AlfalfaGEDB | Msa0091910

M. sativa cultivar zhongmu-4 / Msa0091910

KEGG: K09338
GO: GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009735 GO:0009755 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0010016 GO:0010017 GO:0010022 GO:0010033 GO:0010073 GO:0010154 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010582 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048364 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071365 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071840 GO:0080090 GO:0080127 GO:0090567 GO:0097159 GO:0099402 GO:0104004 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905328 GO:2000112 GO:2000113 GO:2001141
PFAM: PF04618.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091910	sp\|Q05466\|HAT4_ARATH	65.101	298	88	7	1	296	1	284	5.54e-108	318

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091910	B7FJ62	98.311	296	5	0	1	296	1	296	0.0	598

TFs/TRs:

Gene ID	Type	Classification
Msa0091910	TF	HB-HD-ZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0091910	Msa0780470	0.916402	1.859307e-85	-8.615850e-47
Msa0091910	Msa0796560	0.961451	1.022731e-119	-8.615850e-47
Msa0091910	Msa0834010	0.961345	1.356200e-119	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091910	MtrunA17_Chr5g0399491	98.311	296	5	0	1	296	1	296	0.0	598
Msa0091910	MtrunA17_Chr4g0055851	72.333	300	54	9	1	293	2	279	2.57e-138	392
Msa0091910	MtrunA17_Chr8g0335131	56.958	309	101	10	4	288	3	303	3.00e-94	281
Msa0091910	MtrunA17_Chr7g0258831	64.516	186	58	4	72	250	89	273	9.58e-68	213
Msa0091910	MtrunA17_Chr1g0175651	60.204	196	54	4	71	251	82	268	1.13e-66	210
Msa0091910	MtrunA17_Chr2g0308611	73.026	152	35	4	112	260	175	323	1.17e-65	209
Msa0091910	MtrunA17_Chr4g0054421	78.049	123	26	1	127	249	118	239	5.60e-61	194
Msa0091910	MtrunA17_Chr5g0400781	65.972	144	46	2	127	268	114	256	4.47e-60	192
Msa0091910	MtrunA17_Chr1g0151971	51.667	180	73	5	96	263	88	265	1.19e-51	171
Msa0091910	MtrunA17_Chr4g0044091	62.097	124	42	1	130	248	59	182	1.93e-45	152
Msa0091910	MtrunA17_Chr2g0299031	57.627	118	50	0	136	253	82	199	3.07e-41	142
Msa0091910	MtrunA17_Chr3g0135331	65.217	115	38	2	135	249	144	256	4.61e-39	139
Msa0091910	MtrunA17_Chr4g0071411	61.404	114	41	1	138	248	90	203	1.19e-38	135
Msa0091910	MtrunA17_Chr7g0217111	42.537	134	63	3	97	225	49	173	2.53e-20	88.2
Msa0091910	MtrunA17_Chr5g0415941	39.535	172	77	6	78	228	20	185	1.59e-19	87.0
Msa0091910	MtrunA17_Chr8g0362151	41.463	123	70	2	100	222	43	163	5.92e-19	84.7
Msa0091910	MtrunA17_Chr6g0450991	43.590	117	65	1	136	252	67	182	1.55e-18	83.6
Msa0091910	MtrunA17_Chr4g0060031	52.632	95	38	1	134	221	93	187	4.84e-18	83.2
Msa0091910	MtrunA17_Chr6g0453021	31.401	207	106	5	18	223	12	183	5.39e-18	82.0
Msa0091910	MtrunA17_Chr5g0416391	39.516	124	75	0	100	223	41	164	1.12e-17	81.3
Msa0091910	MtrunA17_Chr3g0119291	38.926	149	65	4	97	223	9	153	3.33e-17	79.3
Msa0091910	MtrunA17_Chr7g0265521	45.455	88	48	0	136	223	63	150	9.34e-17	77.8
Msa0091910	MtrunA17_Chr3g0123691	40.625	128	68	2	128	247	52	179	2.03e-16	77.8
Msa0091910	MtrunA17_Chr8g0381741	47.475	99	45	1	132	223	50	148	2.34e-16	77.8
Msa0091910	MtrunA17_Chr1g0179581	48.193	83	43	0	136	218	28	110	5.17e-16	72.8
Msa0091910	MtrunA17_Chr8g0362751	46.809	94	43	1	136	222	89	182	1.17e-15	75.5
Msa0091910	MtrunA17_Chr8g0346251	42.683	82	47	0	140	221	45	126	1.20e-11	63.5
Msa0091910	MtrunA17_Chr5g0410711	31.690	142	91	1	80	221	42	177	2.26e-11	64.3
Msa0091910	MtrunA17_Chr5g0403691	41.905	105	59	1	128	230	45	149	9.66e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091910	AT4G16780.1	65.101	298	88	7	1	296	1	284	5.63e-109	318
Msa0091910	AT5G47370.1	59.936	312	80	13	1	296	1	283	7.82e-107	312
Msa0091910	AT4G17460.1	59.032	310	85	11	1	296	1	282	2.93e-105	308
Msa0091910	AT3G60390.1	59.060	298	84	14	17	287	23	309	1.33e-91	275
Msa0091910	AT2G44910.1	53.165	316	115	12	4	288	3	316	3.19e-84	256
Msa0091910	AT5G06710.1	61.421	197	64	6	91	277	135	329	2.91e-67	213
Msa0091910	AT4G37790.1	59.358	187	57	5	105	273	86	271	3.56e-62	198
Msa0091910	AT2G22800.1	72.308	130	32	2	123	249	97	225	2.69e-58	188
Msa0091910	AT2G01430.1	52.299	174	65	4	92	256	95	259	5.51e-44	151
Msa0091910	AT1G70920.1	60.976	123	37	2	135	257	68	179	8.85e-38	133
Msa0091910	AT1G70920.2	60.976	123	37	2	135	257	38	149	9.10e-38	132
Msa0091910	AT5G06710.4	58.879	107	34	4	91	187	135	241	4.60e-27	107
Msa0091910	AT1G69780.1	41.221	131	67	2	98	223	47	172	4.93e-20	88.2
Msa0091910	AT2G01430.2	47.059	119	49	3	92	204	95	205	5.82e-19	84.0
Msa0091910	AT1G26960.1	46.341	123	61	4	103	223	39	158	1.78e-18	83.2
Msa0091910	AT3G01470.1	48.387	93	41	1	136	221	68	160	6.16e-17	79.3
Msa0091910	AT5G03790.1	37.313	134	83	1	136	269	77	209	4.44e-16	76.3
Msa0091910	AT5G15150.1	38.983	118	65	1	106	223	92	202	2.64e-15	75.5
Msa0091910	AT1G27045.4	47.748	111	45	3	127	224	53	163	3.64e-15	73.9
Msa0091910	AT3G01220.1	45.745	94	47	1	136	225	87	180	4.97e-15	74.3
Msa0091910	AT1G27045.1	54.321	81	31	1	127	201	53	133	9.36e-15	72.4
Msa0091910	AT1G27045.2	59.091	66	27	0	136	201	17	82	1.03e-14	71.2
Msa0091910	AT1G27045.5	59.091	66	27	0	136	201	25	90	1.08e-14	71.2
Msa0091910	AT1G27045.3	59.091	66	27	0	136	201	25	90	1.08e-14	71.2
Msa0091910	AT5G65310.1	35.417	144	84	3	133	269	69	210	1.87e-14	72.8
Msa0091910	AT4G40060.1	44.330	97	47	1	134	223	57	153	1.96e-14	72.8
Msa0091910	AT5G65310.2	35.417	144	84	3	133	269	51	192	2.40e-14	72.4
Msa0091910	AT2G22430.1	44.792	96	49	1	134	225	60	155	4.51e-14	71.6
Msa0091910	AT5G03790.2	43.956	91	51	0	136	226	77	167	3.94e-13	67.4
Msa0091910	AT2G46680.1	41.053	95	52	1	139	229	35	129	4.87e-13	68.2
Msa0091910	AT2G46680.2	40.909	88	52	0	139	226	35	122	5.39e-13	67.8
Msa0091910	AT2G36610.1	39.796	98	51	1	135	224	70	167	1.14e-12	65.9
Msa0091910	AT4G36740.1	43.678	87	49	0	136	222	55	141	6.28e-12	64.3
Msa0091910	AT4G36740.2	43.678	87	49	0	136	222	56	142	6.43e-12	64.3
Msa0091910	AT5G53980.1	42.391	92	53	0	131	222	6	97	4.46e-11	60.5
Msa0091910	AT2G18550.1	43.678	87	49	0	136	222	61	147	6.09e-11	61.6

Find 92 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAAAGTCAAATTTATATTT+TGG	0.135798	1_2:+74130760	Msa0091910:three_prime_UTR
AGTATTGAAAAGGAAGATTT+TGG	0.211828	1_2:+74128791	Msa0091910:CDS
TTGACCCCATTGTCTTCTTT+TGG	0.246088	1_2:+74130444	Msa0091910:three_prime_UTR
TATATAGAAAGGAGAGAAAA+TGG	0.247436	1_2:-74128599	None:intergenic
AGATTAAGGTATTGAGGATT+TGG	0.288551	1_2:-74128848	None:intergenic
GAGAATAATTGATTGGTCTT+TGG	0.289348	1_2:-74129420	None:intergenic
ATGAAACAAATGAAACAAAA+TGG	0.303398	1_2:+74130318	Msa0091910:three_prime_UTR
GGAAATGGACGTGGGTGATT+TGG	0.317565	1_2:-74130195	None:intergenic
TGCTTTGAACACAAAATTCA+TGG	0.325878	1_2:-74130354	None:intergenic
TTGAAGAAGACATAAGATTA+AGG	0.336048	1_2:-74128862	None:intergenic
ATTGGCACTTGCAAAACAAT+TGG	0.337338	1_2:+74129576	Msa0091910:CDS
GCCCATGGTCCCACAGGAAA+TGG	0.346020	1_2:-74130210	None:intergenic
AAGTGGGGAGGCAGGGTTGT+GGG	0.366973	1_2:-74128625	None:intergenic
TCAAAGCACTGTTTAAGATA+TGG	0.381394	1_2:+74130369	Msa0091910:three_prime_UTR
TTTGAGGGAAGCTCAAACTT+AGG	0.385146	1_2:-74128820	None:intergenic
GTGCTAGACAAGTTGAAGTT+TGG	0.390504	1_2:+74129605	Msa0091910:CDS
AAGAAGACGCTGAAACTTCA+AGG	0.402562	1_2:+74129381	Msa0091910:CDS
TCTCTTCGAGAATAATTGAT+TGG	0.404047	1_2:-74129427	None:intergenic
TTATAATGAAGTGGGGAGGC+AGG	0.416609	1_2:-74128633	None:intergenic
GAAGTGGGGAGGCAGGGTTG+TGG	0.417504	1_2:-74128626	None:intergenic
CTAAACCAAAAGAAGACAAT+GGG	0.420191	1_2:-74130449	None:intergenic
GACATAAGATTAAGGTATTG+AGG	0.421167	1_2:-74128854	None:intergenic
GATGTGAATCGGTTACCTTC+TGG	0.421492	1_2:+74129221	Msa0091910:CDS
TTTACATGCAGATCGGGATT+CGG	0.433835	1_2:+74129154	Msa0091910:intron
ACACTTGAAACGGTGCTGTT+TGG	0.443597	1_2:-74129278	None:intergenic
ATATAGAAAGGAGAGAAAAT+GGG	0.445801	1_2:-74128598	None:intergenic
TTGGCACTTGCAAAACAATT+GGG	0.452760	1_2:+74129577	Msa0091910:CDS
TGGCTTAATTGCTTTAGGAT+TGG	0.454242	1_2:+74130780	Msa0091910:three_prime_UTR
GGGCACATGGTAAGAGTTGT+TGG	0.457834	1_2:-74130105	None:intergenic
GTCCATTTCCTGTGGGACCA+TGG	0.458770	1_2:+74130208	Msa0091910:CDS
AGTGGGGAGGCAGGGTTGTG+GGG	0.473121	1_2:-74128624	None:intergenic
TGAAAATAGACGGTTACAAA+AGG	0.474850	1_2:+74130023	Msa0091910:CDS
TTTACCACTCACACTTGAAA+CGG	0.484021	1_2:-74129288	None:intergenic
TCCATTTCCTGTGGGACCAT+GGG	0.490692	1_2:+74130209	Msa0091910:CDS
TTAAGGTATTGAGGATTTGG+TGG	0.491711	1_2:-74128845	None:intergenic
AGAAGCGAAAGAGAAGTTAC+AGG	0.494456	1_2:+74129311	Msa0091910:CDS
GCAGCATCAACGGCAGATGA+TGG	0.502736	1_2:-74130150	None:intergenic
ATTGAAAGTAGAAGGAGAAG+AGG	0.503918	1_2:-74128891	None:intergenic
GATGACTTGACATAAAGTTA+TGG	0.506271	1_2:+74128550	Msa0091910:five_prime_UTR
TTAATTAGATCACTTTACAT+AGG	0.513484	1_2:-74130694	None:intergenic
ATCCGTACAAGTTAAGATCT+AGG	0.515404	1_2:-74130276	None:intergenic
TCATTTGCATGTAGAATTGT+GGG	0.520585	1_2:-74130077	None:intergenic
GTCATTTGCATGTAGAATTG+TGG	0.521859	1_2:-74130078	None:intergenic
ATGGATGATTATAATGAAGT+GGG	0.522107	1_2:-74128641	None:intergenic
TCGATTCCTCGGAGAAGTAA+AGG	0.525636	1_2:-74129200	None:intergenic
TATAATGAAGTGGGGAGGCA+GGG	0.526426	1_2:-74128632	None:intergenic
TCCGAGGAATCGATGTGAAT+CGG	0.527394	1_2:+74129210	Msa0091910:CDS
GTTGTGGGGAATATATAGAA+AGG	0.529222	1_2:-74128610	None:intergenic
GTCCTAGATCTTAACTTGTA+CGG	0.534286	1_2:+74130274	Msa0091910:exon
GCTGTGGCCCATGGTCCCAC+AGG	0.538822	1_2:-74130216	None:intergenic
TCAAAGGTCCTATGTTGGAT+AGG	0.542840	1_2:-74130243	None:intergenic
ATTAGATCACTTTACATAGG+TGG	0.544859	1_2:-74130691	None:intergenic
ACGACGCGTGGCAGCATCAA+CGG	0.548952	1_2:-74130160	None:intergenic
ATGGAAAGAGATTGTTCAAG+AGG	0.550270	1_2:+74129347	Msa0091910:CDS
TGCCACGCGTCGTCATCCTA+TGG	0.554799	1_2:+74130170	Msa0091910:CDS
ACCGATTCACATCGATTCCT+CGG	0.556594	1_2:-74129211	None:intergenic
CGTGGGTGATTTGGAGCCAT+AGG	0.560215	1_2:-74130186	None:intergenic
TATAGAAAGGAGAGAAAATG+GGG	0.563355	1_2:-74128597	None:intergenic
CACATGGTAAGAGTTGTTGG+TGG	0.564954	1_2:-74130102	None:intergenic
ATAGGAGCAGCTGTGGCCCA+TGG	0.566808	1_2:-74130225	None:intergenic
GATGGATGATTATAATGAAG+TGG	0.580263	1_2:-74128642	None:intergenic
GGTCCCACAGGAAATGGACG+TGG	0.582860	1_2:-74130204	None:intergenic
GGTTTCAAAATCGTAGAGCA+AGG	0.583437	1_2:+74129626	Msa0091910:CDS
ACAGCAACACGCTCACAAGA+GGG	0.586849	1_2:-74130126	None:intergenic
ATGTTGGATAGGAGCAGCTG+TGG	0.588541	1_2:-74130232	None:intergenic
CAGCTGCTCCTATCCAACAT+AGG	0.588914	1_2:+74130235	Msa0091910:CDS
ACTAAACCAAAAGAAGACAA+TGG	0.591131	1_2:-74130450	None:intergenic
GTGTATCAAAGGTCCTATGT+TGG	0.591308	1_2:-74130248	None:intergenic
CACCCACGTCCATTTCCTGT+GGG	0.600865	1_2:+74130201	Msa0091910:CDS
AACAGCAACACGCTCACAAG+AGG	0.612400	1_2:-74130127	None:intergenic
ATCTAACGGATGAAAATAGA+CGG	0.614300	1_2:+74130013	Msa0091910:CDS
TCACCCACGTCCATTTCCTG+TGG	0.615645	1_2:+74130200	Msa0091910:CDS
TGGATGATTATAATGAAGTG+GGG	0.615876	1_2:-74128640	None:intergenic
TCTAGGACGGAGTGTATCAA+AGG	0.615968	1_2:-74130259	None:intergenic
TCTTCACAATCAGCACCAGA+AGG	0.621185	1_2:-74129236	None:intergenic
ACGCTCACAAGAGGGGCACA+TGG	0.624285	1_2:-74130118	None:intergenic
TTTCTGGTATTACAAGAACA+AGG	0.631546	1_2:+74128755	Msa0091910:five_prime_UTR
GCTGATTGTGAAGAAGAAGC+AGG	0.645646	1_2:+74129245	Msa0091910:CDS
ATGATTATAATGAAGTGGGG+AGG	0.647038	1_2:-74128637	None:intergenic
GTACAAGTTAAGATCTAGGA+CGG	0.655097	1_2:-74130272	None:intergenic
AGCCATAGGATGACGACGCG+TGG	0.657092	1_2:-74130172	None:intergenic
TACAGGTGAAGATCTTGACA+TGG	0.657130	1_2:+74129328	Msa0091910:CDS
CAGCAACACGCTCACAAGAG+GGG	0.670133	1_2:-74130125	None:intergenic
AGCACCGTTTCAAGTGTGAG+TGG	0.674395	1_2:+74129284	Msa0091910:CDS
AGACATGCAGAATCGAAGAA+CGG	0.674956	1_2:+74129177	Msa0091910:CDS
TAGAAAGGAGAGAAAATGGG+GGG	0.675474	1_2:-74128595	None:intergenic
GAACGGCCTTTACTTCTCCG+AGG	0.691005	1_2:+74129194	Msa0091910:CDS
ATAGAAAGGAGAGAAAATGG+GGG	0.701273	1_2:-74128596	None:intergenic
GTCCCACAGGAAATGGACGT+GGG	0.703771	1_2:-74130203	None:intergenic
CATTTGCATGTAGAATTGTG+GGG	0.706166	1_2:-74130076	None:intergenic
AAGATGTTGTGAGAATCTAA+CGG	0.732801	1_2:+74129999	Msa0091910:CDS
TAAACCAAAAGAAGACAATG+GGG	0.742497	1_2:-74130448	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAATTATATTTTTTTTTTT+AGG	+	chr1_2:74129511-74129530	Msa0091910:intron	0.0%
!!!	TAAATTATATTTTTTTTTTT+AGG	+	chr1_2:74129511-74129530	Msa0091910:intron	0.0%
!!!	TAAAAATCAATTTAAGTTAA+TGG	-	chr1_2:74129847-74129866	None:intergenic	10.0%
!!	CAATATTTATTTATTTATGT+TGG	+	chr1_2:74129913-74129932	Msa0091910:intron	10.0%
!!!	TAAAAGTCAAATTTATATTT+TGG	+	chr1_2:74130760-74130779	Msa0091910:three_prime_UTR	10.0%
!!!	TAAAAATCAATTTAAGTTAA+TGG	-	chr1_2:74129847-74129866	None:intergenic	10.0%
!!	CAATATTTATTTATTTATGT+TGG	+	chr1_2:74129913-74129932	Msa0091910:intron	10.0%
!!!	TAAAAGTCAAATTTATATTT+TGG	+	chr1_2:74130760-74130779	Msa0091910:three_prime_UTR	10.0%
!!	ATGAAAATGATTGTTAATTA+AGG	-	chr1_2:74129017-74129036	None:intergenic	15.0%
!!	TTACACTTAATTAATACTTA+CGG	-	chr1_2:74129480-74129499	None:intergenic	15.0%
!!!	TATCAATATTTTTTTTGTGA+AGG	+	chr1_2:74129884-74129903	Msa0091910:intron	15.0%
!!	ATGAAAATGATTGTTAATTA+AGG	-	chr1_2:74129017-74129036	None:intergenic	15.0%
!!	TTACACTTAATTAATACTTA+CGG	-	chr1_2:74129480-74129499	None:intergenic	15.0%
!!!	TATCAATATTTTTTTTGTGA+AGG	+	chr1_2:74129884-74129903	Msa0091910:intron	15.0%
!!!	AGAAAAAATGAGTATTGAAA+AGG	+	chr1_2:74128781-74128800	Msa0091910:exon	20.0%
!!	TATTATTCCAAAGTTGTAAT+TGG	-	chr1_2:74128987-74129006	None:intergenic	20.0%
!!	TACACTTAATTAATACTTAC+GGG	-	chr1_2:74129479-74129498	None:intergenic	20.0%
!!	TTGTTTGTAGAAACAAAAAT+TGG	+	chr1_2:74129558-74129577	Msa0091910:intron	20.0%
!!!	TTTAAAACTCAAAAGATATC+CGG	+	chr1_2:74129686-74129705	Msa0091910:intron	20.0%
!!	ATGAAACAAATGAAACAAAA+TGG	+	chr1_2:74130318-74130337	Msa0091910:three_prime_UTR	20.0%
!!	ATGTACTTCATTTAATCTTA+TGG	-	chr1_2:74130536-74130555	None:intergenic	20.0%
!!	ATTAAATGAAGTACATATGA+TGG	+	chr1_2:74130540-74130559	Msa0091910:intron	20.0%
!!	TTAATTAGATCACTTTACAT+AGG	-	chr1_2:74130697-74130716	None:intergenic	20.0%
!!!	AGAAAAAATGAGTATTGAAA+AGG	+	chr1_2:74128781-74128800	Msa0091910:exon	20.0%
!!	TATTATTCCAAAGTTGTAAT+TGG	-	chr1_2:74128987-74129006	None:intergenic	20.0%
!!	TACACTTAATTAATACTTAC+GGG	-	chr1_2:74129479-74129498	None:intergenic	20.0%
!!	TTGTTTGTAGAAACAAAAAT+TGG	+	chr1_2:74129558-74129577	Msa0091910:intron	20.0%
!!!	TTTAAAACTCAAAAGATATC+CGG	+	chr1_2:74129686-74129705	Msa0091910:intron	20.0%
!!	ATGAAACAAATGAAACAAAA+TGG	+	chr1_2:74130318-74130337	Msa0091910:three_prime_UTR	20.0%
!!	ATGTACTTCATTTAATCTTA+TGG	-	chr1_2:74130536-74130555	None:intergenic	20.0%
!!	ATTAAATGAAGTACATATGA+TGG	+	chr1_2:74130540-74130559	Msa0091910:intron	20.0%
!!	TTAATTAGATCACTTTACAT+AGG	-	chr1_2:74130697-74130716	None:intergenic	20.0%
!	ATATAGAAAGGAGAGAAAAT+GGG	-	chr1_2:74128601-74128620	None:intergenic	25.0%
!	TATATAGAAAGGAGAGAAAA+TGG	-	chr1_2:74128602-74128621	None:intergenic	25.0%
!	ATGGATGATTATAATGAAGT+GGG	-	chr1_2:74128644-74128663	None:intergenic	25.0%
!!!	TAAAGTGCTTTGTTTTTTGA+AGG	-	chr1_2:74128729-74128748	None:intergenic	25.0%
!!!	AGTATTGAAAAGGAAGATTT+TGG	+	chr1_2:74128791-74128810	Msa0091910:CDS	25.0%
!	TTGAAGAAGACATAAGATTA+AGG	-	chr1_2:74128865-74128884	None:intergenic	25.0%
!!!	AATGATGTTTTTACTTCTTC+AGG	+	chr1_2:74128932-74128951	Msa0091910:CDS	25.0%
!	GTAAAGGAAGGAAATTATAT+AGG	-	chr1_2:74129052-74129071	None:intergenic	25.0%
!	TAAGATAGATTAGAGAGTAA+AGG	-	chr1_2:74129068-74129087	None:intergenic	25.0%
!!!	ATCTTATTTTACATGCAGAT+CGG	+	chr1_2:74129147-74129166	Msa0091910:intron	25.0%
!	ACACTTAATTAATACTTACG+GGG	-	chr1_2:74129478-74129497	None:intergenic	25.0%
!!!	TTGACTAGTCTTTATTTAGT+TGG	+	chr1_2:74129658-74129677	Msa0091910:intron	25.0%
!!	GTTTGTTAAATTGTGATTTC+AGG	+	chr1_2:74129935-74129954	Msa0091910:intron	25.0%
!!	TGTTAGAAGAAATGATTTTG+TGG	+	chr1_2:74130393-74130412	Msa0091910:three_prime_UTR	25.0%
!!	GTTAGAAGAAATGATTTTGT+GGG	+	chr1_2:74130394-74130413	Msa0091910:three_prime_UTR	25.0%
!	ATGTACTTCATTTAATCTGA+TGG	+	chr1_2:74130615-74130634	Msa0091910:intron	25.0%
!!!	TATTTTGGCTTAATTGCTTT+AGG	+	chr1_2:74130775-74130794	Msa0091910:three_prime_UTR	25.0%
!	ATATAGAAAGGAGAGAAAAT+GGG	-	chr1_2:74128601-74128620	None:intergenic	25.0%
!	TATATAGAAAGGAGAGAAAA+TGG	-	chr1_2:74128602-74128621	None:intergenic	25.0%
!	ATGGATGATTATAATGAAGT+GGG	-	chr1_2:74128644-74128663	None:intergenic	25.0%
!!!	TAAAGTGCTTTGTTTTTTGA+AGG	-	chr1_2:74128729-74128748	None:intergenic	25.0%
!!!	AGTATTGAAAAGGAAGATTT+TGG	+	chr1_2:74128791-74128810	Msa0091910:CDS	25.0%
!	TTGAAGAAGACATAAGATTA+AGG	-	chr1_2:74128865-74128884	None:intergenic	25.0%
!!!	AATGATGTTTTTACTTCTTC+AGG	+	chr1_2:74128932-74128951	Msa0091910:CDS	25.0%
!	GTAAAGGAAGGAAATTATAT+AGG	-	chr1_2:74129052-74129071	None:intergenic	25.0%
!	TAAGATAGATTAGAGAGTAA+AGG	-	chr1_2:74129068-74129087	None:intergenic	25.0%
!!!	ATCTTATTTTACATGCAGAT+CGG	+	chr1_2:74129147-74129166	Msa0091910:intron	25.0%
!	ACACTTAATTAATACTTACG+GGG	-	chr1_2:74129478-74129497	None:intergenic	25.0%
!!!	TTGACTAGTCTTTATTTAGT+TGG	+	chr1_2:74129658-74129677	Msa0091910:intron	25.0%
!!	GTTTGTTAAATTGTGATTTC+AGG	+	chr1_2:74129935-74129954	Msa0091910:intron	25.0%
!!	TGTTAGAAGAAATGATTTTG+TGG	+	chr1_2:74130393-74130412	Msa0091910:three_prime_UTR	25.0%
!!	GTTAGAAGAAATGATTTTGT+GGG	+	chr1_2:74130394-74130413	Msa0091910:three_prime_UTR	25.0%
!	ATGTACTTCATTTAATCTGA+TGG	+	chr1_2:74130615-74130634	Msa0091910:intron	25.0%
!!!	TATTTTGGCTTAATTGCTTT+AGG	+	chr1_2:74130775-74130794	Msa0091910:three_prime_UTR	25.0%
	GATGACTTGACATAAAGTTA+TGG	+	chr1_2:74128550-74128569	Msa0091910:five_prime_UTR	30.0%
	TATAGAAAGGAGAGAAAATG+GGG	-	chr1_2:74128600-74128619	None:intergenic	30.0%
	TGGATGATTATAATGAAGTG+GGG	-	chr1_2:74128643-74128662	None:intergenic	30.0%
	GATGGATGATTATAATGAAG+TGG	-	chr1_2:74128645-74128664	None:intergenic	30.0%
!!!	TTTGTTTTTTGAAGGAGGTT+GGG	-	chr1_2:74128721-74128740	None:intergenic	30.0%
!!!	AAGCACTTTAGTTTTCTTTC+TGG	+	chr1_2:74128739-74128758	Msa0091910:five_prime_UTR	30.0%
!	TTTCTGGTATTACAAGAACA+AGG	+	chr1_2:74128755-74128774	Msa0091910:five_prime_UTR	30.0%
!!	AGATTAAGGTATTGAGGATT+TGG	-	chr1_2:74128851-74128870	None:intergenic	30.0%
!!	GACATAAGATTAAGGTATTG+AGG	-	chr1_2:74128857-74128876	None:intergenic	30.0%
!!	TTTTGAGGATTGAAAGTAGA+AGG	-	chr1_2:74128902-74128921	None:intergenic	30.0%
	GTAAAAACATCATTCCAAGA+AGG	-	chr1_2:74128926-74128945	None:intergenic	30.0%
	ATAGATTAGAGAGTAAAGGA+AGG	-	chr1_2:74129064-74129083	None:intergenic	30.0%
!!!	TCTTATTTTACATGCAGATC+GGG	+	chr1_2:74129148-74129167	Msa0091910:intron	30.0%
!!	GAGAATAATTGATTGGTCTT+TGG	-	chr1_2:74129423-74129442	None:intergenic	30.0%
	TCTCTTCGAGAATAATTGAT+TGG	-	chr1_2:74129430-74129449	None:intergenic	30.0%
	AAGATGTTGTGAGAATCTAA+CGG	+	chr1_2:74129999-74130018	Msa0091910:CDS	30.0%
!	ATCTAACGGATGAAAATAGA+CGG	+	chr1_2:74130013-74130032	Msa0091910:CDS	30.0%
	TGAAAATAGACGGTTACAAA+AGG	+	chr1_2:74130023-74130042	Msa0091910:CDS	30.0%
	TCATTTGCATGTAGAATTGT+GGG	-	chr1_2:74130080-74130099	None:intergenic	30.0%
!	TGCTTTGAACACAAAATTCA+TGG	-	chr1_2:74130357-74130376	None:intergenic	30.0%
!!	TCAAAGCACTGTTTAAGATA+TGG	+	chr1_2:74130369-74130388	Msa0091910:three_prime_UTR	30.0%
	TAAACCAAAAGAAGACAATG+GGG	-	chr1_2:74130451-74130470	None:intergenic	30.0%
	CTAAACCAAAAGAAGACAAT+GGG	-	chr1_2:74130452-74130471	None:intergenic	30.0%
	ACTAAACCAAAAGAAGACAA+TGG	-	chr1_2:74130453-74130472	None:intergenic	30.0%
	AAATGAAGTACATATGATGG+AGG	+	chr1_2:74130543-74130562	Msa0091910:intron	30.0%
	ATTAGATCACTTTACATAGG+TGG	-	chr1_2:74130694-74130713	None:intergenic	30.0%
	GATGACTTGACATAAAGTTA+TGG	+	chr1_2:74128550-74128569	Msa0091910:five_prime_UTR	30.0%
	TATAGAAAGGAGAGAAAATG+GGG	-	chr1_2:74128600-74128619	None:intergenic	30.0%
	TGGATGATTATAATGAAGTG+GGG	-	chr1_2:74128643-74128662	None:intergenic	30.0%
	GATGGATGATTATAATGAAG+TGG	-	chr1_2:74128645-74128664	None:intergenic	30.0%
!!!	TTTGTTTTTTGAAGGAGGTT+GGG	-	chr1_2:74128721-74128740	None:intergenic	30.0%
!!!	AAGCACTTTAGTTTTCTTTC+TGG	+	chr1_2:74128739-74128758	Msa0091910:five_prime_UTR	30.0%
!	TTTCTGGTATTACAAGAACA+AGG	+	chr1_2:74128755-74128774	Msa0091910:five_prime_UTR	30.0%
!!	AGATTAAGGTATTGAGGATT+TGG	-	chr1_2:74128851-74128870	None:intergenic	30.0%
!!	GACATAAGATTAAGGTATTG+AGG	-	chr1_2:74128857-74128876	None:intergenic	30.0%
!!	TTTTGAGGATTGAAAGTAGA+AGG	-	chr1_2:74128902-74128921	None:intergenic	30.0%
	GTAAAAACATCATTCCAAGA+AGG	-	chr1_2:74128926-74128945	None:intergenic	30.0%
	ATAGATTAGAGAGTAAAGGA+AGG	-	chr1_2:74129064-74129083	None:intergenic	30.0%
!!!	TCTTATTTTACATGCAGATC+GGG	+	chr1_2:74129148-74129167	Msa0091910:intron	30.0%
!!	GAGAATAATTGATTGGTCTT+TGG	-	chr1_2:74129423-74129442	None:intergenic	30.0%
	TCTCTTCGAGAATAATTGAT+TGG	-	chr1_2:74129430-74129449	None:intergenic	30.0%
	AAGATGTTGTGAGAATCTAA+CGG	+	chr1_2:74129999-74130018	Msa0091910:CDS	30.0%
!	ATCTAACGGATGAAAATAGA+CGG	+	chr1_2:74130013-74130032	Msa0091910:CDS	30.0%
	TGAAAATAGACGGTTACAAA+AGG	+	chr1_2:74130023-74130042	Msa0091910:CDS	30.0%
	TCATTTGCATGTAGAATTGT+GGG	-	chr1_2:74130080-74130099	None:intergenic	30.0%
!	TGCTTTGAACACAAAATTCA+TGG	-	chr1_2:74130357-74130376	None:intergenic	30.0%
!!	TCAAAGCACTGTTTAAGATA+TGG	+	chr1_2:74130369-74130388	Msa0091910:three_prime_UTR	30.0%
	TAAACCAAAAGAAGACAATG+GGG	-	chr1_2:74130451-74130470	None:intergenic	30.0%
	CTAAACCAAAAGAAGACAAT+GGG	-	chr1_2:74130452-74130471	None:intergenic	30.0%
	ACTAAACCAAAAGAAGACAA+TGG	-	chr1_2:74130453-74130472	None:intergenic	30.0%
	AAATGAAGTACATATGATGG+AGG	+	chr1_2:74130543-74130562	Msa0091910:intron	30.0%
	ATTAGATCACTTTACATAGG+TGG	-	chr1_2:74130694-74130713	None:intergenic	30.0%
	ATAGAAAGGAGAGAAAATGG+GGG	-	chr1_2:74128599-74128618	None:intergenic	35.0%
	GTTGTGGGGAATATATAGAA+AGG	-	chr1_2:74128613-74128632	None:intergenic	35.0%
	ATGATTATAATGAAGTGGGG+AGG	-	chr1_2:74128640-74128659	None:intergenic	35.0%
	CAATTGAGAGAGAGAGATTA+TGG	-	chr1_2:74128667-74128686	None:intergenic	35.0%
!!!	TTGTTTTTTGAAGGAGGTTG+GGG	-	chr1_2:74128720-74128739	None:intergenic	35.0%
!!!	CTTTGTTTTTTGAAGGAGGT+TGG	-	chr1_2:74128722-74128741	None:intergenic	35.0%
!!!	AGTGCTTTGTTTTTTGAAGG+AGG	-	chr1_2:74128726-74128745	None:intergenic	35.0%
!!	TTAAGGTATTGAGGATTTGG+TGG	-	chr1_2:74128848-74128867	None:intergenic	35.0%
	ATTGAAAGTAGAAGGAGAAG+AGG	-	chr1_2:74128894-74128913	None:intergenic	35.0%
	TCAATCCTCAAAAACCTTCT+TGG	+	chr1_2:74128909-74128928	Msa0091910:CDS	35.0%
!	TCATTCCAAGAAGGTTTTTG+AGG	-	chr1_2:74128917-74128936	None:intergenic	35.0%
	ATCTGGTCCAATTACAACTT+TGG	+	chr1_2:74128977-74128996	Msa0091910:intron	35.0%
	TTTACCACTCACACTTGAAA+CGG	-	chr1_2:74129291-74129310	None:intergenic	35.0%
	ATGGAAAGAGATTGTTCAAG+AGG	+	chr1_2:74129347-74129366	Msa0091910:CDS	35.0%
	ATTGGCACTTGCAAAACAAT+TGG	+	chr1_2:74129576-74129595	Msa0091910:CDS	35.0%
	TTGGCACTTGCAAAACAATT+GGG	+	chr1_2:74129577-74129596	Msa0091910:CDS	35.0%
!	GAGATGCATGTTTTCATGTT+TGG	+	chr1_2:74129797-74129816	Msa0091910:intron	35.0%
	TTTCATGTTTGGTATCACGT+TGG	+	chr1_2:74129808-74129827	Msa0091910:intron	35.0%
	CATTTGCATGTAGAATTGTG+GGG	-	chr1_2:74130079-74130098	None:intergenic	35.0%
	GTCATTTGCATGTAGAATTG+TGG	-	chr1_2:74130081-74130100	None:intergenic	35.0%
	GTACAAGTTAAGATCTAGGA+CGG	-	chr1_2:74130275-74130294	None:intergenic	35.0%
!!	GTCCTAGATCTTAACTTGTA+CGG	+	chr1_2:74130274-74130293	Msa0091910:exon	35.0%
	ATCCGTACAAGTTAAGATCT+AGG	-	chr1_2:74130279-74130298	None:intergenic	35.0%
	GGTTAAAAACAACTTTCCCA+TGG	+	chr1_2:74130636-74130655	Msa0091910:intron	35.0%
	TAAAAACAACTTTCCCATGG+TGG	+	chr1_2:74130639-74130658	Msa0091910:intron	35.0%
	AAAAACAACTTTCCCATGGT+GGG	+	chr1_2:74130640-74130659	Msa0091910:intron	35.0%
	ACATAGGTGGCATTTAACAT+GGG	-	chr1_2:74130681-74130700	None:intergenic	35.0%
	TACATAGGTGGCATTTAACA+TGG	-	chr1_2:74130682-74130701	None:intergenic	35.0%
!!	TGGCTTAATTGCTTTAGGAT+TGG	+	chr1_2:74130780-74130799	Msa0091910:three_prime_UTR	35.0%
	ATAGAAAGGAGAGAAAATGG+GGG	-	chr1_2:74128599-74128618	None:intergenic	35.0%
	GTTGTGGGGAATATATAGAA+AGG	-	chr1_2:74128613-74128632	None:intergenic	35.0%
	ATGATTATAATGAAGTGGGG+AGG	-	chr1_2:74128640-74128659	None:intergenic	35.0%
	CAATTGAGAGAGAGAGATTA+TGG	-	chr1_2:74128667-74128686	None:intergenic	35.0%
!!!	TTGTTTTTTGAAGGAGGTTG+GGG	-	chr1_2:74128720-74128739	None:intergenic	35.0%
!!!	CTTTGTTTTTTGAAGGAGGT+TGG	-	chr1_2:74128722-74128741	None:intergenic	35.0%
!!!	AGTGCTTTGTTTTTTGAAGG+AGG	-	chr1_2:74128726-74128745	None:intergenic	35.0%
!!	TTAAGGTATTGAGGATTTGG+TGG	-	chr1_2:74128848-74128867	None:intergenic	35.0%
	ATTGAAAGTAGAAGGAGAAG+AGG	-	chr1_2:74128894-74128913	None:intergenic	35.0%
	TCAATCCTCAAAAACCTTCT+TGG	+	chr1_2:74128909-74128928	Msa0091910:CDS	35.0%
!	TCATTCCAAGAAGGTTTTTG+AGG	-	chr1_2:74128917-74128936	None:intergenic	35.0%
	ATCTGGTCCAATTACAACTT+TGG	+	chr1_2:74128977-74128996	Msa0091910:intron	35.0%
	TTTACCACTCACACTTGAAA+CGG	-	chr1_2:74129291-74129310	None:intergenic	35.0%
	ATGGAAAGAGATTGTTCAAG+AGG	+	chr1_2:74129347-74129366	Msa0091910:CDS	35.0%
	ATTGGCACTTGCAAAACAAT+TGG	+	chr1_2:74129576-74129595	Msa0091910:CDS	35.0%
	TTGGCACTTGCAAAACAATT+GGG	+	chr1_2:74129577-74129596	Msa0091910:CDS	35.0%
!	GAGATGCATGTTTTCATGTT+TGG	+	chr1_2:74129797-74129816	Msa0091910:intron	35.0%
	TTTCATGTTTGGTATCACGT+TGG	+	chr1_2:74129808-74129827	Msa0091910:intron	35.0%
	CATTTGCATGTAGAATTGTG+GGG	-	chr1_2:74130079-74130098	None:intergenic	35.0%
	GTCATTTGCATGTAGAATTG+TGG	-	chr1_2:74130081-74130100	None:intergenic	35.0%
	GTACAAGTTAAGATCTAGGA+CGG	-	chr1_2:74130275-74130294	None:intergenic	35.0%
!!	GTCCTAGATCTTAACTTGTA+CGG	+	chr1_2:74130274-74130293	Msa0091910:exon	35.0%
	ATCCGTACAAGTTAAGATCT+AGG	-	chr1_2:74130279-74130298	None:intergenic	35.0%
	GGTTAAAAACAACTTTCCCA+TGG	+	chr1_2:74130636-74130655	Msa0091910:intron	35.0%
	TAAAAACAACTTTCCCATGG+TGG	+	chr1_2:74130639-74130658	Msa0091910:intron	35.0%
	AAAAACAACTTTCCCATGGT+GGG	+	chr1_2:74130640-74130659	Msa0091910:intron	35.0%
	ACATAGGTGGCATTTAACAT+GGG	-	chr1_2:74130681-74130700	None:intergenic	35.0%
	TACATAGGTGGCATTTAACA+TGG	-	chr1_2:74130682-74130701	None:intergenic	35.0%
!!	TGGCTTAATTGCTTTAGGAT+TGG	+	chr1_2:74130780-74130799	Msa0091910:three_prime_UTR	35.0%
	TAGAAAGGAGAGAAAATGGG+GGG	-	chr1_2:74128598-74128617	None:intergenic	40.0%
	TGAGAGAGAGAGATTATGGA+TGG	-	chr1_2:74128663-74128682	None:intergenic	40.0%
!!!	TGTTTTTTGAAGGAGGTTGG+GGG	-	chr1_2:74128719-74128738	None:intergenic	40.0%
	TTTGAGGGAAGCTCAAACTT+AGG	-	chr1_2:74128823-74128842	None:intergenic	40.0%
!!!	GAGGATTTGGTGGATTTTGA+GGG	-	chr1_2:74128838-74128857	None:intergenic	40.0%
!!!	TGAGGATTTGGTGGATTTTG+AGG	-	chr1_2:74128839-74128858	None:intergenic	40.0%
	ATCCTTCCATTCTCTAGATC+TGG	+	chr1_2:74128960-74128979	Msa0091910:intron	40.0%
	ATTGGACCAGATCTAGAGAA+TGG	-	chr1_2:74128969-74128988	None:intergenic	40.0%
	TTTACATGCAGATCGGGATT+CGG	+	chr1_2:74129154-74129173	Msa0091910:intron	40.0%
	AGACATGCAGAATCGAAGAA+CGG	+	chr1_2:74129177-74129196	Msa0091910:CDS	40.0%
	AGAAGCGAAAGAGAAGTTAC+AGG	+	chr1_2:74129311-74129330	Msa0091910:CDS	40.0%
	TACAGGTGAAGATCTTGACA+TGG	+	chr1_2:74129328-74129347	Msa0091910:CDS	40.0%
	AAGAAGACGCTGAAACTTCA+AGG	+	chr1_2:74129381-74129400	Msa0091910:CDS	40.0%
!	GTGCTAGACAAGTTGAAGTT+TGG	+	chr1_2:74129605-74129624	Msa0091910:CDS	40.0%
	GGTTTCAAAATCGTAGAGCA+AGG	+	chr1_2:74129626-74129645	Msa0091910:CDS	40.0%
	TCAAAGGTCCTATGTTGGAT+AGG	-	chr1_2:74130246-74130265	None:intergenic	40.0%
	GTGTATCAAAGGTCCTATGT+TGG	-	chr1_2:74130251-74130270	None:intergenic	40.0%
!	TTGACCCCATTGTCTTCTTT+TGG	+	chr1_2:74130444-74130463	Msa0091910:three_prime_UTR	40.0%
	TGATGGAGGAAAGAGAAGAA+TGG	+	chr1_2:74130557-74130576	Msa0091910:intron	40.0%
	CTTGAAAATCTTCCCACCAT+GGG	-	chr1_2:74130655-74130674	None:intergenic	40.0%
	ACTTGAAAATCTTCCCACCA+TGG	-	chr1_2:74130656-74130675	None:intergenic	40.0%
	TAGAAAGGAGAGAAAATGGG+GGG	-	chr1_2:74128598-74128617	None:intergenic	40.0%
	TGAGAGAGAGAGATTATGGA+TGG	-	chr1_2:74128663-74128682	None:intergenic	40.0%
!!!	TGTTTTTTGAAGGAGGTTGG+GGG	-	chr1_2:74128719-74128738	None:intergenic	40.0%
	TTTGAGGGAAGCTCAAACTT+AGG	-	chr1_2:74128823-74128842	None:intergenic	40.0%
!!!	GAGGATTTGGTGGATTTTGA+GGG	-	chr1_2:74128838-74128857	None:intergenic	40.0%
!!!	TGAGGATTTGGTGGATTTTG+AGG	-	chr1_2:74128839-74128858	None:intergenic	40.0%
	ATCCTTCCATTCTCTAGATC+TGG	+	chr1_2:74128960-74128979	Msa0091910:intron	40.0%
	ATTGGACCAGATCTAGAGAA+TGG	-	chr1_2:74128969-74128988	None:intergenic	40.0%
	TTTACATGCAGATCGGGATT+CGG	+	chr1_2:74129154-74129173	Msa0091910:intron	40.0%
	AGACATGCAGAATCGAAGAA+CGG	+	chr1_2:74129177-74129196	Msa0091910:CDS	40.0%
	AGAAGCGAAAGAGAAGTTAC+AGG	+	chr1_2:74129311-74129330	Msa0091910:CDS	40.0%
	TACAGGTGAAGATCTTGACA+TGG	+	chr1_2:74129328-74129347	Msa0091910:CDS	40.0%
	AAGAAGACGCTGAAACTTCA+AGG	+	chr1_2:74129381-74129400	Msa0091910:CDS	40.0%
!	GTGCTAGACAAGTTGAAGTT+TGG	+	chr1_2:74129605-74129624	Msa0091910:CDS	40.0%
	GGTTTCAAAATCGTAGAGCA+AGG	+	chr1_2:74129626-74129645	Msa0091910:CDS	40.0%
	TCAAAGGTCCTATGTTGGAT+AGG	-	chr1_2:74130246-74130265	None:intergenic	40.0%
	GTGTATCAAAGGTCCTATGT+TGG	-	chr1_2:74130251-74130270	None:intergenic	40.0%
!	TTGACCCCATTGTCTTCTTT+TGG	+	chr1_2:74130444-74130463	Msa0091910:three_prime_UTR	40.0%
	TGATGGAGGAAAGAGAAGAA+TGG	+	chr1_2:74130557-74130576	Msa0091910:intron	40.0%
	CTTGAAAATCTTCCCACCAT+GGG	-	chr1_2:74130655-74130674	None:intergenic	40.0%
	ACTTGAAAATCTTCCCACCA+TGG	-	chr1_2:74130656-74130675	None:intergenic	40.0%
	TATAATGAAGTGGGGAGGCA+GGG	-	chr1_2:74128635-74128654	None:intergenic	45.0%
	TTATAATGAAGTGGGGAGGC+AGG	-	chr1_2:74128636-74128655	None:intergenic	45.0%
	GACCAGATCTAGAGAATGGA+AGG	-	chr1_2:74128965-74128984	None:intergenic	45.0%
	TCGATTCCTCGGAGAAGTAA+AGG	-	chr1_2:74129203-74129222	None:intergenic	45.0%
	TCCGAGGAATCGATGTGAAT+CGG	+	chr1_2:74129210-74129229	Msa0091910:CDS	45.0%
!!	ACCGATTCACATCGATTCCT+CGG	-	chr1_2:74129214-74129233	None:intergenic	45.0%
	GATGTGAATCGGTTACCTTC+TGG	+	chr1_2:74129221-74129240	Msa0091910:CDS	45.0%
	TCTTCACAATCAGCACCAGA+AGG	-	chr1_2:74129239-74129258	None:intergenic	45.0%
	GCTGATTGTGAAGAAGAAGC+AGG	+	chr1_2:74129245-74129264	Msa0091910:CDS	45.0%
!!	ACACTTGAAACGGTGCTGTT+TGG	-	chr1_2:74129281-74129300	None:intergenic	45.0%
	AAAGATATCCGGTGCATGTC+TGG	+	chr1_2:74129697-74129716	Msa0091910:intron	45.0%
	CACATGGTAAGAGTTGTTGG+TGG	-	chr1_2:74130105-74130124	None:intergenic	45.0%
!	TCTAGGACGGAGTGTATCAA+AGG	-	chr1_2:74130262-74130281	None:intergenic	45.0%
	TATAATGAAGTGGGGAGGCA+GGG	-	chr1_2:74128635-74128654	None:intergenic	45.0%
	TTATAATGAAGTGGGGAGGC+AGG	-	chr1_2:74128636-74128655	None:intergenic	45.0%
	GACCAGATCTAGAGAATGGA+AGG	-	chr1_2:74128965-74128984	None:intergenic	45.0%
	TCGATTCCTCGGAGAAGTAA+AGG	-	chr1_2:74129203-74129222	None:intergenic	45.0%
	TCCGAGGAATCGATGTGAAT+CGG	+	chr1_2:74129210-74129229	Msa0091910:CDS	45.0%
!!	ACCGATTCACATCGATTCCT+CGG	-	chr1_2:74129214-74129233	None:intergenic	45.0%
	GATGTGAATCGGTTACCTTC+TGG	+	chr1_2:74129221-74129240	Msa0091910:CDS	45.0%
	TCTTCACAATCAGCACCAGA+AGG	-	chr1_2:74129239-74129258	None:intergenic	45.0%
	GCTGATTGTGAAGAAGAAGC+AGG	+	chr1_2:74129245-74129264	Msa0091910:CDS	45.0%
!!	ACACTTGAAACGGTGCTGTT+TGG	-	chr1_2:74129281-74129300	None:intergenic	45.0%
	AAAGATATCCGGTGCATGTC+TGG	+	chr1_2:74129697-74129716	Msa0091910:intron	45.0%
	CACATGGTAAGAGTTGTTGG+TGG	-	chr1_2:74130105-74130124	None:intergenic	45.0%
!	TCTAGGACGGAGTGTATCAA+AGG	-	chr1_2:74130262-74130281	None:intergenic	45.0%
	AGAGAAAATGGGGGGTAGTG+GGG	-	chr1_2:74128590-74128609	None:intergenic	50.0%
	GAGAGAAAATGGGGGGTAGT+GGG	-	chr1_2:74128591-74128610	None:intergenic	50.0%
!	AGCACCGTTTCAAGTGTGAG+TGG	+	chr1_2:74129284-74129303	Msa0091910:CDS	50.0%
	CTGTGATACCAGACATGCAC+CGG	-	chr1_2:74129708-74129727	None:intergenic	50.0%
	GGGCACATGGTAAGAGTTGT+TGG	-	chr1_2:74130108-74130127	None:intergenic	50.0%
	ACAGCAACACGCTCACAAGA+GGG	-	chr1_2:74130129-74130148	None:intergenic	50.0%
	AACAGCAACACGCTCACAAG+AGG	-	chr1_2:74130130-74130149	None:intergenic	50.0%
	GGAAATGGACGTGGGTGATT+TGG	-	chr1_2:74130198-74130217	None:intergenic	50.0%
	TCCATTTCCTGTGGGACCAT+GGG	+	chr1_2:74130209-74130228	Msa0091910:CDS	50.0%
	ATGTTGGATAGGAGCAGCTG+TGG	-	chr1_2:74130235-74130254	None:intergenic	50.0%
	CAGCTGCTCCTATCCAACAT+AGG	+	chr1_2:74130235-74130254	Msa0091910:CDS	50.0%
	AGAGAAAATGGGGGGTAGTG+GGG	-	chr1_2:74128590-74128609	None:intergenic	50.0%
	GAGAGAAAATGGGGGGTAGT+GGG	-	chr1_2:74128591-74128610	None:intergenic	50.0%
!	AGCACCGTTTCAAGTGTGAG+TGG	+	chr1_2:74129284-74129303	Msa0091910:CDS	50.0%
	CTGTGATACCAGACATGCAC+CGG	-	chr1_2:74129708-74129727	None:intergenic	50.0%
	GGGCACATGGTAAGAGTTGT+TGG	-	chr1_2:74130108-74130127	None:intergenic	50.0%
	ACAGCAACACGCTCACAAGA+GGG	-	chr1_2:74130129-74130148	None:intergenic	50.0%
	AACAGCAACACGCTCACAAG+AGG	-	chr1_2:74130130-74130149	None:intergenic	50.0%
	GGAAATGGACGTGGGTGATT+TGG	-	chr1_2:74130198-74130217	None:intergenic	50.0%
	TCCATTTCCTGTGGGACCAT+GGG	+	chr1_2:74130209-74130228	Msa0091910:CDS	50.0%
	ATGTTGGATAGGAGCAGCTG+TGG	-	chr1_2:74130235-74130254	None:intergenic	50.0%
	CAGCTGCTCCTATCCAACAT+AGG	+	chr1_2:74130235-74130254	Msa0091910:CDS	50.0%
	GGAGAGAAAATGGGGGGTAG+TGG	-	chr1_2:74128592-74128611	None:intergenic	55.0%
	TTTGAAGGAGGTTGGGGGAG+AGG	-	chr1_2:74128714-74128733	None:intergenic	55.0%
	GAACGGCCTTTACTTCTCCG+AGG	+	chr1_2:74129194-74129213	Msa0091910:CDS	55.0%
	CAGCAACACGCTCACAAGAG+GGG	-	chr1_2:74130128-74130147	None:intergenic	55.0%
	GCAGCATCAACGGCAGATGA+TGG	-	chr1_2:74130153-74130172	None:intergenic	55.0%
!	CGTGGGTGATTTGGAGCCAT+AGG	-	chr1_2:74130189-74130208	None:intergenic	55.0%
	TCACCCACGTCCATTTCCTG+TGG	+	chr1_2:74130200-74130219	Msa0091910:CDS	55.0%
	CACCCACGTCCATTTCCTGT+GGG	+	chr1_2:74130201-74130220	Msa0091910:CDS	55.0%
	GTCCCACAGGAAATGGACGT+GGG	-	chr1_2:74130206-74130225	None:intergenic	55.0%
	GTCCATTTCCTGTGGGACCA+TGG	+	chr1_2:74130208-74130227	Msa0091910:CDS	55.0%
	GGAGAGAAAATGGGGGGTAG+TGG	-	chr1_2:74128592-74128611	None:intergenic	55.0%
	TTTGAAGGAGGTTGGGGGAG+AGG	-	chr1_2:74128714-74128733	None:intergenic	55.0%
	GAACGGCCTTTACTTCTCCG+AGG	+	chr1_2:74129194-74129213	Msa0091910:CDS	55.0%
	CAGCAACACGCTCACAAGAG+GGG	-	chr1_2:74130128-74130147	None:intergenic	55.0%
	GCAGCATCAACGGCAGATGA+TGG	-	chr1_2:74130153-74130172	None:intergenic	55.0%
!	CGTGGGTGATTTGGAGCCAT+AGG	-	chr1_2:74130189-74130208	None:intergenic	55.0%
	TCACCCACGTCCATTTCCTG+TGG	+	chr1_2:74130200-74130219	Msa0091910:CDS	55.0%
	CACCCACGTCCATTTCCTGT+GGG	+	chr1_2:74130201-74130220	Msa0091910:CDS	55.0%
	GTCCCACAGGAAATGGACGT+GGG	-	chr1_2:74130206-74130225	None:intergenic	55.0%
	GTCCATTTCCTGTGGGACCA+TGG	+	chr1_2:74130208-74130227	Msa0091910:CDS	55.0%
!!	AAATGGGGGGTAGTGGGGAG+TGG	-	chr1_2:74128585-74128604	None:intergenic	60.0%
	AAGTGGGGAGGCAGGGTTGT+GGG	-	chr1_2:74128628-74128647	None:intergenic	60.0%
!	ACGCTCACAAGAGGGGCACA+TGG	-	chr1_2:74130121-74130140	None:intergenic	60.0%
	ACGACGCGTGGCAGCATCAA+CGG	-	chr1_2:74130163-74130182	None:intergenic	60.0%
	TGCCACGCGTCGTCATCCTA+TGG	+	chr1_2:74130170-74130189	Msa0091910:CDS	60.0%
	AGCCATAGGATGACGACGCG+TGG	-	chr1_2:74130175-74130194	None:intergenic	60.0%
	GGTCCCACAGGAAATGGACG+TGG	-	chr1_2:74130207-74130226	None:intergenic	60.0%
	GCCCATGGTCCCACAGGAAA+TGG	-	chr1_2:74130213-74130232	None:intergenic	60.0%
	ATAGGAGCAGCTGTGGCCCA+TGG	-	chr1_2:74130228-74130247	None:intergenic	60.0%
!!	AAATGGGGGGTAGTGGGGAG+TGG	-	chr1_2:74128585-74128604	None:intergenic	60.0%
	AAGTGGGGAGGCAGGGTTGT+GGG	-	chr1_2:74128628-74128647	None:intergenic	60.0%
!	ACGCTCACAAGAGGGGCACA+TGG	-	chr1_2:74130121-74130140	None:intergenic	60.0%
	ACGACGCGTGGCAGCATCAA+CGG	-	chr1_2:74130163-74130182	None:intergenic	60.0%
	TGCCACGCGTCGTCATCCTA+TGG	+	chr1_2:74130170-74130189	Msa0091910:CDS	60.0%
	AGCCATAGGATGACGACGCG+TGG	-	chr1_2:74130175-74130194	None:intergenic	60.0%
	GGTCCCACAGGAAATGGACG+TGG	-	chr1_2:74130207-74130226	None:intergenic	60.0%
	GCCCATGGTCCCACAGGAAA+TGG	-	chr1_2:74130213-74130232	None:intergenic	60.0%
	ATAGGAGCAGCTGTGGCCCA+TGG	-	chr1_2:74130228-74130247	None:intergenic	60.0%
	AGTGGGGAGGCAGGGTTGTG+GGG	-	chr1_2:74128627-74128646	None:intergenic	65.0%
	GAAGTGGGGAGGCAGGGTTG+TGG	-	chr1_2:74128629-74128648	None:intergenic	65.0%
	AGTGGGGAGGCAGGGTTGTG+GGG	-	chr1_2:74128627-74128646	None:intergenic	65.0%
	GAAGTGGGGAGGCAGGGTTG+TGG	-	chr1_2:74128629-74128648	None:intergenic	65.0%
	GCTGTGGCCCATGGTCCCAC+AGG	-	chr1_2:74130219-74130238	None:intergenic	70.0%
	GCTGTGGCCCATGGTCCCAC+AGG	-	chr1_2:74130219-74130238	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	74128548	74130803	74128548	ID=Msa0091910;Name=Msa0091910
chr1_2	mRNA	74128548	74130803	74128548	ID=Msa0091910-mRNA-1;Parent=Msa0091910;Name=Msa0091910-mRNA-1;_AED=0.17;_eAED=0.17;_QI=240\|1\|1\|1\|0.75\|0.6\|5\|362\|296
chr1_2	exon	74128548	74128953	74128548	ID=Msa0091910-mRNA-1:exon:26127;Parent=Msa0091910-mRNA-1
chr1_2	exon	74129165	74129478	74129165	ID=Msa0091910-mRNA-1:exon:26128;Parent=Msa0091910-mRNA-1
chr1_2	exon	74129568	74129647	74129568	ID=Msa0091910-mRNA-1:exon:26129;Parent=Msa0091910-mRNA-1
chr1_2	exon	74129957	74130535	74129957	ID=Msa0091910-mRNA-1:exon:26130;Parent=Msa0091910-mRNA-1
chr1_2	exon	74130690	74130803	74130690	ID=Msa0091910-mRNA-1:exon:26131;Parent=Msa0091910-mRNA-1
chr1_2	five_prime_UTR	74128548	74128787	74128548	ID=Msa0091910-mRNA-1:five_prime_utr;Parent=Msa0091910-mRNA-1
chr1_2	CDS	74128788	74128953	74128788	ID=Msa0091910-mRNA-1:cds;Parent=Msa0091910-mRNA-1
chr1_2	CDS	74129165	74129478	74129165	ID=Msa0091910-mRNA-1:cds;Parent=Msa0091910-mRNA-1
chr1_2	CDS	74129568	74129647	74129568	ID=Msa0091910-mRNA-1:cds;Parent=Msa0091910-mRNA-1
chr1_2	CDS	74129957	74130287	74129957	ID=Msa0091910-mRNA-1:cds;Parent=Msa0091910-mRNA-1
chr1_2	three_prime_UTR	74130288	74130535	74130288	ID=Msa0091910-mRNA-1:three_prime_utr;Parent=Msa0091910-mRNA-1
chr1_2	three_prime_UTR	74130690	74130803	74130690	ID=Msa0091910-mRNA-1:three_prime_utr;Parent=Msa0091910-mRNA-1

Gene Sequence

>Msa0091910

ATGAGTATTGAAAAGGAAGATTTTGGTTTGAGCCTAAGTTTGAGCTTCCCTCAAAATCCACCAAATCCTCAATACCTTAATCTTATGTCTTCTTCAACTCATTCCTCTTCTCCTTCTACTTTCAATCCTCAAAAACCTTCTTGGAATGATGTTTTTACTTCTTCAGATCGGGATTCGGAGACATGCAGAATCGAAGAACGGCCTTTACTTCTCCGAGGAATCGATGTGAATCGGTTACCTTCTGGTGCTGATTGTGAAGAAGAAGCAGGAGTTTCATCACCAAACAGCACCGTTTCAAGTGTGAGTGGTAAAAGAAGCGAAAGAGAAGTTACAGGTGAAGATCTTGACATGGAAAGAGATTGTTCAAGAGGAATCAGTGATGAAGAAGACGCTGAAACTTCAAGGAAAAAACTTAGACTCACCAAAGACCAATCAATTATTCTCGAAGAGAGTTTCAAAGAACACAACACTCTTAACCCCAAACAAAAATTGGCACTTGCAAAACAATTGGGACTTCGTGCTAGACAAGTTGAAGTTTGGTTTCAAAATCGTAGAGCAAGGACTAAGTTGAAGCAAACAGAAGTAGACTGTGAGTTTTTGAAAAGATGTTGTGAGAATCTAACGGATGAAAATAGACGGTTACAAAAGGAAGTGCAAGAGTTAAGAGCATTGAAACTTTCCCCACAATTCTACATGCAAATGACACCACCAACAACTCTTACCATGTGCCCCTCTTGTGAGCGTGTTGCTGTTCCATCATCTGCCGTTGATGCTGCCACGCGTCGTCATCCTATGGCTCCAAATCACCCACGTCCATTTCCTGTGGGACCATGGGCCACAGCTGCTCCTATCCAACATAGGACCTTTGATACACTCCGTCCTAGATCTTAA

Protein sequence

>Msa0091910

MSIEKEDFGLSLSLSFPQNPPNPQYLNLMSSSTHSSSPSTFNPQKPSWNDVFTSSDRDSETCRIEERPLLLRGIDVNRLPSGADCEEEAGVSSPNSTVSSVSGKRSEREVTGEDLDMERDCSRGISDEEDAETSRKKLRLTKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSSAVDAATRRHPMAPNHPRPFPVGPWATAAPIQHRTFDTLRPRS*