Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090110 | sp|Q6S591|JAG_ARATH | 54.795 | 146 | 48 | 4 | 82 | 223 | 1 | 132 | 2.37e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090110 | A0A072VQB0 | 92.778 | 360 | 6 | 5 | 3 | 357 | 30 | 374 | 0.0 | 669 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043720 | Msa0090110 | 0.980800 | 4.617076e-151 | -8.615850e-47 |
| Msa0090110 | Msa0137580 | 0.843625 | 1.248910e-58 | -8.615850e-47 |
| Msa0090110 | Msa0182580 | 0.905981 | 2.414844e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090110 | MtrunA17_Chr1g0209781 | 96.815 | 157 | 1 | 2 | 202 | 357 | 1 | 154 | 1.82e-105 | 306 |
| Msa0090110 | MtrunA17_Chr1g0209791 | 100.000 | 71 | 0 | 0 | 115 | 185 | 7 | 77 | 7.88e-47 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090110 | AT1G68480.1 | 54.795 | 146 | 48 | 4 | 82 | 223 | 1 | 132 | 2.41e-36 | 132 |
| Msa0090110 | AT1G13400.1 | 40.807 | 223 | 91 | 13 | 85 | 299 | 5 | 194 | 3.25e-24 | 99.0 |
Find 96 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAATTGTTAAGATCTAA+TGG | 0.262058 | 1_2:+71970613 | None:intergenic |
| TTGATCAATGCTGCTGAATT+AGG | 0.273273 | 1_2:+71968631 | None:intergenic |
| AATTGGGGAAGGAGCTATTC+AGG | 0.281026 | 1_2:-71968706 | Msa0090110:CDS |
| CCCACATGATATTCATTCAT+TGG | 0.354688 | 1_2:+71968898 | None:intergenic |
| GATGAACCTGAGAAATATCT+TGG | 0.355971 | 1_2:+71969027 | None:intergenic |
| TATGGAAGGGACATTGAATT+GGG | 0.356851 | 1_2:-71968722 | Msa0090110:CDS |
| TTAATTTGTTGGCAGGTTGC+AGG | 0.357498 | 1_2:-71969997 | Msa0090110:intron |
| TATCTTCCCTTCTAAAAGAA+AGG | 0.375927 | 1_2:-71970832 | Msa0090110:CDS |
| GATGGCTGTGGTGGTGGTGG+TGG | 0.384243 | 1_2:+71968988 | None:intergenic |
| TCTGTAAATCTCAGGCTCTT+GGG | 0.385516 | 1_2:-71969898 | Msa0090110:CDS |
| GGAATAAAACCTTGTCTAAC+CGG | 0.387416 | 1_2:+71968778 | None:intergenic |
| CCAGCTCCCTCTCACCTTGT+AGG | 0.387947 | 1_2:-71969501 | Msa0090110:CDS |
| TCCTTCCCACCACTACTTCC+TGG | 0.390896 | 1_2:+71968757 | None:intergenic |
| GGTTGAGATGGCTGTGGTGG+TGG | 0.391710 | 1_2:+71968982 | None:intergenic |
| TGATCTCCCATGTTATTTGC+TGG | 0.392930 | 1_2:+71969069 | None:intergenic |
| TGAGATGGCTGTGGTGGTGG+TGG | 0.393007 | 1_2:+71968985 | None:intergenic |
| ATATGGAAGGGACATTGAAT+TGG | 0.404608 | 1_2:-71968723 | Msa0090110:CDS |
| TTCTGTAAATCTCAGGCTCT+TGG | 0.411398 | 1_2:-71969899 | Msa0090110:CDS |
| GCAAATTGTTAAGATCTAAT+GGG | 0.416673 | 1_2:+71970614 | None:intergenic |
| CACAACATGAACTATGTTGC+AGG | 0.424362 | 1_2:-71968841 | Msa0090110:CDS |
| ATATAGCTTGCTGTTGGTAT+TGG | 0.426802 | 1_2:+71969093 | None:intergenic |
| TTCTTTCTGTCTCTCTCTGT+CGG | 0.437119 | 1_2:-71970786 | Msa0090110:CDS |
| CGGGTAGATCAGTGTCTTCA+AGG | 0.439966 | 1_2:+71970557 | None:intergenic |
| AGCTATTCAGGAGGAGGAGG+AGG | 0.443032 | 1_2:-71968694 | Msa0090110:CDS |
| AAATATCTTGGGAATCTCAT+AGG | 0.445139 | 1_2:+71969039 | None:intergenic |
| ATTCAGCAGCATTGATCAAT+CGG | 0.448010 | 1_2:-71968627 | Msa0090110:CDS |
| TTCGAGAGAGGAGGTGGCAG+AGG | 0.456623 | 1_2:-71970964 | Msa0090110:CDS |
| AGTTTGAGACTGCAATATAG+AGG | 0.457935 | 1_2:+71970890 | None:intergenic |
| ATCTTCCCTTCTAAAAGAAA+GGG | 0.459427 | 1_2:-71970831 | Msa0090110:CDS |
| GATGAATACTCTAGAGATCA+TGG | 0.470780 | 1_2:-71970589 | Msa0090110:CDS |
| TAGCTTGCTGTTGGTATTGG+TGG | 0.471374 | 1_2:+71969096 | None:intergenic |
| CTGTAAATCTCAGGCTCTTG+GGG | 0.476136 | 1_2:-71969897 | Msa0090110:CDS |
| AGTTCATGTTGTGATATTGC+TGG | 0.481239 | 1_2:+71968851 | None:intergenic |
| AGATTCCCAAGATATTTCTC+AGG | 0.488336 | 1_2:-71969033 | Msa0090110:CDS |
| AGGAGCTATTCAGGAGGAGG+AGG | 0.489907 | 1_2:-71968697 | Msa0090110:CDS |
| CCTCAAGTTCTGTAAATCTC+AGG | 0.490774 | 1_2:-71969906 | Msa0090110:CDS |
| CAGCTCCCTCTCACCTTGTA+GGG | 0.493565 | 1_2:-71969500 | Msa0090110:intron |
| GAAGGATCATCATCAAGATA+TGG | 0.494180 | 1_2:-71968740 | Msa0090110:CDS |
| CTTGCTGTTGGTATTGGTGG+TGG | 0.494554 | 1_2:+71969099 | None:intergenic |
| GAGAGATTCGAGAGAGGAGG+TGG | 0.495018 | 1_2:-71970970 | Msa0090110:CDS |
| ATGAACCTGAGAAATATCTT+GGG | 0.497678 | 1_2:+71969028 | None:intergenic |
| GTAGGTGAAGAGTACAGATA+TGG | 0.504476 | 1_2:+71968961 | None:intergenic |
| TGATCTCTAGAGTATTCATC+AGG | 0.517140 | 1_2:+71970592 | None:intergenic |
| AGGTGAGAGGGAGCTGGTTG+TGG | 0.522713 | 1_2:+71969507 | None:intergenic |
| CTGAGATTTACAGAACTTGA+GGG | 0.524443 | 1_2:+71969907 | None:intergenic |
| TGTTGTGATATTGCTGGTGG+TGG | 0.527644 | 1_2:+71968857 | None:intergenic |
| TTGATCAATCGGTTTCAAGA+TGG | 0.529982 | 1_2:-71968616 | Msa0090110:CDS |
| GTGCAAGGTTATGATCGTTA+CGG | 0.551633 | 1_2:+71969529 | None:intergenic |
| ATGAACTATGTTGCAGGTGC+AGG | 0.551767 | 1_2:-71968835 | Msa0090110:CDS |
| AAATGTGTAGGGAAAGACAC+TGG | 0.553627 | 1_2:+71968934 | None:intergenic |
| CTATATTCCAGCAAATAACA+TGG | 0.555865 | 1_2:-71969076 | Msa0090110:CDS |
| AGAGAGAGATTCGAGAGAGG+AGG | 0.556113 | 1_2:-71970973 | Msa0090110:CDS |
| AGAAGGGAAGATAAAACTAG+AGG | 0.558231 | 1_2:+71970842 | None:intergenic |
| GCTGGAATATAGCTTGCTGT+TGG | 0.559096 | 1_2:+71969087 | None:intergenic |
| TCCAATGAATGAATATCATG+TGG | 0.567802 | 1_2:-71968899 | Msa0090110:CDS |
| TTTATTCCAGGAAGTAGTGG+TGG | 0.567911 | 1_2:-71968763 | Msa0090110:CDS |
| CATTGGATACATACCCTACA+AGG | 0.569471 | 1_2:+71969487 | None:intergenic |
| GAAAGAGAGAGATTCGAGAG+AGG | 0.570941 | 1_2:-71970976 | Msa0090110:CDS |
| TCCAGGAAGTAGTGGTGGGA+AGG | 0.571603 | 1_2:-71968758 | Msa0090110:CDS |
| ATGGAAGGGACATTGAATTG+GGG | 0.575489 | 1_2:-71968721 | Msa0090110:CDS |
| AGGATGGAAAAGATGAGTGT+GGG | 0.577946 | 1_2:-71969955 | Msa0090110:CDS |
| TATGTTGCAGGTGCAGGTGG+TGG | 0.578820 | 1_2:-71968829 | Msa0090110:CDS |
| GATCATCATCAAGATATGGA+AGG | 0.580590 | 1_2:-71968736 | Msa0090110:CDS |
| CCTGAGATTTACAGAACTTG+AGG | 0.580726 | 1_2:+71969906 | None:intergenic |
| TATTCATTCATTGGATGCTG+AGG | 0.581889 | 1_2:+71968907 | None:intergenic |
| AACTATGTTGCAGGTGCAGG+TGG | 0.582825 | 1_2:-71968832 | Msa0090110:CDS |
| AAGGATGGAAAAGATGAGTG+TGG | 0.583920 | 1_2:-71969956 | Msa0090110:CDS |
| CCTACAAGGTGAGAGGGAGC+TGG | 0.588325 | 1_2:+71969501 | None:intergenic |
| TTACACTTGCATAGGTGCAC+CGG | 0.591451 | 1_2:-71968797 | Msa0090110:CDS |
| GAGTCGAGTTACACTTGCAT+AGG | 0.593277 | 1_2:-71968805 | Msa0090110:CDS |
| AGATCTAATGGGTTTCCTTG+CGG | 0.593490 | 1_2:+71970625 | None:intergenic |
| GGGAAAGACACTGGGCGTGT+AGG | 0.600436 | 1_2:+71968943 | None:intergenic |
| ATCATCATCAAGATATGGAA+GGG | 0.601576 | 1_2:-71968735 | Msa0090110:CDS |
| GAGTACAGATATGGTTGAGA+TGG | 0.603611 | 1_2:+71968970 | None:intergenic |
| GGAAGGAGCTATTCAGGAGG+AGG | 0.605635 | 1_2:-71968700 | Msa0090110:CDS |
| GCTGAGGAATCAAATGTGTA+GGG | 0.605957 | 1_2:+71968923 | None:intergenic |
| AGGGAGCTGGTTGTGGTGCA+AGG | 0.607305 | 1_2:+71969514 | None:intergenic |
| TATAGAGGCTAGTTGAGTGA+TGG | 0.609547 | 1_2:+71970905 | None:intergenic |
| TGGAAAAGATGAGTGTGGGA+AGG | 0.610222 | 1_2:-71969951 | Msa0090110:CDS |
| TATGGTTGAGATGGCTGTGG+TGG | 0.618669 | 1_2:+71968979 | None:intergenic |
| ATAGGTGCACCGGTTAGACA+AGG | 0.620734 | 1_2:-71968787 | Msa0090110:CDS |
| TTATTCCAGGAAGTAGTGGT+GGG | 0.630975 | 1_2:-71968762 | Msa0090110:CDS |
| CTTGAAGACACTGATCTACC+CGG | 0.633510 | 1_2:-71970556 | Msa0090110:intron |
| TATATTCCAGCAAATAACAT+GGG | 0.637814 | 1_2:-71969075 | Msa0090110:CDS |
| AATGTGTAGGGAAAGACACT+GGG | 0.638777 | 1_2:+71968935 | None:intergenic |
| TGCTGAGGAATCAAATGTGT+AGG | 0.639346 | 1_2:+71968922 | None:intergenic |
| GGAAGACTAGCTGACGTGCA+TGG | 0.639350 | 1_2:+71969550 | None:intergenic |
| TACATACCCTACAAGGTGAG+AGG | 0.640151 | 1_2:+71969494 | None:intergenic |
| ACATACCCTACAAGGTGAGA+GGG | 0.643709 | 1_2:+71969495 | None:intergenic |
| TCATGTTGTGATATTGCTGG+TGG | 0.643930 | 1_2:+71968854 | None:intergenic |
| AAGGGACATTGAATTGGGGA+AGG | 0.649883 | 1_2:-71968717 | Msa0090110:CDS |
| CCAATGAATGAATATCATGT+GGG | 0.659875 | 1_2:-71968898 | Msa0090110:CDS |
| AGATATGGTTGAGATGGCTG+TGG | 0.660186 | 1_2:+71968976 | None:intergenic |
| AGAATAAAACAACAAATGTG+GGG | 0.662187 | 1_2:-71972657 | None:intergenic |
| TGTAAATCTCAGGCTCTTGG+GGG | 0.671796 | 1_2:-71969896 | Msa0090110:CDS |
| TGGGGAAGGAGCTATTCAGG+AGG | 0.735271 | 1_2:-71968703 | Msa0090110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTATATTTTATTTT+TGG | - | chr1_2:71970980-71970999 | Msa0090110:CDS | 0.0% |
| !!! | ATATTTTCTAAAGAATAAAA+AGG | + | chr1_2:71968949-71968968 | None:intergenic | 10.0% |
| !!! | AAAATATTTTCTTTAAATTG+AGG | - | chr1_2:71968962-71968981 | Msa0090110:CDS | 10.0% |
| !!! | AAAGTTAAATAAATTTTTAC+CGG | + | chr1_2:71970717-71970736 | None:intergenic | 10.0% |
| !!! | TAAATAAAGATTTGATTTAA+AGG | + | chr1_2:71971439-71971458 | None:intergenic | 10.0% |
| !!! | ATCAACTTTTTCTTATAAAT+AGG | + | chr1_2:71969552-71969571 | None:intergenic | 15.0% |
| !! | GTTAAATGTTTCTTATTAAT+AGG | - | chr1_2:71969651-71969670 | Msa0090110:intron | 15.0% |
| !!! | AAGTTAAATAAATTTTTACC+GGG | + | chr1_2:71970716-71970735 | None:intergenic | 15.0% |
| !! | ACAATTTAATAAGAAAGAAA+GGG | + | chr1_2:71971013-71971032 | None:intergenic | 15.0% |
| !! | AACAATTTAATAAGAAAGAA+AGG | + | chr1_2:71971014-71971033 | None:intergenic | 15.0% |
| !! | TAGAGGAAAAATAAATAAAA+AGG | - | chr1_2:71971110-71971129 | Msa0090110:intron | 15.0% |
| !! | AGAGGAAAAATAAATAAAAA+GGG | - | chr1_2:71971111-71971130 | Msa0090110:intron | 15.0% |
| !!! | TATAATTTGATGATGATATA+TGG | - | chr1_2:71971164-71971183 | Msa0090110:intron | 15.0% |
| !!! | ATAATTTGATGATGATATAT+GGG | - | chr1_2:71971165-71971184 | Msa0090110:intron | 15.0% |
| !!! | TCATTATTTTATTTTTGGTT+GGG | + | chr1_2:71971496-71971515 | None:intergenic | 15.0% |
| !!! | ACTAGTCATTATTTTATTTT+TGG | + | chr1_2:71971501-71971520 | None:intergenic | 15.0% |
| !! | CTAATTTATTTGTATGATAA+AGG | + | chr1_2:71971850-71971869 | None:intergenic | 15.0% |
| !! | TCATACAAATAAATTAGAAT+CGG | - | chr1_2:71971853-71971872 | Msa0090110:intron | 15.0% |
| !!! | AAGTAAAAACATTTGATTTA+GGG | + | chr1_2:71971957-71971976 | None:intergenic | 15.0% |
| !!! | AAAGTAAAAACATTTGATTT+AGG | + | chr1_2:71971958-71971977 | None:intergenic | 15.0% |
| !! | AAAATCATAACAATAGTATT+AGG | - | chr1_2:71972011-71972030 | Msa0090110:intron | 15.0% |
| !!! | GAAATATATGAATTGATTTA+GGG | + | chr1_2:71972060-71972079 | None:intergenic | 15.0% |
| !!! | TGAAATATATGAATTGATTT+AGG | + | chr1_2:71972061-71972080 | None:intergenic | 15.0% |
| !! | ATGATGATATATGTATGTTT+GGG | + | chr1_2:71968903-71968922 | None:intergenic | 20.0% |
| !!! | CAATATGAAATTGTTTCTTT+TGG | + | chr1_2:71969189-71969208 | None:intergenic | 20.0% |
| !! | TAACATAAACTTACCATTTA+AGG | - | chr1_2:71969967-71969986 | Msa0090110:CDS | 20.0% |
| !! | AAATGATCATAGAAAGTAAT+GGG | + | chr1_2:71970053-71970072 | None:intergenic | 20.0% |
| !! | AAGATAAATATGAATGAGAA+AGG | + | chr1_2:71970525-71970544 | None:intergenic | 20.0% |
| !! | GTGATTATGGAATATAATAT+AGG | + | chr1_2:71970834-71970853 | None:intergenic | 20.0% |
| !! | AAAGTATAATAAGTCTTTCA+TGG | + | chr1_2:71970862-71970881 | None:intergenic | 20.0% |
| !! | CTTCAAATATATTGTCATAA+TGG | - | chr1_2:71971078-71971097 | Msa0090110:intron | 20.0% |
| !!! | ATATATTGTCATAATGGAAA+AGG | - | chr1_2:71971084-71971103 | Msa0090110:intron | 20.0% |
| !!! | GTCATTATTTTATTTTTGGT+TGG | + | chr1_2:71971497-71971516 | None:intergenic | 20.0% |
| !! | GTATTAATTAAAGGAAAAAG+TGG | + | chr1_2:71971794-71971813 | None:intergenic | 20.0% |
| !! | ATATGTGTAGATGAAATTAA+AGG | + | chr1_2:71971827-71971846 | None:intergenic | 20.0% |
| !! | GCTTGAAAATTAAAAGTAAT+TGG | + | chr1_2:71971991-71972010 | None:intergenic | 20.0% |
| !! | AAAGAAAATGGAACTATAAA+TGG | + | chr1_2:71972120-71972139 | None:intergenic | 20.0% |
| ! | GCATTTATACTAAGAAAGAA+AGG | + | chr1_2:71968842-71968861 | None:intergenic | 25.0% |
| ! | TGATGATATATGTATGTTTG+GGG | + | chr1_2:71968902-71968921 | None:intergenic | 25.0% |
| ! | CATGATGATATATGTATGTT+TGG | + | chr1_2:71968904-71968923 | None:intergenic | 25.0% |
| ! | TTAAGGAGAATGTTAACATA+AGG | + | chr1_2:71969292-71969311 | None:intergenic | 25.0% |
| ! | TTCAGATACTAATATATCTC+CGG | + | chr1_2:71969479-71969498 | None:intergenic | 25.0% |
| ! | TCTGAATATCATAATTACGA+CGG | - | chr1_2:71969493-71969512 | Msa0090110:intron | 25.0% |
| ! | AAAGTAAATAATACTCTCTC+CGG | - | chr1_2:71969525-71969544 | Msa0090110:CDS | 25.0% |
| !! | CTTTTTCTTATAAATAGGAC+CGG | + | chr1_2:71969547-71969566 | None:intergenic | 25.0% |
| ! | CATTGTATAAATGATGTAGT+TGG | + | chr1_2:71969621-71969640 | None:intergenic | 25.0% |
| ! | ATGTTTCTTATTAATAGGAC+CGG | - | chr1_2:71969656-71969675 | Msa0090110:intron | 25.0% |
| ! | TAAAAAACAAATACTCCTTC+CGG | + | chr1_2:71969678-71969697 | None:intergenic | 25.0% |
| ! | TAGGGAGATTCAAATTTAAA+GGG | + | chr1_2:71969786-71969805 | None:intergenic | 25.0% |
| ! | GAGATTAATCATTCAATCTA+GGG | + | chr1_2:71969804-71969823 | None:intergenic | 25.0% |
| ! | AGAGATTAATCATTCAATCT+AGG | + | chr1_2:71969805-71969824 | None:intergenic | 25.0% |
| !!! | TGGAGTTTTTGACTTTTTTA+AGG | + | chr1_2:71969931-71969950 | None:intergenic | 25.0% |
| !!! | GTTATCAATGCTTTGAAAAT+TGG | + | chr1_2:71969951-71969970 | None:intergenic | 25.0% |
| ! | AAAGAAATAGTACCTATTTC+GGG | + | chr1_2:71970030-71970049 | None:intergenic | 25.0% |
| ! | GAAAGAAATAGTACCTATTT+CGG | + | chr1_2:71970031-71970050 | None:intergenic | 25.0% |
| ! | CAAATGATCATAGAAAGTAA+TGG | + | chr1_2:71970054-71970073 | None:intergenic | 25.0% |
| ! | CATTACTTTCTATGATCATT+TGG | - | chr1_2:71970052-71970071 | Msa0090110:intron | 25.0% |
| ! | CACAAAATTGAATGAACAAT+AGG | + | chr1_2:71970221-71970240 | None:intergenic | 25.0% |
| !! | TATCTATTTGTTCCATTTTC+AGG | - | chr1_2:71970600-71970619 | Msa0090110:CDS | 25.0% |
| ! | GCAAATTGTTAAGATCTAAT+GGG | + | chr1_2:71970640-71970659 | None:intergenic | 25.0% |
| ! | ATGGAAAAAGATAAAAGAGA+AGG | + | chr1_2:71971039-71971058 | None:intergenic | 25.0% |
| ! | ATGATGATATATGGGAAATT+GGG | - | chr1_2:71971173-71971192 | Msa0090110:intron | 25.0% |
| !! | AAATTGGGAATGTTGATTAA+GGG | - | chr1_2:71971188-71971207 | Msa0090110:intron | 25.0% |
| !!! | GGATATTGTTGTTAATTTGT+TGG | - | chr1_2:71971243-71971262 | Msa0090110:intron | 25.0% |
| !! | GAAGTACTAAAATTCTTTCT+TGG | - | chr1_2:71971577-71971596 | Msa0090110:intron | 25.0% |
| !!! | TTTCTTGGTTTTGATTTGAA+AGG | - | chr1_2:71971592-71971611 | Msa0090110:intron | 25.0% |
| ! | TGATGTGTATATATTTGTGT+TGG | - | chr1_2:71971640-71971659 | Msa0090110:intron | 25.0% |
| ! | GATGTGTATATATTTGTGTT+GGG | - | chr1_2:71971641-71971660 | Msa0090110:intron | 25.0% |
| ! | TATTTGTGTTGGGTTTAATT+TGG | - | chr1_2:71971651-71971670 | Msa0090110:intron | 25.0% |
| !! | AGGAGCAAAGTATTAATTAA+AGG | + | chr1_2:71971803-71971822 | None:intergenic | 25.0% |
| ! | GGCATCATGATATAAATTAA+TGG | - | chr1_2:71972032-71972051 | Msa0090110:intron | 25.0% |
| ! | TATTTCATGTATGTCCATTA+TGG | - | chr1_2:71972074-71972093 | Msa0090110:intron | 25.0% |
| ! | ACAACATCTGAAAAAGAAAA+TGG | + | chr1_2:71972132-71972151 | None:intergenic | 25.0% |
| ! | TATATTCCAGCAAATAACAT+GGG | - | chr1_2:71972176-71972195 | Msa0090110:intron | 25.0% |
| GCTATCAGTATCTATCATTA+GGG | + | chr1_2:71968655-71968674 | None:intergenic | 30.0% | |
| TGCTATCAGTATCTATCATT+AGG | + | chr1_2:71968656-71968675 | None:intergenic | 30.0% | |
| TGCTACTATCTTTCATTCTT+AGG | - | chr1_2:71968859-71968878 | Msa0090110:CDS | 30.0% | |
| GCTACTATCTTTCATTCTTA+GGG | - | chr1_2:71968860-71968879 | Msa0090110:CDS | 30.0% | |
| !!! | TAGACATTTTTTTCCCTTCT+AGG | - | chr1_2:71969045-71969064 | Msa0090110:CDS | 30.0% |
| !!! | AGACATTTTTTTCCCTTCTA+GGG | - | chr1_2:71969046-71969065 | Msa0090110:CDS | 30.0% |
| TTCAAGAATTAAACCCATAG+TGG | - | chr1_2:71969435-71969454 | Msa0090110:intron | 30.0% | |
| CTGAATATCATAATTACGAC+GGG | - | chr1_2:71969494-71969513 | Msa0090110:intron | 30.0% | |
| ACTTGACAGATTTAAGTATG+TGG | - | chr1_2:71969715-71969734 | Msa0090110:intron | 30.0% | |
| CTAGGGAGATTCAAATTTAA+AGG | + | chr1_2:71969787-71969806 | None:intergenic | 30.0% | |
| GATTAATCTCTAACTTCTGA+CGG | - | chr1_2:71969814-71969833 | Msa0090110:intron | 30.0% | |
| ATTAATCTCTAACTTCTGAC+GGG | - | chr1_2:71969815-71969834 | Msa0090110:intron | 30.0% | |
| !! | TATCCTAAAAGCACTCTTTA+AGG | - | chr1_2:71969884-71969903 | Msa0090110:intron | 30.0% |
| !!! | AATCCTTAAAGAGTGCTTTT+AGG | + | chr1_2:71969890-71969909 | None:intergenic | 30.0% |
| CATTGTTTAGTGACCTTAAA+TGG | + | chr1_2:71969983-71970002 | None:intergenic | 30.0% | |
| ! | TGAAAGTCTCACAAATTTTG+TGG | - | chr1_2:71970383-71970402 | Msa0090110:intron | 30.0% |
| ! | TATCTTCCCTTCTAAAAGAA+AGG | - | chr1_2:71970419-71970438 | Msa0090110:intron | 30.0% |
| ! | ATCTTCCCTTCTAAAAGAAA+GGG | - | chr1_2:71970420-71970439 | Msa0090110:intron | 30.0% |
| !! | AAACACCCTTTCTTTTAGAA+GGG | + | chr1_2:71970428-71970447 | None:intergenic | 30.0% |
| ! | TAAACACCCTTTCTTTTAGA+AGG | + | chr1_2:71970429-71970448 | None:intergenic | 30.0% |
| GGAACAAATAGATATAGTGA+AGG | + | chr1_2:71970594-71970613 | None:intergenic | 30.0% | |
| GGCAAATTGTTAAGATCTAA+TGG | + | chr1_2:71970641-71970660 | None:intergenic | 30.0% | |
| TTTCATGGTATGTGTGATTA+TGG | + | chr1_2:71970847-71970866 | None:intergenic | 30.0% | |
| AGACTTATTATACTTTCCAC+AGG | - | chr1_2:71970866-71970885 | Msa0090110:CDS | 30.0% | |
| ATGGTCAAAAGAATATACCA+CGG | + | chr1_2:71970926-71970945 | None:intergenic | 30.0% | |
| ! | AATTATTGAGCACTGTTTCA+TGG | + | chr1_2:71970945-71970964 | None:intergenic | 30.0% |
| TTTAAAGAAGCTAGCAAGTA+TGG | + | chr1_2:71971058-71971077 | None:intergenic | 30.0% | |
| GATGATGATATATGGGAAAT+TGG | - | chr1_2:71971172-71971191 | Msa0090110:intron | 30.0% | |
| ! | GAAATTGGGAATGTTGATTA+AGG | - | chr1_2:71971187-71971206 | Msa0090110:intron | 30.0% |
| !! | ATTGTTGTTAATTTGTTGGC+AGG | - | chr1_2:71971247-71971266 | Msa0090110:intron | 30.0% |
| GTGTAGATGAAATTAAAGGA+AGG | + | chr1_2:71971823-71971842 | None:intergenic | 30.0% | |
| TACAAAACAATGAGCCATAA+TGG | + | chr1_2:71972091-71972110 | None:intergenic | 30.0% | |
| CTATATTCCAGCAAATAACA+TGG | - | chr1_2:71972175-71972194 | Msa0090110:intron | 30.0% | |
| AAATATCTTGGGAATCTCAT+AGG | + | chr1_2:71972215-71972234 | None:intergenic | 30.0% | |
| ATGAACCTGAGAAATATCTT+GGG | + | chr1_2:71972226-71972245 | None:intergenic | 30.0% | |
| TCCAATGAATGAATATCATG+TGG | - | chr1_2:71972352-71972371 | Msa0090110:intron | 30.0% | |
| CCAATGAATGAATATCATGT+GGG | - | chr1_2:71972353-71972372 | Msa0090110:intron | 30.0% | |
| ATCATCATCAAGATATGGAA+GGG | - | chr1_2:71972516-71972535 | Msa0090110:intron | 30.0% | |
| ! | GGTTTTTGCAATCTAACTTG+GGG | + | chr1_2:71968634-71968653 | None:intergenic | 35.0% |
| ! | GGGTTTTTGCAATCTAACTT+GGG | + | chr1_2:71968635-71968654 | None:intergenic | 35.0% |
| ! | AGGGTTTTTGCAATCTAACT+TGG | + | chr1_2:71968636-71968655 | None:intergenic | 35.0% |
| ! | CTTAGACTTGCTTCATAGAA+AGG | + | chr1_2:71968680-71968699 | None:intergenic | 35.0% |
| ! | GTAGAATTTTACACCCAGAA+AGG | - | chr1_2:71968708-71968727 | Msa0090110:CDS | 35.0% |
| TTTGAGAAACAGGTCATGTA+TGG | + | chr1_2:71968754-71968773 | None:intergenic | 35.0% | |
| AGAAAGGAAGACAAGACATA+GGG | + | chr1_2:71968826-71968845 | None:intergenic | 35.0% | |
| AAGAAAGGAAGACAAGACAT+AGG | + | chr1_2:71968827-71968846 | None:intergenic | 35.0% | |
| ! | ATGTATGTTTGGGGCATTAA+AGG | + | chr1_2:71968893-71968912 | None:intergenic | 35.0% |
| !!! | TAGTCGTTTTTTCCCTAGAA+GGG | + | chr1_2:71969061-71969080 | None:intergenic | 35.0% |
| !!! | ATAGTCGTTTTTTCCCTAGA+AGG | + | chr1_2:71969062-71969081 | None:intergenic | 35.0% |
| AAAACGACTATATCCAGAAG+TGG | - | chr1_2:71969071-71969090 | Msa0090110:CDS | 35.0% | |
| ! | TTTTAACATGTGCCCTAATG+AGG | + | chr1_2:71969163-71969182 | None:intergenic | 35.0% |
| ACTCAGACACATTAGCATTA+AGG | + | chr1_2:71969309-71969328 | None:intergenic | 35.0% | |
| TTCTTATTAATAGGACCGGA+AGG | - | chr1_2:71969660-71969679 | Msa0090110:intron | 35.0% | |
| ACACACATAGAAGAACACTT+AGG | - | chr1_2:71969751-71969770 | Msa0090110:intron | 35.0% | |
| TTAATCTCTAACTTCTGACG+GGG | - | chr1_2:71969816-71969835 | Msa0090110:intron | 35.0% | |
| TCATTAGCATTTCCCGAAAT+AGG | - | chr1_2:71970015-71970034 | Msa0090110:intron | 35.0% | |
| TTGAATGAACAATAGGACAG+TGG | + | chr1_2:71970214-71970233 | None:intergenic | 35.0% | |
| ! | AATTTTGTGTGTGAGTGTGT+GGG | - | chr1_2:71970232-71970251 | Msa0090110:intron | 35.0% |
| ! | AGTTTGAGACTGCAATATAG+AGG | + | chr1_2:71970364-71970383 | None:intergenic | 35.0% |
| AGAAGGGAAGATAAAACTAG+AGG | + | chr1_2:71970412-71970431 | None:intergenic | 35.0% | |
| ! | TGAGAAAGGTGTAGTATAGT+GGG | + | chr1_2:71970511-71970530 | None:intergenic | 35.0% |
| ! | ATGAGAAAGGTGTAGTATAG+TGG | + | chr1_2:71970512-71970531 | None:intergenic | 35.0% |
| !! | TGATCTCTAGAGTATTCATC+AGG | + | chr1_2:71970662-71970681 | None:intergenic | 35.0% |
| ! | GATGAATACTCTAGAGATCA+TGG | - | chr1_2:71970662-71970681 | Msa0090110:intron | 35.0% |
| !! | GTGTTCAATTTTGTTTCCTG+TGG | + | chr1_2:71970885-71970904 | None:intergenic | 35.0% |
| TGGTCAAAAGAATATACCAC+GGG | + | chr1_2:71970925-71970944 | None:intergenic | 35.0% | |
| ! | CATAATGGAAAAGGAGTTAG+AGG | - | chr1_2:71971093-71971112 | Msa0090110:intron | 35.0% |
| ! | TGTTGATTAAGGGAAAGTAG+TGG | - | chr1_2:71971198-71971217 | Msa0090110:intron | 35.0% |
| GGTTGCAGGAAAAAGAAAAA+CGG | - | chr1_2:71971268-71971287 | Msa0090110:intron | 35.0% | |
| CTGAGATTTACAGAACTTGA+GGG | + | chr1_2:71971347-71971366 | None:intergenic | 35.0% | |
| ! | ATGAAAAGAATAGCTAGCCT+TGG | + | chr1_2:71971399-71971418 | None:intergenic | 35.0% |
| TAGAATCGGATAAGATGTTG+TGG | - | chr1_2:71971867-71971886 | Msa0090110:intron | 35.0% | |
| AGAATCGGATAAGATGTTGT+GGG | - | chr1_2:71971868-71971887 | Msa0090110:intron | 35.0% | |
| AACCCACCGTACTAAATTAA+TGG | - | chr1_2:71971929-71971948 | Msa0090110:intron | 35.0% | |
| CTCCATTAATTTAGTACGGT+GGG | + | chr1_2:71971934-71971953 | None:intergenic | 35.0% | |
| AGGGCTCCATTAATTTAGTA+CGG | + | chr1_2:71971938-71971957 | None:intergenic | 35.0% | |
| !! | ATATAGCTTGCTGTTGGTAT+TGG | + | chr1_2:71972161-71972180 | None:intergenic | 35.0% |
| AGATTCCCAAGATATTTCTC+AGG | - | chr1_2:71972218-71972237 | Msa0090110:intron | 35.0% | |
| GATGAACCTGAGAAATATCT+TGG | + | chr1_2:71972227-71972246 | None:intergenic | 35.0% | |
| TATTCATTCATTGGATGCTG+AGG | + | chr1_2:71972347-71972366 | None:intergenic | 35.0% | |
| CCCACATGATATTCATTCAT+TGG | + | chr1_2:71972356-71972375 | None:intergenic | 35.0% | |
| AGTTCATGTTGTGATATTGC+TGG | + | chr1_2:71972403-71972422 | None:intergenic | 35.0% | |
| GGAATAAAACCTTGTCTAAC+CGG | + | chr1_2:71972476-71972495 | None:intergenic | 35.0% | |
| !!! | GTTAGACAAGGTTTTATTCC+AGG | - | chr1_2:71972476-71972495 | Msa0090110:intron | 35.0% |
| GAAGGATCATCATCAAGATA+TGG | - | chr1_2:71972511-71972530 | Msa0090110:intron | 35.0% | |
| GATCATCATCAAGATATGGA+AGG | - | chr1_2:71972515-71972534 | Msa0090110:intron | 35.0% | |
| ATATGGAAGGGACATTGAAT+TGG | - | chr1_2:71972528-71972547 | Msa0090110:intron | 35.0% | |
| TATGGAAGGGACATTGAATT+GGG | - | chr1_2:71972529-71972548 | Msa0090110:intron | 35.0% | |
| TTGATCAATGCTGCTGAATT+AGG | + | chr1_2:71972623-71972642 | None:intergenic | 35.0% | |
| !! | ATTCAGCAGCATTGATCAAT+CGG | - | chr1_2:71972624-71972643 | Msa0090110:intron | 35.0% |
| ! | TTGATCAATCGGTTTCAAGA+TGG | - | chr1_2:71972635-71972654 | Msa0090110:intron | 35.0% |
| TGGGTGTAAAATTCTACCCA+GGG | + | chr1_2:71968705-71968724 | None:intergenic | 40.0% | |
| ! | GAATTTTACACCCAGAAAGG+AGG | - | chr1_2:71968711-71968730 | Msa0090110:CDS | 40.0% |
| TGGTTATTGTGCTAACAGAG+GGG | + | chr1_2:71968784-71968803 | None:intergenic | 40.0% | |
| GTGGTTATTGTGCTAACAGA+GGG | + | chr1_2:71968785-71968804 | None:intergenic | 40.0% | |
| ! | ATGTTTGGGGCATTAAAGGT+GGG | + | chr1_2:71968889-71968908 | None:intergenic | 40.0% |
| ! | TATGTTTGGGGCATTAAAGG+TGG | + | chr1_2:71968890-71968909 | None:intergenic | 40.0% |
| TCACTAACATGTGCCTCATT+AGG | - | chr1_2:71969147-71969166 | Msa0090110:intron | 40.0% | |
| CACTAACATGTGCCTCATTA+GGG | - | chr1_2:71969148-71969167 | Msa0090110:intron | 40.0% | |
| TTAAACCCATAGTGGCACAA+AGG | - | chr1_2:71969443-71969462 | Msa0090110:intron | 40.0% | |
| TAAACCCATAGTGGCACAAA+GGG | - | chr1_2:71969444-71969463 | Msa0090110:intron | 40.0% | |
| ! | CAATTTTGTGTGTGAGTGTG+TGG | - | chr1_2:71970231-71970250 | Msa0090110:intron | 40.0% |
| ! | ATTTTGTGTGTGAGTGTGTG+GGG | - | chr1_2:71970233-71970252 | Msa0090110:intron | 40.0% |
| ! | TATAGAGGCTAGTTGAGTGA+TGG | + | chr1_2:71970349-71970368 | None:intergenic | 40.0% |
| TTCTTTCTGTCTCTCTCTGT+CGG | - | chr1_2:71970465-71970484 | Msa0090110:intron | 40.0% | |
| ! | AGAAAGGTGTAGTATAGTGG+GGG | + | chr1_2:71970509-71970528 | None:intergenic | 40.0% |
| ! | GAGAAAGGTGTAGTATAGTG+GGG | + | chr1_2:71970510-71970529 | None:intergenic | 40.0% |
| !! | AGATCTAATGGGTTTCCTTG+CGG | + | chr1_2:71970629-71970648 | None:intergenic | 40.0% |
| GGTCAAAAGAATATACCACG+GGG | + | chr1_2:71970924-71970943 | None:intergenic | 40.0% | |
| CTCGTCGAAGTTGCTTAAAT+AGG | - | chr1_2:71971222-71971241 | Msa0090110:intron | 40.0% | |
| !! | TTAATTTGTTGGCAGGTTGC+AGG | - | chr1_2:71971254-71971273 | Msa0090110:intron | 40.0% |
| TGCAGGAAAAAGAAAAACGG+CGG | - | chr1_2:71971271-71971290 | Msa0090110:intron | 40.0% | |
| AAGGATGGAAAAGATGAGTG+TGG | - | chr1_2:71971295-71971314 | Msa0090110:intron | 40.0% | |
| AGGATGGAAAAGATGAGTGT+GGG | - | chr1_2:71971296-71971315 | Msa0090110:intron | 40.0% | |
| CCTGAGATTTACAGAACTTG+AGG | + | chr1_2:71971348-71971367 | None:intergenic | 40.0% | |
| CCTCAAGTTCTGTAAATCTC+AGG | - | chr1_2:71971345-71971364 | Msa0090110:intron | 40.0% | |
| TTCTGTAAATCTCAGGCTCT+TGG | - | chr1_2:71971352-71971371 | Msa0090110:intron | 40.0% | |
| TCTGTAAATCTCAGGCTCTT+GGG | - | chr1_2:71971353-71971372 | Msa0090110:intron | 40.0% | |
| !! | AAAAGAATAGCTAGCCTTGG+CGG | + | chr1_2:71971396-71971415 | None:intergenic | 40.0% |
| TGACATGTGACAACGTTTCA+TGG | + | chr1_2:71971538-71971557 | None:intergenic | 40.0% | |
| GAAAGGTCTTTCTCTTGTGT+TGG | - | chr1_2:71971609-71971628 | Msa0090110:intron | 40.0% | |
| !! | GGTTTAATTTGGTGCAGAGA+GGG | - | chr1_2:71971662-71971681 | Msa0090110:intron | 40.0% |
| GTGCAAGGTTATGATCGTTA+CGG | + | chr1_2:71971725-71971744 | None:intergenic | 40.0% | |
| CATTGGATACATACCCTACA+AGG | + | chr1_2:71971767-71971786 | None:intergenic | 40.0% | |
| AAGGAAAAAGTGGTGTGCAT+TGG | + | chr1_2:71971784-71971803 | None:intergenic | 40.0% | |
| GCTCCATTAATTTAGTACGG+TGG | + | chr1_2:71971935-71971954 | None:intergenic | 40.0% | |
| ! | TGATCTCCCATGTTATTTGC+TGG | + | chr1_2:71972185-71972204 | None:intergenic | 40.0% |
| GAGTACAGATATGGTTGAGA+TGG | + | chr1_2:71972284-71972303 | None:intergenic | 40.0% | |
| ! | GTAGGTGAAGAGTACAGATA+TGG | + | chr1_2:71972293-71972312 | None:intergenic | 40.0% |
| AATGTGTAGGGAAAGACACT+GGG | + | chr1_2:71972319-71972338 | None:intergenic | 40.0% | |
| AAATGTGTAGGGAAAGACAC+TGG | + | chr1_2:71972320-71972339 | None:intergenic | 40.0% | |
| GCTGAGGAATCAAATGTGTA+GGG | + | chr1_2:71972331-71972350 | None:intergenic | 40.0% | |
| TGCTGAGGAATCAAATGTGT+AGG | + | chr1_2:71972332-71972351 | None:intergenic | 40.0% | |
| TCATGTTGTGATATTGCTGG+TGG | + | chr1_2:71972400-71972419 | None:intergenic | 40.0% | |
| CACAACATGAACTATGTTGC+AGG | - | chr1_2:71972410-71972429 | Msa0090110:intron | 40.0% | |
| !!! | GGTTTTATTCCAGGAAGTAG+TGG | - | chr1_2:71972485-71972504 | Msa0090110:intron | 40.0% |
| TTTATTCCAGGAAGTAGTGG+TGG | - | chr1_2:71972488-71972507 | Msa0090110:intron | 40.0% | |
| TTATTCCAGGAAGTAGTGGT+GGG | - | chr1_2:71972489-71972508 | Msa0090110:intron | 40.0% | |
| ATGGAAGGGACATTGAATTG+GGG | - | chr1_2:71972530-71972549 | Msa0090110:intron | 40.0% | |
| TTTGCAATCTAACTTGGGGC+CGG | + | chr1_2:71968630-71968649 | None:intergenic | 45.0% | |
| GGGTGTAAAATTCTACCCAG+GGG | + | chr1_2:71968704-71968723 | None:intergenic | 45.0% | |
| CTGGGTGTAAAATTCTACCC+AGG | + | chr1_2:71968706-71968725 | None:intergenic | 45.0% | |
| TAGCTCAATGCCTCCTTTCT+GGG | + | chr1_2:71968724-71968743 | None:intergenic | 45.0% | |
| ATAGCTCAATGCCTCCTTTC+TGG | + | chr1_2:71968725-71968744 | None:intergenic | 45.0% | |
| !! | AAGGAGGCATTGAGCTATTG+TGG | - | chr1_2:71968727-71968746 | Msa0090110:CDS | 45.0% |
| GTTATTGTGCTAACAGAGGG+GGG | + | chr1_2:71968782-71968801 | None:intergenic | 45.0% | |
| GGTTATTGTGCTAACAGAGG+GGG | + | chr1_2:71968783-71968802 | None:intergenic | 45.0% | |
| CGTGGTTATTGTGCTAACAG+AGG | + | chr1_2:71968786-71968805 | None:intergenic | 45.0% | |
| GTACGTAGAGACATTTAGCG+TGG | + | chr1_2:71968804-71968823 | None:intergenic | 45.0% | |
| ATCCAGAAGTGGTACAAGCT+AGG | - | chr1_2:71969082-71969101 | Msa0090110:CDS | 45.0% | |
| ! | ATCCTAGCTTGTACCACTTC+TGG | + | chr1_2:71969087-71969106 | None:intergenic | 45.0% |
| AAACCCATAGTGGCACAAAG+GGG | - | chr1_2:71969445-71969464 | Msa0090110:intron | 45.0% | |
| ! | AAACCCCTTTGTGCCACTAT+GGG | + | chr1_2:71969451-71969470 | None:intergenic | 45.0% |
| ! | TAAACCCCTTTGTGCCACTA+TGG | + | chr1_2:71969452-71969471 | None:intergenic | 45.0% |
| GCACAAAGGGGTTTAAACTC+CGG | - | chr1_2:71969457-71969476 | Msa0090110:intron | 45.0% | |
| GGTCACTAAACAATGCTACG+AGG | - | chr1_2:71969988-71970007 | Msa0090110:intron | 45.0% | |
| CTAGCTAACTTCGTCTGGTT+TGG | + | chr1_2:71970093-71970112 | None:intergenic | 45.0% | |
| ! | TTTTGTGTGTGAGTGTGTGG+GGG | - | chr1_2:71970234-71970253 | Msa0090110:intron | 45.0% |
| GAAAGAGAGAGATTCGAGAG+AGG | - | chr1_2:71970275-71970294 | Msa0090110:intron | 45.0% | |
| CTCTGTCGGTACAATCATGT+AGG | - | chr1_2:71970479-71970498 | Msa0090110:intron | 45.0% | |
| CTTGAAGACACTGATCTACC+CGG | - | chr1_2:71970695-71970714 | Msa0090110:intron | 45.0% | |
| ! | GTCATATTTTGTCATCCCCG+TGG | - | chr1_2:71970906-71970925 | Msa0090110:CDS | 45.0% |
| GCAGGAAAAAGAAAAACGGC+GGG | - | chr1_2:71971272-71971291 | Msa0090110:intron | 45.0% | |
| GAAAAAGAAAAACGGCGGGA+AGG | - | chr1_2:71971276-71971295 | Msa0090110:intron | 45.0% | |
| TGGAAAAGATGAGTGTGGGA+AGG | - | chr1_2:71971300-71971319 | Msa0090110:intron | 45.0% | |
| CTGTAAATCTCAGGCTCTTG+GGG | - | chr1_2:71971354-71971373 | Msa0090110:intron | 45.0% | |
| TGTAAATCTCAGGCTCTTGG+GGG | - | chr1_2:71971355-71971374 | Msa0090110:intron | 45.0% | |
| !! | GGGTTTAATTTGGTGCAGAG+AGG | - | chr1_2:71971661-71971680 | Msa0090110:intron | 45.0% |
| ACATACCCTACAAGGTGAGA+GGG | + | chr1_2:71971759-71971778 | None:intergenic | 45.0% | |
| TACATACCCTACAAGGTGAG+AGG | + | chr1_2:71971760-71971779 | None:intergenic | 45.0% | |
| ! | TGAGATGAGTGGGAGTGTAT+GGG | + | chr1_2:71971900-71971919 | None:intergenic | 45.0% |
| TAAACCGCTGTGAGATGAGT+GGG | + | chr1_2:71971910-71971929 | None:intergenic | 45.0% | |
| TTAAACCGCTGTGAGATGAG+TGG | + | chr1_2:71971911-71971930 | None:intergenic | 45.0% | |
| !! | TAGCTTGCTGTTGGTATTGG+TGG | + | chr1_2:71972158-71972177 | None:intergenic | 45.0% |
| !! | GCTGGAATATAGCTTGCTGT+TGG | + | chr1_2:71972167-71972186 | None:intergenic | 45.0% |
| AGATATGGTTGAGATGGCTG+TGG | + | chr1_2:71972278-71972297 | None:intergenic | 45.0% | |
| TGTTGTGATATTGCTGGTGG+TGG | + | chr1_2:71972397-71972416 | None:intergenic | 45.0% | |
| ATGAACTATGTTGCAGGTGC+AGG | - | chr1_2:71972416-71972435 | Msa0090110:intron | 45.0% | |
| GAGTCGAGTTACACTTGCAT+AGG | - | chr1_2:71972446-71972465 | Msa0090110:intron | 45.0% | |
| TTACACTTGCATAGGTGCAC+CGG | - | chr1_2:71972454-71972473 | Msa0090110:intron | 45.0% | |
| AAGGGACATTGAATTGGGGA+AGG | - | chr1_2:71972534-71972553 | Msa0090110:intron | 45.0% | |
| AATTGGGGAAGGAGCTATTC+AGG | - | chr1_2:71972545-71972564 | Msa0090110:intron | 45.0% | |
| !! | TATTATTAATAATTAACATA+AGG | - | chr1_2:71969121-71969140 | Msa0090110:intron | 5.0% |
| !! | ATTATTAATAATTAACATAA+GGG | - | chr1_2:71969122-71969141 | Msa0090110:intron | 5.0% |
| TGAAGCAAGTCTAAGTCCCC+TGG | - | chr1_2:71968685-71968704 | Msa0090110:CDS | 50.0% | |
| GAAGCAAGTCTAAGTCCCCT+GGG | - | chr1_2:71968686-71968705 | Msa0090110:CDS | 50.0% | |
| GGGGGACATGTTTGAGAAAC+AGG | + | chr1_2:71968764-71968783 | None:intergenic | 50.0% | |
| CCTAGCTAGCTAACTTCGTC+TGG | + | chr1_2:71970098-71970117 | None:intergenic | 50.0% | |
| CCAGACGAAGTTAGCTAGCT+AGG | - | chr1_2:71970095-71970114 | Msa0090110:intron | 50.0% | |
| AGAGAGAGATTCGAGAGAGG+AGG | - | chr1_2:71970278-71970297 | Msa0090110:intron | 50.0% | |
| !! | TCCATTTTCAGGAGACCGCA+AGG | - | chr1_2:71970611-71970630 | Msa0090110:CDS | 50.0% |
| TCCTTGCGGTCTCCTGAAAA+TGG | + | chr1_2:71970615-71970634 | None:intergenic | 50.0% | |
| CGGGTAGATCAGTGTCTTCA+AGG | + | chr1_2:71970697-71970716 | None:intergenic | 50.0% | |
| AAGAAAAACGGCGGGAAGGA+TGG | - | chr1_2:71971280-71971299 | Msa0090110:intron | 50.0% | |
| ! | GTGAGATGAGTGGGAGTGTA+TGG | + | chr1_2:71971901-71971920 | None:intergenic | 50.0% |
| !! | CTTGCTGTTGGTATTGGTGG+TGG | + | chr1_2:71972155-71972174 | None:intergenic | 50.0% |
| TATGGTTGAGATGGCTGTGG+TGG | + | chr1_2:71972275-71972294 | None:intergenic | 50.0% | |
| AACTATGTTGCAGGTGCAGG+TGG | - | chr1_2:71972419-71972438 | Msa0090110:intron | 50.0% | |
| !! | ATAGGTGCACCGGTTAGACA+AGG | - | chr1_2:71972464-71972483 | Msa0090110:intron | 50.0% |
| GAGAGATTCGAGAGAGGAGG+TGG | - | chr1_2:71970281-71970300 | Msa0090110:intron | 55.0% | |
| !! | ATAGCTAGCCTTGGCGGTGA+CGG | + | chr1_2:71971390-71971409 | None:intergenic | 55.0% |
| ! | GGAAGACTAGCTGACGTGCA+TGG | + | chr1_2:71971704-71971723 | None:intergenic | 55.0% |
| CAGCTCCCTCTCACCTTGTA+GGG | - | chr1_2:71971751-71971770 | Msa0090110:intron | 55.0% | |
| CACTCCCACTCATCTCACAG+CGG | - | chr1_2:71971903-71971922 | Msa0090110:intron | 55.0% | |
| !! | TGGTGGTGGTGGTGGAATGT+GGG | + | chr1_2:71972255-71972274 | None:intergenic | 55.0% |
| TATGTTGCAGGTGCAGGTGG+TGG | - | chr1_2:71972422-71972441 | Msa0090110:intron | 55.0% | |
| ! | TCCAGGAAGTAGTGGTGGGA+AGG | - | chr1_2:71972493-71972512 | Msa0090110:intron | 55.0% |
| TCCTTCCCACCACTACTTCC+TGG | + | chr1_2:71972497-71972516 | None:intergenic | 55.0% | |
| TGGGGAAGGAGCTATTCAGG+AGG | - | chr1_2:71972548-71972567 | Msa0090110:intron | 55.0% | |
| GGAAGGAGCTATTCAGGAGG+AGG | - | chr1_2:71972551-71972570 | Msa0090110:intron | 55.0% | |
| AGGAGCTATTCAGGAGGAGG+AGG | - | chr1_2:71972554-71972573 | Msa0090110:intron | 55.0% | |
| AGCTATTCAGGAGGAGGAGG+AGG | - | chr1_2:71972557-71972576 | Msa0090110:intron | 55.0% | |
| TATTCAGGAGGAGGAGGAGG+AGG | - | chr1_2:71972560-71972579 | Msa0090110:intron | 55.0% | |
| TTCGAGAGAGGAGGTGGCAG+AGG | - | chr1_2:71970287-71970306 | Msa0090110:intron | 60.0% | |
| CACATGAACCGTCACCGCCA+AGG | - | chr1_2:71971379-71971398 | Msa0090110:intron | 60.0% | |
| AGGGAGCTGGTTGTGGTGCA+AGG | + | chr1_2:71971740-71971759 | None:intergenic | 60.0% | |
| AGGTGAGAGGGAGCTGGTTG+TGG | + | chr1_2:71971747-71971766 | None:intergenic | 60.0% | |
| CCTACAAGGTGAGAGGGAGC+TGG | + | chr1_2:71971753-71971772 | None:intergenic | 60.0% | |
| CCAGCTCCCTCTCACCTTGT+AGG | - | chr1_2:71971750-71971769 | Msa0090110:intron | 60.0% | |
| !! | GTGGTGGTGGTGGTGGAATG+TGG | + | chr1_2:71972256-71972275 | None:intergenic | 60.0% |
| !! | TGAGATGGCTGTGGTGGTGG+TGG | + | chr1_2:71972269-71972288 | None:intergenic | 60.0% |
| GGTTGAGATGGCTGTGGTGG+TGG | + | chr1_2:71972272-71972291 | None:intergenic | 60.0% | |
| GGGAAAGACACTGGGCGTGT+AGG | + | chr1_2:71972311-71972330 | None:intergenic | 60.0% | |
| !! | GATGGCTGTGGTGGTGGTGG+TGG | + | chr1_2:71972266-71972285 | None:intergenic | 65.0% |
| TCAGGAGGAGGAGGAGGAGG+AGG | - | chr1_2:71972563-71972582 | Msa0090110:intron | 65.0% | |
| !! | GGCTGTGGTGGTGGTGGTGG+TGG | + | chr1_2:71972263-71972282 | None:intergenic | 70.0% |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr1_2:71972566-71972585 | Msa0090110:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr1_2:71972566-71972585 | Msa0090110:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 71968609 | 71972664 | 71968609 | ID=Msa0090110;Name=Msa0090110 |
| chr1_2 | mRNA | 71968609 | 71972664 | 71968609 | ID=Msa0090110-mRNA-1;Parent=Msa0090110;Name=Msa0090110-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.2|0|0.83|0.6|0.5|6|0|357 |
| chr1_2 | exon | 71972658 | 71972664 | 71972658 | ID=Msa0090110-mRNA-1:exon:24929;Parent=Msa0090110-mRNA-1 |
| chr1_2 | exon | 71970777 | 71971014 | 71970777 | ID=Msa0090110-mRNA-1:exon:24928;Parent=Msa0090110-mRNA-1 |
| chr1_2 | exon | 71970557 | 71970651 | 71970557 | ID=Msa0090110-mRNA-1:exon:24927;Parent=Msa0090110-mRNA-1 |
| chr1_2 | exon | 71969885 | 71970004 | 71969885 | ID=Msa0090110-mRNA-1:exon:24926;Parent=Msa0090110-mRNA-1 |
| chr1_2 | exon | 71969501 | 71969594 | 71969501 | ID=Msa0090110-mRNA-1:exon:24925;Parent=Msa0090110-mRNA-1 |
| chr1_2 | exon | 71968609 | 71969128 | 71968609 | ID=Msa0090110-mRNA-1:exon:24924;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71972658 | 71972664 | 71972658 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71970777 | 71971014 | 71970777 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71970557 | 71970651 | 71970557 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71969885 | 71970004 | 71969885 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71969501 | 71969594 | 71969501 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| chr1_2 | CDS | 71968609 | 71969128 | 71968609 | ID=Msa0090110-mRNA-1:cds;Parent=Msa0090110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
