AlfalfaGEDB | Msa0780470

M. sativa cultivar zhongmu-4 / Msa0780470

KEGG: K09338
GO: GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009735 GO:0009755 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0010016 GO:0010017 GO:0010022 GO:0010033 GO:0010073 GO:0010154 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010582 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048364 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071365 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071840 GO:0080090 GO:0080127 GO:0090567 GO:0097159 GO:0099402 GO:0104004 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905328 GO:2000112 GO:2000113 GO:2001141
PFAM: PF04618.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0780470	XP_003611347.1	98.311	296	5	0	1	296	1	296	0.0	598

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0780470	sp\|Q05466\|HAT4_ARATH	65.101	298	88	7	1	296	1	284	5.54e-108	318

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0780470	B7FJ62	98.311	296	5	0	1	296	1	296	0.0	598

TFs/TRs:

Gene ID	Type	Classification
Msa0780470	TF	HB-HD-ZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0091910	Msa0780470	0.916402	1.859307e-85	-8.615850e-47
Msa0780470	Msa0796560	0.890167	1.258795e-73	-8.615850e-47
Msa0780470	Msa0834010	0.874728	5.382250e-68	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0780470	MtrunA17_Chr5g0399491	98.311	296	5	0	1	296	1	296	0.0	598
Msa0780470	MtrunA17_Chr4g0055851	72.333	300	54	9	1	293	2	279	2.57e-138	392
Msa0780470	MtrunA17_Chr8g0335131	56.958	309	101	10	4	288	3	303	3.00e-94	281
Msa0780470	MtrunA17_Chr7g0258831	64.516	186	58	4	72	250	89	273	9.58e-68	213
Msa0780470	MtrunA17_Chr1g0175651	60.204	196	54	4	71	251	82	268	1.13e-66	210
Msa0780470	MtrunA17_Chr2g0308611	73.026	152	35	4	112	260	175	323	1.17e-65	209
Msa0780470	MtrunA17_Chr4g0054421	78.049	123	26	1	127	249	118	239	5.60e-61	194
Msa0780470	MtrunA17_Chr5g0400781	65.972	144	46	2	127	268	114	256	4.47e-60	192
Msa0780470	MtrunA17_Chr1g0151971	51.667	180	73	5	96	263	88	265	1.19e-51	171
Msa0780470	MtrunA17_Chr4g0044091	62.097	124	42	1	130	248	59	182	1.93e-45	152
Msa0780470	MtrunA17_Chr2g0299031	57.627	118	50	0	136	253	82	199	3.07e-41	142
Msa0780470	MtrunA17_Chr3g0135331	65.217	115	38	2	135	249	144	256	4.61e-39	139
Msa0780470	MtrunA17_Chr4g0071411	61.404	114	41	1	138	248	90	203	1.19e-38	135
Msa0780470	MtrunA17_Chr7g0217111	42.537	134	63	3	97	225	49	173	2.53e-20	88.2
Msa0780470	MtrunA17_Chr5g0415941	39.535	172	77	6	78	228	20	185	1.59e-19	87.0
Msa0780470	MtrunA17_Chr8g0362151	41.463	123	70	2	100	222	43	163	5.92e-19	84.7
Msa0780470	MtrunA17_Chr6g0450991	43.590	117	65	1	136	252	67	182	1.55e-18	83.6
Msa0780470	MtrunA17_Chr4g0060031	52.632	95	38	1	134	221	93	187	4.84e-18	83.2
Msa0780470	MtrunA17_Chr6g0453021	31.401	207	106	5	18	223	12	183	5.39e-18	82.0
Msa0780470	MtrunA17_Chr5g0416391	39.516	124	75	0	100	223	41	164	1.12e-17	81.3
Msa0780470	MtrunA17_Chr3g0119291	38.926	149	65	4	97	223	9	153	3.33e-17	79.3
Msa0780470	MtrunA17_Chr7g0265521	45.455	88	48	0	136	223	63	150	9.34e-17	77.8
Msa0780470	MtrunA17_Chr3g0123691	40.625	128	68	2	128	247	52	179	2.03e-16	77.8
Msa0780470	MtrunA17_Chr8g0381741	47.475	99	45	1	132	223	50	148	2.34e-16	77.8
Msa0780470	MtrunA17_Chr1g0179581	48.193	83	43	0	136	218	28	110	5.17e-16	72.8
Msa0780470	MtrunA17_Chr8g0362751	46.809	94	43	1	136	222	89	182	1.17e-15	75.5
Msa0780470	MtrunA17_Chr8g0346251	42.683	82	47	0	140	221	45	126	1.20e-11	63.5
Msa0780470	MtrunA17_Chr5g0410711	31.690	142	91	1	80	221	42	177	2.26e-11	64.3
Msa0780470	MtrunA17_Chr5g0403691	41.905	105	59	1	128	230	45	149	9.66e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0780470	AT4G16780.1	65.101	298	88	7	1	296	1	284	5.63e-109	318
Msa0780470	AT5G47370.1	59.936	312	80	13	1	296	1	283	7.82e-107	312
Msa0780470	AT4G17460.1	59.032	310	85	11	1	296	1	282	2.93e-105	308
Msa0780470	AT3G60390.1	59.060	298	84	14	17	287	23	309	1.33e-91	275
Msa0780470	AT2G44910.1	53.165	316	115	12	4	288	3	316	3.19e-84	256
Msa0780470	AT5G06710.1	61.421	197	64	6	91	277	135	329	2.91e-67	213
Msa0780470	AT4G37790.1	59.358	187	57	5	105	273	86	271	3.56e-62	198
Msa0780470	AT2G22800.1	72.308	130	32	2	123	249	97	225	2.69e-58	188
Msa0780470	AT2G01430.1	52.299	174	65	4	92	256	95	259	5.51e-44	151
Msa0780470	AT1G70920.1	60.976	123	37	2	135	257	68	179	8.85e-38	133
Msa0780470	AT1G70920.2	60.976	123	37	2	135	257	38	149	9.10e-38	132
Msa0780470	AT5G06710.4	58.879	107	34	4	91	187	135	241	4.60e-27	107
Msa0780470	AT1G69780.1	41.221	131	67	2	98	223	47	172	4.93e-20	88.2
Msa0780470	AT2G01430.2	47.059	119	49	3	92	204	95	205	5.82e-19	84.0
Msa0780470	AT1G26960.1	46.341	123	61	4	103	223	39	158	1.78e-18	83.2
Msa0780470	AT3G01470.1	48.387	93	41	1	136	221	68	160	6.16e-17	79.3
Msa0780470	AT5G03790.1	37.313	134	83	1	136	269	77	209	4.44e-16	76.3
Msa0780470	AT5G15150.1	38.983	118	65	1	106	223	92	202	2.64e-15	75.5
Msa0780470	AT1G27045.4	47.748	111	45	3	127	224	53	163	3.64e-15	73.9
Msa0780470	AT3G01220.1	45.745	94	47	1	136	225	87	180	4.97e-15	74.3
Msa0780470	AT1G27045.1	54.321	81	31	1	127	201	53	133	9.36e-15	72.4
Msa0780470	AT1G27045.2	59.091	66	27	0	136	201	17	82	1.03e-14	71.2
Msa0780470	AT1G27045.5	59.091	66	27	0	136	201	25	90	1.08e-14	71.2
Msa0780470	AT1G27045.3	59.091	66	27	0	136	201	25	90	1.08e-14	71.2
Msa0780470	AT5G65310.1	35.417	144	84	3	133	269	69	210	1.87e-14	72.8
Msa0780470	AT4G40060.1	44.330	97	47	1	134	223	57	153	1.96e-14	72.8
Msa0780470	AT5G65310.2	35.417	144	84	3	133	269	51	192	2.40e-14	72.4
Msa0780470	AT2G22430.1	44.792	96	49	1	134	225	60	155	4.51e-14	71.6
Msa0780470	AT5G03790.2	43.956	91	51	0	136	226	77	167	3.94e-13	67.4
Msa0780470	AT2G46680.1	41.053	95	52	1	139	229	35	129	4.87e-13	68.2
Msa0780470	AT2G46680.2	40.909	88	52	0	139	226	35	122	5.39e-13	67.8
Msa0780470	AT2G36610.1	39.796	98	51	1	135	224	70	167	1.14e-12	65.9
Msa0780470	AT4G36740.1	43.678	87	49	0	136	222	55	141	6.28e-12	64.3
Msa0780470	AT4G36740.2	43.678	87	49	0	136	222	56	142	6.43e-12	64.3
Msa0780470	AT5G53980.1	42.391	92	53	0	131	222	6	97	4.46e-11	60.5
Msa0780470	AT2G18550.1	43.678	87	49	0	136	222	61	147	6.09e-11	61.6

Find 116 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAATTGCTGGGACTAATTA+TGG	0.129012	5_2:-62196992	Msa0780470:three_prime_UTR
TAAAAGTCAAATTTATATTT+TGG	0.135798	5_2:-62197101	Msa0780470:three_prime_UTR
AAACATTAGTTCAAGAATTT+AGG	0.141123	5_2:-62196893	Msa0780470:three_prime_UTR
AGTATTGAAAAGGAAGATTT+TGG	0.211828	5_2:-62198909	Msa0780470:CDS
ATTGCTTTAGGATTGGAATT+TGG	0.216882	5_2:-62197074	Msa0780470:three_prime_UTR
TGAACTAATGTTTGGTCATT+TGG	0.221194	5_2:+62196903	None:intergenic
TTGACCCCATTGTCTTCTTT+TGG	0.246088	5_2:-62197263	Msa0780470:three_prime_UTR
TATATAGAAAGGAGAGAAAA+TGG	0.247436	5_2:+62199112	None:intergenic
TAGAATAATTGATTGGTCTT+TGG	0.254387	5_2:+62198285	None:intergenic
CCTTCTTCTAGTTCTATAAT+TGG	0.258874	5_2:+62196840	None:intergenic
TCAAGAATTTAGGGGCCTTA+TGG	0.281449	5_2:-62196883	Msa0780470:three_prime_UTR
AGATTAAGGTATTGAGGATT+TGG	0.288551	5_2:+62198852	None:intergenic
AACATTAGTTCAAGAATTTA+GGG	0.293524	5_2:-62196892	Msa0780470:three_prime_UTR
CGTATCTTCAAAGTCATAAA+AGG	0.294812	5_2:+62197015	None:intergenic
ATGAAACAAATGAAACAAAA+TGG	0.303398	5_2:-62197389	Msa0780470:three_prime_UTR
GGAAATGGACGTGGGTGATT+TGG	0.317565	5_2:+62197512	None:intergenic
CAAGAATTTAGGGGCCTTAT+GGG	0.322130	5_2:-62196882	Msa0780470:three_prime_UTR
TGCTTTGAACACAAAATTCA+TGG	0.325878	5_2:+62197353	None:intergenic
TTGAAGAAGACATAAGATTA+AGG	0.336048	5_2:+62198838	None:intergenic
ATTGGCACTTGCAAAACAAT+TGG	0.337338	5_2:-62198131	Msa0780470:CDS
TAAATTCTTGAACTAATGTT+TGG	0.339245	5_2:+62196895	None:intergenic
GCCCATGGTCCCACAGGAAA+TGG	0.346020	5_2:+62197497	None:intergenic
GAACTAATGTTTGGTCATTT+GGG	0.352521	5_2:+62196904	None:intergenic
TTTGAAGATACGGCAATTGC+TGG	0.362281	5_2:-62197004	Msa0780470:three_prime_UTR
GGAAAATTGAACATTAATAA+AGG	0.363066	5_2:-62196934	Msa0780470:three_prime_UTR
AAGTGGGGAGGCAGGGTTGT+GGG	0.366973	5_2:+62199086	None:intergenic
TCAAAGCACTGTTTAAGATA+TGG	0.381394	5_2:-62197338	Msa0780470:three_prime_UTR
TTTGAGGGAAGCTCAAACTT+AGG	0.385146	5_2:+62198880	None:intergenic
GTGCTAGACAAGTTGAAGTT+TGG	0.390504	5_2:-62198102	Msa0780470:CDS
GATTGGAATTTGGAAATGTA+TGG	0.393903	5_2:-62197064	Msa0780470:three_prime_UTR
CAATTGCTGGGACTAATTAT+GGG	0.401969	5_2:-62196991	Msa0780470:three_prime_UTR
AAGAAGACGCTGAAACTTCA+AGG	0.402562	5_2:-62198324	Msa0780470:CDS
GGACTAATTATGGGTTGGTT+GGG	0.404842	5_2:-62196982	Msa0780470:three_prime_UTR
TTATAATGAAGTGGGGAGGC+AGG	0.416609	5_2:+62199078	None:intergenic
GAAGTGGGGAGGCAGGGTTG+TGG	0.417504	5_2:+62199085	None:intergenic
CTAAACCAAAAGAAGACAAT+GGG	0.420191	5_2:+62197258	None:intergenic
GACATAAGATTAAGGTATTG+AGG	0.421167	5_2:+62198846	None:intergenic
TCTCTTCTAGAATAATTGAT+TGG	0.421188	5_2:+62198278	None:intergenic
GATGTGAATCGGTTACCTTC+TGG	0.421492	5_2:-62198484	Msa0780470:CDS
AATTGGAAGGCTAAATCAAT+GGG	0.423173	5_2:+62196857	None:intergenic
GGGACTAATTATGGGTTGGT+TGG	0.429431	5_2:-62196983	Msa0780470:three_prime_UTR
TTTACATGCAGATCGGGATT+CGG	0.433835	5_2:-62198551	Msa0780470:intron
ACACTTGAAACGGTGCTGTT+TGG	0.443597	5_2:+62198427	None:intergenic
ATATAGAAAGGAGAGAAAAT+GGG	0.445801	5_2:+62199113	None:intergenic
TTGGCACTTGCAAAACAATT+GGG	0.452760	5_2:-62198130	Msa0780470:CDS
TGGCTTAATTGCTTTAGGAT+TGG	0.454242	5_2:-62197081	Msa0780470:three_prime_UTR
GGGCACATGGTAAGAGTTGT+TGG	0.457834	5_2:+62197602	None:intergenic
GTCCATTTCCTGTGGGACCA+TGG	0.458770	5_2:-62197499	Msa0780470:CDS
TAATTGGAAGGCTAAATCAA+TGG	0.462007	5_2:+62196856	None:intergenic
AGTGGGGAGGCAGGGTTGTG+GGG	0.473121	5_2:+62199087	None:intergenic
TGAAAATAGACGGTTACAAA+AGG	0.474850	5_2:-62197684	Msa0780470:CDS
CCAATTATAGAACTAGAAGA+AGG	0.483800	5_2:-62196840	None:intergenic
TTTACCACTCACACTTGAAA+CGG	0.484021	5_2:+62198417	None:intergenic
TCCATTTCCTGTGGGACCAT+GGG	0.490692	5_2:-62197498	Msa0780470:CDS
TTAAGGTATTGAGGATTTGG+TGG	0.491711	5_2:+62198855	None:intergenic
AGAAGCGAAAGAGAAGTTAC+AGG	0.494456	5_2:-62198394	Msa0780470:CDS
GCAGCATCAACGGCAGATGA+TGG	0.502736	5_2:+62197557	None:intergenic
ATTGAAAGTAGAAGGAGAAG+AGG	0.503918	5_2:+62198809	None:intergenic
GATGACTTGACATAAAGTTA+TGG	0.506271	5_2:-62199161	Msa0780470:five_prime_UTR
CTTCTAGTTCTATAATTGGA+AGG	0.513910	5_2:+62196844	None:intergenic
ATCCGTACAAGTTAAGATCT+AGG	0.515404	5_2:+62197431	None:intergenic
TAAATCAATGGGGACCCATA+AGG	0.515986	5_2:+62196868	None:intergenic
TCATTTGCATGTAGAATTGT+GGG	0.520585	5_2:+62197630	None:intergenic
GTCATTTGCATGTAGAATTG+TGG	0.521859	5_2:+62197629	None:intergenic
ATGGATGATTATAATGAAGT+GGG	0.522107	5_2:+62199070	None:intergenic
TCGATTCCTCGGAGAAGTAA+AGG	0.525636	5_2:+62198505	None:intergenic
TATAATGAAGTGGGGAGGCA+GGG	0.526426	5_2:+62199079	None:intergenic
TCCGAGGAATCGATGTGAAT+CGG	0.527394	5_2:-62198495	Msa0780470:CDS
GTTGTGGGGAATATATAGAA+AGG	0.529222	5_2:+62199101	None:intergenic
GTCCTAGATCTTAACTTGTA+CGG	0.534286	5_2:-62197433	Msa0780470:exon
TTGAAGATACGGCAATTGCT+GGG	0.535743	5_2:-62197003	Msa0780470:three_prime_UTR
GCTGTGGCCCATGGTCCCAC+AGG	0.538822	5_2:+62197491	None:intergenic
TCAAAGGTCCTATGTTGGAT+AGG	0.542840	5_2:+62197464	None:intergenic
TGCTGGGACTAATTATGGGT+TGG	0.543623	5_2:-62196987	Msa0780470:three_prime_UTR
ACGACGCGTGGCAGCATCAA+CGG	0.548952	5_2:+62197547	None:intergenic
ATGGAAAGAGATTGTTCAAG+AGG	0.550270	5_2:-62198358	Msa0780470:CDS
TGCCACGCGTCGTCATCCTA+TGG	0.554799	5_2:-62197537	Msa0780470:CDS
ACCGATTCACATCGATTCCT+CGG	0.556594	5_2:+62198494	None:intergenic
CGTGGGTGATTTGGAGCCAT+AGG	0.560215	5_2:+62197521	None:intergenic
TATAGAAAGGAGAGAAAATG+GGG	0.563355	5_2:+62199114	None:intergenic
CACATGGTAAGAGTTGTTGG+TGG	0.564954	5_2:+62197605	None:intergenic
ATAGGAGCAGCTGTGGCCCA+TGG	0.566808	5_2:+62197482	None:intergenic
GATGGATGATTATAATGAAG+TGG	0.580263	5_2:+62199069	None:intergenic
GGTCCCACAGGAAATGGACG+TGG	0.582860	5_2:+62197503	None:intergenic
GGTTTCAAAATCGTAGAGCA+AGG	0.583437	5_2:-62198081	Msa0780470:intron
ACAGCAACACGCTCACAAGA+GGG	0.586849	5_2:+62197581	None:intergenic
ATGTTGGATAGGAGCAGCTG+TGG	0.588541	5_2:+62197475	None:intergenic
CAGCTGCTCCTATCCAACAT+AGG	0.588914	5_2:-62197472	Msa0780470:CDS
ACTAAACCAAAAGAAGACAA+TGG	0.591131	5_2:+62197257	None:intergenic
GTGTATCAAAGGTCCTATGT+TGG	0.591308	5_2:+62197459	None:intergenic
CACCCACGTCCATTTCCTGT+GGG	0.600865	5_2:-62197506	Msa0780470:CDS
AACAGCAACACGCTCACAAG+AGG	0.612400	5_2:+62197580	None:intergenic
ATCTAACGGATGAAAATAGA+CGG	0.614300	5_2:-62197694	Msa0780470:CDS
TCACCCACGTCCATTTCCTG+TGG	0.615645	5_2:-62197507	Msa0780470:CDS
TGGATGATTATAATGAAGTG+GGG	0.615876	5_2:+62199071	None:intergenic
TCTAGGACGGAGTGTATCAA+AGG	0.615968	5_2:+62197448	None:intergenic
TTTCTTGTATTACAAGAACA+AGG	0.618850	5_2:-62198946	Msa0780470:five_prime_UTR
TCTTCACAATCAGCACCAGA+AGG	0.621185	5_2:+62198469	None:intergenic
ACGCTCACAAGAGGGGCACA+TGG	0.624285	5_2:+62197589	None:intergenic
GCTGATTGTGAAGAAGAAGC+AGG	0.645646	5_2:-62198460	Msa0780470:CDS
ATGATTATAATGAAGTGGGG+AGG	0.647038	5_2:+62199074	None:intergenic
ACATTAGTTCAAGAATTTAG+GGG	0.653857	5_2:-62196891	Msa0780470:three_prime_UTR
GTACAAGTTAAGATCTAGGA+CGG	0.655097	5_2:+62197435	None:intergenic
AGCCATAGGATGACGACGCG+TGG	0.657092	5_2:+62197535	None:intergenic
TACAGGTGAAGATCTTGACA+TGG	0.657130	5_2:-62198377	Msa0780470:CDS
CAGCAACACGCTCACAAGAG+GGG	0.670133	5_2:+62197582	None:intergenic
AGCACCGTTTCAAGTGTGAG+TGG	0.674395	5_2:-62198421	Msa0780470:CDS
AGACATGCAGAATCGAAGAA+CGG	0.674956	5_2:-62198528	Msa0780470:CDS
TAGAAAGGAGAGAAAATGGG+GGG	0.675474	5_2:+62199116	None:intergenic
GAACGGCCTTTACTTCTCCG+AGG	0.691005	5_2:-62198511	Msa0780470:CDS
ATAGAAAGGAGAGAAAATGG+GGG	0.701273	5_2:+62199115	None:intergenic
GTCCCACAGGAAATGGACGT+GGG	0.703771	5_2:+62197504	None:intergenic
CATTTGCATGTAGAATTGTG+GGG	0.706166	5_2:+62197631	None:intergenic
AAGATGTTGTGAGAATCTAA+CGG	0.732801	5_2:-62197708	Msa0780470:CDS
ATTGGAAGGCTAAATCAATG+GGG	0.737508	5_2:+62196858	None:intergenic
TAAACCAAAAGAAGACAATG+GGG	0.742497	5_2:+62197259	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTAAATTATTTTTTTTTTT+AGG	-	chr5_2:62197810-62197829	Msa0780470:intron	0.0%
!!!	TTTAAATTATTTTTTTTTTT+AGG	-	chr5_2:62197810-62197829	Msa0780470:intron	0.0%
!!!	TAAAAATCAATTTAAGTTAA+TGG	+	chr5_2:62198147-62198166	None:intergenic	10.0%
!!!	TTATCAATATTTTTTTTTGA+AGG	-	chr5_2:62198183-62198202	Msa0780470:intron	10.0%
!!	CAATATTTATTTATTTATGT+TGG	-	chr5_2:62198212-62198231	Msa0780470:intron	10.0%
!!!	TAAAAGTCAAATTTATATTT+TGG	-	chr5_2:62198905-62198924	Msa0780470:CDS	10.0%
!!!	TAAAAATCAATTTAAGTTAA+TGG	+	chr5_2:62198147-62198166	None:intergenic	10.0%
!!!	TTATCAATATTTTTTTTTGA+AGG	-	chr5_2:62198183-62198202	Msa0780470:intron	10.0%
!!	CAATATTTATTTATTTATGT+TGG	-	chr5_2:62198212-62198231	Msa0780470:intron	10.0%
!!!	TAAAAGTCAAATTTATATTT+TGG	-	chr5_2:62198905-62198924	Msa0780470:CDS	10.0%
!!	ATGAAAATGATTGTTAATTA+AGG	+	chr5_2:62197323-62197342	None:intergenic	15.0%
!!	TTACACTTAATTAATACTTA+CGG	+	chr5_2:62197781-62197800	None:intergenic	15.0%
!!	ATGAAAATGATTGTTAATTA+AGG	+	chr5_2:62197323-62197342	None:intergenic	15.0%
!!	TTACACTTAATTAATACTTA+CGG	+	chr5_2:62197781-62197800	None:intergenic	15.0%
!!!	GAAAAAAATGAGTATTGAAA+AGG	-	chr5_2:62197087-62197106	Msa0780470:three_prime_UTR	20.0%
!!	TATTATTCCAAAGTTGTAAT+TGG	+	chr5_2:62197293-62197312	None:intergenic	20.0%
!!	TACACTTAATTAATACTTAC+GGG	+	chr5_2:62197780-62197799	None:intergenic	20.0%
!!	TTGTTTGTAGAAACAAAAAT+TGG	-	chr5_2:62197857-62197876	Msa0780470:intron	20.0%
!!	ATGAAACAAATGAAACAAAA+TGG	-	chr5_2:62198617-62198636	Msa0780470:intron	20.0%
!!	GGAAAATTGAACATTAATAA+AGG	-	chr5_2:62199072-62199091	Msa0780470:five_prime_UTR	20.0%
!!	TAAATTCTTGAACTAATGTT+TGG	+	chr5_2:62199114-62199133	None:intergenic	20.0%
!!	AAACATTAGTTCAAGAATTT+AGG	-	chr5_2:62199113-62199132	Msa0780470:five_prime_UTR	20.0%
!!	AACATTAGTTCAAGAATTTA+GGG	-	chr5_2:62199114-62199133	Msa0780470:five_prime_UTR	20.0%
!!!	GAAAAAAATGAGTATTGAAA+AGG	-	chr5_2:62197087-62197106	Msa0780470:three_prime_UTR	20.0%
!!	TATTATTCCAAAGTTGTAAT+TGG	+	chr5_2:62197293-62197312	None:intergenic	20.0%
!!	TACACTTAATTAATACTTAC+GGG	+	chr5_2:62197780-62197799	None:intergenic	20.0%
!!	TTGTTTGTAGAAACAAAAAT+TGG	-	chr5_2:62197857-62197876	Msa0780470:intron	20.0%
!!	ATGAAACAAATGAAACAAAA+TGG	-	chr5_2:62198617-62198636	Msa0780470:intron	20.0%
!!	GGAAAATTGAACATTAATAA+AGG	-	chr5_2:62199072-62199091	Msa0780470:five_prime_UTR	20.0%
!!	TAAATTCTTGAACTAATGTT+TGG	+	chr5_2:62199114-62199133	None:intergenic	20.0%
!!	AAACATTAGTTCAAGAATTT+AGG	-	chr5_2:62199113-62199132	Msa0780470:five_prime_UTR	20.0%
!!	AACATTAGTTCAAGAATTTA+GGG	-	chr5_2:62199114-62199133	Msa0780470:five_prime_UTR	20.0%
!	ATATAGAAAGGAGAGAAAAT+GGG	+	chr5_2:62196896-62196915	None:intergenic	25.0%
!	TATATAGAAAGGAGAGAAAA+TGG	+	chr5_2:62196897-62196916	None:intergenic	25.0%
!	ATGGATGATTATAATGAAGT+GGG	+	chr5_2:62196939-62196958	None:intergenic	25.0%
!!!	TAAAGTGCTTTGTTTTTTGA+AGG	+	chr5_2:62197034-62197053	None:intergenic	25.0%
!	TTTCTTGTATTACAAGAACA+AGG	-	chr5_2:62197060-62197079	Msa0780470:three_prime_UTR	25.0%
!!!	AGTATTGAAAAGGAAGATTT+TGG	-	chr5_2:62197097-62197116	Msa0780470:three_prime_UTR	25.0%
!	TTGAAGAAGACATAAGATTA+AGG	+	chr5_2:62197171-62197190	None:intergenic	25.0%
!!!	AATGATGTTTTTACTTCTTC+AGG	-	chr5_2:62197238-62197257	Msa0780470:three_prime_UTR	25.0%
!	GTAAAGGAAGGAAATTATAT+AGG	+	chr5_2:62197358-62197377	None:intergenic	25.0%
!	TAAGATAGATTACAGAGTAA+AGG	+	chr5_2:62197374-62197393	None:intergenic	25.0%
!!!	ATCTTATTTTACATGCAGAT+CGG	-	chr5_2:62197448-62197467	Msa0780470:CDS	25.0%
!!!	TAGAATAATTGATTGGTCTT+TGG	+	chr5_2:62197724-62197743	None:intergenic	25.0%
!!!	TCTCTTCTAGAATAATTGAT+TGG	+	chr5_2:62197731-62197750	None:intergenic	25.0%
!	ACACTTAATTAATACTTACG+GGG	+	chr5_2:62197779-62197798	None:intergenic	25.0%
!!!	TTGACTAGTCTTTATTTAGT+TGG	-	chr5_2:62197957-62197976	Msa0780470:intron	25.0%
!	TTAAAACTCAAAGAGATATC+CGG	-	chr5_2:62197986-62198005	Msa0780470:intron	25.0%
!!	GTTTGTTAAATTGTGATTTC+AGG	-	chr5_2:62198234-62198253	Msa0780470:intron	25.0%
!!	TGTTAGAAGAAATGATTTTG+TGG	-	chr5_2:62198692-62198711	Msa0780470:intron	25.0%
!!	GTTAGAAGAAATGATTTTGT+GGG	-	chr5_2:62198693-62198712	Msa0780470:intron	25.0%
!!!	TATTTTGGCTTAATTGCTTT+AGG	-	chr5_2:62198920-62198939	Msa0780470:exon	25.0%
!!!	CTTTTATGACTTTGAAGATA+CGG	-	chr5_2:62198992-62199011	Msa0780470:five_prime_UTR	25.0%
!!!	AATTTTTTGGTGGAAGAAAA+TGG	-	chr5_2:62199051-62199070	Msa0780470:five_prime_UTR	25.0%
!	ACATTAGTTCAAGAATTTAG+GGG	-	chr5_2:62199115-62199134	Msa0780470:five_prime_UTR	25.0%
!	ATATAGAAAGGAGAGAAAAT+GGG	+	chr5_2:62196896-62196915	None:intergenic	25.0%
!	TATATAGAAAGGAGAGAAAA+TGG	+	chr5_2:62196897-62196916	None:intergenic	25.0%
!	ATGGATGATTATAATGAAGT+GGG	+	chr5_2:62196939-62196958	None:intergenic	25.0%
!!!	TAAAGTGCTTTGTTTTTTGA+AGG	+	chr5_2:62197034-62197053	None:intergenic	25.0%
!	TTTCTTGTATTACAAGAACA+AGG	-	chr5_2:62197060-62197079	Msa0780470:three_prime_UTR	25.0%
!!!	AGTATTGAAAAGGAAGATTT+TGG	-	chr5_2:62197097-62197116	Msa0780470:three_prime_UTR	25.0%
!	TTGAAGAAGACATAAGATTA+AGG	+	chr5_2:62197171-62197190	None:intergenic	25.0%
!!!	AATGATGTTTTTACTTCTTC+AGG	-	chr5_2:62197238-62197257	Msa0780470:three_prime_UTR	25.0%
!	GTAAAGGAAGGAAATTATAT+AGG	+	chr5_2:62197358-62197377	None:intergenic	25.0%
!	TAAGATAGATTACAGAGTAA+AGG	+	chr5_2:62197374-62197393	None:intergenic	25.0%
!!!	ATCTTATTTTACATGCAGAT+CGG	-	chr5_2:62197448-62197467	Msa0780470:CDS	25.0%
!!!	TAGAATAATTGATTGGTCTT+TGG	+	chr5_2:62197724-62197743	None:intergenic	25.0%
!!!	TCTCTTCTAGAATAATTGAT+TGG	+	chr5_2:62197731-62197750	None:intergenic	25.0%
!	ACACTTAATTAATACTTACG+GGG	+	chr5_2:62197779-62197798	None:intergenic	25.0%
!!!	TTGACTAGTCTTTATTTAGT+TGG	-	chr5_2:62197957-62197976	Msa0780470:intron	25.0%
!	TTAAAACTCAAAGAGATATC+CGG	-	chr5_2:62197986-62198005	Msa0780470:intron	25.0%
!!	GTTTGTTAAATTGTGATTTC+AGG	-	chr5_2:62198234-62198253	Msa0780470:intron	25.0%
!!	TGTTAGAAGAAATGATTTTG+TGG	-	chr5_2:62198692-62198711	Msa0780470:intron	25.0%
!!	GTTAGAAGAAATGATTTTGT+GGG	-	chr5_2:62198693-62198712	Msa0780470:intron	25.0%
!!!	TATTTTGGCTTAATTGCTTT+AGG	-	chr5_2:62198920-62198939	Msa0780470:exon	25.0%
!!!	CTTTTATGACTTTGAAGATA+CGG	-	chr5_2:62198992-62199011	Msa0780470:five_prime_UTR	25.0%
!!!	AATTTTTTGGTGGAAGAAAA+TGG	-	chr5_2:62199051-62199070	Msa0780470:five_prime_UTR	25.0%
!	ACATTAGTTCAAGAATTTAG+GGG	-	chr5_2:62199115-62199134	Msa0780470:five_prime_UTR	25.0%
	GATGACTTGACATAAAGTTA+TGG	-	chr5_2:62196845-62196864	Msa0780470:three_prime_UTR	30.0%
	TATAGAAAGGAGAGAAAATG+GGG	+	chr5_2:62196895-62196914	None:intergenic	30.0%
	TGGATGATTATAATGAAGTG+GGG	+	chr5_2:62196938-62196957	None:intergenic	30.0%
	GATGGATGATTATAATGAAG+TGG	+	chr5_2:62196940-62196959	None:intergenic	30.0%
!!!	TTTGTTTTTTGAAGGAGGTT+GGG	+	chr5_2:62197026-62197045	None:intergenic	30.0%
!!	AGATTAAGGTATTGAGGATT+TGG	+	chr5_2:62197157-62197176	None:intergenic	30.0%
!!	GACATAAGATTAAGGTATTG+AGG	+	chr5_2:62197163-62197182	None:intergenic	30.0%
!!	TTTTGAGGATTGAAAGTAGA+AGG	+	chr5_2:62197208-62197227	None:intergenic	30.0%
	GTAAAAACATCATTCCAAGA+AGG	+	chr5_2:62197232-62197251	None:intergenic	30.0%
	ATAGATTACAGAGTAAAGGA+AGG	+	chr5_2:62197370-62197389	None:intergenic	30.0%
!!!	TCTTATTTTACATGCAGATC+GGG	-	chr5_2:62197449-62197468	Msa0780470:CDS	30.0%
	AAGATGTTGTGAGAATCTAA+CGG	-	chr5_2:62198298-62198317	Msa0780470:CDS	30.0%
!	ATCTAACGGATGAAAATAGA+CGG	-	chr5_2:62198312-62198331	Msa0780470:CDS	30.0%
	TGAAAATAGACGGTTACAAA+AGG	-	chr5_2:62198322-62198341	Msa0780470:CDS	30.0%
	TCATTTGCATGTAGAATTGT+GGG	+	chr5_2:62198379-62198398	None:intergenic	30.0%
!	TGCTTTGAACACAAAATTCA+TGG	+	chr5_2:62198656-62198675	None:intergenic	30.0%
!!	TCAAAGCACTGTTTAAGATA+TGG	-	chr5_2:62198668-62198687	Msa0780470:intron	30.0%
	TAAACCAAAAGAAGACAATG+GGG	+	chr5_2:62198750-62198769	None:intergenic	30.0%
	CTAAACCAAAAGAAGACAAT+GGG	+	chr5_2:62198751-62198770	None:intergenic	30.0%
	ACTAAACCAAAAGAAGACAA+TGG	+	chr5_2:62198752-62198771	None:intergenic	30.0%
!!	ATTGCTTTAGGATTGGAATT+TGG	-	chr5_2:62198932-62198951	Msa0780470:exon	30.0%
	GATTGGAATTTGGAAATGTA+TGG	-	chr5_2:62198942-62198961	Msa0780470:five_prime_UTR	30.0%
	CGTATCTTCAAAGTCATAAA+AGG	+	chr5_2:62198994-62199013	None:intergenic	30.0%
	GAACTAATGTTTGGTCATTT+GGG	+	chr5_2:62199105-62199124	None:intergenic	30.0%
	TGAACTAATGTTTGGTCATT+TGG	+	chr5_2:62199106-62199125	None:intergenic	30.0%
	AATTGGAAGGCTAAATCAAT+GGG	+	chr5_2:62199152-62199171	None:intergenic	30.0%
	TAATTGGAAGGCTAAATCAA+TGG	+	chr5_2:62199153-62199172	None:intergenic	30.0%
!!	CTTCTAGTTCTATAATTGGA+AGG	+	chr5_2:62199165-62199184	None:intergenic	30.0%
	GATGACTTGACATAAAGTTA+TGG	-	chr5_2:62196845-62196864	Msa0780470:three_prime_UTR	30.0%
	TATAGAAAGGAGAGAAAATG+GGG	+	chr5_2:62196895-62196914	None:intergenic	30.0%
	TGGATGATTATAATGAAGTG+GGG	+	chr5_2:62196938-62196957	None:intergenic	30.0%
	GATGGATGATTATAATGAAG+TGG	+	chr5_2:62196940-62196959	None:intergenic	30.0%
!!!	TTTGTTTTTTGAAGGAGGTT+GGG	+	chr5_2:62197026-62197045	None:intergenic	30.0%
!!	AGATTAAGGTATTGAGGATT+TGG	+	chr5_2:62197157-62197176	None:intergenic	30.0%
!!	GACATAAGATTAAGGTATTG+AGG	+	chr5_2:62197163-62197182	None:intergenic	30.0%
!!	TTTTGAGGATTGAAAGTAGA+AGG	+	chr5_2:62197208-62197227	None:intergenic	30.0%
	GTAAAAACATCATTCCAAGA+AGG	+	chr5_2:62197232-62197251	None:intergenic	30.0%
	ATAGATTACAGAGTAAAGGA+AGG	+	chr5_2:62197370-62197389	None:intergenic	30.0%
!!!	TCTTATTTTACATGCAGATC+GGG	-	chr5_2:62197449-62197468	Msa0780470:CDS	30.0%
	AAGATGTTGTGAGAATCTAA+CGG	-	chr5_2:62198298-62198317	Msa0780470:CDS	30.0%
!	ATCTAACGGATGAAAATAGA+CGG	-	chr5_2:62198312-62198331	Msa0780470:CDS	30.0%
	TGAAAATAGACGGTTACAAA+AGG	-	chr5_2:62198322-62198341	Msa0780470:CDS	30.0%
	TCATTTGCATGTAGAATTGT+GGG	+	chr5_2:62198379-62198398	None:intergenic	30.0%
!	TGCTTTGAACACAAAATTCA+TGG	+	chr5_2:62198656-62198675	None:intergenic	30.0%
!!	TCAAAGCACTGTTTAAGATA+TGG	-	chr5_2:62198668-62198687	Msa0780470:intron	30.0%
	TAAACCAAAAGAAGACAATG+GGG	+	chr5_2:62198750-62198769	None:intergenic	30.0%
	CTAAACCAAAAGAAGACAAT+GGG	+	chr5_2:62198751-62198770	None:intergenic	30.0%
	ACTAAACCAAAAGAAGACAA+TGG	+	chr5_2:62198752-62198771	None:intergenic	30.0%
!!	ATTGCTTTAGGATTGGAATT+TGG	-	chr5_2:62198932-62198951	Msa0780470:exon	30.0%
	GATTGGAATTTGGAAATGTA+TGG	-	chr5_2:62198942-62198961	Msa0780470:five_prime_UTR	30.0%
	CGTATCTTCAAAGTCATAAA+AGG	+	chr5_2:62198994-62199013	None:intergenic	30.0%
	GAACTAATGTTTGGTCATTT+GGG	+	chr5_2:62199105-62199124	None:intergenic	30.0%
	TGAACTAATGTTTGGTCATT+TGG	+	chr5_2:62199106-62199125	None:intergenic	30.0%
	AATTGGAAGGCTAAATCAAT+GGG	+	chr5_2:62199152-62199171	None:intergenic	30.0%
	TAATTGGAAGGCTAAATCAA+TGG	+	chr5_2:62199153-62199172	None:intergenic	30.0%
!!	CTTCTAGTTCTATAATTGGA+AGG	+	chr5_2:62199165-62199184	None:intergenic	30.0%
	ATAGAAAGGAGAGAAAATGG+GGG	+	chr5_2:62196894-62196913	None:intergenic	35.0%
	GTTGTGGGGAATATATAGAA+AGG	+	chr5_2:62196908-62196927	None:intergenic	35.0%
	ATGATTATAATGAAGTGGGG+AGG	+	chr5_2:62196935-62196954	None:intergenic	35.0%
!!!	TTGTTTTTTGAAGGAGGTTG+GGG	+	chr5_2:62197025-62197044	None:intergenic	35.0%
!!!	CTTTGTTTTTTGAAGGAGGT+TGG	+	chr5_2:62197027-62197046	None:intergenic	35.0%
!!!	AGTGCTTTGTTTTTTGAAGG+AGG	+	chr5_2:62197031-62197050	None:intergenic	35.0%
!!	TTAAGGTATTGAGGATTTGG+TGG	+	chr5_2:62197154-62197173	None:intergenic	35.0%
	ATTGAAAGTAGAAGGAGAAG+AGG	+	chr5_2:62197200-62197219	None:intergenic	35.0%
	TCAATCCTCAAAAACCTTCT+TGG	-	chr5_2:62197215-62197234	Msa0780470:three_prime_UTR	35.0%
!	TCATTCCAAGAAGGTTTTTG+AGG	+	chr5_2:62197223-62197242	None:intergenic	35.0%
	ATCTGGTCCAATTACAACTT+TGG	-	chr5_2:62197283-62197302	Msa0780470:three_prime_UTR	35.0%
	TTTACCACTCACACTTGAAA+CGG	+	chr5_2:62197592-62197611	None:intergenic	35.0%
	ATGGAAAGAGATTGTTCAAG+AGG	-	chr5_2:62197648-62197667	Msa0780470:CDS	35.0%
	ATTGGCACTTGCAAAACAAT+TGG	-	chr5_2:62197875-62197894	Msa0780470:intron	35.0%
	TTGGCACTTGCAAAACAATT+GGG	-	chr5_2:62197876-62197895	Msa0780470:intron	35.0%
!	GAGATGCATGTTTTCATGTT+TGG	-	chr5_2:62198097-62198116	Msa0780470:CDS	35.0%
	TTTCATGTTTGGTATCACGT+TGG	-	chr5_2:62198108-62198127	Msa0780470:CDS	35.0%
	CATTTGCATGTAGAATTGTG+GGG	+	chr5_2:62198378-62198397	None:intergenic	35.0%
	GTCATTTGCATGTAGAATTG+TGG	+	chr5_2:62198380-62198399	None:intergenic	35.0%
	GTACAAGTTAAGATCTAGGA+CGG	+	chr5_2:62198574-62198593	None:intergenic	35.0%
!!	GTCCTAGATCTTAACTTGTA+CGG	-	chr5_2:62198573-62198592	Msa0780470:intron	35.0%
	ATCCGTACAAGTTAAGATCT+AGG	+	chr5_2:62198578-62198597	None:intergenic	35.0%
!!	TGGCTTAATTGCTTTAGGAT+TGG	-	chr5_2:62198925-62198944	Msa0780470:exon	35.0%
	CAATTGCTGGGACTAATTAT+GGG	-	chr5_2:62199015-62199034	Msa0780470:five_prime_UTR	35.0%
!!!	TTGGTTGGGTGAGAATTTTT+TGG	-	chr5_2:62199038-62199057	Msa0780470:five_prime_UTR	35.0%
	ATTGGAAGGCTAAATCAATG+GGG	+	chr5_2:62199151-62199170	None:intergenic	35.0%
	ATAGAAAGGAGAGAAAATGG+GGG	+	chr5_2:62196894-62196913	None:intergenic	35.0%
	GTTGTGGGGAATATATAGAA+AGG	+	chr5_2:62196908-62196927	None:intergenic	35.0%
	ATGATTATAATGAAGTGGGG+AGG	+	chr5_2:62196935-62196954	None:intergenic	35.0%
!!!	TTGTTTTTTGAAGGAGGTTG+GGG	+	chr5_2:62197025-62197044	None:intergenic	35.0%
!!!	CTTTGTTTTTTGAAGGAGGT+TGG	+	chr5_2:62197027-62197046	None:intergenic	35.0%
!!!	AGTGCTTTGTTTTTTGAAGG+AGG	+	chr5_2:62197031-62197050	None:intergenic	35.0%
!!	TTAAGGTATTGAGGATTTGG+TGG	+	chr5_2:62197154-62197173	None:intergenic	35.0%
	ATTGAAAGTAGAAGGAGAAG+AGG	+	chr5_2:62197200-62197219	None:intergenic	35.0%
	TCAATCCTCAAAAACCTTCT+TGG	-	chr5_2:62197215-62197234	Msa0780470:three_prime_UTR	35.0%
!	TCATTCCAAGAAGGTTTTTG+AGG	+	chr5_2:62197223-62197242	None:intergenic	35.0%
	ATCTGGTCCAATTACAACTT+TGG	-	chr5_2:62197283-62197302	Msa0780470:three_prime_UTR	35.0%
	TTTACCACTCACACTTGAAA+CGG	+	chr5_2:62197592-62197611	None:intergenic	35.0%
	ATGGAAAGAGATTGTTCAAG+AGG	-	chr5_2:62197648-62197667	Msa0780470:CDS	35.0%
	ATTGGCACTTGCAAAACAAT+TGG	-	chr5_2:62197875-62197894	Msa0780470:intron	35.0%
	TTGGCACTTGCAAAACAATT+GGG	-	chr5_2:62197876-62197895	Msa0780470:intron	35.0%
!	GAGATGCATGTTTTCATGTT+TGG	-	chr5_2:62198097-62198116	Msa0780470:CDS	35.0%
	TTTCATGTTTGGTATCACGT+TGG	-	chr5_2:62198108-62198127	Msa0780470:CDS	35.0%
	CATTTGCATGTAGAATTGTG+GGG	+	chr5_2:62198378-62198397	None:intergenic	35.0%
	GTCATTTGCATGTAGAATTG+TGG	+	chr5_2:62198380-62198399	None:intergenic	35.0%
	GTACAAGTTAAGATCTAGGA+CGG	+	chr5_2:62198574-62198593	None:intergenic	35.0%
!!	GTCCTAGATCTTAACTTGTA+CGG	-	chr5_2:62198573-62198592	Msa0780470:intron	35.0%
	ATCCGTACAAGTTAAGATCT+AGG	+	chr5_2:62198578-62198597	None:intergenic	35.0%
!!	TGGCTTAATTGCTTTAGGAT+TGG	-	chr5_2:62198925-62198944	Msa0780470:exon	35.0%
	CAATTGCTGGGACTAATTAT+GGG	-	chr5_2:62199015-62199034	Msa0780470:five_prime_UTR	35.0%
!!!	TTGGTTGGGTGAGAATTTTT+TGG	-	chr5_2:62199038-62199057	Msa0780470:five_prime_UTR	35.0%
	ATTGGAAGGCTAAATCAATG+GGG	+	chr5_2:62199151-62199170	None:intergenic	35.0%
	TAGAAAGGAGAGAAAATGGG+GGG	+	chr5_2:62196893-62196912	None:intergenic	40.0%
	AGAGAGAGAGAGATTATGGA+TGG	+	chr5_2:62196958-62196977	None:intergenic	40.0%
	AGAGAGAGAGAGAGAGATTA+TGG	+	chr5_2:62196962-62196981	None:intergenic	40.0%
!!!	TGTTTTTTGAAGGAGGTTGG+GGG	+	chr5_2:62197024-62197043	None:intergenic	40.0%
	TTTGAGGGAAGCTCAAACTT+AGG	+	chr5_2:62197129-62197148	None:intergenic	40.0%
!!!	GAGGATTTGGTGGATTTTGA+GGG	+	chr5_2:62197144-62197163	None:intergenic	40.0%
!!!	TGAGGATTTGGTGGATTTTG+AGG	+	chr5_2:62197145-62197164	None:intergenic	40.0%
	ATCCTTCCATTCTCTAGATC+TGG	-	chr5_2:62197266-62197285	Msa0780470:three_prime_UTR	40.0%
	ATTGGACCAGATCTAGAGAA+TGG	+	chr5_2:62197275-62197294	None:intergenic	40.0%
	TTTACATGCAGATCGGGATT+CGG	-	chr5_2:62197455-62197474	Msa0780470:CDS	40.0%
	AGACATGCAGAATCGAAGAA+CGG	-	chr5_2:62197478-62197497	Msa0780470:CDS	40.0%
	AGAAGCGAAAGAGAAGTTAC+AGG	-	chr5_2:62197612-62197631	Msa0780470:CDS	40.0%
	TACAGGTGAAGATCTTGACA+TGG	-	chr5_2:62197629-62197648	Msa0780470:CDS	40.0%
	AAGAAGACGCTGAAACTTCA+AGG	-	chr5_2:62197682-62197701	Msa0780470:CDS	40.0%
!	GTGCTAGACAAGTTGAAGTT+TGG	-	chr5_2:62197904-62197923	Msa0780470:intron	40.0%
	GGTTTCAAAATCGTAGAGCA+AGG	-	chr5_2:62197925-62197944	Msa0780470:intron	40.0%
	TCAAAGGTCCTATGTTGGAT+AGG	+	chr5_2:62198545-62198564	None:intergenic	40.0%
	GTGTATCAAAGGTCCTATGT+TGG	+	chr5_2:62198550-62198569	None:intergenic	40.0%
!	TTGACCCCATTGTCTTCTTT+TGG	-	chr5_2:62198743-62198762	Msa0780470:intron	40.0%
	TTTGAAGATACGGCAATTGC+TGG	-	chr5_2:62199002-62199021	Msa0780470:five_prime_UTR	40.0%
	TTGAAGATACGGCAATTGCT+GGG	-	chr5_2:62199003-62199022	Msa0780470:five_prime_UTR	40.0%
	GCAATTGCTGGGACTAATTA+TGG	-	chr5_2:62199014-62199033	Msa0780470:five_prime_UTR	40.0%
!!	GGACTAATTATGGGTTGGTT+GGG	-	chr5_2:62199024-62199043	Msa0780470:five_prime_UTR	40.0%
!!!	GTTGGGTGAGAATTTTTTGG+TGG	-	chr5_2:62199041-62199060	Msa0780470:five_prime_UTR	40.0%
	TCAAGAATTTAGGGGCCTTA+TGG	-	chr5_2:62199123-62199142	Msa0780470:five_prime_UTR	40.0%
!	CAAGAATTTAGGGGCCTTAT+GGG	-	chr5_2:62199124-62199143	Msa0780470:five_prime_UTR	40.0%
	TAAATCAATGGGGACCCATA+AGG	+	chr5_2:62199141-62199160	None:intergenic	40.0%
	TAGAAAGGAGAGAAAATGGG+GGG	+	chr5_2:62196893-62196912	None:intergenic	40.0%
	AGAGAGAGAGAGATTATGGA+TGG	+	chr5_2:62196958-62196977	None:intergenic	40.0%
	AGAGAGAGAGAGAGAGATTA+TGG	+	chr5_2:62196962-62196981	None:intergenic	40.0%
!!!	TGTTTTTTGAAGGAGGTTGG+GGG	+	chr5_2:62197024-62197043	None:intergenic	40.0%
	TTTGAGGGAAGCTCAAACTT+AGG	+	chr5_2:62197129-62197148	None:intergenic	40.0%
!!!	GAGGATTTGGTGGATTTTGA+GGG	+	chr5_2:62197144-62197163	None:intergenic	40.0%
!!!	TGAGGATTTGGTGGATTTTG+AGG	+	chr5_2:62197145-62197164	None:intergenic	40.0%
	ATCCTTCCATTCTCTAGATC+TGG	-	chr5_2:62197266-62197285	Msa0780470:three_prime_UTR	40.0%
	ATTGGACCAGATCTAGAGAA+TGG	+	chr5_2:62197275-62197294	None:intergenic	40.0%
	TTTACATGCAGATCGGGATT+CGG	-	chr5_2:62197455-62197474	Msa0780470:CDS	40.0%
	AGACATGCAGAATCGAAGAA+CGG	-	chr5_2:62197478-62197497	Msa0780470:CDS	40.0%
	AGAAGCGAAAGAGAAGTTAC+AGG	-	chr5_2:62197612-62197631	Msa0780470:CDS	40.0%
	TACAGGTGAAGATCTTGACA+TGG	-	chr5_2:62197629-62197648	Msa0780470:CDS	40.0%
	AAGAAGACGCTGAAACTTCA+AGG	-	chr5_2:62197682-62197701	Msa0780470:CDS	40.0%
!	GTGCTAGACAAGTTGAAGTT+TGG	-	chr5_2:62197904-62197923	Msa0780470:intron	40.0%
	GGTTTCAAAATCGTAGAGCA+AGG	-	chr5_2:62197925-62197944	Msa0780470:intron	40.0%
	TCAAAGGTCCTATGTTGGAT+AGG	+	chr5_2:62198545-62198564	None:intergenic	40.0%
	GTGTATCAAAGGTCCTATGT+TGG	+	chr5_2:62198550-62198569	None:intergenic	40.0%
!	TTGACCCCATTGTCTTCTTT+TGG	-	chr5_2:62198743-62198762	Msa0780470:intron	40.0%
	TTTGAAGATACGGCAATTGC+TGG	-	chr5_2:62199002-62199021	Msa0780470:five_prime_UTR	40.0%
	TTGAAGATACGGCAATTGCT+GGG	-	chr5_2:62199003-62199022	Msa0780470:five_prime_UTR	40.0%
	GCAATTGCTGGGACTAATTA+TGG	-	chr5_2:62199014-62199033	Msa0780470:five_prime_UTR	40.0%
!!	GGACTAATTATGGGTTGGTT+GGG	-	chr5_2:62199024-62199043	Msa0780470:five_prime_UTR	40.0%
!!!	GTTGGGTGAGAATTTTTTGG+TGG	-	chr5_2:62199041-62199060	Msa0780470:five_prime_UTR	40.0%
	TCAAGAATTTAGGGGCCTTA+TGG	-	chr5_2:62199123-62199142	Msa0780470:five_prime_UTR	40.0%
!	CAAGAATTTAGGGGCCTTAT+GGG	-	chr5_2:62199124-62199143	Msa0780470:five_prime_UTR	40.0%
	TAAATCAATGGGGACCCATA+AGG	+	chr5_2:62199141-62199160	None:intergenic	40.0%
	TATAATGAAGTGGGGAGGCA+GGG	+	chr5_2:62196930-62196949	None:intergenic	45.0%
	TTATAATGAAGTGGGGAGGC+AGG	+	chr5_2:62196931-62196950	None:intergenic	45.0%
	GACCAGATCTAGAGAATGGA+AGG	+	chr5_2:62197271-62197290	None:intergenic	45.0%
	TCGATTCCTCGGAGAAGTAA+AGG	+	chr5_2:62197504-62197523	None:intergenic	45.0%
	TCCGAGGAATCGATGTGAAT+CGG	-	chr5_2:62197511-62197530	Msa0780470:CDS	45.0%
!!	ACCGATTCACATCGATTCCT+CGG	+	chr5_2:62197515-62197534	None:intergenic	45.0%
	GATGTGAATCGGTTACCTTC+TGG	-	chr5_2:62197522-62197541	Msa0780470:CDS	45.0%
	TCTTCACAATCAGCACCAGA+AGG	+	chr5_2:62197540-62197559	None:intergenic	45.0%
	GCTGATTGTGAAGAAGAAGC+AGG	-	chr5_2:62197546-62197565	Msa0780470:CDS	45.0%
!!	ACACTTGAAACGGTGCTGTT+TGG	+	chr5_2:62197582-62197601	None:intergenic	45.0%
	CACATGGTAAGAGTTGTTGG+TGG	+	chr5_2:62198404-62198423	None:intergenic	45.0%
!	TCTAGGACGGAGTGTATCAA+AGG	+	chr5_2:62198561-62198580	None:intergenic	45.0%
	TGCTGGGACTAATTATGGGT+TGG	-	chr5_2:62199019-62199038	Msa0780470:five_prime_UTR	45.0%
!!	GGGACTAATTATGGGTTGGT+TGG	-	chr5_2:62199023-62199042	Msa0780470:five_prime_UTR	45.0%
	TATAATGAAGTGGGGAGGCA+GGG	+	chr5_2:62196930-62196949	None:intergenic	45.0%
	TTATAATGAAGTGGGGAGGC+AGG	+	chr5_2:62196931-62196950	None:intergenic	45.0%
	GACCAGATCTAGAGAATGGA+AGG	+	chr5_2:62197271-62197290	None:intergenic	45.0%
	TCGATTCCTCGGAGAAGTAA+AGG	+	chr5_2:62197504-62197523	None:intergenic	45.0%
	TCCGAGGAATCGATGTGAAT+CGG	-	chr5_2:62197511-62197530	Msa0780470:CDS	45.0%
!!	ACCGATTCACATCGATTCCT+CGG	+	chr5_2:62197515-62197534	None:intergenic	45.0%
	GATGTGAATCGGTTACCTTC+TGG	-	chr5_2:62197522-62197541	Msa0780470:CDS	45.0%
	TCTTCACAATCAGCACCAGA+AGG	+	chr5_2:62197540-62197559	None:intergenic	45.0%
	GCTGATTGTGAAGAAGAAGC+AGG	-	chr5_2:62197546-62197565	Msa0780470:CDS	45.0%
!!	ACACTTGAAACGGTGCTGTT+TGG	+	chr5_2:62197582-62197601	None:intergenic	45.0%
	CACATGGTAAGAGTTGTTGG+TGG	+	chr5_2:62198404-62198423	None:intergenic	45.0%
!	TCTAGGACGGAGTGTATCAA+AGG	+	chr5_2:62198561-62198580	None:intergenic	45.0%
	TGCTGGGACTAATTATGGGT+TGG	-	chr5_2:62199019-62199038	Msa0780470:five_prime_UTR	45.0%
!!	GGGACTAATTATGGGTTGGT+TGG	-	chr5_2:62199023-62199042	Msa0780470:five_prime_UTR	45.0%
	AGAGAAAATGGGGGGTAGTG+GGG	+	chr5_2:62196885-62196904	None:intergenic	50.0%
	GAGAGAAAATGGGGGGTAGT+GGG	+	chr5_2:62196886-62196905	None:intergenic	50.0%
!	AGCACCGTTTCAAGTGTGAG+TGG	-	chr5_2:62197585-62197604	Msa0780470:CDS	50.0%
	AGAGATATCCGGTGCATGTC+TGG	-	chr5_2:62197997-62198016	Msa0780470:intron	50.0%
	CTGTGATACCAGACATGCAC+CGG	+	chr5_2:62198008-62198027	None:intergenic	50.0%
	GGGCACATGGTAAGAGTTGT+TGG	+	chr5_2:62198407-62198426	None:intergenic	50.0%
	ACAGCAACACGCTCACAAGA+GGG	+	chr5_2:62198428-62198447	None:intergenic	50.0%
	AACAGCAACACGCTCACAAG+AGG	+	chr5_2:62198429-62198448	None:intergenic	50.0%
	GGAAATGGACGTGGGTGATT+TGG	+	chr5_2:62198497-62198516	None:intergenic	50.0%
	TCCATTTCCTGTGGGACCAT+GGG	-	chr5_2:62198508-62198527	Msa0780470:CDS	50.0%
	ATGTTGGATAGGAGCAGCTG+TGG	+	chr5_2:62198534-62198553	None:intergenic	50.0%
	CAGCTGCTCCTATCCAACAT+AGG	-	chr5_2:62198534-62198553	Msa0780470:CDS	50.0%
	AGAGAAAATGGGGGGTAGTG+GGG	+	chr5_2:62196885-62196904	None:intergenic	50.0%
	GAGAGAAAATGGGGGGTAGT+GGG	+	chr5_2:62196886-62196905	None:intergenic	50.0%
!	AGCACCGTTTCAAGTGTGAG+TGG	-	chr5_2:62197585-62197604	Msa0780470:CDS	50.0%
	AGAGATATCCGGTGCATGTC+TGG	-	chr5_2:62197997-62198016	Msa0780470:intron	50.0%
	CTGTGATACCAGACATGCAC+CGG	+	chr5_2:62198008-62198027	None:intergenic	50.0%
	GGGCACATGGTAAGAGTTGT+TGG	+	chr5_2:62198407-62198426	None:intergenic	50.0%
	ACAGCAACACGCTCACAAGA+GGG	+	chr5_2:62198428-62198447	None:intergenic	50.0%
	AACAGCAACACGCTCACAAG+AGG	+	chr5_2:62198429-62198448	None:intergenic	50.0%
	GGAAATGGACGTGGGTGATT+TGG	+	chr5_2:62198497-62198516	None:intergenic	50.0%
	TCCATTTCCTGTGGGACCAT+GGG	-	chr5_2:62198508-62198527	Msa0780470:CDS	50.0%
	ATGTTGGATAGGAGCAGCTG+TGG	+	chr5_2:62198534-62198553	None:intergenic	50.0%
	CAGCTGCTCCTATCCAACAT+AGG	-	chr5_2:62198534-62198553	Msa0780470:CDS	50.0%
	GGAGAGAAAATGGGGGGTAG+TGG	+	chr5_2:62196887-62196906	None:intergenic	55.0%
	TTTGAAGGAGGTTGGGGGAG+AGG	+	chr5_2:62197019-62197038	None:intergenic	55.0%
	GAACGGCCTTTACTTCTCCG+AGG	-	chr5_2:62197495-62197514	Msa0780470:CDS	55.0%
	CAGCAACACGCTCACAAGAG+GGG	+	chr5_2:62198427-62198446	None:intergenic	55.0%
	GCAGCATCAACGGCAGATGA+TGG	+	chr5_2:62198452-62198471	None:intergenic	55.0%
!	CGTGGGTGATTTGGAGCCAT+AGG	+	chr5_2:62198488-62198507	None:intergenic	55.0%
	TCACCCACGTCCATTTCCTG+TGG	-	chr5_2:62198499-62198518	Msa0780470:CDS	55.0%
	CACCCACGTCCATTTCCTGT+GGG	-	chr5_2:62198500-62198519	Msa0780470:CDS	55.0%
	GTCCCACAGGAAATGGACGT+GGG	+	chr5_2:62198505-62198524	None:intergenic	55.0%
	GTCCATTTCCTGTGGGACCA+TGG	-	chr5_2:62198507-62198526	Msa0780470:CDS	55.0%
	GGAGAGAAAATGGGGGGTAG+TGG	+	chr5_2:62196887-62196906	None:intergenic	55.0%
	TTTGAAGGAGGTTGGGGGAG+AGG	+	chr5_2:62197019-62197038	None:intergenic	55.0%
	GAACGGCCTTTACTTCTCCG+AGG	-	chr5_2:62197495-62197514	Msa0780470:CDS	55.0%
	CAGCAACACGCTCACAAGAG+GGG	+	chr5_2:62198427-62198446	None:intergenic	55.0%
	GCAGCATCAACGGCAGATGA+TGG	+	chr5_2:62198452-62198471	None:intergenic	55.0%
!	CGTGGGTGATTTGGAGCCAT+AGG	+	chr5_2:62198488-62198507	None:intergenic	55.0%
	TCACCCACGTCCATTTCCTG+TGG	-	chr5_2:62198499-62198518	Msa0780470:CDS	55.0%
	CACCCACGTCCATTTCCTGT+GGG	-	chr5_2:62198500-62198519	Msa0780470:CDS	55.0%
	GTCCCACAGGAAATGGACGT+GGG	+	chr5_2:62198505-62198524	None:intergenic	55.0%
	GTCCATTTCCTGTGGGACCA+TGG	-	chr5_2:62198507-62198526	Msa0780470:CDS	55.0%
!!	AAATGGGGGGTAGTGGGGAG+TGG	+	chr5_2:62196880-62196899	None:intergenic	60.0%
	AAGTGGGGAGGCAGGGTTGT+GGG	+	chr5_2:62196923-62196942	None:intergenic	60.0%
!	ACGCTCACAAGAGGGGCACA+TGG	+	chr5_2:62198420-62198439	None:intergenic	60.0%
	ACGACGCGTGGCAGCATCAA+CGG	+	chr5_2:62198462-62198481	None:intergenic	60.0%
	TGCCACGCGTCGTCATCCTA+TGG	-	chr5_2:62198469-62198488	Msa0780470:CDS	60.0%
	AGCCATAGGATGACGACGCG+TGG	+	chr5_2:62198474-62198493	None:intergenic	60.0%
	GGTCCCACAGGAAATGGACG+TGG	+	chr5_2:62198506-62198525	None:intergenic	60.0%
	GCCCATGGTCCCACAGGAAA+TGG	+	chr5_2:62198512-62198531	None:intergenic	60.0%
	ATAGGAGCAGCTGTGGCCCA+TGG	+	chr5_2:62198527-62198546	None:intergenic	60.0%
!!	AAATGGGGGGTAGTGGGGAG+TGG	+	chr5_2:62196880-62196899	None:intergenic	60.0%
	AAGTGGGGAGGCAGGGTTGT+GGG	+	chr5_2:62196923-62196942	None:intergenic	60.0%
!	ACGCTCACAAGAGGGGCACA+TGG	+	chr5_2:62198420-62198439	None:intergenic	60.0%
	ACGACGCGTGGCAGCATCAA+CGG	+	chr5_2:62198462-62198481	None:intergenic	60.0%
	TGCCACGCGTCGTCATCCTA+TGG	-	chr5_2:62198469-62198488	Msa0780470:CDS	60.0%
	AGCCATAGGATGACGACGCG+TGG	+	chr5_2:62198474-62198493	None:intergenic	60.0%
	GGTCCCACAGGAAATGGACG+TGG	+	chr5_2:62198506-62198525	None:intergenic	60.0%
	GCCCATGGTCCCACAGGAAA+TGG	+	chr5_2:62198512-62198531	None:intergenic	60.0%
	ATAGGAGCAGCTGTGGCCCA+TGG	+	chr5_2:62198527-62198546	None:intergenic	60.0%
	AGTGGGGAGGCAGGGTTGTG+GGG	+	chr5_2:62196922-62196941	None:intergenic	65.0%
	GAAGTGGGGAGGCAGGGTTG+TGG	+	chr5_2:62196924-62196943	None:intergenic	65.0%
	AGTGGGGAGGCAGGGTTGTG+GGG	+	chr5_2:62196922-62196941	None:intergenic	65.0%
	GAAGTGGGGAGGCAGGGTTG+TGG	+	chr5_2:62196924-62196943	None:intergenic	65.0%
	GCTGTGGCCCATGGTCCCAC+AGG	+	chr5_2:62198518-62198537	None:intergenic	70.0%
	GCTGTGGCCCATGGTCCCAC+AGG	+	chr5_2:62198518-62198537	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	62196843	62199185	62196843	ID=Msa0780470;Name=Msa0780470
chr5_2	mRNA	62196843	62199185	62196843	ID=Msa0780470-mRNA-1;Parent=Msa0780470;Name=Msa0780470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=251\|1\|1\|1\|1\|1\|4\|599\|296
chr5_2	exon	62196843	62197772	62196843	ID=Msa0780470-mRNA-1:exon:18458;Parent=Msa0780470-mRNA-1
chr5_2	exon	62198082	62198161	62198082	ID=Msa0780470-mRNA-1:exon:18457;Parent=Msa0780470-mRNA-1
chr5_2	exon	62198249	62198562	62198249	ID=Msa0780470-mRNA-1:exon:18456;Parent=Msa0780470-mRNA-1
chr5_2	exon	62198769	62199185	62198769	ID=Msa0780470-mRNA-1:exon:18455;Parent=Msa0780470-mRNA-1
chr5_2	five_prime_UTR	62198935	62199185	62198935	ID=Msa0780470-mRNA-1:five_prime_utr;Parent=Msa0780470-mRNA-1
chr5_2	CDS	62198769	62198934	62198769	ID=Msa0780470-mRNA-1:cds;Parent=Msa0780470-mRNA-1
chr5_2	CDS	62198249	62198562	62198249	ID=Msa0780470-mRNA-1:cds;Parent=Msa0780470-mRNA-1
chr5_2	CDS	62198082	62198161	62198082	ID=Msa0780470-mRNA-1:cds;Parent=Msa0780470-mRNA-1
chr5_2	CDS	62197442	62197772	62197442	ID=Msa0780470-mRNA-1:cds;Parent=Msa0780470-mRNA-1
chr5_2	three_prime_UTR	62196843	62197441	62196843	ID=Msa0780470-mRNA-1:three_prime_utr;Parent=Msa0780470-mRNA-1

Gene Sequence

>Msa0780470

ATGAGTATTGAAAAGGAAGATTTTGGTTTGAGCCTAAGTTTGAGCTTCCCTCAAAATCCACCAAATCCTCAATACCTTAATCTTATGTCTTCTTCAACTCATTCCTCTTCTCCTTCTACTTTCAATCCTCAAAAACCTTCTTGGAATGATGTTTTTACTTCTTCAGATCGGGATTCGGAGACATGCAGAATCGAAGAACGGCCTTTACTTCTCCGAGGAATCGATGTGAATCGGTTACCTTCTGGTGCTGATTGTGAAGAAGAAGCAGGAGTTTCATCACCAAACAGCACCGTTTCAAGTGTGAGTGGTAAAAGAAGCGAAAGAGAAGTTACAGGTGAAGATCTTGACATGGAAAGAGATTGTTCAAGAGGAATCAGTGATGAAGAAGACGCTGAAACTTCAAGGAAAAAACTTAGACTCACCAAAGACCAATCAATTATTCTAGAAGAGAGTTTCAAAGAACACAACACTCTTAACCCCAAACAAAAATTGGCACTTGCAAAACAATTGGGACTTCGTGCTAGACAAGTTGAAGTTTGGTTTCAAAATCGTAGAGCAAGGACTAAGTTGAAGCAAACAGAAGTAGACTGTGAGTTTTTGAAAAGATGTTGTGAGAATCTAACGGATGAAAATAGACGGTTACAAAAGGAAGTGCAAGAGTTAAGAGCATTGAAACTTTCCCCACAATTCTACATGCAAATGACACCACCAACAACTCTTACCATGTGCCCCTCTTGTGAGCGTGTTGCTGTTCCATCATCTGCCGTTGATGCTGCCACGCGTCGTCATCCTATGGCTCCAAATCACCCACGTCCATTTCCTGTGGGACCATGGGCCACAGCTGCTCCTATCCAACATAGGACCTTTGATACACTCCGTCCTAGATCTTAA

Protein sequence

>Msa0780470

MSIEKEDFGLSLSLSFPQNPPNPQYLNLMSSSTHSSSPSTFNPQKPSWNDVFTSSDRDSETCRIEERPLLLRGIDVNRLPSGADCEEEAGVSSPNSTVSSVSGKRSEREVTGEDLDMERDCSRGISDEEDAETSRKKLRLTKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSSAVDAATRRHPMAPNHPRPFPVGPWATAAPIQHRTFDTLRPRS*