688-79341707 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAACTAAC+TGG | + | chr3_3:79341692-79341711 | Msa0475840:intron | 10.0% |
| !! | TATATCTTTAATTAACAATA+AGG | - | chr3_3:79342070-79342089 | None:intergenic | 10.0% |
| !! | AAATTTGAAAATCCAATTTA+AGG | - | chr3_3:79337453-79337472 | None:intergenic | 15.0% |
| !! | GCTAAAATTATCTATTTAAA+TGG | + | chr3_3:79338603-79338622 | Msa0475840:intron | 15.0% |
| !! | ATTTAATCCTATGATAAATA+GGG | + | chr3_3:79339020-79339039 | Msa0475840:intron | 15.0% |
| !!! | CTATTATCATTTTTCTTTTT+TGG | + | chr3_3:79339228-79339247 | Msa0475840:intron | 15.0% |
| !! | ACATAATAAAATTCATCTAT+TGG | + | chr3_3:79340153-79340172 | Msa0475840:intron | 15.0% |
| !!! | TATTTAATTCTTTGTTTTTC+AGG | + | chr3_3:79340761-79340780 | Msa0475840:intron | 15.0% |
| !! | TAAATAAGGTTATTATTGAA+CGG | - | chr3_3:79341124-79341143 | None:intergenic | 15.0% |
| !! | AAAAATAAAGGGATAAAATA+CGG | - | chr3_3:79341321-79341340 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAAGGAAA+AGG | - | chr3_3:79341682-79341701 | None:intergenic | 15.0% |
| !!! | ACTACAACTTTTATATATTA+TGG | - | chr3_3:79341895-79341914 | None:intergenic | 15.0% |
| !!! | TGGTATTTAATGTATTTTGA+CGG | - | chr3_3:79336805-79336824 | None:intergenic | 20.0% |
| !! | AGTTAAGAATTTGATTGAAA+AGG | + | chr3_3:79337558-79337577 | Msa0475840:CDS | 20.0% |
| !! | GTTAAGAATTTGATTGAAAA+GGG | + | chr3_3:79337559-79337578 | Msa0475840:CDS | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | - | chr3_3:79337601-79337620 | None:intergenic | 20.0% |
| !!! | GTTACATTGATTAACAATAT+GGG | + | chr3_3:79337983-79338002 | Msa0475840:intron | 20.0% |
| !!! | TTACATTGATTAACAATATG+GGG | + | chr3_3:79337984-79338003 | Msa0475840:intron | 20.0% |
| !!! | GGTTTAGAATTATTCTTTTT+TGG | - | chr3_3:79338255-79338274 | None:intergenic | 20.0% |
| !!! | ATATAGAAATTAGCTTGTAT+AGG | - | chr3_3:79338342-79338361 | None:intergenic | 20.0% |
| !! | TTATCTATTTAAATGGTTGT+TGG | + | chr3_3:79338610-79338629 | Msa0475840:intron | 20.0% |
| !! | AGGAAAAAAATGAATCAAAT+GGG | - | chr3_3:79338646-79338665 | None:intergenic | 20.0% |
| !! | TTAATAGATGTGAAAAAGTT+AGG | + | chr3_3:79338873-79338892 | Msa0475840:intron | 20.0% |
| !! | CATTTAATCCTATGATAAAT+AGG | + | chr3_3:79339019-79339038 | Msa0475840:intron | 20.0% |
| !! | GGTAAAAAAATAATTAACGA+TGG | + | chr3_3:79340939-79340958 | Msa0475840:intron | 20.0% |
| !! | AAAAAAATAATTAACGATGG+TGG | + | chr3_3:79340942-79340961 | Msa0475840:intron | 20.0% |
| !! | AAAAAATAATTAACGATGGT+GGG | + | chr3_3:79340943-79340962 | Msa0475840:intron | 20.0% |
| !! | TCTCCATTTATGAAAATAAA+GGG | - | chr3_3:79341032-79341051 | None:intergenic | 20.0% |
| !!! | TTATTTGTCATTTAAGACAA+TGG | - | chr3_3:79341269-79341288 | None:intergenic | 20.0% |
| !! | TGTCTTAAATGACAAATAAA+AGG | + | chr3_3:79341270-79341289 | Msa0475840:intron | 20.0% |
| !! | ATTTCAAATTCATTTGGATT+TGG | + | chr3_3:79341732-79341751 | Msa0475840:CDS | 20.0% |
| ! | TTCTTCTACATTGGAAATTT+CGG | - | chr3_3:79336769-79336788 | None:intergenic | 25.0% |
| !! | AACTATGTTTTCTTCTACAT+TGG | - | chr3_3:79336778-79336797 | None:intergenic | 25.0% |
| !! | GACAAGTTGTTATTAATCTT+TGG | - | chr3_3:79336825-79336844 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGCAGATTGATA+AGG | + | chr3_3:79337477-79337496 | Msa0475840:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | + | chr3_3:79337609-79337628 | Msa0475840:CDS | 25.0% |
| ! | CCTTATGCTATTACAAATAT+GGG | + | chr3_3:79337610-79337629 | Msa0475840:CDS | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | - | chr3_3:79337673-79337692 | None:intergenic | 25.0% |
| ! | ACAACAAGAAGAAAACATTA+AGG | - | chr3_3:79337949-79337968 | None:intergenic | 25.0% |
| !! | GGTTACATTGATTAACAATA+TGG | + | chr3_3:79337982-79338001 | Msa0475840:intron | 25.0% |
| !! | TACATTGATTAACAATATGG+GGG | + | chr3_3:79337985-79338004 | Msa0475840:intron | 25.0% |
| ! | ACCTATTATTGCTGAATATT+TGG | + | chr3_3:79338427-79338446 | Msa0475840:CDS | 25.0% |
| ! | CCTATTATTGCTGAATATTT+GGG | + | chr3_3:79338428-79338447 | Msa0475840:CDS | 25.0% |
| ! | GAGGAAAAAAATGAATCAAA+TGG | - | chr3_3:79338647-79338666 | None:intergenic | 25.0% |
| !!! | ATTTTAGTACACGATACAAT+AGG | + | chr3_3:79338742-79338761 | Msa0475840:intron | 25.0% |
| !! | TTTTAGTACACGATACAATA+GGG | + | chr3_3:79338743-79338762 | Msa0475840:intron | 25.0% |
| ! | GTCTTCCAATTACATAAATT+AGG | + | chr3_3:79338904-79338923 | Msa0475840:intron | 25.0% |
| ! | TGCATCCTAATTTATGTAAT+TGG | - | chr3_3:79338912-79338931 | None:intergenic | 25.0% |
| ! | AAATGCAAGAAAAATATGCA+CGG | + | chr3_3:79339055-79339074 | Msa0475840:intron | 25.0% |
| ! | AACTTGAATCATGAAGAAAA+AGG | + | chr3_3:79339359-79339378 | Msa0475840:intron | 25.0% |
| !! | CCTTTATTTCATCAAGAATA+TGG | - | chr3_3:79339673-79339692 | None:intergenic | 25.0% |
| ! | CCATATTCTTGATGAAATAA+AGG | + | chr3_3:79339670-79339689 | Msa0475840:intron | 25.0% |
| ! | TGATGAAATAAAGGAGAATT+TGG | + | chr3_3:79339679-79339698 | Msa0475840:intron | 25.0% |
| ! | TAAAATAACAGGAGTTCATT+TGG | - | chr3_3:79339734-79339753 | None:intergenic | 25.0% |
| ! | TTTCATATCGCTAAAATAAC+AGG | - | chr3_3:79339745-79339764 | None:intergenic | 25.0% |
| ! | ATTTCTTGATTTATACCTCA+AGG | + | chr3_3:79339766-79339785 | Msa0475840:intron | 25.0% |
| ! | GCTAACATATAAATAGATAC+TGG | - | chr3_3:79340088-79340107 | None:intergenic | 25.0% |
| ! | AAATTCATCTATTGGATGTA+AGG | + | chr3_3:79340161-79340180 | Msa0475840:intron | 25.0% |
| ! | AATTCATCTATTGGATGTAA+GGG | + | chr3_3:79340162-79340181 | Msa0475840:intron | 25.0% |
| !!! | ATAAACTCATTTTTTTGCAG+AGG | - | chr3_3:79340198-79340217 | None:intergenic | 25.0% |
| ! | TCATTCATTAGGTCAAATAT+GGG | + | chr3_3:79340232-79340251 | Msa0475840:intron | 25.0% |
| ! | ATAACCTACTATGATTTAGA+AGG | - | chr3_3:79340578-79340597 | None:intergenic | 25.0% |
| !!! | ATTCTTTGTTTTTCAGGATT+AGG | + | chr3_3:79340767-79340786 | Msa0475840:intron | 25.0% |
| !!! | AAGACACAAAGTTTTGAAAA+AGG | + | chr3_3:79340918-79340937 | Msa0475840:intron | 25.0% |
| ! | ACACACAAAAAATAAGATGT+GGG | - | chr3_3:79340987-79341006 | None:intergenic | 25.0% |
| ! | TACACACAAAAAATAAGATG+TGG | - | chr3_3:79340988-79341007 | None:intergenic | 25.0% |
| ! | CTCTCCATTTATGAAAATAA+AGG | - | chr3_3:79341033-79341052 | None:intergenic | 25.0% |
| !!! | CTTTATTTTCATAAATGGAG+AGG | + | chr3_3:79341031-79341050 | Msa0475840:intron | 25.0% |
| ! | CAAAATGAAAGCTAAAAAAC+AGG | - | chr3_3:79341159-79341178 | None:intergenic | 25.0% |
| !! | TACAATAAGGACATTTTAGA+TGG | + | chr3_3:79341186-79341205 | Msa0475840:intron | 25.0% |
| !! | TAGACTAAAAGATGTGTTTT+AGG | + | chr3_3:79341443-79341462 | Msa0475840:intron | 25.0% |
| ! | GCATGATAAAGATCATAATT+TGG | + | chr3_3:79341640-79341659 | Msa0475840:intron | 25.0% |
| ! | AGCATATAATGAACAATTAC+AGG | - | chr3_3:79341918-79341937 | None:intergenic | 25.0% |
| !!! | TCTTGTTATTGAATTGTTGT+CGG | + | chr3_3:79342111-79342130 | Msa0475840:three_prime_UTR | 25.0% |
| TTTCTCACTGAACCTTAAAT+TGG | + | chr3_3:79337438-79337457 | Msa0475840:intron | 30.0% | |
| CCCATATTTGTAATAGCATA+AGG | - | chr3_3:79337613-79337632 | None:intergenic | 30.0% | |
| !! | TGGGATTGATTTAGGTTTTA+TGG | + | chr3_3:79337645-79337664 | Msa0475840:CDS | 30.0% |
| !! | GGGATTGATTTAGGTTTTAT+GGG | + | chr3_3:79337646-79337665 | Msa0475840:CDS | 30.0% |
| ! | ACATTGATTAACAATATGGG+GGG | + | chr3_3:79337986-79338005 | Msa0475840:intron | 30.0% |
| !!! | CTTTTTTGGATCATGTAAGA+TGG | - | chr3_3:79338241-79338260 | None:intergenic | 30.0% |
| TACTATAACTTCACAGGTAT+TGG | + | chr3_3:79338373-79338392 | Msa0475840:intron | 30.0% | |
| CCCAAATATTCAGCAATAAT+AGG | - | chr3_3:79338431-79338450 | None:intergenic | 30.0% | |
| ATTATTGCTGAATATTTGGG+AGG | + | chr3_3:79338431-79338450 | Msa0475840:CDS | 30.0% | |
| TTTAGTACACGATACAATAG+GGG | + | chr3_3:79338744-79338763 | Msa0475840:intron | 30.0% | |
| ! | ATGTAGTTATGGTTTCAAGT+AGG | + | chr3_3:79338818-79338837 | Msa0475840:intron | 30.0% |
| TTCATCTCCCTATTTATCAT+AGG | - | chr3_3:79339030-79339049 | None:intergenic | 30.0% | |
| !! | TCGATTTTAGTCATTTCTGT+TGG | + | chr3_3:79339138-79339157 | Msa0475840:intron | 30.0% |
| !! | CGATTTTAGTCATTTCTGTT+GGG | + | chr3_3:79339139-79339158 | Msa0475840:intron | 30.0% |
| GTATAATGTATGTATAACCC+AGG | - | chr3_3:79339205-79339224 | None:intergenic | 30.0% | |
| GCAAACGATGAATATATAGA+TGG | + | chr3_3:79339296-79339315 | Msa0475840:intron | 30.0% | |
| AACGATGAATATATAGATGG+AGG | + | chr3_3:79339299-79339318 | Msa0475840:intron | 30.0% | |
| ACGATGAATATATAGATGGA+GGG | + | chr3_3:79339300-79339319 | Msa0475840:intron | 30.0% | |
| ! | TAGAAGGACTTTTGTGATTT+TGG | + | chr3_3:79339411-79339430 | Msa0475840:intron | 30.0% |
| ! | TGATTTTGGATCAAAATTCC+TGG | + | chr3_3:79339425-79339444 | Msa0475840:intron | 30.0% |
| ! | GATTTTGGATCAAAATTCCT+GGG | + | chr3_3:79339426-79339445 | Msa0475840:intron | 30.0% |
| GAACTTGCAACAATTATGAA+CGG | + | chr3_3:79339472-79339491 | Msa0475840:intron | 30.0% | |
| ! | CCAGTTTTTCTCACTAAATT+CGG | - | chr3_3:79339605-79339624 | None:intergenic | 30.0% |
| ! | TTCTGTTATACCCGTTTTAT+GGG | - | chr3_3:79339832-79339851 | None:intergenic | 30.0% |
| ! | TTTCTGTTATACCCGTTTTA+TGG | - | chr3_3:79339833-79339852 | None:intergenic | 30.0% |
| TACACAGAGAAAAGAGTAAA+TGG | - | chr3_3:79340058-79340077 | None:intergenic | 30.0% | |
| CTCATTCATTAGGTCAAATA+TGG | + | chr3_3:79340231-79340250 | Msa0475840:intron | 30.0% | |
| CATTCATTAGGTCAAATATG+GGG | + | chr3_3:79340233-79340252 | Msa0475840:intron | 30.0% | |
| GTAGAAATCAGTCTTAACAT+TGG | + | chr3_3:79340326-79340345 | Msa0475840:intron | 30.0% | |
| !! | TATGCCATTTGCTTATTTTC+AGG | + | chr3_3:79340394-79340413 | Msa0475840:intron | 30.0% |
| TTGACCTGAAAATAAGCAAA+TGG | - | chr3_3:79340401-79340420 | None:intergenic | 30.0% | |
| GGAGATTAATGCTATCAAAA+AGG | + | chr3_3:79340466-79340485 | Msa0475840:CDS | 30.0% | |
| ! | TGCTATCAAAAAGGTTTTCA+AGG | + | chr3_3:79340475-79340494 | Msa0475840:CDS | 30.0% |
| GTTATAGTTGATCAATTCCA+TGG | + | chr3_3:79340593-79340612 | Msa0475840:intron | 30.0% | |
| !!! | TTTTTCAGGATTAGGATTGT+TGG | + | chr3_3:79340775-79340794 | Msa0475840:intron | 30.0% |
| !! | TTTTCAGGATTAGGATTGTT+GGG | + | chr3_3:79340776-79340795 | Msa0475840:intron | 30.0% |
| ATTTCTCCAAATGGAAGAAA+TGG | - | chr3_3:79340897-79340916 | None:intergenic | 30.0% | |
| ! | TGTGTCTTTATTTCTCCAAA+TGG | - | chr3_3:79340906-79340925 | None:intergenic | 30.0% |
| TGTGTGTATCTCTTTCTAAA+TGG | + | chr3_3:79341000-79341019 | Msa0475840:intron | 30.0% | |
| CCATTTATGAAAATAAAGGG+AGG | - | chr3_3:79341029-79341048 | None:intergenic | 30.0% | |
| !!! | CCTCCCTTTATTTTCATAAA+TGG | + | chr3_3:79341026-79341045 | Msa0475840:intron | 30.0% |
| TAAAGTGAAAGATAGACAGA+AGG | - | chr3_3:79341073-79341092 | None:intergenic | 30.0% | |
| ! | ATTTTGCTCTTGCTACAATA+AGG | + | chr3_3:79341173-79341192 | Msa0475840:intron | 30.0% |
| TGACAAATAAAAGGAGACAA+TGG | + | chr3_3:79341279-79341298 | Msa0475840:intron | 30.0% | |
| GACAAATAAAAGGAGACAAT+GGG | + | chr3_3:79341280-79341299 | Msa0475840:intron | 30.0% | |
| TCCAGGTGAGTAAAAATAAA+GGG | - | chr3_3:79341332-79341351 | None:intergenic | 30.0% | |
| ATCCAGGTGAGTAAAAATAA+AGG | - | chr3_3:79341333-79341352 | None:intergenic | 30.0% | |
| TCAAATTCATTTGGATTTGG+TGG | + | chr3_3:79341735-79341754 | Msa0475840:CDS | 30.0% | |
| ! | TTTGGATCCTTTTCTCTTTG+CGG | - | chr3_3:79337091-79337110 | None:intergenic | 35.0% |
| !! | GGAAGCATCAAATCTATCAA+TGG | - | chr3_3:79337215-79337234 | None:intergenic | 35.0% |
| ! | GGTTTAACTGTGTTTTCTGA+AGG | + | chr3_3:79337535-79337554 | Msa0475840:CDS | 35.0% |
| AATATGGGTTCAGCTTTACT+TGG | + | chr3_3:79337625-79337644 | Msa0475840:CDS | 35.0% | |
| ATATGGGTTCAGCTTTACTT+GGG | + | chr3_3:79337626-79337645 | Msa0475840:CDS | 35.0% | |
| ! | GCTTTACTTGGGATTGATTT+AGG | + | chr3_3:79337637-79337656 | Msa0475840:CDS | 35.0% |
| TGCGATTATTCCAATTGGTT+TGG | + | chr3_3:79337783-79337802 | Msa0475840:CDS | 35.0% | |
| ! | GCGATTATTCCAATTGGTTT+GGG | + | chr3_3:79337784-79337803 | Msa0475840:CDS | 35.0% |
| !! | ATTATTCCAATTGGTTTGGG+TGG | + | chr3_3:79337787-79337806 | Msa0475840:CDS | 35.0% |
| !!! | AGAACGTGATGGTTTTGTTA+TGG | + | chr3_3:79337879-79337898 | Msa0475840:CDS | 35.0% |
| !!! | GAACGTGATGGTTTTGTTAT+GGG | + | chr3_3:79337880-79337899 | Msa0475840:CDS | 35.0% |
| !! | CTTGTTGTTGTTGTTGTTGT+TGG | + | chr3_3:79337961-79337980 | Msa0475840:intron | 35.0% |
| GCTATACTTGCTTCTTAAGA+TGG | + | chr3_3:79338107-79338126 | Msa0475840:intron | 35.0% | |
| ! | TTTTCCTTTGTACATGATCC+CGG | + | chr3_3:79338171-79338190 | Msa0475840:intron | 35.0% |
| TTTGGATCATGTAAGATGGT+GGG | - | chr3_3:79338237-79338256 | None:intergenic | 35.0% | |
| ! | TTTTGGATCATGTAAGATGG+TGG | - | chr3_3:79338238-79338257 | None:intergenic | 35.0% |
| CACTTCAATTCAAAGATGCA+TGG | - | chr3_3:79338276-79338295 | None:intergenic | 35.0% | |
| !!! | TGTGTGTGTCCTGTTTTTTT+TGG | + | chr3_3:79338314-79338333 | Msa0475840:intron | 35.0% |
| !!! | GTGTGTGTCCTGTTTTTTTT+GGG | + | chr3_3:79338315-79338334 | Msa0475840:intron | 35.0% |
| GTATAGGACCCAAAAAAAAC+AGG | - | chr3_3:79338326-79338345 | None:intergenic | 35.0% | |
| !! | CGAAAGTACTATAACTTCAC+AGG | + | chr3_3:79338367-79338386 | Msa0475840:intron | 35.0% |
| ACTGTTTCATTCTCTTTACC+CGG | + | chr3_3:79338565-79338584 | Msa0475840:intron | 35.0% | |
| ! | TAGCAACAAAAAGTGTAAGC+CGG | - | chr3_3:79338587-79338606 | None:intergenic | 35.0% |
| AGAAAGGAAAAACATGCTGA+AGG | - | chr3_3:79338669-79338688 | None:intergenic | 35.0% | |
| ! | TTCAGCATGTTTTTCCTTTC+TGG | + | chr3_3:79338668-79338687 | Msa0475840:intron | 35.0% |
| TTTCTGTTTGCTTGCAATAC+TGG | + | chr3_3:79338702-79338721 | Msa0475840:intron | 35.0% | |
| ! | TGAAGAGTATACATGTGAAG+CGG | + | chr3_3:79338941-79338960 | Msa0475840:intron | 35.0% |
| ! | AGCATTGAAGAGAAAAGCTA+AGG | + | chr3_3:79339082-79339101 | Msa0475840:intron | 35.0% |
| ! | TGGGTTTTCTCTTGTAATTC+AGG | + | chr3_3:79339158-79339177 | Msa0475840:intron | 35.0% |
| ! | GGGTTTTCTCTTGTAATTCA+GGG | + | chr3_3:79339159-79339178 | Msa0475840:intron | 35.0% |
| TAAAACTGTTATCAGTGCCT+GGG | + | chr3_3:79339185-79339204 | Msa0475840:intron | 35.0% | |
| !! | TAACACCAGTTGGTAAAAAC+TGG | - | chr3_3:79339255-79339274 | None:intergenic | 35.0% |
| AATATATAGATGGAGGGAAG+TGG | + | chr3_3:79339306-79339325 | Msa0475840:intron | 35.0% | |
| ATATATAGATGGAGGGAAGT+GGG | + | chr3_3:79339307-79339326 | Msa0475840:intron | 35.0% | |
| ATATTATGATCCCCTCTAGA+AGG | + | chr3_3:79339395-79339414 | Msa0475840:intron | 35.0% | |
| ATCACAAAAGTCCTTCTAGA+GGG | - | chr3_3:79339409-79339428 | None:intergenic | 35.0% | |
| AATCACAAAAGTCCTTCTAG+AGG | - | chr3_3:79339410-79339429 | None:intergenic | 35.0% | |
| GATCAAAATTCCTGGGATAA+GGG | + | chr3_3:79339433-79339452 | Msa0475840:intron | 35.0% | |
| ACAATTATGAACGGCAAAGA+CGG | + | chr3_3:79339481-79339500 | Msa0475840:intron | 35.0% | |
| GGAATGAGTTTACACTTTAC+AGG | - | chr3_3:79339550-79339569 | None:intergenic | 35.0% | |
| ! | GTTTTTCTCACTAAATTCGG+TGG | - | chr3_3:79339602-79339621 | None:intergenic | 35.0% |
| CCGAATTTAGTGAGAAAAAC+TGG | + | chr3_3:79339602-79339621 | Msa0475840:intron | 35.0% | |
| AAAAACTGGACACATTTCCA+TGG | + | chr3_3:79339616-79339635 | Msa0475840:intron | 35.0% | |
| TGATTTATACCTCAAGGACA+AGG | + | chr3_3:79339772-79339791 | Msa0475840:intron | 35.0% | |
| TTAGGTAACCACCCATAAAA+CGG | + | chr3_3:79339818-79339837 | Msa0475840:intron | 35.0% | |
| !!! | TTGTGCTTTATTTTCACAGC+TGG | - | chr3_3:79339878-79339897 | None:intergenic | 35.0% |
| AAGGGACAGAATTCTTATGA+TGG | + | chr3_3:79339927-79339946 | Msa0475840:intron | 35.0% | |
| ! | CAGAATTCTTATGATGGAGT+TGG | + | chr3_3:79339933-79339952 | Msa0475840:intron | 35.0% |
| TGATGGAGTTGGATGATAAA+TGG | + | chr3_3:79339944-79339963 | Msa0475840:intron | 35.0% | |
| GATGGAGTTGGATGATAAAT+GGG | + | chr3_3:79339945-79339964 | Msa0475840:intron | 35.0% | |
| AGATGCTCTGTGAATGAATT+GGG | + | chr3_3:79339996-79340015 | Msa0475840:intron | 35.0% | |
| TACAACTAGCACAAGGAATT+TGG | - | chr3_3:79340033-79340052 | None:intergenic | 35.0% | |
| AATGGAATACAACTAGCACA+AGG | - | chr3_3:79340040-79340059 | None:intergenic | 35.0% | |
| ! | ACTCTTTTCTCTGTGTACTT+TGG | + | chr3_3:79340061-79340080 | Msa0475840:intron | 35.0% |
| !!! | AACTCATTTTTTTGCAGAGG+AGG | - | chr3_3:79340195-79340214 | None:intergenic | 35.0% |
| AAGCTGCTAATGGAAATAAG+AGG | + | chr3_3:79340259-79340278 | Msa0475840:intron | 35.0% | |
| CATCAAAATAAATGCCACCA+AGG | + | chr3_3:79340508-79340527 | Msa0475840:CDS | 35.0% | |
| CAAATGACATGCTAATACCT+TGG | - | chr3_3:79340528-79340547 | None:intergenic | 35.0% | |
| ! | TGTCATTTGCTCTTATTTGC+TGG | + | chr3_3:79340539-79340558 | Msa0475840:intron | 35.0% |
| TCTGCCTTCTAAATCATAGT+AGG | + | chr3_3:79340571-79340590 | Msa0475840:intron | 35.0% | |
| AGAACGTATGCATCAGTTAA+TGG | - | chr3_3:79340619-79340638 | None:intergenic | 35.0% | |
| CTGTGATATCAGTCTATGAT+AGG | + | chr3_3:79340640-79340659 | Msa0475840:intron | 35.0% | |
| CGTACGAATTGATTGATTGA+GGG | - | chr3_3:79340739-79340758 | None:intergenic | 35.0% | |
| ACGTACGAATTGATTGATTG+AGG | - | chr3_3:79340740-79340759 | None:intergenic | 35.0% | |
| GAAATGGAGAAGGACATAAA+TGG | - | chr3_3:79340881-79340900 | None:intergenic | 35.0% | |
| !! | GGTTGAGGTACTGATAAATA+AGG | - | chr3_3:79341138-79341157 | None:intergenic | 35.0% |
| GAAAGCTAAAAAACAGGTTG+AGG | - | chr3_3:79341153-79341172 | None:intergenic | 35.0% | |
| !!! | TCCCTTTATTTTTACTCACC+TGG | + | chr3_3:79341328-79341347 | Msa0475840:intron | 35.0% |
| !!! | GTCTTGTTGTTTTCATTGCT+CGG | + | chr3_3:79341404-79341423 | Msa0475840:intron | 35.0% |
| ! | TGTTTTCATTGCTCGGTAAT+TGG | + | chr3_3:79341411-79341430 | Msa0475840:intron | 35.0% |
| ! | GTTTTCATTGCTCGGTAATT+GGG | + | chr3_3:79341412-79341431 | Msa0475840:intron | 35.0% |
| CATAATCATTCTGTTTGCCT+TGG | + | chr3_3:79341494-79341513 | Msa0475840:intron | 35.0% | |
| ACTGTATCAAAATCAACTGC+AGG | - | chr3_3:79341541-79341560 | None:intergenic | 35.0% | |
| !! | TGCAGTTGATTTTGATACAG+TGG | + | chr3_3:79341540-79341559 | Msa0475840:CDS | 35.0% |
| CAGCAGCATGAAATTAATGT+TGG | + | chr3_3:79341574-79341593 | Msa0475840:CDS | 35.0% | |
| TGCGAAAATGAAAAATGCAC+TGG | - | chr3_3:79341623-79341642 | None:intergenic | 35.0% | |
| AATTTGGACTGCTAACTAAC+TGG | + | chr3_3:79341656-79341675 | Msa0475840:intron | 35.0% | |
| TGAAATGCCTGGAAAAAGAA+AGG | - | chr3_3:79341718-79341737 | None:intergenic | 35.0% | |
| ! | CCAAATGAATTTGAAATGCC+TGG | - | chr3_3:79341729-79341748 | None:intergenic | 35.0% |
| CCAGGCATTTCAAATTCATT+TGG | + | chr3_3:79341726-79341745 | Msa0475840:intron | 35.0% | |
| AGTTCTACAGCAAAAGTCTT+TGG | - | chr3_3:79341963-79341982 | None:intergenic | 35.0% | |
| ATGTAGCACGAAGATTTCAT+TGG | + | chr3_3:79341990-79342009 | Msa0475840:three_prime_UTR | 35.0% | |
| !! | ATTGGTTTGGAGTTATACAG+CGG | + | chr3_3:79342008-79342027 | Msa0475840:three_prime_UTR | 35.0% |
| AAATGACTGACACTCACTGA+CGG | - | chr3_3:79336900-79336919 | None:intergenic | 40.0% | |
| GTAATCACAACACGCTTCTT+TGG | - | chr3_3:79337109-79337128 | None:intergenic | 40.0% | |
| ! | AAGAAGCGTGTTGTGATTAC+TGG | + | chr3_3:79337109-79337128 | Msa0475840:CDS | 40.0% |
| CGTGTTGTGATTACTGGTAT+GGG | + | chr3_3:79337115-79337134 | Msa0475840:CDS | 40.0% | |
| TACTATGATAAGCTTCTCGC+TGG | + | chr3_3:79337172-79337191 | Msa0475840:CDS | 40.0% | |
| !!! | GTTTTGGTTGGATCAGGAAT+GGG | + | chr3_3:79337511-79337530 | Msa0475840:CDS | 40.0% |
| ATGACCCTAAAACTGCTTCT+AGG | + | chr3_3:79337845-79337864 | Msa0475840:CDS | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | - | chr3_3:79337852-79337871 | None:intergenic | 40.0% |
| TAAAACTGCTTCTAGGCCTT+GGG | + | chr3_3:79337852-79337871 | Msa0475840:CDS | 40.0% | |
| !!! | GATGGTTTTGTTATGGGAGA+AGG | + | chr3_3:79337886-79337905 | Msa0475840:CDS | 40.0% |
| ! | TTTGTTATGGGAGAAGGTTC+TGG | + | chr3_3:79337892-79337911 | Msa0475840:CDS | 40.0% |
| !!! | AAGGTTCTGGAGTTTTGGTT+AGG | + | chr3_3:79337905-79337924 | Msa0475840:intron | 40.0% |
| TGATTAACAATATGGGGGGT+TGG | + | chr3_3:79337990-79338009 | Msa0475840:intron | 40.0% | |
| TTAACAATATGGGCAGCTCA+AGG | + | chr3_3:79338013-79338032 | Msa0475840:intron | 40.0% | |
| TAACAATATGGGCAGCTCAA+GGG | + | chr3_3:79338014-79338033 | Msa0475840:intron | 40.0% | |
| AAAACAGGACACACACAACA+TGG | - | chr3_3:79338311-79338330 | None:intergenic | 40.0% | |
| ATGACTGATCCAAGATCTGA+CGG | + | chr3_3:79338479-79338498 | Msa0475840:CDS | 40.0% | |
| ! | AGCAACAAAAAGTGTAAGCC+GGG | - | chr3_3:79338586-79338605 | None:intergenic | 40.0% |
| AAGGAAAAACATGCTGAAGG+AGG | - | chr3_3:79338666-79338685 | None:intergenic | 40.0% | |
| AGCAAACAGAAACGTAGAGT+CGG | - | chr3_3:79338694-79338713 | None:intergenic | 40.0% | |
| !!! | TGCTATTTTTCATGCATGCC+AGG | - | chr3_3:79338774-79338793 | None:intergenic | 40.0% |
| TAGCTGCTGCTATGTAGTTA+TGG | + | chr3_3:79338807-79338826 | Msa0475840:intron | 40.0% | |
| ! | TAAGGCCTCTAAAAAAGCCT+CGG | + | chr3_3:79339100-79339119 | Msa0475840:intron | 40.0% |
| CTAAAACTGTTATCAGTGCC+TGG | + | chr3_3:79339184-79339203 | Msa0475840:intron | 40.0% | |
| ! | TTGGTCCAGTTTTTACCAAC+TGG | + | chr3_3:79339247-79339266 | Msa0475840:intron | 40.0% |
| !! | GTTTTGATGCCTTATACGAG+AGG | - | chr3_3:79339342-79339361 | None:intergenic | 40.0% |
| GGGGATCATAATATCTCATC+TGG | - | chr3_3:79339389-79339408 | None:intergenic | 40.0% | |
| ! | TCACAAAAGTCCTTCTAGAG+GGG | - | chr3_3:79339408-79339427 | None:intergenic | 40.0% |
| GGATCAAAATTCCTGGGATA+AGG | + | chr3_3:79339432-79339451 | Msa0475840:intron | 40.0% | |
| ! | ATTCCTGTTTCAGCCTTGTA+TGG | + | chr3_3:79339565-79339584 | Msa0475840:intron | 40.0% |
| GGTTTCATCTCTACCATACA+AGG | - | chr3_3:79339581-79339600 | None:intergenic | 40.0% | |
| !! | GGAAGGCATTGCTAATATTG+TGG | + | chr3_3:79339640-79339659 | Msa0475840:intron | 40.0% |
| CTGTGCGTGTTTGTATTCTT+AGG | + | chr3_3:79339800-79339819 | Msa0475840:intron | 40.0% | |
| TAGGTAACCACCCATAAAAC+GGG | + | chr3_3:79339819-79339838 | Msa0475840:intron | 40.0% | |
| ! | TGTTATACCCGTTTTATGGG+TGG | - | chr3_3:79339829-79339848 | None:intergenic | 40.0% |
| GAGATGCTCTGTGAATGAAT+TGG | + | chr3_3:79339995-79340014 | Msa0475840:intron | 40.0% | |
| ACTAGCACAAGGAATTTGGT+AGG | - | chr3_3:79340029-79340048 | None:intergenic | 40.0% | |
| TAATGAATGAGCGAGTAGCT+GGG | - | chr3_3:79340222-79340241 | None:intergenic | 40.0% | |
| !! | AAGGTTTTCAAGGACACTTC+TGG | + | chr3_3:79340485-79340504 | Msa0475840:CDS | 40.0% |
| ATGACATGCTAATACCTTGG+TGG | - | chr3_3:79340525-79340544 | None:intergenic | 40.0% | |
| TATGCATCAGTTAATGGCCA+TGG | - | chr3_3:79340613-79340632 | None:intergenic | 40.0% | |
| TCTATGATAGGTCACTGTCT+TGG | + | chr3_3:79340652-79340671 | Msa0475840:CDS | 40.0% | |
| TGAAAGCCATAACAACAGGA+TGG | + | chr3_3:79340707-79340726 | Msa0475840:CDS | 40.0% | |
| GTTAGAACCAAATGAGTGCT+CGG | + | chr3_3:79340804-79340823 | Msa0475840:intron | 40.0% | |
| TTAGAACCAAATGAGTGCTC+GGG | + | chr3_3:79340805-79340824 | Msa0475840:intron | 40.0% | |
| AGTGCTCGGGCATTTATTAT+TGG | + | chr3_3:79340818-79340837 | Msa0475840:intron | 40.0% | |
| CCAAATGGAAGAAATGGAGA+AGG | - | chr3_3:79340891-79340910 | None:intergenic | 40.0% | |
| CCTTCTCCATTTCTTCCATT+TGG | + | chr3_3:79340888-79340907 | Msa0475840:intron | 40.0% | |
| CAGCACAACAAAAAGAATCC+AGG | - | chr3_3:79341349-79341368 | None:intergenic | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | - | chr3_3:79341535-79341554 | None:intergenic | 40.0% | |
| !!! | TAACTGGCCTTTCTTTTTCC+AGG | + | chr3_3:79341708-79341727 | Msa0475840:intron | 40.0% |
| TTGTTCTCTCTACGTCATTG+AGG | + | chr3_3:79341853-79341872 | Msa0475840:three_prime_UTR | 40.0% | |
| !! | CAAAAGTCTTTGGAGCTAAC+TGG | - | chr3_3:79341953-79341972 | None:intergenic | 40.0% |
| ! | GCACGAAGATTTCATTGGTT+TGG | + | chr3_3:79341995-79342014 | Msa0475840:three_prime_UTR | 40.0% |
| ! | AGTGTCGAGAGAGCTTATTT+AGG | + | chr3_3:79342037-79342056 | Msa0475840:three_prime_UTR | 40.0% |
| AGTGAGTGAATGAGTGAGTG+AGG | - | chr3_3:79336860-79336879 | None:intergenic | 45.0% | |
| !!! | AGTGAGTCTCTTGGTTTTGG+CGG | - | chr3_3:79337035-79337054 | None:intergenic | 45.0% |
| ! | ACGAGTGAGTCTCTTGGTTT+TGG | - | chr3_3:79337038-79337057 | None:intergenic | 45.0% |
| GCGTGTTGTGATTACTGGTA+TGG | + | chr3_3:79337114-79337133 | Msa0475840:CDS | 45.0% | |
| TACTGGTATGGGTCTTGCTT+CGG | + | chr3_3:79337126-79337145 | Msa0475840:CDS | 45.0% | |
| !! | AGCGAATCGAGTTGGGAATT+TGG | - | chr3_3:79337236-79337255 | None:intergenic | 45.0% |
| ! | AAATTCCCAACTCGATTCGC+TGG | + | chr3_3:79337235-79337254 | Msa0475840:CDS | 45.0% |
| ! | ATCCGTGACTTCAGTTCTGA+GGG | + | chr3_3:79337262-79337281 | Msa0475840:CDS | 45.0% |
| AACCCTCAGAACTGAAGTCA+CGG | - | chr3_3:79337267-79337286 | None:intergenic | 45.0% | |
| !! | AGTTCTGAGGGTTACATCGA+CGG | + | chr3_3:79337274-79337293 | Msa0475840:CDS | 45.0% |
| GGAGACAATCATCAAGTCTC+CGG | - | chr3_3:79337309-79337328 | None:intergenic | 45.0% | |
| ! | GGAGACTTGATGATTGTCTC+CGG | + | chr3_3:79337308-79337327 | Msa0475840:CDS | 45.0% |
| GTGTTCGAGTGCTTTCTTAC+CGG | - | chr3_3:79337347-79337366 | None:intergenic | 45.0% | |
| !! | CGGTGCTGCAAATCTATCTA+AGG | + | chr3_3:79337375-79337394 | Msa0475840:CDS | 45.0% |
| CAGATTGATAAGGAACGTGC+TGG | + | chr3_3:79337487-79337506 | Msa0475840:intron | 45.0% | |
| !!! | CGTTTTGGTTGGATCAGGAA+TGG | + | chr3_3:79337510-79337529 | Msa0475840:CDS | 45.0% |
| CTCACCTCTACGAATGTGAT+TGG | - | chr3_3:79337731-79337750 | None:intergenic | 45.0% | |
| CAATCACATTCGTAGAGGTG+AGG | + | chr3_3:79337729-79337748 | Msa0475840:CDS | 45.0% | |
| !! | GAGGCTGATTTGATGATAGC+CGG | + | chr3_3:79337748-79337767 | Msa0475840:CDS | 45.0% |
| ! | CTGATTTGATGATAGCCGGT+GGG | + | chr3_3:79337752-79337771 | Msa0475840:CDS | 45.0% |
| GAGGCTGCGATTATTCCAAT+TGG | + | chr3_3:79337778-79337797 | Msa0475840:CDS | 45.0% | |
| ACGAAACCACCCAAACCAAT+TGG | - | chr3_3:79337796-79337815 | None:intergenic | 45.0% | |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | - | chr3_3:79337853-79337872 | None:intergenic | 45.0% |
| CTAAAACTGCTTCTAGGCCT+TGG | + | chr3_3:79337851-79337870 | Msa0475840:CDS | 45.0% | |
| CCATCACGTTCTTTATCCCA+AGG | - | chr3_3:79337871-79337890 | None:intergenic | 45.0% | |
| CCTTGGGATAAAGAACGTGA+TGG | + | chr3_3:79337868-79337887 | Msa0475840:CDS | 45.0% | |
| !! | TGGGGGGTTGGTTAACAATA+TGG | + | chr3_3:79338002-79338021 | Msa0475840:intron | 45.0% |
| !! | GGGGGGTTGGTTAACAATAT+GGG | + | chr3_3:79338003-79338022 | Msa0475840:intron | 45.0% |
| !! | TTCACAGGTATTGGAAAGCC+TGG | + | chr3_3:79338382-79338401 | Msa0475840:intron | 45.0% |
| GAATGAAACAGTACCTCCTC+AGG | - | chr3_3:79338557-79338576 | None:intergenic | 45.0% | |
| TGTGGTATGAGAGGGACTAT+GGG | + | chr3_3:79338985-79339004 | Msa0475840:intron | 45.0% | |
| ! | AAGGCCTCTAAAAAAGCCTC+GGG | + | chr3_3:79339101-79339120 | Msa0475840:intron | 45.0% |
| GAATGAAATTAGTCAGCCCG+AGG | - | chr3_3:79339120-79339139 | None:intergenic | 45.0% | |
| GTGTTAGAGCTCCCAATTGT+GGG | + | chr3_3:79339269-79339288 | Msa0475840:intron | 45.0% | |
| ! | ATAGCTCTGCCTCTCGTATA+AGG | + | chr3_3:79339330-79339349 | Msa0475840:intron | 45.0% |
| TTCCTGGGATAAGGGTTGAA+AGG | + | chr3_3:79339441-79339460 | Msa0475840:intron | 45.0% | |
| GGATAAGGGTTGAAAGGTGA+AGG | + | chr3_3:79339447-79339466 | Msa0475840:intron | 45.0% | |
| ! | CTCAGCTGAGTTGAGTTCTA+GGG | + | chr3_3:79339504-79339523 | Msa0475840:intron | 45.0% |
| CTACCATACAAGGCTGAAAC+AGG | - | chr3_3:79339571-79339590 | None:intergenic | 45.0% | |
| AACTGGACACATTTCCATGG+TGG | + | chr3_3:79339619-79339638 | Msa0475840:intron | 45.0% | |
| ATTAGCAATGCCTTCCACCA+TGG | - | chr3_3:79339636-79339655 | None:intergenic | 45.0% | |
| ACAGTTTCACCTTGTCCTTG+AGG | - | chr3_3:79339784-79339803 | None:intergenic | 45.0% | |
| GGAGTTGGATGATAAATGGG+AGG | + | chr3_3:79339948-79339967 | Msa0475840:intron | 45.0% | |
| TGGATGATAAATGGGAGGAG+AGG | + | chr3_3:79339953-79339972 | Msa0475840:intron | 45.0% | |
| TCTGTGAATGAATTGGGACC+CGG | + | chr3_3:79340002-79340021 | Msa0475840:intron | 45.0% | |
| CTAATGAATGAGCGAGTAGC+TGG | - | chr3_3:79340223-79340242 | None:intergenic | 45.0% | |
| CAGCTACTCGCTCATTCATT+AGG | + | chr3_3:79340221-79340240 | Msa0475840:intron | 45.0% | |
| TATGGGGCTTAAGCTGCTAA+TGG | + | chr3_3:79340249-79340268 | Msa0475840:intron | 45.0% | |
| TTCCACTCTTGCTGGTGATT+TGG | + | chr3_3:79340442-79340461 | Msa0475840:CDS | 45.0% | |
| TGTTGTTATGGCTTTCACCG+TGG | - | chr3_3:79340704-79340723 | None:intergenic | 45.0% | |
| ACGGTGAAAGCCATAACAAC+AGG | + | chr3_3:79340703-79340722 | Msa0475840:CDS | 45.0% | |
| ATGCAGCCATCCTGTTGTTA+TGG | - | chr3_3:79340716-79340735 | None:intergenic | 45.0% | |
| TAAATGCCCGAGCACTCATT+TGG | - | chr3_3:79340814-79340833 | None:intergenic | 45.0% | |
| AATGGAGAGGATCTTGACTC+AGG | - | chr3_3:79340863-79340882 | None:intergenic | 45.0% | |
| GGAGAAGGACATAAATGGAG+AGG | - | chr3_3:79340876-79340895 | None:intergenic | 45.0% | |
| GACAGAAGGAGTAACGAGTA+AGG | - | chr3_3:79341059-79341078 | None:intergenic | 45.0% | |
| TCATTGCTCGGTAATTGGGA+TGG | + | chr3_3:79341416-79341435 | Msa0475840:intron | 45.0% | |
| GGATTCTACACTCAAGACCA+AGG | - | chr3_3:79341514-79341533 | None:intergenic | 45.0% | |
| ACATGAAGAGAAGACAAGCC+TGG | - | chr3_3:79341804-79341823 | None:intergenic | 45.0% | |
| ! | ACTGACGGAGAGTACGAAGA+AGG | - | chr3_3:79336885-79336904 | None:intergenic | 50.0% |
| TTGGAGGATTTACGGCGAAG+TGG | - | chr3_3:79336998-79337017 | None:intergenic | 50.0% | |
| ! | TGGCGGCATTGGAGGATTTA+CGG | - | chr3_3:79337006-79337025 | None:intergenic | 50.0% |
| GGAGATACGAGTGAGTCTCT+TGG | - | chr3_3:79337044-79337063 | None:intergenic | 50.0% | |
| ! | ATCCTTTTCTCTTTGCGGCG+CGG | - | chr3_3:79337086-79337105 | None:intergenic | 50.0% |
| !! | ATGGGTCTTGCTTCGGTGTT+TGG | + | chr3_3:79337133-79337152 | Msa0475840:CDS | 50.0% |
| TCTGACCAGCGAATCGAGTT+GGG | - | chr3_3:79337243-79337262 | None:intergenic | 50.0% | |
| ATCTGACCAGCGAATCGAGT+TGG | - | chr3_3:79337244-79337263 | None:intergenic | 50.0% | |
| GATCCGTGACTTCAGTTCTG+AGG | + | chr3_3:79337261-79337280 | Msa0475840:CDS | 50.0% | |
| !! | GTTCTGAGGGTTACATCGAC+GGG | + | chr3_3:79337275-79337294 | Msa0475840:CDS | 50.0% |
| ACATCGACGGGAAGAATGAC+CGG | + | chr3_3:79337287-79337306 | Msa0475840:CDS | 50.0% | |
| GCACTCGAACACGCTAATCT+CGG | + | chr3_3:79337355-79337374 | Msa0475840:CDS | 50.0% | |
| !! | TAAGGAACGTGCTGGCGTTT+TGG | + | chr3_3:79337495-79337514 | Msa0475840:CDS | 50.0% |
| TTGGTTGGATCAGGAATGGG+TGG | + | chr3_3:79337514-79337533 | Msa0475840:CDS | 50.0% | |
| GCTGCCAATCACATTCGTAG+AGG | + | chr3_3:79337724-79337743 | Msa0475840:CDS | 50.0% | |
| !! | GCTGATTTGATGATAGCCGG+TGG | + | chr3_3:79337751-79337770 | Msa0475840:CDS | 50.0% |
| !!! | GGGAGAAGGTTCTGGAGTTT+TGG | + | chr3_3:79337900-79337919 | Msa0475840:CDS | 50.0% |
| TATGGGCAGCTCAAGGGTTA+AGG | + | chr3_3:79338020-79338039 | Msa0475840:intron | 50.0% | |
| CAGCTCAAGGGTTAAGGTGT+TGG | + | chr3_3:79338026-79338045 | Msa0475840:intron | 50.0% | |
| !! | CTCAAGGGTTAAGGTGTTGG+AGG | + | chr3_3:79338029-79338048 | Msa0475840:intron | 50.0% |
| TGCACCGGGATCATGTACAA+AGG | - | chr3_3:79338178-79338197 | None:intergenic | 50.0% | |
| ACTAGATCTCCCGCATATGC+AGG | + | chr3_3:79338197-79338216 | Msa0475840:intron | 50.0% | |
| CTAGATCTCCCGCATATGCA+GGG | + | chr3_3:79338198-79338217 | Msa0475840:intron | 50.0% | |
| TTCCTAGACCCTGCATATGC+GGG | - | chr3_3:79338209-79338228 | None:intergenic | 50.0% | |
| CTTCCTAGACCCTGCATATG+CGG | - | chr3_3:79338210-79338229 | None:intergenic | 50.0% | |
| GCATATGCAGGGTCTAGGAA+GGG | + | chr3_3:79338209-79338228 | Msa0475840:intron | 50.0% | |
| CATATGCAGGGTCTAGGAAG+GGG | + | chr3_3:79338210-79338229 | Msa0475840:intron | 50.0% | |
| AATAGGTGCACCTCGCTTCA+TGG | - | chr3_3:79338414-79338433 | None:intergenic | 50.0% | |
| !! | GATCCAAGATCTGACGGACT+CGG | + | chr3_3:79338485-79338504 | Msa0475840:CDS | 50.0% |
| AAACGTAGAGTCGGCCAGAA+AGG | - | chr3_3:79338685-79338704 | None:intergenic | 50.0% | |
| CGATACAATAGGGGATGACC+TGG | + | chr3_3:79338753-79338772 | Msa0475840:intron | 50.0% | |
| TGTTGGGGTGTGGTATGAGA+GGG | + | chr3_3:79338977-79338996 | Msa0475840:intron | 50.0% | |
| GTGTGGTATGAGAGGGACTA+TGG | + | chr3_3:79338984-79339003 | Msa0475840:intron | 50.0% | |
| TATGAGAGGGACTATGGGTC+TGG | + | chr3_3:79338990-79339009 | Msa0475840:intron | 50.0% | |
| !!! | TCAGCCCGAGGCTTTTTTAG+AGG | - | chr3_3:79339108-79339127 | None:intergenic | 50.0% |
| ! | TTGGGAGCTCTAACACCAGT+TGG | - | chr3_3:79339265-79339284 | None:intergenic | 50.0% |
| GGTGTTAGAGCTCCCAATTG+TGG | + | chr3_3:79339268-79339287 | Msa0475840:intron | 50.0% | |
| CGTTTGCAGCTCCCACAATT+GGG | - | chr3_3:79339283-79339302 | None:intergenic | 50.0% | |
| TCGTTTGCAGCTCCCACAAT+TGG | - | chr3_3:79339284-79339303 | None:intergenic | 50.0% | |
| CACCTTTCAACCCTTATCCC+AGG | - | chr3_3:79339446-79339465 | None:intergenic | 50.0% | |
| ! | GCTCAGCTGAGTTGAGTTCT+AGG | + | chr3_3:79339503-79339522 | Msa0475840:intron | 50.0% |
| ! | GGACACATTTCCATGGTGGA+AGG | + | chr3_3:79339623-79339642 | Msa0475840:intron | 50.0% |
| ACAATTGCTTGCACGCAGCA+GGG | + | chr3_3:79339894-79339913 | Msa0475840:intron | 50.0% | |
| GGGAGGAGAGGAAAGAGAAA+AGG | + | chr3_3:79339965-79339984 | Msa0475840:intron | 50.0% | |
| CTGTGAATGAATTGGGACCC+GGG | + | chr3_3:79340003-79340022 | Msa0475840:intron | 50.0% | |
| ACAAGGAATTTGGTAGGCCC+GGG | - | chr3_3:79340023-79340042 | None:intergenic | 50.0% | |
| CACAAGGAATTTGGTAGGCC+CGG | - | chr3_3:79340024-79340043 | None:intergenic | 50.0% | |
| CATGCAACTTCCACTCTTGC+TGG | + | chr3_3:79340434-79340453 | Msa0475840:CDS | 50.0% | |
| ! | CACTCTTGCTGGTGATTTGG+CGG | + | chr3_3:79340445-79340464 | Msa0475840:CDS | 50.0% |
| ! | CGGTTTGGAAGCTATTGCCA+CGG | + | chr3_3:79340684-79340703 | Msa0475840:CDS | 50.0% |
| TGTGGGTCCTACCACTAAGT+GGG | - | chr3_3:79340970-79340989 | None:intergenic | 50.0% | |
| ATGTGGGTCCTACCACTAAG+TGG | - | chr3_3:79340971-79340990 | None:intergenic | 50.0% | |
| !! | TCGTGGCTTTTTCCGCTTTC+AGG | + | chr3_3:79341769-79341788 | Msa0475840:CDS | 50.0% |
| GAAGACAAGCCTGGCAATCA+GGG | - | chr3_3:79341795-79341814 | None:intergenic | 50.0% | |
| AGAAGACAAGCCTGGCAATC+AGG | - | chr3_3:79341796-79341815 | None:intergenic | 50.0% | |
| TTACGGCGAAGTGGTTCGAG+CGG | - | chr3_3:79336989-79337008 | None:intergenic | 55.0% | |
| !!! | GAGTCTCTTGGTTTTGGCGG+CGG | - | chr3_3:79337032-79337051 | None:intergenic | 55.0% |
| AAGCTTCTCGCTGGTGAGAG+TGG | + | chr3_3:79337181-79337200 | Msa0475840:CDS | 55.0% | |
| TACCGGCGACAATGCAGTAC+CGG | - | chr3_3:79337330-79337349 | None:intergenic | 55.0% | |
| !! | GAACGTGCTGGCGTTTTGGT+TGG | + | chr3_3:79337499-79337518 | Msa0475840:CDS | 55.0% |
| !!! | GCTGGCGTTTTGGTTGGATC+AGG | + | chr3_3:79337505-79337524 | Msa0475840:CDS | 55.0% |
| TGGGTGGTTTCGTTGCTTGC+AGG | + | chr3_3:79337803-79337822 | Msa0475840:CDS | 55.0% | |
| GGGTGGTTTCGTTGCTTGCA+GGG | + | chr3_3:79337804-79337823 | Msa0475840:CDS | 55.0% | |
| ATGCGGGAGATCTAGTGCAC+CGG | - | chr3_3:79338193-79338212 | None:intergenic | 55.0% | |
| CGCATATGCAGGGTCTAGGA+AGG | + | chr3_3:79338208-79338227 | Msa0475840:intron | 55.0% | |
| CTCGCTTCATGGCATGTTCC+AGG | - | chr3_3:79338403-79338422 | None:intergenic | 55.0% | |
| CTGGAACATGCCATGAAGCG+AGG | + | chr3_3:79338401-79338420 | Msa0475840:CDS | 55.0% | |
| CAGAGCAGCCTTGAAGATGC+CGG | + | chr3_3:79338524-79338543 | Msa0475840:CDS | 55.0% | |
| GAGACACACCGGCATCTTCA+AGG | - | chr3_3:79338535-79338554 | None:intergenic | 55.0% | |
| TACCTCCTCAGGAGACACAC+CGG | - | chr3_3:79338546-79338565 | None:intergenic | 55.0% | |
| TGTGAAGCGGTCTGCACACA+TGG | + | chr3_3:79338954-79338973 | Msa0475840:intron | 55.0% | |
| CGGTCTGCACACATGGTGTT+GGG | + | chr3_3:79338961-79338980 | Msa0475840:intron | 55.0% | |
| ! | GGTCTGCACACATGGTGTTG+GGG | + | chr3_3:79338962-79338981 | Msa0475840:intron | 55.0% |
| GTGTTGGGGTGTGGTATGAG+AGG | + | chr3_3:79338976-79338995 | Msa0475840:intron | 55.0% | |
| CACAATTGCTTGCACGCAGC+AGG | + | chr3_3:79339893-79339912 | Msa0475840:intron | 55.0% | |
| CAATTGCTTGCACGCAGCAG+GGG | + | chr3_3:79339895-79339914 | Msa0475840:intron | 55.0% | |
| AATTGCTTGCACGCAGCAGG+GGG | + | chr3_3:79339896-79339915 | Msa0475840:intron | 55.0% | |
| CGCCAAATCACCAGCAAGAG+TGG | - | chr3_3:79340447-79340466 | None:intergenic | 55.0% | |
| ! | TGGTGGACACAACTCTGTCG+TGG | + | chr3_3:79341752-79341771 | Msa0475840:CDS | 55.0% |
| TGGCAATCAGGGCCTGAAAG+CGG | - | chr3_3:79341784-79341803 | None:intergenic | 55.0% | |
| GGTGAAGGACGGAGAGTGGA+GGG | - | chr3_3:79336968-79336987 | None:intergenic | 60.0% | |
| GTGGTTCGAGCGGTGAAGGA+CGG | - | chr3_3:79336979-79336998 | None:intergenic | 60.0% | |
| CGAAGTGGTTCGAGCGGTGA+AGG | - | chr3_3:79336983-79337002 | None:intergenic | 60.0% | |
| !!! | TCTCTTGGTTTTGGCGGCGG+AGG | - | chr3_3:79337029-79337048 | None:intergenic | 60.0% |
| ACTCACTCGTATCTCCGCCG+CGG | + | chr3_3:79337048-79337067 | Msa0475840:CDS | 60.0% | |
| ! | CTTTTCTCTTTGCGGCGCGG+TGG | - | chr3_3:79337083-79337102 | None:intergenic | 60.0% |
| CACCGCGCCGCAAAGAGAAA+AGG | + | chr3_3:79337081-79337100 | Msa0475840:CDS | 60.0% | |
| CTCCGGTACTGCATTGTCGC+CGG | + | chr3_3:79337325-79337344 | Msa0475840:CDS | 60.0% | |
| GATGATAGCCGGTGGGACTG+AGG | + | chr3_3:79337759-79337778 | Msa0475840:CDS | 60.0% | |
| AATCGCAGCCTCAGTCCCAC+CGG | - | chr3_3:79337770-79337789 | None:intergenic | 60.0% | |
| TGCGGGAGATCTAGTGCACC+GGG | - | chr3_3:79338192-79338211 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+AGG | + | chr3_3:79338204-79338223 | Msa0475840:intron | 60.0% | |
| ACGCCGAGTCCGTCAGATCT+TGG | - | chr3_3:79338491-79338510 | None:intergenic | 60.0% | |
| CGGCATCTTCAAGGCTGCTC+TGG | - | chr3_3:79338526-79338545 | None:intergenic | 60.0% | |
| AGATGCCGGTGTGTCTCCTG+AGG | + | chr3_3:79338538-79338557 | Msa0475840:CDS | 60.0% | |
| GCGGTCTGCACACATGGTGT+TGG | + | chr3_3:79338960-79338979 | Msa0475840:intron | 60.0% | |
| ! | GCACACATGGTGTTGGGGTG+TGG | + | chr3_3:79338967-79338986 | Msa0475840:intron | 60.0% |
| ! | GGTCACTGTCTTGGTGCAGC+TGG | + | chr3_3:79340661-79340680 | Msa0475840:CDS | 60.0% |
| ! | CACTGTCTTGGTGCAGCTGG+CGG | + | chr3_3:79340664-79340683 | Msa0475840:CDS | 60.0% |
| ! | TCTTGGTGCAGCTGGCGGTT+TGG | + | chr3_3:79340669-79340688 | Msa0475840:CDS | 60.0% |
| !! | CGATGGTGGGACCCACTTAG+TGG | + | chr3_3:79340956-79340975 | Msa0475840:intron | 60.0% |
| GGTGGGACCCACTTAGTGGT+AGG | + | chr3_3:79340960-79340979 | Msa0475840:intron | 60.0% | |
| GCTTTCAGGCCCTGATTGCC+AGG | + | chr3_3:79341783-79341802 | Msa0475840:exon | 60.0% | |
| CGGTGAAGGACGGAGAGTGG+AGG | - | chr3_3:79336969-79336988 | None:intergenic | 65.0% | |
| GAGCGGTGAAGGACGGAGAG+TGG | - | chr3_3:79336972-79336991 | None:intergenic | 65.0% | |
| !!! | CTTGGTTTTGGCGGCGGAGG+TGG | - | chr3_3:79337026-79337045 | None:intergenic | 65.0% |
| TTCTCTTTGCGGCGCGGTGG+TGG | - | chr3_3:79337080-79337099 | None:intergenic | 65.0% | |
| TGCCGGTGTGTCTCCTGAGG+AGG | + | chr3_3:79338541-79338560 | Msa0475840:CDS | 65.0% | |
| ! | TTGCACGCAGCAGGGGGTGT+GGG | + | chr3_3:79339902-79339921 | Msa0475840:intron | 65.0% |
| ! | CAGCAGGGGGTGTGGGGAAA+GGG | + | chr3_3:79339909-79339928 | Msa0475840:intron | 65.0% |
| !! | GGTTTTGGCGGCGGAGGTGG+CGG | - | chr3_3:79337023-79337042 | None:intergenic | 70.0% |
| ! | TCTTTGCGGCGCGGTGGTGG+TGG | - | chr3_3:79337077-79337096 | None:intergenic | 70.0% |
| CTTGCACGCAGCAGGGGGTG+TGG | + | chr3_3:79339901-79339920 | Msa0475840:intron | 70.0% | |
| ! | TGCACGCAGCAGGGGGTGTG+GGG | + | chr3_3:79339903-79339922 | Msa0475840:intron | 70.0% |
| ! | GCAGCAGGGGGTGTGGGGAA+AGG | + | chr3_3:79339908-79339927 | Msa0475840:intron | 70.0% |
| ! | GGCGGAGGTGGCGGCATTGG+AGG | - | chr3_3:79337014-79337033 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGTGACCGCGG+CGG | - | chr3_3:79337065-79337084 | None:intergenic | 75.0% |
| !! | CGCGGTGGTGGTGGTGACCG+CGG | - | chr3_3:79337068-79337087 | None:intergenic | 75.0% |
| !! | GGCGGCGGAGGTGGCGGCAT+TGG | - | chr3_3:79337017-79337036 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 79336757 | 79342218 | 79336757 | ID=Msa0475840;Name=Msa0475840 |
| chr3_3 | mRNA | 79336757 | 79342218 | 79336757 | ID=Msa0475840-mRNA-1;Parent=Msa0475840;Name=Msa0475840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=178|1|1|1|1|1|7|421|472 |
| chr3_3 | exon | 79336757 | 79337396 | 79336757 | ID=Msa0475840-mRNA-1:exon:21517;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79337490 | 79337921 | 79337490 | ID=Msa0475840-mRNA-1:exon:21518;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79338389 | 79338562 | 79338389 | ID=Msa0475840-mRNA-1:exon:21519;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79340416 | 79340529 | 79340416 | ID=Msa0475840-mRNA-1:exon:21520;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79340652 | 79340753 | 79340652 | ID=Msa0475840-mRNA-1:exon:21521;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79341529 | 79341595 | 79341529 | ID=Msa0475840-mRNA-1:exon:21522;Parent=Msa0475840-mRNA-1 |
| chr3_3 | exon | 79341730 | 79342218 | 79341730 | ID=Msa0475840-mRNA-1:exon:21523;Parent=Msa0475840-mRNA-1 |
| chr3_3 | five_prime_UTR | 79336757 | 79336934 | 79336757 | ID=Msa0475840-mRNA-1:five_prime_utr;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79336935 | 79337396 | 79336935 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79337490 | 79337921 | 79337490 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79338389 | 79338562 | 79338389 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79340416 | 79340529 | 79340416 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79340652 | 79340753 | 79340652 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79341529 | 79341595 | 79341529 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | CDS | 79341730 | 79341797 | 79341730 | ID=Msa0475840-mRNA-1:cds;Parent=Msa0475840-mRNA-1 |
| chr3_3 | three_prime_UTR | 79341798 | 79342218 | 79341798 | ID=Msa0475840-mRNA-1:three_prime_utr;Parent=Msa0475840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
