Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091710 | XP_013468353.1 | 91.023 | 479 | 41 | 1 | 1 | 477 | 1 | 479 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091710 | sp|F4KCE9|KNL2_ARATH | 42.857 | 133 | 70 | 4 | 18 | 146 | 11 | 141 | 1.84e-27 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091710 | A0A072VWG5 | 91.023 | 479 | 41 | 1 | 1 | 477 | 1 | 479 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0091710 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026800 | Msa0091710 | 0.811678 | 6.209062e-51 | -8.615850e-47 |
| Msa0090400 | Msa0091710 | 0.804474 | 2.122936e-49 | -8.615850e-47 |
| Msa0091710 | Msa0122040 | 0.811794 | 5.858202e-51 | -8.615850e-47 |
| Msa0091710 | Msa0122510 | 0.813802 | 2.128984e-51 | -8.615850e-47 |
| Msa0091710 | Msa0520890 | 0.833819 | 4.282946e-56 | -8.615850e-47 |
| Msa0091710 | Msa0765840 | 0.806556 | 7.767692e-50 | -8.615850e-47 |
| Msa0091710 | Msa0845440 | 0.807378 | 5.205837e-50 | -8.615850e-47 |
| Msa0091710 | Msa0945110 | 0.800966 | 1.124557e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091710 | MtrunA17_Chr1g0182611 | 91.023 | 479 | 41 | 1 | 1 | 477 | 1 | 479 | 0.0 | 885 |
| Msa0091710 | MtrunA17_Chr1g0182621 | 68.195 | 349 | 99 | 3 | 129 | 477 | 246 | 582 | 3.62e-148 | 436 |
| Msa0091710 | MtrunA17_Chr1g0182621 | 58.537 | 328 | 120 | 4 | 22 | 344 | 26 | 342 | 7.65e-120 | 363 |
| Msa0091710 | MtrunA17_Chr7g0231611 | 35.714 | 140 | 80 | 5 | 1 | 137 | 1 | 133 | 3.06e-18 | 85.9 |
| Msa0091710 | MtrunA17_Chr5g0416851 | 35.714 | 140 | 80 | 5 | 1 | 137 | 1 | 133 | 4.27e-18 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091710 | AT5G02520.1 | 42.857 | 133 | 70 | 4 | 18 | 146 | 11 | 141 | 1.87e-28 | 119 |
| Msa0091710 | AT5G02520.1 | 54.167 | 48 | 22 | 0 | 430 | 477 | 527 | 574 | 3.50e-11 | 65.9 |
| Msa0091710 | AT5G02520.3 | 42.857 | 133 | 70 | 4 | 18 | 146 | 11 | 141 | 2.46e-28 | 118 |
| Msa0091710 | AT5G02520.2 | 43.284 | 134 | 69 | 5 | 18 | 146 | 11 | 142 | 1.22e-27 | 116 |
| Msa0091710 | AT5G02520.2 | 54.167 | 48 | 22 | 0 | 430 | 477 | 528 | 575 | 3.30e-11 | 65.9 |
| Msa0091710 | AT1G58210.1 | 39.823 | 113 | 64 | 2 | 3 | 115 | 45 | 153 | 8.33e-17 | 81.3 |
Find 142 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCATCAGATGATATTTC+TGG | 0.152483 | 1_2:-73882815 | None:intergenic |
| TTCTACCTCGCTTAGAGTTT+TGG | 0.216024 | 1_2:+73883730 | Msa0091710:CDS |
| CTCTGTTTCTCCAGAGTCAT+TGG | 0.218790 | 1_2:+73883474 | Msa0091710:CDS |
| TGCAAGGGAGATAATTAATT+AGG | 0.247826 | 1_2:+73884256 | Msa0091710:three_prime_UTR |
| CGGTAACAGGCTGTTTCTTC+TGG | 0.258466 | 1_2:-73883120 | None:intergenic |
| GATTAACAGGGCAGAGATTT+AGG | 0.261531 | 1_2:+73884311 | Msa0091710:three_prime_UTR |
| ACAAATGGTATATGATTAAC+AGG | 0.290151 | 1_2:+73884298 | Msa0091710:three_prime_UTR |
| TCAAACACCTATTTATAATA+TGG | 0.307116 | 1_2:+73883758 | Msa0091710:CDS |
| GAGGTTGTTATAAGAGAAAA+AGG | 0.309998 | 1_2:+73883329 | Msa0091710:CDS |
| TGTCAAGAAATCTTGTTTGA+TGG | 0.311615 | 1_2:+73882376 | Msa0091710:CDS |
| CGGAAGCAGCAGCCTGCATC+TGG | 0.314800 | 1_2:+73882689 | Msa0091710:CDS |
| TAGAGGCTCTTCACCATCAT+TGG | 0.318246 | 1_2:+73884008 | Msa0091710:three_prime_UTR |
| GAGCACCGCACGCTGGAAAA+TGG | 0.319034 | 1_2:+73882073 | Msa0091710:CDS |
| TCACATACCATATTATAAAT+AGG | 0.323614 | 1_2:-73883765 | None:intergenic |
| TCTTTATCTGGATGTGTTGC+CGG | 0.325220 | 1_2:-73883148 | None:intergenic |
| CCGCGAGATTATAGAAATTC+AGG | 0.330860 | 1_2:+73883960 | Msa0091710:CDS |
| AGAGCATAGCTTTCCCAGTT+TGG | 0.337878 | 1_2:-73882280 | None:intergenic |
| TGATTCGGCCAATGCTGTTC+CGG | 0.339045 | 1_2:+73882336 | Msa0091710:CDS |
| GGAATAGTAAACACATTGTC+TGG | 0.341105 | 1_2:+73883250 | Msa0091710:CDS |
| GTGGAGATCTGGTCTTTATC+TGG | 0.363337 | 1_2:-73883160 | None:intergenic |
| TCATATACCATTTGTATGTT+CGG | 0.364214 | 1_2:-73884290 | None:intergenic |
| AGTGGGGTTGATGTTACTTA+TGG | 0.365193 | 1_2:+73882614 | Msa0091710:CDS |
| GATGGTGAAGAGCCTCTAAA+AGG | 0.383621 | 1_2:-73884003 | None:intergenic |
| CAGAAGAAACAGCCTGTTAC+CGG | 0.388877 | 1_2:+73883121 | Msa0091710:CDS |
| AGAGGCTCTTCACCATCATT+GGG | 0.392278 | 1_2:+73884009 | Msa0091710:three_prime_UTR |
| AGAGTTTAACATTATGCAAC+CGG | 0.398439 | 1_2:-73883096 | None:intergenic |
| AACCCCACTCATCTCCTTTG+AGG | 0.416310 | 1_2:-73882600 | None:intergenic |
| GAGGATTCTCTTCCACTGTA+TGG | 0.421691 | 1_2:+73884454 | Msa0091710:three_prime_UTR |
| GGTGTTGCCTGACGAGGCCC+TGG | 0.428575 | 1_2:+73882538 | Msa0091710:CDS |
| GCAAGGGAGATAATTAATTA+GGG | 0.429282 | 1_2:+73884257 | Msa0091710:three_prime_UTR |
| GGGCAGAGATTTAGGCATAA+TGG | 0.434677 | 1_2:+73884319 | Msa0091710:three_prime_UTR |
| TCTGTTTCTCCAGAGTCATT+GGG | 0.438436 | 1_2:+73883475 | Msa0091710:CDS |
| CAATCTCCCGTGGTCTTATC+CGG | 0.440181 | 1_2:-73882980 | None:intergenic |
| GGCATTCCTCGAAGATGAAC+GGG | 0.446700 | 1_2:+73883009 | Msa0091710:CDS |
| GGAAAATGCAAGAAACCATT+CGG | 0.448683 | 1_2:+73882560 | Msa0091710:CDS |
| TCTAGGTTACTTTATACGAT+TGG | 0.451256 | 1_2:+73880932 | Msa0091710:intron |
| TCCTACTTATTTGGTATCAC+CGG | 0.453694 | 1_2:+73882961 | Msa0091710:CDS |
| TTCTTCTAGTTTCCGACGAA+CGG | 0.453700 | 1_2:+73880827 | Msa0091710:CDS |
| GACACCCATTCAGTCACAAA+AGG | 0.454994 | 1_2:+73883228 | Msa0091710:CDS |
| GTTGCCGGATCTCCGGTAAC+AGG | 0.455494 | 1_2:-73883133 | None:intergenic |
| ACATGTCCCGTTCATCTTCG+AGG | 0.466823 | 1_2:-73883015 | None:intergenic |
| TGTATGGAGCTGAGCTCCCT+TGG | 0.471768 | 1_2:+73884470 | Msa0091710:three_prime_UTR |
| AGGCTGGTAAGGTGGAGATC+TGG | 0.472582 | 1_2:-73883171 | None:intergenic |
| GGAGATGTGAGTAGGTAGCT+AGG | 0.475346 | 1_2:+73884340 | Msa0091710:three_prime_UTR |
| GATCTCCACCTTACCAGCCT+TGG | 0.478185 | 1_2:+73883174 | Msa0091710:CDS |
| ACAGCCTGTTACCGGAGATC+CGG | 0.478659 | 1_2:+73883129 | Msa0091710:CDS |
| GACCACGGGAGATTGCAATA+AGG | 0.479142 | 1_2:+73882988 | Msa0091710:CDS |
| GTCAATGTTGTTCATGGTGG+TGG | 0.480142 | 1_2:+73883055 | Msa0091710:CDS |
| TGGATGTGTTGCCGGATCTC+CGG | 0.481700 | 1_2:-73883140 | None:intergenic |
| AGGTTACTTTATACGATTGG+TGG | 0.484584 | 1_2:+73880935 | Msa0091710:intron |
| GGTGAGGTCAATGTTGTTCA+TGG | 0.486238 | 1_2:+73883049 | Msa0091710:CDS |
| ATCTGAAGCTGATATTGATT+CGG | 0.486466 | 1_2:+73882321 | Msa0091710:CDS |
| AATATATACCAGCCCAATGA+TGG | 0.497740 | 1_2:-73884021 | None:intergenic |
| GCTCTAGAATGCACCGGAGA+AGG | 0.500619 | 1_2:+73882298 | Msa0091710:CDS |
| AAATTTCATTCCTACTTCGT+TGG | 0.500725 | 1_2:+73882517 | Msa0091710:CDS |
| GAACAAAACACAAGATAGAA+AGG | 0.502201 | 1_2:-73884422 | None:intergenic |
| GGAAACCGTTTAGCCATCTC+TGG | 0.503556 | 1_2:+73880976 | Msa0091710:CDS |
| AAGTGCAACATCACTCTCAA+TGG | 0.503646 | 1_2:+73880755 | None:intergenic |
| AGAAGTGGAAACTCGTGATT+CGG | 0.511753 | 1_2:+73882757 | Msa0091710:CDS |
| GAAAATGCAAGAAACCATTC+GGG | 0.520042 | 1_2:+73882561 | Msa0091710:CDS |
| CTGTAAAATCTCCACAAGGA+AGG | 0.520970 | 1_2:+73883410 | Msa0091710:CDS |
| TTGGAAGAAATGGTTGCAGT+TGG | 0.521784 | 1_2:-73880792 | None:intergenic |
| TGGTATATATGTTATCACTA+GGG | 0.526872 | 1_2:+73882039 | Msa0091710:CDS |
| TACACTATCCGGAACAGCAT+TGG | 0.528438 | 1_2:-73882344 | None:intergenic |
| ATTACAACCGAACATACAAA+TGG | 0.528654 | 1_2:+73884283 | Msa0091710:three_prime_UTR |
| CTACGATGACCTCCAGATGC+AGG | 0.528905 | 1_2:-73882701 | None:intergenic |
| ACACCCATTCAGTCACAAAA+GGG | 0.532185 | 1_2:+73883229 | Msa0091710:CDS |
| GTTGATGTTACTTATGGTAG+TGG | 0.532246 | 1_2:+73882620 | Msa0091710:CDS |
| TGTAAAATCTCCACAAGGAA+GGG | 0.537405 | 1_2:+73883411 | Msa0091710:CDS |
| AAAAGAATGCAAAGCCTCAA+AGG | 0.537827 | 1_2:+73882586 | Msa0091710:CDS |
| ATGTTGTTCATGGTGGTGGC+AGG | 0.538005 | 1_2:+73883059 | Msa0091710:CDS |
| CAAATTGCAGATACACTATC+CGG | 0.539970 | 1_2:-73882355 | None:intergenic |
| AGATGCCAGAGATGGCTAAA+CGG | 0.541078 | 1_2:-73880981 | None:intergenic |
| AACATTAATAGCACGTAACC+TGG | 0.544388 | 1_2:-73882660 | None:intergenic |
| ATATACCATCGGCAGTCTCA+AGG | 0.545294 | 1_2:-73882024 | None:intergenic |
| GAGCTCTACCTCAACAGAAG+TGG | 0.545818 | 1_2:+73882742 | Msa0091710:CDS |
| AGTAAACACATTGTCTGGGC+AGG | 0.549663 | 1_2:+73883255 | Msa0091710:CDS |
| TTCGTTGGTGTTGCCTGACG+AGG | 0.551013 | 1_2:+73882532 | Msa0091710:CDS |
| GCTCTTCACCATCATTGGGC+TGG | 0.552717 | 1_2:+73884013 | Msa0091710:three_prime_UTR |
| ATCAGCTTCAGATCCTTCTC+CGG | 0.554639 | 1_2:-73882311 | None:intergenic |
| ATGGTATATATGTTATCACT+AGG | 0.556691 | 1_2:+73882038 | Msa0091710:CDS |
| ACTGCAACCATTTCTTCCAA+TGG | 0.556744 | 1_2:+73880795 | Msa0091710:CDS |
| GCGAAAATAGACATGGTACC+AGG | 0.560344 | 1_2:+73882642 | Msa0091710:CDS |
| AAGCCTCAAAGGAGATGAGT+GGG | 0.564158 | 1_2:+73882597 | Msa0091710:CDS |
| GAAGAAATGGTTGCAGTTGG+AGG | 0.564507 | 1_2:-73880789 | None:intergenic |
| GCAGGAATAGACGTAGTGCC+CGG | 0.564937 | 1_2:+73883077 | Msa0091710:CDS |
| ACTGAAGTCTGAAGTGTGCA+AGG | 0.565051 | 1_2:+73884240 | Msa0091710:three_prime_UTR |
| TCGTCGGAAACTAGAAGAAG+TGG | 0.565214 | 1_2:-73880823 | None:intergenic |
| GCATAGCTTTCCCAGTTTGG+AGG | 0.565501 | 1_2:-73882277 | None:intergenic |
| TCCGGTGATACCAAATAAGT+AGG | 0.566020 | 1_2:-73882962 | None:intergenic |
| AAGCAGCAGCCTGCATCTGG+AGG | 0.566088 | 1_2:+73882692 | Msa0091710:CDS |
| TCAGGCAACACCAACGAAGT+AGG | 0.568738 | 1_2:-73882527 | None:intergenic |
| GGCATAATGGAGATGTGAGT+AGG | 0.571720 | 1_2:+73884332 | Msa0091710:three_prime_UTR |
| GGAAAAGAGTGATGGAGGAC+TGG | 0.572017 | 1_2:+73883195 | Msa0091710:CDS |
| AGGCATTCCTCGAAGATGAA+CGG | 0.572872 | 1_2:+73883008 | Msa0091710:CDS |
| AATGGTTGCAGTTGGAGGTG+TGG | 0.575164 | 1_2:-73880784 | None:intergenic |
| GGATACAAGTCACTCGAACA+AGG | 0.576987 | 1_2:+73883432 | Msa0091710:CDS |
| ACGAGTTTCCACTTCTGTTG+AGG | 0.577453 | 1_2:-73882750 | None:intergenic |
| GGTATATATGTTATCACTAG+GGG | 0.588021 | 1_2:+73882040 | Msa0091710:CDS |
| CATCCAGAAATATCATCTGA+TGG | 0.590199 | 1_2:+73882812 | Msa0091710:CDS |
| AGCTATGCTCTAGAATGCAC+CGG | 0.591217 | 1_2:+73882292 | Msa0091710:CDS |
| ACGGGACATGTCAATTAAGA+CGG | 0.591957 | 1_2:+73883027 | Msa0091710:CDS |
| CGGGACATGTCAATTAAGAC+GGG | 0.595490 | 1_2:+73883028 | Msa0091710:CDS |
| CGTCGGAAACTAGAAGAAGT+GGG | 0.595818 | 1_2:-73880822 | None:intergenic |
| TGACTTGTATCCCTTCCTTG+TGG | 0.599408 | 1_2:-73883421 | None:intergenic |
| AGTGTAATTTATCTAACCAA+GGG | 0.599817 | 1_2:-73884486 | None:intergenic |
| TCTGGATGAGATGCCAGAGA+TGG | 0.599841 | 1_2:-73880989 | None:intergenic |
| CCTGAATTTCTATAATCTCG+CGG | 0.600251 | 1_2:-73883960 | None:intergenic |
| TGCCTTATTGCAATCTCCCG+TGG | 0.601695 | 1_2:-73882990 | None:intergenic |
| GTGAGTAAACAACCGTTCGT+CGG | 0.603870 | 1_2:-73880839 | None:intergenic |
| CATGAACGAGCACCGCACGC+TGG | 0.604496 | 1_2:+73882066 | Msa0091710:CDS |
| TATACCATCGGCAGTCTCAA+GGG | 0.605137 | 1_2:-73882023 | None:intergenic |
| GAATAGTAAACACATTGTCT+GGG | 0.607705 | 1_2:+73883251 | Msa0091710:CDS |
| CCAGCCTTGGAAAAGAGTGA+TGG | 0.608271 | 1_2:+73883187 | Msa0091710:CDS |
| GATACAAGTCACTCGAACAA+GGG | 0.609110 | 1_2:+73883433 | Msa0091710:CDS |
| GGGAGCTCAGCTCCATACAG+TGG | 0.612646 | 1_2:-73884466 | None:intergenic |
| GAGTGTAATTTATCTAACCA+AGG | 0.612988 | 1_2:-73884487 | None:intergenic |
| ACAGTTGAAACAGAAGCAGT+TGG | 0.619629 | 1_2:+73883355 | Msa0091710:CDS |
| CTGCATCTGGAGGTCATCGT+AGG | 0.620919 | 1_2:+73882702 | Msa0091710:CDS |
| GCCTTGGAAAAGAGTGATGG+AGG | 0.621071 | 1_2:+73883190 | Msa0091710:CDS |
| AGTGATAACATATATACCAT+CGG | 0.622033 | 1_2:-73882035 | None:intergenic |
| GTATCACCGGATAAGACCAC+GGG | 0.626364 | 1_2:+73882974 | Msa0091710:CDS |
| TGAACAGCAAGGATCTGCAA+TGG | 0.630789 | 1_2:-73884388 | None:intergenic |
| GTGTTGCCTGACGAGGCCCT+GGG | 0.635492 | 1_2:+73882539 | Msa0091710:CDS |
| TGGCTCGTTAAATCATCTCA+AGG | 0.637214 | 1_2:+73880955 | Msa0091710:CDS |
| CATGTCAATTAAGACGGGTG+AGG | 0.637260 | 1_2:+73883033 | Msa0091710:CDS |
| GAGTTTAACATTATGCAACC+GGG | 0.641017 | 1_2:-73883095 | None:intergenic |
| GTCGGAAACTAGAAGAAGTG+GGG | 0.641310 | 1_2:-73880821 | None:intergenic |
| CTGAAGTCTGAAGTGTGCAA+GGG | 0.642669 | 1_2:+73884241 | Msa0091710:three_prime_UTR |
| GAGGTCAATGTTGTTCATGG+TGG | 0.644354 | 1_2:+73883052 | Msa0091710:CDS |
| AAAGCCTCAAAGGAGATGAG+TGG | 0.652543 | 1_2:+73882596 | Msa0091710:CDS |
| AAAAGAGAGACTGAACAGCA+AGG | 0.661526 | 1_2:-73884399 | None:intergenic |
| CAATGACTCTGGAGAAACAG+AGG | 0.661940 | 1_2:-73883473 | None:intergenic |
| GTGCTATTAATGTTTGTCAG+CGG | 0.670687 | 1_2:+73882669 | Msa0091710:CDS |
| GGTATCACCGGATAAGACCA+CGG | 0.680385 | 1_2:+73882973 | Msa0091710:CDS |
| GAGATTATAGAAATTCAGGA+AGG | 0.686775 | 1_2:+73883964 | Msa0091710:CDS |
| TCGGAAACTAGAAGAAGTGG+GGG | 0.688243 | 1_2:-73880820 | None:intergenic |
| TCTTCTGTAAAATCTCCACA+AGG | 0.702540 | 1_2:+73883406 | Msa0091710:CDS |
| GGTAGTGGCGAAAATAGACA+TGG | 0.702887 | 1_2:+73882635 | Msa0091710:CDS |
| TTGCGCCAAAACTCTAAGCG+AGG | 0.703796 | 1_2:-73883735 | None:intergenic |
| AGCCTCAAAGGAGATGAGTG+GGG | 0.721063 | 1_2:+73882598 | Msa0091710:CDS |
| CAAATGGTATATGATTAACA+GGG | 0.740844 | 1_2:+73884299 | Msa0091710:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAATATTTGTAGA+AGG | - | chr1_2:73881464-73881483 | None:intergenic | 10.0% |
| !!! | ATTTCAAAGAATTTTTTATA+TGG | + | chr1_2:73882250-73882269 | Msa0091710:CDS | 10.0% |
| !!! | TAAAATTATCATTTTTGAGT+CGG | + | chr1_2:73881243-73881262 | Msa0091710:intron | 15.0% |
| !! | AATAAATCCTAGATATAAAA+TGG | - | chr1_2:73883850-73883869 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTTTCCTTTCT+AGG | + | chr1_2:73880915-73880934 | Msa0091710:intron | 20.0% |
| !!! | TTTTAAGTTAGATGAAAACT+TGG | + | chr1_2:73881162-73881181 | Msa0091710:intron | 20.0% |
| !! | AAAAAGAAAAATTGTTAAGC+AGG | - | chr1_2:73881360-73881379 | None:intergenic | 20.0% |
| !! | ATACTTTATGTTGTAAATCA+GGG | + | chr1_2:73881943-73881962 | Msa0091710:intron | 20.0% |
| !!! | ACATCATATCTTTTGATAAT+AGG | - | chr1_2:73881998-73882017 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTGCTTACTTTA+TGG | + | chr1_2:73882223-73882242 | Msa0091710:intron | 20.0% |
| !!! | GGTTTAATATTTTTTCTCTT+AGG | - | chr1_2:73883382-73883401 | None:intergenic | 20.0% |
| !! | ATATACAAAAATGCTAACAA+TGG | - | chr1_2:73883644-73883663 | None:intergenic | 20.0% |
| !!! | ATTGTTAGCATTTTTGTATA+TGG | + | chr1_2:73883643-73883662 | Msa0091710:intron | 20.0% |
| !! | TCAAACACCTATTTATAATA+TGG | + | chr1_2:73883758-73883777 | Msa0091710:CDS | 20.0% |
| !! | TCACATACCATATTATAAAT+AGG | - | chr1_2:73883768-73883787 | None:intergenic | 20.0% |
| !! | ATGCATATGATATCTAATAA+TGG | - | chr1_2:73883826-73883845 | None:intergenic | 20.0% |
| !!! | TAGGATTTATTTTCTCTTTA+AGG | + | chr1_2:73883859-73883878 | Msa0091710:intron | 20.0% |
| !!! | ATTTATTTTCTCTTTAAGGT+GGG | + | chr1_2:73883863-73883882 | Msa0091710:intron | 20.0% |
| !!! | ACAATCTATAATCTTTTAAC+TGG | + | chr1_2:73883911-73883930 | Msa0091710:intron | 20.0% |
| ! | TGATAGAGATAAGAATAAGA+AGG | - | chr1_2:73880883-73880902 | None:intergenic | 25.0% |
| !!! | TTTTTTACCATGTTTGACAA+TGG | + | chr1_2:73881377-73881396 | Msa0091710:intron | 25.0% |
| !! | TATTTTACCATTGTCAAACA+TGG | - | chr1_2:73881387-73881406 | None:intergenic | 25.0% |
| ! | ATAAAGCTTCAATATGCAAA+CGG | + | chr1_2:73881404-73881423 | Msa0091710:intron | 25.0% |
| ! | AGGACTAAAATGAATATTAG+AGG | + | chr1_2:73881524-73881543 | Msa0091710:intron | 25.0% |
| ! | GGACTAAAATGAATATTAGA+GGG | + | chr1_2:73881525-73881544 | Msa0091710:intron | 25.0% |
| ! | AAATCTGTTCATATTGAAGT+TGG | - | chr1_2:73881552-73881571 | None:intergenic | 25.0% |
| ! | ACTAGCATTTATACATGAAA+AGG | - | chr1_2:73881832-73881851 | None:intergenic | 25.0% |
| ! | CATACTTTATGTTGTAAATC+AGG | + | chr1_2:73881942-73881961 | Msa0091710:intron | 25.0% |
| !!! | ATATCTTTTGATAATAGGAG+TGG | - | chr1_2:73881993-73882012 | None:intergenic | 25.0% |
| ! | AGTGATAACATATATACCAT+CGG | - | chr1_2:73882038-73882057 | None:intergenic | 25.0% |
| ! | ATGGTATATATGTTATCACT+AGG | + | chr1_2:73882038-73882057 | Msa0091710:CDS | 25.0% |
| ! | TGGTATATATGTTATCACTA+GGG | + | chr1_2:73882039-73882058 | Msa0091710:CDS | 25.0% |
| ! | TCAAACAACGTCATAAAATA+AGG | - | chr1_2:73882182-73882201 | None:intergenic | 25.0% |
| !!! | TTGTTTGATGGTAAGTATTT+TGG | + | chr1_2:73882388-73882407 | Msa0091710:intron | 25.0% |
| ! | AGGTTGTTATAAGAGAAAAA+GGG | + | chr1_2:73883330-73883349 | Msa0091710:CDS | 25.0% |
| ! | AAAGAATAGAGTGAAGTAAA+TGG | - | chr1_2:73883681-73883700 | None:intergenic | 25.0% |
| ! | TTCACTCTATTCTTTATGTT+TGG | + | chr1_2:73883686-73883705 | Msa0091710:intron | 25.0% |
| ! | TCACTCTATTCTTTATGTTT+GGG | + | chr1_2:73883687-73883706 | Msa0091710:intron | 25.0% |
| !!! | TTATGTTTGGGTTATTTTGT+AGG | + | chr1_2:73883699-73883718 | Msa0091710:intron | 25.0% |
| !! | ATGCATACCATTTTATATCT+AGG | + | chr1_2:73883840-73883859 | Msa0091710:intron | 25.0% |
| !!! | GATTTATTTTCTCTTTAAGG+TGG | + | chr1_2:73883862-73883881 | Msa0091710:intron | 25.0% |
| !! | TCTTTTATATCACCTTTTAG+AGG | + | chr1_2:73883991-73884010 | Msa0091710:three_prime_UTR | 25.0% |
| !! | TTTTTATCAGAACTATCATG+TGG | + | chr1_2:73884075-73884094 | Msa0091710:intron | 25.0% |
| ! | TCATATACCATTTGTATGTT+CGG | - | chr1_2:73884293-73884312 | None:intergenic | 25.0% |
| ! | ACAAATGGTATATGATTAAC+AGG | + | chr1_2:73884298-73884317 | Msa0091710:three_prime_UTR | 25.0% |
| ! | CAAATGGTATATGATTAACA+GGG | + | chr1_2:73884299-73884318 | Msa0091710:three_prime_UTR | 25.0% |
| TCGTATAAAGTAACCTAGAA+AGG | - | chr1_2:73880931-73880950 | None:intergenic | 30.0% | |
| ! | TCTAGGTTACTTTATACGAT+TGG | + | chr1_2:73880932-73880951 | Msa0091710:intron | 30.0% |
| TAGCTCATGTCTAAATTGTT+AGG | + | chr1_2:73881067-73881086 | Msa0091710:intron | 30.0% | |
| ! | CAATATGAACAGATTTTGCA+AGG | + | chr1_2:73881556-73881575 | Msa0091710:intron | 30.0% |
| !! | AATTTAGCACCGTTTGATTT+TGG | - | chr1_2:73881603-73881622 | None:intergenic | 30.0% |
| CTCTCAATTACTATCATAAG+AGG | + | chr1_2:73881897-73881916 | Msa0091710:intron | 30.0% | |
| GGTATATATGTTATCACTAG+GGG | + | chr1_2:73882040-73882059 | Msa0091710:CDS | 30.0% | |
| ! | ATCTGAAGCTGATATTGATT+CGG | + | chr1_2:73882321-73882340 | Msa0091710:CDS | 30.0% |
| ! | TGTCAAGAAATCTTGTTTGA+TGG | + | chr1_2:73882376-73882395 | Msa0091710:CDS | 30.0% |
| !! | GTCAAAACATTTCTAAGACA+TGG | - | chr1_2:73882437-73882456 | None:intergenic | 30.0% |
| !!! | TTGGTTTTAATTGTTGTTGC+AGG | + | chr1_2:73882488-73882507 | Msa0091710:intron | 30.0% |
| AAATTTCATTCCTACTTCGT+TGG | + | chr1_2:73882517-73882536 | Msa0091710:CDS | 30.0% | |
| !!! | GTAGAGCTCTGTTTTTTATT+TGG | - | chr1_2:73882731-73882750 | None:intergenic | 30.0% |
| TTACCATCAGATGATATTTC+TGG | - | chr1_2:73882818-73882837 | None:intergenic | 30.0% | |
| ! | GAAGTCTTTTCCTACTTATT+TGG | + | chr1_2:73882952-73882971 | Msa0091710:CDS | 30.0% |
| AGAGTTTAACATTATGCAAC+CGG | - | chr1_2:73883099-73883118 | None:intergenic | 30.0% | |
| GAATAGTAAACACATTGTCT+GGG | + | chr1_2:73883251-73883270 | Msa0091710:CDS | 30.0% | |
| !!! | TGAAAAAGTTTTGGGAATTC+TGG | - | chr1_2:73883299-73883318 | None:intergenic | 30.0% |
| GAGGTTGTTATAAGAGAAAA+AGG | + | chr1_2:73883329-73883348 | Msa0091710:CDS | 30.0% | |
| CTTCATGAATTGACAATGAT+TGG | - | chr1_2:73883530-73883549 | None:intergenic | 30.0% | |
| CAATCATTGTCAATTCATGA+AGG | + | chr1_2:73883528-73883547 | Msa0091710:intron | 30.0% | |
| AAAATGCTAACAATGGCATT+GGG | - | chr1_2:73883637-73883656 | None:intergenic | 30.0% | |
| AAAAATGCTAACAATGGCAT+TGG | - | chr1_2:73883638-73883657 | None:intergenic | 30.0% | |
| GAGATTATAGAAATTCAGGA+AGG | + | chr1_2:73883964-73883983 | Msa0091710:CDS | 30.0% | |
| AAGGTTAGAGAGAATTAGTT+AGG | - | chr1_2:73884144-73884163 | None:intergenic | 30.0% | |
| !!! | TTTTTTACAGACCTGTAACA+AGG | - | chr1_2:73884163-73884182 | None:intergenic | 30.0% |
| TGCAAGGGAGATAATTAATT+AGG | + | chr1_2:73884256-73884275 | Msa0091710:three_prime_UTR | 30.0% | |
| GCAAGGGAGATAATTAATTA+GGG | + | chr1_2:73884257-73884276 | Msa0091710:three_prime_UTR | 30.0% | |
| ATTACAACCGAACATACAAA+TGG | + | chr1_2:73884283-73884302 | Msa0091710:three_prime_UTR | 30.0% | |
| CTAGGTGTATGTAAGAAAAA+TGG | + | chr1_2:73884358-73884377 | Msa0091710:three_prime_UTR | 30.0% | |
| GAACAAAACACAAGATAGAA+AGG | - | chr1_2:73884425-73884444 | None:intergenic | 30.0% | |
| !! | TGTTTTGTTCTTGATTCTAG+AGG | + | chr1_2:73884435-73884454 | Msa0091710:three_prime_UTR | 30.0% |
| ATAAGAAGGATGAGAGTGAA+GGG | - | chr1_2:73880869-73880888 | None:intergenic | 35.0% | |
| AATAAGAAGGATGAGAGTGA+AGG | - | chr1_2:73880870-73880889 | None:intergenic | 35.0% | |
| ! | AGGTTACTTTATACGATTGG+TGG | + | chr1_2:73880935-73880954 | Msa0091710:intron | 35.0% |
| AAGTGAAAACCCTTACTTTC+TGG | - | chr1_2:73881010-73881029 | None:intergenic | 35.0% | |
| GTTAGATGAAAACTTGGCTT+AGG | + | chr1_2:73881168-73881187 | Msa0091710:intron | 35.0% | |
| ACAATGCATTGCAATATGCA+GGG | + | chr1_2:73881289-73881308 | Msa0091710:intron | 35.0% | |
| AAGTGAATAAGTGGAGAATC+CGG | - | chr1_2:73881330-73881349 | None:intergenic | 35.0% | |
| GGCAACTTAAAGTGAATAAG+TGG | - | chr1_2:73881339-73881358 | None:intergenic | 35.0% | |
| GATTTGTGTCTCTCAAAAGA+AGG | + | chr1_2:73881504-73881523 | Msa0091710:intron | 35.0% | |
| ACTAACAGTTAGCAGTTTGT+TGG | + | chr1_2:73881751-73881770 | Msa0091710:intron | 35.0% | |
| CACTTATTACAACAAACCTG+AGG | - | chr1_2:73882106-73882125 | None:intergenic | 35.0% | |
| ATAAGTGTCAATGTCTTTCG+TGG | + | chr1_2:73882119-73882138 | Msa0091710:intron | 35.0% | |
| ! | TATATGGTTTTCCTCCAAAC+TGG | + | chr1_2:73882266-73882285 | Msa0091710:CDS | 35.0% |
| ! | ATATGGTTTTCCTCCAAACT+GGG | + | chr1_2:73882267-73882286 | Msa0091710:CDS | 35.0% |
| CAAATTGCAGATACACTATC+CGG | - | chr1_2:73882358-73882377 | None:intergenic | 35.0% | |
| AGTCTCGATATATAAGTCGT+TGG | + | chr1_2:73882469-73882488 | Msa0091710:intron | 35.0% | |
| ! | TTTAATTGTTGTTGCAGGTG+AGG | + | chr1_2:73882493-73882512 | Msa0091710:intron | 35.0% |
| GGAAAATGCAAGAAACCATT+CGG | + | chr1_2:73882560-73882579 | Msa0091710:CDS | 35.0% | |
| GAAAATGCAAGAAACCATTC+GGG | + | chr1_2:73882561-73882580 | Msa0091710:CDS | 35.0% | |
| AAAAGAATGCAAAGCCTCAA+AGG | + | chr1_2:73882586-73882605 | Msa0091710:CDS | 35.0% | |
| ! | GTTGATGTTACTTATGGTAG+TGG | + | chr1_2:73882620-73882639 | Msa0091710:CDS | 35.0% |
| AACATTAATAGCACGTAACC+TGG | - | chr1_2:73882663-73882682 | None:intergenic | 35.0% | |
| ! | GTGCTATTAATGTTTGTCAG+CGG | + | chr1_2:73882669-73882688 | Msa0091710:CDS | 35.0% |
| CATCCAGAAATATCATCTGA+TGG | + | chr1_2:73882812-73882831 | Msa0091710:CDS | 35.0% | |
| TCCTACTTATTTGGTATCAC+CGG | + | chr1_2:73882961-73882980 | Msa0091710:CDS | 35.0% | |
| GAGTTTAACATTATGCAACC+GGG | - | chr1_2:73883098-73883117 | None:intergenic | 35.0% | |
| ! | ATTCCCTTTTGTGACTGAAT+GGG | - | chr1_2:73883235-73883254 | None:intergenic | 35.0% |
| ! | TATTCCCTTTTGTGACTGAA+TGG | - | chr1_2:73883236-73883255 | None:intergenic | 35.0% |
| GGAATAGTAAACACATTGTC+TGG | + | chr1_2:73883250-73883269 | Msa0091710:CDS | 35.0% | |
| ! | GTCTTCGCTGAAAAAGTTTT+GGG | - | chr1_2:73883307-73883326 | None:intergenic | 35.0% |
| ! | AGTCTTCGCTGAAAAAGTTT+TGG | - | chr1_2:73883308-73883327 | None:intergenic | 35.0% |
| !!! | AAAACTTTTTCAGCGAAGAC+TGG | + | chr1_2:73883307-73883326 | Msa0091710:CDS | 35.0% |
| ! | TGGAGATTTTACAGAAGATG+CGG | - | chr1_2:73883404-73883423 | None:intergenic | 35.0% |
| TCTTCTGTAAAATCTCCACA+AGG | + | chr1_2:73883406-73883425 | Msa0091710:CDS | 35.0% | |
| TGTAAAATCTCCACAAGGAA+GGG | + | chr1_2:73883411-73883430 | Msa0091710:CDS | 35.0% | |
| GGTCTCAAAAAATCAAGATC+TGG | + | chr1_2:73883496-73883515 | Msa0091710:CDS | 35.0% | |
| CATGAATGACAATTCATGAG+AGG | - | chr1_2:73883597-73883616 | None:intergenic | 35.0% | |
| !! | GTTTGGGTTATTTTGTAGGA+AGG | + | chr1_2:73883703-73883722 | Msa0091710:intron | 35.0% |
| GATATCTAATAATGGCAGCT+GGG | - | chr1_2:73883818-73883837 | None:intergenic | 35.0% | |
| TGATATCTAATAATGGCAGC+TGG | - | chr1_2:73883819-73883838 | None:intergenic | 35.0% | |
| AAGGTGGGTAAGATAAACAA+AGG | + | chr1_2:73883878-73883897 | Msa0091710:intron | 35.0% | |
| AGGTGGGTAAGATAAACAAA+GGG | + | chr1_2:73883879-73883898 | Msa0091710:intron | 35.0% | |
| CCTGAATTTCTATAATCTCG+CGG | - | chr1_2:73883963-73883982 | None:intergenic | 35.0% | |
| AATATATACCAGCCCAATGA+TGG | - | chr1_2:73884024-73884043 | None:intergenic | 35.0% | |
| ATTCTCTCTAACCTTGTTAC+AGG | + | chr1_2:73884149-73884168 | Msa0091710:intron | 35.0% | |
| ACAGGTCTGTAAAAAATGAG+CGG | + | chr1_2:73884167-73884186 | Msa0091710:intron | 35.0% | |
| TTGGAAGAAATGGTTGCAGT+TGG | - | chr1_2:73880795-73880814 | None:intergenic | 40.0% | |
| ACTGCAACCATTTCTTCCAA+TGG | + | chr1_2:73880795-73880814 | Msa0091710:CDS | 40.0% | |
| !! | TTCTTCTAGTTTCCGACGAA+CGG | + | chr1_2:73880827-73880846 | Msa0091710:CDS | 40.0% |
| TAAGAAGGATGAGAGTGAAG+GGG | - | chr1_2:73880868-73880887 | None:intergenic | 40.0% | |
| TGGCTCGTTAAATCATCTCA+AGG | + | chr1_2:73880955-73880974 | Msa0091710:CDS | 40.0% | |
| GCATCTCATCCAGAAAGTAA+GGG | + | chr1_2:73880998-73881017 | Msa0091710:intron | 40.0% | |
| GTTAGGTTAGAGTTCCATCT+AGG | + | chr1_2:73881084-73881103 | Msa0091710:intron | 40.0% | |
| TGAGCATAACTCACTTGGTA+GGG | + | chr1_2:73881266-73881285 | Msa0091710:intron | 40.0% | |
| GACAATGCATTGCAATATGC+AGG | + | chr1_2:73881288-73881307 | Msa0091710:intron | 40.0% | |
| CAATGCATTGCAATATGCAG+GGG | + | chr1_2:73881290-73881309 | Msa0091710:intron | 40.0% | |
| AGTGAATAAGTGGAGAATCC+GGG | - | chr1_2:73881329-73881348 | None:intergenic | 40.0% | |
| CAAACTCTTGATATCTGCTG+CGG | - | chr1_2:73881433-73881452 | None:intergenic | 40.0% | |
| CACCAAGTGCCAAAATCAAA+CGG | + | chr1_2:73881591-73881610 | Msa0091710:intron | 40.0% | |
| ! | CAAACGGTGCTAAATTTGCA+AGG | + | chr1_2:73881607-73881626 | Msa0091710:intron | 40.0% |
| TTGTGACACTTCAGCAGAAA+TGG | + | chr1_2:73881726-73881745 | Msa0091710:intron | 40.0% | |
| ! | TAAAACCATTTTCCAGCGTG+CGG | - | chr1_2:73882081-73882100 | None:intergenic | 40.0% |
| !! | GGAAAATGGTTTTACTCCTC+AGG | + | chr1_2:73882087-73882106 | Msa0091710:CDS | 40.0% |
| TGTTTGAGTGCTAACTGTGA+TGG | + | chr1_2:73882195-73882214 | Msa0091710:intron | 40.0% | |
| ! | TGGTTTCTTGCATTTTCCCA+GGG | - | chr1_2:73882558-73882577 | None:intergenic | 40.0% |
| ! | ATGGTTTCTTGCATTTTCCC+AGG | - | chr1_2:73882559-73882578 | None:intergenic | 40.0% |
| ! | TTGCATTCTTTTGTCCCGAA+TGG | - | chr1_2:73882578-73882597 | None:intergenic | 40.0% |
| !! | AGTGGGGTTGATGTTACTTA+TGG | + | chr1_2:73882614-73882633 | Msa0091710:CDS | 40.0% |
| AGAAGTGGAAACTCGTGATT+CGG | + | chr1_2:73882757-73882776 | Msa0091710:CDS | 40.0% | |
| TCCGGTGATACCAAATAAGT+AGG | - | chr1_2:73882965-73882984 | None:intergenic | 40.0% | |
| ACGGGACATGTCAATTAAGA+CGG | + | chr1_2:73883027-73883046 | Msa0091710:CDS | 40.0% | |
| TCTTTATCTGGATGTGTTGC+CGG | - | chr1_2:73883151-73883170 | None:intergenic | 40.0% | |
| ACACCCATTCAGTCACAAAA+GGG | + | chr1_2:73883229-73883248 | Msa0091710:CDS | 40.0% | |
| ACAGTTGAAACAGAAGCAGT+TGG | + | chr1_2:73883355-73883374 | Msa0091710:CDS | 40.0% | |
| ! | GGAGATTTTACAGAAGATGC+GGG | - | chr1_2:73883403-73883422 | None:intergenic | 40.0% |
| CTGTAAAATCTCCACAAGGA+AGG | + | chr1_2:73883410-73883429 | Msa0091710:CDS | 40.0% | |
| GATACAAGTCACTCGAACAA+GGG | + | chr1_2:73883433-73883452 | Msa0091710:CDS | 40.0% | |
| ! | TCTGTTTCTCCAGAGTCATT+GGG | + | chr1_2:73883475-73883494 | Msa0091710:CDS | 40.0% |
| !!! | TTTTTGAGACCCAATGACTC+TGG | - | chr1_2:73883487-73883506 | None:intergenic | 40.0% |
| !! | TGGGTTATTTTGTAGGAAGG+TGG | + | chr1_2:73883706-73883725 | Msa0091710:intron | 40.0% |
| ! | TTCTACCTCGCTTAGAGTTT+TGG | + | chr1_2:73883730-73883749 | Msa0091710:CDS | 40.0% |
| ! | CTTTTTACATTTGACCACCC+AGG | + | chr1_2:73883936-73883955 | Msa0091710:intron | 40.0% |
| CCGCGAGATTATAGAAATTC+AGG | + | chr1_2:73883960-73883979 | Msa0091710:CDS | 40.0% | |
| GATTAACAGGGCAGAGATTT+AGG | + | chr1_2:73884311-73884330 | Msa0091710:three_prime_UTR | 40.0% | |
| AAAAGAGAGACTGAACAGCA+AGG | - | chr1_2:73884402-73884421 | None:intergenic | 40.0% | |
| GAAGAAATGGTTGCAGTTGG+AGG | - | chr1_2:73880792-73880811 | None:intergenic | 45.0% | |
| TCGGAAACTAGAAGAAGTGG+GGG | - | chr1_2:73880823-73880842 | None:intergenic | 45.0% | |
| GTCGGAAACTAGAAGAAGTG+GGG | - | chr1_2:73880824-73880843 | None:intergenic | 45.0% | |
| CGTCGGAAACTAGAAGAAGT+GGG | - | chr1_2:73880825-73880844 | None:intergenic | 45.0% | |
| TCGTCGGAAACTAGAAGAAG+TGG | - | chr1_2:73880826-73880845 | None:intergenic | 45.0% | |
| GTGAGTAAACAACCGTTCGT+CGG | - | chr1_2:73880842-73880861 | None:intergenic | 45.0% | |
| AGATGCCAGAGATGGCTAAA+CGG | - | chr1_2:73880984-73881003 | None:intergenic | 45.0% | |
| GGCATCTCATCCAGAAAGTA+AGG | + | chr1_2:73880997-73881016 | Msa0091710:intron | 45.0% | |
| GTGAGCATAACTCACTTGGT+AGG | + | chr1_2:73881265-73881284 | Msa0091710:intron | 45.0% | |
| GTGAATAAGTGGAGAATCCG+GGG | - | chr1_2:73881328-73881347 | None:intergenic | 45.0% | |
| !! | CACCGTTTGATTTTGGCACT+TGG | - | chr1_2:73881596-73881615 | None:intergenic | 45.0% |
| TGCTGAGTTAGTGGTGACAA+GGG | - | chr1_2:73881706-73881725 | None:intergenic | 45.0% | |
| ATGCTGAGTTAGTGGTGACA+AGG | - | chr1_2:73881707-73881726 | None:intergenic | 45.0% | |
| GTGTCACAATGCTGAGTTAG+TGG | - | chr1_2:73881715-73881734 | None:intergenic | 45.0% | |
| TATACCATCGGCAGTCTCAA+GGG | - | chr1_2:73882026-73882045 | None:intergenic | 45.0% | |
| ATATACCATCGGCAGTCTCA+AGG | - | chr1_2:73882027-73882046 | None:intergenic | 45.0% | |
| GTGTCAATGTCTTTCGTGGT+TGG | + | chr1_2:73882123-73882142 | Msa0091710:intron | 45.0% | |
| AGAGCATAGCTTTCCCAGTT+TGG | - | chr1_2:73882283-73882302 | None:intergenic | 45.0% | |
| !! | AGCTATGCTCTAGAATGCAC+CGG | + | chr1_2:73882292-73882311 | Msa0091710:CDS | 45.0% |
| ATCAGCTTCAGATCCTTCTC+CGG | - | chr1_2:73882314-73882333 | None:intergenic | 45.0% | |
| TACACTATCCGGAACAGCAT+TGG | - | chr1_2:73882347-73882366 | None:intergenic | 45.0% | |
| AAAGCCTCAAAGGAGATGAG+TGG | + | chr1_2:73882596-73882615 | Msa0091710:CDS | 45.0% | |
| AAGCCTCAAAGGAGATGAGT+GGG | + | chr1_2:73882597-73882616 | Msa0091710:CDS | 45.0% | |
| ! | GGTAGTGGCGAAAATAGACA+TGG | + | chr1_2:73882635-73882654 | Msa0091710:CDS | 45.0% |
| GCGAAAATAGACATGGTACC+AGG | + | chr1_2:73882642-73882661 | Msa0091710:CDS | 45.0% | |
| ACGAGTTTCCACTTCTGTTG+AGG | - | chr1_2:73882753-73882772 | None:intergenic | 45.0% | |
| AGGCATTCCTCGAAGATGAA+CGG | + | chr1_2:73883008-73883027 | Msa0091710:CDS | 45.0% | |
| CGGGACATGTCAATTAAGAC+GGG | + | chr1_2:73883028-73883047 | Msa0091710:CDS | 45.0% | |
| CATGTCAATTAAGACGGGTG+AGG | + | chr1_2:73883033-73883052 | Msa0091710:CDS | 45.0% | |
| GGTGAGGTCAATGTTGTTCA+TGG | + | chr1_2:73883049-73883068 | Msa0091710:CDS | 45.0% | |
| GAGGTCAATGTTGTTCATGG+TGG | + | chr1_2:73883052-73883071 | Msa0091710:CDS | 45.0% | |
| GTCAATGTTGTTCATGGTGG+TGG | + | chr1_2:73883055-73883074 | Msa0091710:CDS | 45.0% | |
| CAGAAGAAACAGCCTGTTAC+CGG | + | chr1_2:73883121-73883140 | Msa0091710:CDS | 45.0% | |
| ! | GTGGAGATCTGGTCTTTATC+TGG | - | chr1_2:73883163-73883182 | None:intergenic | 45.0% |
| ! | ACTCTTTTCCAAGGCTGGTA+AGG | - | chr1_2:73883185-73883204 | None:intergenic | 45.0% |
| ! | TCCTCCATCACTCTTTTCCA+AGG | - | chr1_2:73883194-73883213 | None:intergenic | 45.0% |
| GACACCCATTCAGTCACAAA+AGG | + | chr1_2:73883228-73883247 | Msa0091710:CDS | 45.0% | |
| AGTAAACACATTGTCTGGGC+AGG | + | chr1_2:73883255-73883274 | Msa0091710:CDS | 45.0% | |
| !!! | ACTTTTTCAGCGAAGACTGG+AGG | + | chr1_2:73883310-73883329 | Msa0091710:CDS | 45.0% |
| ! | TGACTTGTATCCCTTCCTTG+TGG | - | chr1_2:73883424-73883443 | None:intergenic | 45.0% |
| GGATACAAGTCACTCGAACA+AGG | + | chr1_2:73883432-73883451 | Msa0091710:CDS | 45.0% | |
| ! | CAATGACTCTGGAGAAACAG+AGG | - | chr1_2:73883476-73883495 | None:intergenic | 45.0% |
| ! | CTCTGTTTCTCCAGAGTCAT+TGG | + | chr1_2:73883474-73883493 | Msa0091710:CDS | 45.0% |
| TTCTATAATCTCGCGGTCCT+GGG | - | chr1_2:73883956-73883975 | None:intergenic | 45.0% | |
| TTTCTATAATCTCGCGGTCC+TGG | - | chr1_2:73883957-73883976 | None:intergenic | 45.0% | |
| GATGGTGAAGAGCCTCTAAA+AGG | - | chr1_2:73884006-73884025 | None:intergenic | 45.0% | |
| TAGAGGCTCTTCACCATCAT+TGG | + | chr1_2:73884008-73884027 | Msa0091710:three_prime_UTR | 45.0% | |
| AGAGGCTCTTCACCATCATT+GGG | + | chr1_2:73884009-73884028 | Msa0091710:three_prime_UTR | 45.0% | |
| ! | ACTGAAGTCTGAAGTGTGCA+AGG | + | chr1_2:73884240-73884259 | Msa0091710:three_prime_UTR | 45.0% |
| ! | CTGAAGTCTGAAGTGTGCAA+GGG | + | chr1_2:73884241-73884260 | Msa0091710:three_prime_UTR | 45.0% |
| GGGCAGAGATTTAGGCATAA+TGG | + | chr1_2:73884319-73884338 | Msa0091710:three_prime_UTR | 45.0% | |
| ! | GGCATAATGGAGATGTGAGT+AGG | + | chr1_2:73884332-73884351 | Msa0091710:three_prime_UTR | 45.0% |
| TGAACAGCAAGGATCTGCAA+TGG | - | chr1_2:73884391-73884410 | None:intergenic | 45.0% | |
| GAGGATTCTCTTCCACTGTA+TGG | + | chr1_2:73884454-73884473 | Msa0091710:three_prime_UTR | 45.0% | |
| !! | AAAAATTAAAAATAAATTAC+AGG | + | chr1_2:73881633-73881652 | Msa0091710:intron | 5.0% |
| !! | AAAATTAAAAATAAATTACA+GGG | + | chr1_2:73881634-73881653 | Msa0091710:intron | 5.0% |
| AATGGTTGCAGTTGGAGGTG+TGG | - | chr1_2:73880787-73880806 | None:intergenic | 50.0% | |
| GGAAACCGTTTAGCCATCTC+TGG | + | chr1_2:73880976-73880995 | Msa0091710:CDS | 50.0% | |
| TCTGGATGAGATGCCAGAGA+TGG | - | chr1_2:73880992-73881011 | None:intergenic | 50.0% | |
| ACACACTGTGAGGTCCTAGA+TGG | - | chr1_2:73881101-73881120 | None:intergenic | 50.0% | |
| AAACTCGCACACACACTGTG+AGG | - | chr1_2:73881111-73881130 | None:intergenic | 50.0% | |
| GTCGGTGAGCATAACTCACT+TGG | + | chr1_2:73881261-73881280 | Msa0091710:intron | 50.0% | |
| ! | TTTTCCCTTGAGACTGCCGA+TGG | + | chr1_2:73882019-73882038 | Msa0091710:CDS | 50.0% |
| GCATAGCTTTCCCAGTTTGG+AGG | - | chr1_2:73882280-73882299 | None:intergenic | 50.0% | |
| ! | TGATTCGGCCAATGCTGTTC+CGG | + | chr1_2:73882336-73882355 | Msa0091710:CDS | 50.0% |
| TCAGGCAACACCAACGAAGT+AGG | - | chr1_2:73882530-73882549 | None:intergenic | 50.0% | |
| AGCCTCAAAGGAGATGAGTG+GGG | + | chr1_2:73882598-73882617 | Msa0091710:CDS | 50.0% | |
| AACCCCACTCATCTCCTTTG+AGG | - | chr1_2:73882603-73882622 | None:intergenic | 50.0% | |
| GAGCTCTACCTCAACAGAAG+TGG | + | chr1_2:73882742-73882761 | Msa0091710:CDS | 50.0% | |
| GGTATCACCGGATAAGACCA+CGG | + | chr1_2:73882973-73882992 | Msa0091710:CDS | 50.0% | |
| GTATCACCGGATAAGACCAC+GGG | + | chr1_2:73882974-73882993 | Msa0091710:CDS | 50.0% | |
| !! | CAATCTCCCGTGGTCTTATC+CGG | - | chr1_2:73882983-73883002 | None:intergenic | 50.0% |
| GACCACGGGAGATTGCAATA+AGG | + | chr1_2:73882988-73883007 | Msa0091710:CDS | 50.0% | |
| ! | TGCCTTATTGCAATCTCCCG+TGG | - | chr1_2:73882993-73883012 | None:intergenic | 50.0% |
| GGCATTCCTCGAAGATGAAC+GGG | + | chr1_2:73883009-73883028 | Msa0091710:CDS | 50.0% | |
| ACATGTCCCGTTCATCTTCG+AGG | - | chr1_2:73883018-73883037 | None:intergenic | 50.0% | |
| !! | ATGTTGTTCATGGTGGTGGC+AGG | + | chr1_2:73883059-73883078 | Msa0091710:CDS | 50.0% |
| !! | CGGTAACAGGCTGTTTCTTC+TGG | - | chr1_2:73883123-73883142 | None:intergenic | 50.0% |
| ! | CTTTTCCAAGGCTGGTAAGG+TGG | - | chr1_2:73883182-73883201 | None:intergenic | 50.0% |
| ! | CCATCACTCTTTTCCAAGGC+TGG | - | chr1_2:73883190-73883209 | None:intergenic | 50.0% |
| CCAGCCTTGGAAAAGAGTGA+TGG | + | chr1_2:73883187-73883206 | Msa0091710:CDS | 50.0% | |
| GCCTTGGAAAAGAGTGATGG+AGG | + | chr1_2:73883190-73883209 | Msa0091710:CDS | 50.0% | |
| ! | GGAAAAGAGTGATGGAGGAC+TGG | + | chr1_2:73883195-73883214 | Msa0091710:CDS | 50.0% |
| ! | TGGCATTGGGTGAGAAGTGT+TGG | - | chr1_2:73883624-73883643 | None:intergenic | 50.0% |
| TTGCGCCAAAACTCTAAGCG+AGG | - | chr1_2:73883738-73883757 | None:intergenic | 50.0% | |
| GGAGATGTGAGTAGGTAGCT+AGG | + | chr1_2:73884340-73884359 | Msa0091710:three_prime_UTR | 50.0% | |
| !! | GGGGGTGCCATTGGAAGAAA+TGG | - | chr1_2:73880805-73880824 | None:intergenic | 55.0% |
| !! | AGAAGAAGTGGGGGTGCCAT+TGG | - | chr1_2:73880814-73880833 | None:intergenic | 55.0% |
| !! | GCTCTAGAATGCACCGGAGA+AGG | + | chr1_2:73882298-73882317 | Msa0091710:CDS | 55.0% |
| !! | TTCGTTGGTGTTGCCTGACG+AGG | + | chr1_2:73882532-73882551 | Msa0091710:CDS | 55.0% |
| CTACGATGACCTCCAGATGC+AGG | - | chr1_2:73882704-73882723 | None:intergenic | 55.0% | |
| CTGCATCTGGAGGTCATCGT+AGG | + | chr1_2:73882702-73882721 | Msa0091710:CDS | 55.0% | |
| GCAGGAATAGACGTAGTGCC+CGG | + | chr1_2:73883077-73883096 | Msa0091710:CDS | 55.0% | |
| ACAGCCTGTTACCGGAGATC+CGG | + | chr1_2:73883129-73883148 | Msa0091710:CDS | 55.0% | |
| TGGATGTGTTGCCGGATCTC+CGG | - | chr1_2:73883143-73883162 | None:intergenic | 55.0% | |
| AGGCTGGTAAGGTGGAGATC+TGG | - | chr1_2:73883174-73883193 | None:intergenic | 55.0% | |
| GATCTCCACCTTACCAGCCT+TGG | + | chr1_2:73883174-73883193 | Msa0091710:CDS | 55.0% | |
| TATAATCTCGCGGTCCTGGG+TGG | - | chr1_2:73883953-73883972 | None:intergenic | 55.0% | |
| GCTCTTCACCATCATTGGGC+TGG | + | chr1_2:73884013-73884032 | Msa0091710:three_prime_UTR | 55.0% | |
| TGTATGGAGCTGAGCTCCCT+TGG | + | chr1_2:73884470-73884489 | Msa0091710:three_prime_UTR | 55.0% | |
| AGGGGCTGAGATTCGAACCC+CGG | + | chr1_2:73881308-73881327 | Msa0091710:intron | 60.0% | |
| ! | GAGCACCGCACGCTGGAAAA+TGG | + | chr1_2:73882073-73882092 | Msa0091710:CDS | 60.0% |
| ! | CATTTTCCCAGGGCCTCGTC+AGG | - | chr1_2:73882548-73882567 | None:intergenic | 60.0% |
| AAGCAGCAGCCTGCATCTGG+AGG | + | chr1_2:73882692-73882711 | Msa0091710:CDS | 60.0% | |
| GTTGCCGGATCTCCGGTAAC+AGG | - | chr1_2:73883136-73883155 | None:intergenic | 60.0% | |
| GGGAGCTCAGCTCCATACAG+TGG | - | chr1_2:73884469-73884488 | None:intergenic | 60.0% | |
| ! | CATGAACGAGCACCGCACGC+TGG | + | chr1_2:73882066-73882085 | Msa0091710:CDS | 65.0% |
| GTGTTGCCTGACGAGGCCCT+GGG | + | chr1_2:73882539-73882558 | Msa0091710:CDS | 65.0% | |
| CGGAAGCAGCAGCCTGCATC+TGG | + | chr1_2:73882689-73882708 | Msa0091710:CDS | 65.0% | |
| ! | GGTGTTGCCTGACGAGGCCC+TGG | + | chr1_2:73882538-73882557 | Msa0091710:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 73880764 | 73884503 | 73880764 | ID=Msa0091710;Name=Msa0091710 |
| chr1_2 | mRNA | 73880764 | 73884503 | 73880764 | ID=Msa0091710-mRNA-1;Parent=Msa0091710;Name=Msa0091710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=10|1|1|1|0.87|0.77|9|377|477 |
| chr1_2 | exon | 73880764 | 73880848 | 73880764 | ID=Msa0091710-mRNA-1:exon:25956;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73880937 | 73881013 | 73880937 | ID=Msa0091710-mRNA-1:exon:25957;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73881964 | 73882108 | 73881964 | ID=Msa0091710-mRNA-1:exon:25958;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73882250 | 73882397 | 73882250 | ID=Msa0091710-mRNA-1:exon:25959;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73882510 | 73882833 | 73882510 | ID=Msa0091710-mRNA-1:exon:25960;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73882945 | 73883517 | 73882945 | ID=Msa0091710-mRNA-1:exon:25961;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73883721 | 73883779 | 73883721 | ID=Msa0091710-mRNA-1:exon:25962;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73883958 | 73884034 | 73883958 | ID=Msa0091710-mRNA-1:exon:25963;Parent=Msa0091710-mRNA-1 |
| chr1_2 | exon | 73884171 | 73884503 | 73884171 | ID=Msa0091710-mRNA-1:exon:25964;Parent=Msa0091710-mRNA-1 |
| chr1_2 | five_prime_UTR | 73880764 | 73880773 | 73880764 | ID=Msa0091710-mRNA-1:five_prime_utr;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73880774 | 73880848 | 73880774 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73880937 | 73881013 | 73880937 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73881964 | 73882108 | 73881964 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73882250 | 73882397 | 73882250 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73882510 | 73882833 | 73882510 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73882945 | 73883517 | 73882945 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73883721 | 73883779 | 73883721 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | CDS | 73883958 | 73883990 | 73883958 | ID=Msa0091710-mRNA-1:cds;Parent=Msa0091710-mRNA-1 |
| chr1_2 | three_prime_UTR | 73883991 | 73884034 | 73883991 | ID=Msa0091710-mRNA-1:three_prime_utr;Parent=Msa0091710-mRNA-1 |
| chr1_2 | three_prime_UTR | 73884171 | 73884503 | 73884171 | ID=Msa0091710-mRNA-1:three_prime_utr;Parent=Msa0091710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
