Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092450 | XP_003601125.1 | 100.000 | 125 | 0 | 0 | 1 | 125 | 1 | 125 | 7.81e-83 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092450 | sp|Q54T60|TMM50_DICDI | 30.081 | 123 | 71 | 3 | 12 | 119 | 10 | 132 | 2.87e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092450 | B7FGM3 | 100.000 | 125 | 0 | 0 | 1 | 125 | 1 | 125 | 3.73e-83 | 249 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa0092450 | 0.802931 | 4.439607e-49 | -8.615850e-47 |
| Msa0068020 | Msa0092450 | 0.800726 | 1.258832e-48 | -8.615850e-47 |
| Msa0092450 | Msa0417660 | 0.829800 | 4.204091e-55 | -8.615850e-47 |
| Msa0092450 | Msa0588260 | 0.826689 | 2.363955e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092450 | MtrunA17_Chr3g0115201 | 100.000 | 125 | 0 | 0 | 1 | 125 | 1 | 125 | 7.18e-87 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092450 | AT1G36980.1 | 83.200 | 125 | 21 | 0 | 1 | 125 | 1 | 125 | 4.46e-74 | 217 |
| Msa0092450 | AT1G36980.2 | 83.200 | 125 | 21 | 0 | 1 | 125 | 1 | 125 | 4.46e-74 | 217 |
Find 41 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGGACTTAATCGAATTA+TGG | 0.237793 | 1_2:+74904283 | Msa0092450:exon |
| GTGTCCTTTGTTTCTTTAGC+TGG | 0.292476 | 1_2:+74907699 | Msa0092450:CDS |
| CCATTTCTTCACTACCTTCC+TGG | 0.294772 | 1_2:+74904396 | Msa0092450:CDS |
| TCGGTGCCGGCTGGTGGATC+TGG | 0.314660 | 1_2:+74904340 | Msa0092450:CDS |
| GTGTAACGGAGAACCGAAAA+TGG | 0.315182 | 1_2:+74904266 | Msa0092450:exon |
| TGAGTACAACGTTTCCTCTT+TGG | 0.345709 | 1_2:-74908657 | None:intergenic |
| AAGATTTGTCAAGTGAATCT+TGG | 0.381108 | 1_2:-74907740 | None:intergenic |
| AATGGACTTAATCGAATTAT+GGG | 0.397303 | 1_2:+74904284 | Msa0092450:exon |
| CCAGGAAGGTAGTGAAGAAA+TGG | 0.405204 | 1_2:-74904396 | None:intergenic |
| GATTATTCTCCTTATGATGA+AGG | 0.411873 | 1_2:+74904568 | Msa0092450:CDS |
| TCAGTGTGGACTGGAATTGC+AGG | 0.434993 | 1_2:+74907768 | Msa0092450:CDS |
| CTCCACTCCCCTTCATCATA+AGG | 0.448612 | 1_2:-74904577 | None:intergenic |
| AATGTGTATTTGTCTTGATC+AGG | 0.469326 | 1_2:+74907799 | Msa0092450:CDS |
| GTTTCTTTAGCTGGATCAGC+GGG | 0.479953 | 1_2:+74907708 | Msa0092450:CDS |
| CAATTCCAGTCCACACTGAT+GGG | 0.488024 | 1_2:-74907764 | None:intergenic |
| AAAACTGCTCCGGCGACGCC+AGG | 0.490397 | 1_2:-74904318 | None:intergenic |
| CGTAAACCCAACAACAGAAA+AGG | 0.490546 | 1_2:-74904244 | None:intergenic |
| ATTATTCTCCTTATGATGAA+GGG | 0.506748 | 1_2:+74904569 | Msa0092450:CDS |
| TCTCAAAGTAACACCAACAC+TGG | 0.515230 | 1_2:+74904207 | None:intergenic |
| GCAATTCCAGTCCACACTGA+TGG | 0.522479 | 1_2:-74907765 | None:intergenic |
| GTGAAGAAATGGAACGGTGG+TGG | 0.524494 | 1_2:-74904385 | None:intergenic |
| GTTGTTGGGTTTACGTGTAA+CGG | 0.540400 | 1_2:+74904252 | Msa0092450:five_prime_UTR |
| CTCCTTATGATGAAGGGGAG+TGG | 0.556644 | 1_2:+74904575 | Msa0092450:CDS |
| TCTTCCCCATCAGTGTGGAC+TGG | 0.560606 | 1_2:+74907759 | Msa0092450:CDS |
| GCCGGCACCGAAAACTGCTC+CGG | 0.565156 | 1_2:-74904328 | None:intergenic |
| CTCAAAGTAACACCAACACT+GGG | 0.588307 | 1_2:+74904208 | None:intergenic |
| TTATTCTCCTTATGATGAAG+GGG | 0.589905 | 1_2:+74904570 | Msa0092450:CDS |
| GTCAAGCCAGATCCACCAGC+CGG | 0.610609 | 1_2:-74904346 | None:intergenic |
| TGTTTCTTTAGCTGGATCAG+CGG | 0.614958 | 1_2:+74907707 | Msa0092450:CDS |
| CTTATGATGAAGGGGAGTGG+AGG | 0.618994 | 1_2:+74904578 | Msa0092450:CDS |
| ACGTTGTACTCACTCGAAGT+TGG | 0.621038 | 1_2:+74908668 | Msa0092450:CDS |
| TTGAACTCAGCAAACCAAAG+AGG | 0.627225 | 1_2:+74908643 | Msa0092450:intron |
| AGATGTGAAACTGACCAGGA+AGG | 0.635158 | 1_2:-74904410 | None:intergenic |
| AATCTCGCGTATCCCAGTGT+TGG | 0.636730 | 1_2:-74904220 | None:intergenic |
| TGATCCAGCTAAAGAAACAA+AGG | 0.642275 | 1_2:-74907703 | None:intergenic |
| TTGTTAACAGACTGAAGCTG+TGG | 0.644695 | 1_2:+74907658 | Msa0092450:intron |
| ACAAATCTTCCCCATCAGTG+TGG | 0.656630 | 1_2:+74907754 | Msa0092450:CDS |
| AATTCCAGTCCACACTGATG+GGG | 0.663062 | 1_2:-74907763 | None:intergenic |
| AAGGTAGTGAAGAAATGGAA+CGG | 0.682128 | 1_2:-74904391 | None:intergenic |
| GTAGTGAAGAAATGGAACGG+TGG | 0.714297 | 1_2:-74904388 | None:intergenic |
| GGTGGTGGAGCTACATACGA+CGG | 0.768981 | 1_2:-74904370 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAGAATTTAAAATTCT+AGG | + | chr1_2:74905704-74905723 | Msa0092450:intron | 10.0% |
| !! | ATTCAAAACATATAAATAAA+AGG | - | chr1_2:74907128-74907147 | None:intergenic | 10.0% |
| !!! | TTTATTTATATGTTTTGAAT+TGG | + | chr1_2:74907128-74907147 | Msa0092450:intron | 10.0% |
| !!! | TTATTTATATGTTTTGAATT+GGG | + | chr1_2:74907129-74907148 | Msa0092450:intron | 10.0% |
| !! | TAAATATTTACTAATATGAT+TGG | - | chr1_2:74907948-74907967 | None:intergenic | 10.0% |
| !!! | TATTTTAGTTTTAGACTTTT+AGG | + | chr1_2:74904448-74904467 | Msa0092450:intron | 15.0% |
| !!! | AACTTAATTTTATCTTTTTC+TGG | - | chr1_2:74904758-74904777 | None:intergenic | 15.0% |
| !!! | ATTTAGTTGTTTTTAGATAA+AGG | + | chr1_2:74906270-74906289 | Msa0092450:intron | 15.0% |
| !!! | TATTTATATGTTTTGAATTG+GGG | + | chr1_2:74907130-74907149 | Msa0092450:intron | 15.0% |
| !!! | ATTTTTAATAGTTTTCAACA+CGG | - | chr1_2:74907909-74907928 | None:intergenic | 15.0% |
| !!! | ATTTCAAATAATGTTTCTTT+TGG | + | chr1_2:74908039-74908058 | Msa0092450:intron | 15.0% |
| !!! | TCATTTGATTTGTTAATTGT+TGG | + | chr1_2:74904620-74904639 | Msa0092450:intron | 20.0% |
| !!! | TTGTTATTGTGGTTTTTTTA+TGG | + | chr1_2:74906348-74906367 | Msa0092450:intron | 20.0% |
| !!! | AACTCTTACAATTTTATGAT+CGG | + | chr1_2:74906467-74906486 | Msa0092450:intron | 20.0% |
| !! | CTCAATAAGCAAAAAAAAAA+AGG | + | chr1_2:74906594-74906613 | Msa0092450:intron | 20.0% |
| !! | AATAAGCAAAAAAAAAAAGG+TGG | + | chr1_2:74906597-74906616 | Msa0092450:intron | 20.0% |
| !! | ATAAGCAAAAAAAAAAAGGT+GGG | + | chr1_2:74906598-74906617 | Msa0092450:intron | 20.0% |
| !! | ATTTCTTTAAATTTGTGAGT+GGG | - | chr1_2:74907029-74907048 | None:intergenic | 20.0% |
| !! | AATTTCTTTAAATTTGTGAG+TGG | - | chr1_2:74907030-74907049 | None:intergenic | 20.0% |
| !!! | ATTTATATGTTTTGAATTGG+GGG | + | chr1_2:74907131-74907150 | Msa0092450:intron | 20.0% |
| !! | TAAACTTTCAATTTGACATT+AGG | - | chr1_2:74908171-74908190 | None:intergenic | 20.0% |
| !! | TGTCAAATTGAAAGTTTAAA+AGG | + | chr1_2:74908173-74908192 | Msa0092450:intron | 20.0% |
| !! | AATTTGAAGATTGACATAAA+AGG | - | chr1_2:74908263-74908282 | None:intergenic | 20.0% |
| !!! | TTTTATGTCAATCTTCAAAT+TGG | + | chr1_2:74908262-74908281 | Msa0092450:intron | 20.0% |
| !! | AAAATAATCATCAAACAAGT+AGG | - | chr1_2:74908310-74908329 | None:intergenic | 20.0% |
| !! | ACCACATTAAATAAAGAAAA+TGG | - | chr1_2:74908454-74908473 | None:intergenic | 20.0% |
| !! | AATTCGATTAAGTCCATTTT+CGG | - | chr1_2:74904282-74904301 | None:intergenic | 25.0% |
| !! | AAATGGACTTAATCGAATTA+TGG | + | chr1_2:74904283-74904302 | Msa0092450:exon | 25.0% |
| !! | AATGGACTTAATCGAATTAT+GGG | + | chr1_2:74904284-74904303 | Msa0092450:exon | 25.0% |
| ! | ATTATTCTCCTTATGATGAA+GGG | + | chr1_2:74904569-74904588 | Msa0092450:CDS | 25.0% |
| ! | AATCAAATGAGCAATAAAGT+AGG | - | chr1_2:74904610-74904629 | None:intergenic | 25.0% |
| !! | ATGTTGTTTGACTTCAAAAT+CGG | + | chr1_2:74904663-74904682 | Msa0092450:intron | 25.0% |
| ! | TTGTCGTAACTCATAAATAT+AGG | - | chr1_2:74904698-74904717 | None:intergenic | 25.0% |
| ! | ATGAAAACAATTTCTGACAT+TGG | - | chr1_2:74904871-74904890 | None:intergenic | 25.0% |
| !!! | GCTTATTTTAGTTTATCTAC+TGG | - | chr1_2:74904929-74904948 | None:intergenic | 25.0% |
| ! | TTCAAAATAGTCACTTCTTA+GGG | - | chr1_2:74904965-74904984 | None:intergenic | 25.0% |
| ! | ATTCAAAATAGTCACTTCTT+AGG | - | chr1_2:74904966-74904985 | None:intergenic | 25.0% |
| ! | AAGACTGTTACATAAACAAA+AGG | - | chr1_2:74905920-74905939 | None:intergenic | 25.0% |
| !!! | TTTATTTTGGTCAAACAATG+TGG | + | chr1_2:74906210-74906229 | Msa0092450:intron | 25.0% |
| !!! | ACCAAAGAAGTATTTATTTG+AGG | + | chr1_2:74906740-74906759 | Msa0092450:intron | 25.0% |
| ! | TCCTCAAATAAATACTTCTT+TGG | - | chr1_2:74906744-74906763 | None:intergenic | 25.0% |
| ! | AAGTCTGACAAATTTACAAT+TGG | + | chr1_2:74907245-74907264 | Msa0092450:intron | 25.0% |
| ! | ACAAATTTACAATTGGTGTA+TGG | + | chr1_2:74907252-74907271 | Msa0092450:intron | 25.0% |
| ! | TTGACTATCTCAATTTAAGA+GGG | + | chr1_2:74907333-74907352 | Msa0092450:intron | 25.0% |
| ! | AAAATAGATTGGAAAATTGC+TGG | - | chr1_2:74907449-74907468 | None:intergenic | 25.0% |
| ! | AACTGGTCAAAAAAATAGAT+TGG | - | chr1_2:74907460-74907479 | None:intergenic | 25.0% |
| !!! | CTATTTTTTTGACCAGTTAT+TGG | + | chr1_2:74907462-74907481 | Msa0092450:intron | 25.0% |
| ! | CCTAGAAAATAAACATACAA+GGG | - | chr1_2:74907493-74907512 | None:intergenic | 25.0% |
| ! | ACCTAGAAAATAAACATACA+AGG | - | chr1_2:74907494-74907513 | None:intergenic | 25.0% |
| ! | TTCCTTCAATGATAAATTCA+AGG | - | chr1_2:74907886-74907905 | None:intergenic | 25.0% |
| ! | TGGATAACTTGAAATCATTA+TGG | + | chr1_2:74908059-74908078 | Msa0092450:intron | 25.0% |
| !!! | CAAGTTTTTGACTTAAATGA+TGG | - | chr1_2:74908224-74908243 | None:intergenic | 25.0% |
| !!! | GCCATTTTCTTTATTTAATG+TGG | + | chr1_2:74908450-74908469 | Msa0092450:intron | 25.0% |
| ! | AGATTACCTTTTCTGTTGTT+GGG | + | chr1_2:74904238-74904257 | Msa0092450:five_prime_UTR | 30.0% |
| !!! | CTTTTGATTGTTGTTTTCGA+AGG | + | chr1_2:74904490-74904509 | Msa0092450:intron | 30.0% |
| GATTATTCTCCTTATGATGA+AGG | + | chr1_2:74904568-74904587 | Msa0092450:CDS | 30.0% | |
| TTATTCTCCTTATGATGAAG+GGG | + | chr1_2:74904570-74904589 | Msa0092450:CDS | 30.0% | |
| AAATGAGCAATAAAGTAGGT+AGG | - | chr1_2:74904606-74904625 | None:intergenic | 30.0% | |
| CAACATCACAATAATCAACA+AGG | - | chr1_2:74904649-74904668 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCATAAGCTGTAT+TGG | + | chr1_2:74904802-74904821 | Msa0092450:intron | 30.0% |
| TTCTTAGGGAATGTTTGAAT+TGG | - | chr1_2:74904951-74904970 | None:intergenic | 30.0% | |
| GTGACTGTTTGACTAATTTA+CGG | - | chr1_2:74905095-74905114 | None:intergenic | 30.0% | |
| ATCAATGCTTACAAGTTTAC+TGG | + | chr1_2:74905148-74905167 | Msa0092450:intron | 30.0% | |
| GAATTTATTGGCAAATTCTC+TGG | - | chr1_2:74905184-74905203 | None:intergenic | 30.0% | |
| GAGATGTCAATGGAATTTAT+TGG | - | chr1_2:74905196-74905215 | None:intergenic | 30.0% | |
| ATTGATGCTAGTAAGTCTAT+AGG | + | chr1_2:74905223-74905242 | Msa0092450:intron | 30.0% | |
| !! | TAGGCATCATTTTTCTAACT+AGG | + | chr1_2:74905242-74905261 | Msa0092450:intron | 30.0% |
| ATACTGACATGTCAAAGATT+TGG | + | chr1_2:74905273-74905292 | Msa0092450:intron | 30.0% | |
| AAAATAATTCACTGAGGTAG+TGG | - | chr1_2:74905540-74905559 | None:intergenic | 30.0% | |
| AAGCACAAAATAATTCACTG+AGG | - | chr1_2:74905546-74905565 | None:intergenic | 30.0% | |
| TAGAGTAATTCTCTTAGAAG+CGG | + | chr1_2:74905622-74905641 | Msa0092450:intron | 30.0% | |
| GAGGAAATGTAATGTTATGA+GGG | - | chr1_2:74905755-74905774 | None:intergenic | 30.0% | |
| TGAGGAAATGTAATGTTATG+AGG | - | chr1_2:74905756-74905775 | None:intergenic | 30.0% | |
| ! | ATTGATGGAGCATTCAAAAT+AGG | - | chr1_2:74905952-74905971 | None:intergenic | 30.0% |
| ! | ATTTTGAATGCTCCATCAAT+TGG | + | chr1_2:74905952-74905971 | Msa0092450:intron | 30.0% |
| AACATTTGATTCATCTCTTG+TGG | - | chr1_2:74906155-74906174 | None:intergenic | 30.0% | |
| ACAAGAGATGAATCAAATGT+TGG | + | chr1_2:74906154-74906173 | Msa0092450:intron | 30.0% | |
| TTGTTTGACCAAAATAAACC+AGG | - | chr1_2:74906208-74906227 | None:intergenic | 30.0% | |
| ATAAAGGAAGTCTTTCTTTG+AGG | + | chr1_2:74906286-74906305 | Msa0092450:intron | 30.0% | |
| ! | CGAGTCTTAAATTGTTATTG+TGG | + | chr1_2:74906337-74906356 | Msa0092450:intron | 30.0% |
| ! | AATTTTATGATCGGAGTCTA+TGG | + | chr1_2:74906476-74906495 | Msa0092450:intron | 30.0% |
| AGTATTTATTTGAGGAGTTG+AGG | + | chr1_2:74906748-74906767 | Msa0092450:intron | 30.0% | |
| ! | ACTCATTTTACGCAATTTGA+GGG | - | chr1_2:74906800-74906819 | None:intergenic | 30.0% |
| ACTTGCATGAACAAATTACT+AGG | - | chr1_2:74906975-74906994 | None:intergenic | 30.0% | |
| CATGCAAATGATTTAACGAA+AGG | - | chr1_2:74907081-74907100 | None:intergenic | 30.0% | |
| CTTTCGTTAAATCATTTGCA+TGG | + | chr1_2:74907079-74907098 | Msa0092450:intron | 30.0% | |
| !! | GTCAAGTTGATAGATATATG+TGG | - | chr1_2:74907318-74907337 | None:intergenic | 30.0% |
| CTTGACTATCTCAATTTAAG+AGG | + | chr1_2:74907332-74907351 | Msa0092450:intron | 30.0% | |
| AAACCAGCAAATTCATAACA+TGG | - | chr1_2:74907419-74907438 | None:intergenic | 30.0% | |
| !! | TTTTTGACCAGTTATTGGTT+TGG | + | chr1_2:74907467-74907486 | Msa0092450:intron | 30.0% |
| !! | CCCTTGTATGTTTATTTTCT+AGG | + | chr1_2:74907490-74907509 | Msa0092450:intron | 30.0% |
| !! | TTAAGAAGCTTTGAACTAAG+GGG | - | chr1_2:74907581-74907600 | None:intergenic | 30.0% |
| !! | CTTAAGAAGCTTTGAACTAA+GGG | - | chr1_2:74907582-74907601 | None:intergenic | 30.0% |
| !! | TCTTAAGAAGCTTTGAACTA+AGG | - | chr1_2:74907583-74907602 | None:intergenic | 30.0% |
| AAAGCTTCTTAAGAATCACA+TGG | + | chr1_2:74907589-74907608 | Msa0092450:intron | 30.0% | |
| AGTCTGTTAACAAGAGTAAA+AGG | - | chr1_2:74907651-74907670 | None:intergenic | 30.0% | |
| AAGATTTGTCAAGTGAATCT+TGG | - | chr1_2:74907743-74907762 | None:intergenic | 30.0% | |
| AATGTGTATTTGTCTTGATC+AGG | + | chr1_2:74907799-74907818 | Msa0092450:CDS | 30.0% | |
| TAACAACTCAAGAGGAAAAT+CGG | - | chr1_2:74907853-74907872 | None:intergenic | 30.0% | |
| !! | ATTTTCCTCTTGAGTTGTTA+TGG | + | chr1_2:74907853-74907872 | Msa0092450:intron | 30.0% |
| ! | TTTTTCCATAACAACTCAAG+AGG | - | chr1_2:74907861-74907880 | None:intergenic | 30.0% |
| TGCCTTGAATTTATCATTGA+AGG | + | chr1_2:74907881-74907900 | Msa0092450:intron | 30.0% | |
| CAATTTGACATTAGGACATT+AGG | - | chr1_2:74908163-74908182 | None:intergenic | 30.0% | |
| TTAATGTGGTGATAAATAGC+TGG | + | chr1_2:74908464-74908483 | Msa0092450:intron | 30.0% | |
| ! | GAGATTACCTTTTCTGTTGT+TGG | + | chr1_2:74904237-74904256 | Msa0092450:five_prime_UTR | 35.0% |
| ! | ATCGAATTATGGGCGATTTT+CGG | + | chr1_2:74904294-74904313 | Msa0092450:CDS | 35.0% |
| AAGGTAGTGAAGAAATGGAA+CGG | - | chr1_2:74904394-74904413 | None:intergenic | 35.0% | |
| !! | GTTTTGTTGTGAGACTGTTT+GGG | - | chr1_2:74904901-74904920 | None:intergenic | 35.0% |
| !!! | AGTTTTGTTGTGAGACTGTT+TGG | - | chr1_2:74904902-74904921 | None:intergenic | 35.0% |
| TTGAATGAGAATTCTCATGC+AGG | - | chr1_2:74905041-74905060 | None:intergenic | 35.0% | |
| AATTTGAGGAGAGATGTCAA+TGG | - | chr1_2:74905206-74905225 | None:intergenic | 35.0% | |
| GACTTACTAGCATCAATTTG+AGG | - | chr1_2:74905220-74905239 | None:intergenic | 35.0% | |
| GAGATAGAGTGATAATTCCT+TGG | + | chr1_2:74905339-74905358 | Msa0092450:intron | 35.0% | |
| TCTGTGATAATTTGGTTGTG+TGG | - | chr1_2:74905491-74905510 | None:intergenic | 35.0% | |
| ! | CTTTTACATGATGTAAGCAG+TGG | + | chr1_2:74905563-74905582 | Msa0092450:intron | 35.0% |
| GGAATTGAACAAAGCGTATA+AGG | + | chr1_2:74905584-74905603 | Msa0092450:intron | 35.0% | |
| TGTGTTTGGATGAGGTAATT+TGG | + | chr1_2:74905677-74905696 | Msa0092450:intron | 35.0% | |
| GAGGGAATTCAAATACTTTG+AGG | - | chr1_2:74905737-74905756 | None:intergenic | 35.0% | |
| GGGAATGTAATGTAATGTTG+AGG | - | chr1_2:74905774-74905793 | None:intergenic | 35.0% | |
| TGAATTCCATTGTTTGGATG+GGG | - | chr1_2:74905795-74905814 | None:intergenic | 35.0% | |
| GTGAATTCCATTGTTTGGAT+GGG | - | chr1_2:74905796-74905815 | None:intergenic | 35.0% | |
| TTGAGGTGAATTCCATTGTT+TGG | - | chr1_2:74905801-74905820 | None:intergenic | 35.0% | |
| GAGGGAATTCAAATACTTTG+AGG | - | chr1_2:74905737-74905756 | None:intergenic | 35.0% | |
| GAGGGAATGTAATGTTATGA+GGG | - | chr1_2:74905836-74905855 | None:intergenic | 35.0% | |
| TGAGGGAATGTAATGTTATG+AGG | - | chr1_2:74905837-74905856 | None:intergenic | 35.0% | |
| !! | GTTATGAGGGAATGTTTTGA+GGG | - | chr1_2:74905854-74905873 | None:intergenic | 35.0% |
| ! | TGTTATGAGGGAATGTTTTG+AGG | - | chr1_2:74905855-74905874 | None:intergenic | 35.0% |
| GAGGGAATGTAATGTTATGA+GGG | - | chr1_2:74905836-74905855 | None:intergenic | 35.0% | |
| TGAGGGAATGTAATGTTATG+AGG | - | chr1_2:74905837-74905856 | None:intergenic | 35.0% | |
| !! | ACATTTTGACAGCATCAGAT+TGG | - | chr1_2:74905999-74906018 | None:intergenic | 35.0% |
| GTACGACTTATCATCAATAG+TGG | - | chr1_2:74906031-74906050 | None:intergenic | 35.0% | |
| ! | ATGTTTGGCCTGGTTTATTT+TGG | + | chr1_2:74906197-74906216 | Msa0092450:intron | 35.0% |
| ! | AGGGAGTTTTCATAAACTCA+TGG | - | chr1_2:74906507-74906526 | None:intergenic | 35.0% |
| AACTCCCTAGTTTGACAATT+TGG | + | chr1_2:74906519-74906538 | Msa0092450:intron | 35.0% | |
| ACTCCCTAGTTTGACAATTT+GGG | + | chr1_2:74906520-74906539 | Msa0092450:intron | 35.0% | |
| GACAATTTGGGCCTAATTAT+TGG | + | chr1_2:74906532-74906551 | Msa0092450:intron | 35.0% | |
| !! | AAAAAAAAAAAGGTGGGCTG+TGG | + | chr1_2:74906604-74906623 | Msa0092450:intron | 35.0% |
| !! | AAAAAAAAAAGGTGGGCTGT+GGG | + | chr1_2:74906605-74906624 | Msa0092450:intron | 35.0% |
| AATTGGTTACATTGCTGAGT+TGG | + | chr1_2:74906636-74906655 | Msa0092450:intron | 35.0% | |
| ATTGGTTACATTGCTGAGTT+GGG | + | chr1_2:74906637-74906656 | Msa0092450:intron | 35.0% | |
| ! | CACTCATTTTACGCAATTTG+AGG | - | chr1_2:74906801-74906820 | None:intergenic | 35.0% |
| CTCAAATTGCGTAAAATGAG+TGG | + | chr1_2:74906799-74906818 | Msa0092450:intron | 35.0% | |
| TGTCTCCAATTGATGTAGAA+CGG | - | chr1_2:74906838-74906857 | None:intergenic | 35.0% | |
| AATACTCAAGCAACAGAAAC+TGG | - | chr1_2:74907207-74907226 | None:intergenic | 35.0% | |
| !! | TTTGTCAGACTTAGCTCTAA+TGG | - | chr1_2:74907237-74907256 | None:intergenic | 35.0% |
| ! | TTTTGGTAGATTCGTGAGTT+TGG | + | chr1_2:74907287-74907306 | Msa0092450:intron | 35.0% |
| ! | TACAGCAGGACATTTAAAGT+CGG | - | chr1_2:74907396-74907415 | None:intergenic | 35.0% |
| AATTCATAACATGGTACAGC+AGG | - | chr1_2:74907410-74907429 | None:intergenic | 35.0% | |
| GTACCATGTTATGAATTTGC+TGG | + | chr1_2:74907413-74907432 | Msa0092450:intron | 35.0% | |
| TCAACTAGACAGAATAATCC+CGG | + | chr1_2:74907545-74907564 | Msa0092450:intron | 35.0% | |
| ACTAAGGGGAATAAAAATCC+CGG | - | chr1_2:74907567-74907586 | None:intergenic | 35.0% | |
| TGATCCAGCTAAAGAAACAA+AGG | - | chr1_2:74907706-74907725 | None:intergenic | 35.0% | |
| GTATTTGTCTTGATCAGGTA+AGG | + | chr1_2:74907804-74907823 | Msa0092450:intron | 35.0% | |
| GCTAGCATTTCAAATTTCAC+TGG | + | chr1_2:74907997-74908016 | Msa0092450:intron | 35.0% | |
| ! | ACATTAGGTGAAGGTGTATT+TGG | - | chr1_2:74908148-74908167 | None:intergenic | 35.0% |
| CATGCAACGAAAATTTGGTT+TGG | - | chr1_2:74908337-74908356 | None:intergenic | 35.0% | |
| ATAGCTTGGTCCATCTTATT+CGG | - | chr1_2:74908389-74908408 | None:intergenic | 35.0% | |
| CGTAAACCCAACAACAGAAA+AGG | - | chr1_2:74904247-74904266 | None:intergenic | 40.0% | |
| GTTGTTGGGTTTACGTGTAA+CGG | + | chr1_2:74904252-74904271 | Msa0092450:five_prime_UTR | 40.0% | |
| ! | GGAATTTTTGCTTCTCTTGC+TGG | + | chr1_2:74904511-74904530 | Msa0092450:intron | 40.0% |
| CAGTCACATACAAACTTTGC+TGG | + | chr1_2:74905108-74905127 | Msa0092450:intron | 40.0% | |
| TTCCTTGACAGAGTGACAAT+TGG | + | chr1_2:74905370-74905389 | Msa0092450:intron | 40.0% | |
| ! | CAATTGGCCTGCACTATTTA+CGG | + | chr1_2:74905386-74905405 | Msa0092450:intron | 40.0% |
| AGGTTTACCGTAAATAGTGC+AGG | - | chr1_2:74905396-74905415 | None:intergenic | 40.0% | |
| GCGTCATACAAATTGCAACA+AGG | - | chr1_2:74905416-74905435 | None:intergenic | 40.0% | |
| TTGTATGACGCTTCTGTTCT+TGG | + | chr1_2:74905425-74905444 | Msa0092450:intron | 40.0% | |
| CTGCATGCTCTGTGATAATT+TGG | - | chr1_2:74905499-74905518 | None:intergenic | 40.0% | |
| TGAACAAAGCGTATAAGGAG+AGG | + | chr1_2:74905589-74905608 | Msa0092450:intron | 40.0% | |
| AGTAATTCTCTTAGAAGCGG+AGG | + | chr1_2:74905625-74905644 | Msa0092450:intron | 40.0% | |
| GTAAGAGCTTAGAGTGTGTT+TGG | + | chr1_2:74905663-74905682 | Msa0092450:intron | 40.0% | |
| GAATTCCATTGTTTGGATGG+GGG | - | chr1_2:74905794-74905813 | None:intergenic | 40.0% | |
| GGTGAATTCCATTGTTTGGA+TGG | - | chr1_2:74905797-74905816 | None:intergenic | 40.0% | |
| CAAAAGGAAAGCCTAGTTTG+AGG | - | chr1_2:74905904-74905923 | None:intergenic | 40.0% | |
| CATCAGATTGGACCCATATT+TGG | - | chr1_2:74905987-74906006 | None:intergenic | 40.0% | |
| ! | GCTTTGTTAGAAAACAGCCT+CGG | + | chr1_2:74906129-74906148 | Msa0092450:intron | 40.0% |
| GTTGGAGAAACAAACCATGA+AGG | + | chr1_2:74906172-74906191 | Msa0092450:intron | 40.0% | |
| CAAACCATGAAGGCTATGTT+TGG | + | chr1_2:74906182-74906201 | Msa0092450:intron | 40.0% | |
| GGTCAAACAATGTGGTTATG+AGG | + | chr1_2:74906218-74906237 | Msa0092450:intron | 40.0% | |
| AGGCCCAAATTGTCAAACTA+GGG | - | chr1_2:74906526-74906545 | None:intergenic | 40.0% | |
| TAGGCCCAAATTGTCAAACT+AGG | - | chr1_2:74906527-74906546 | None:intergenic | 40.0% | |
| ACACACCGTTCTACATCAAT+TGG | + | chr1_2:74906830-74906849 | Msa0092450:intron | 40.0% | |
| ACATCAAACCCTCACCATTT+CGG | + | chr1_2:74906857-74906876 | Msa0092450:intron | 40.0% | |
| TCATGAGTAATGAGCCGAAA+TGG | - | chr1_2:74906874-74906893 | None:intergenic | 40.0% | |
| TTACTCATGACCTAGCAAGA+TGG | + | chr1_2:74906884-74906903 | Msa0092450:intron | 40.0% | |
| TGATGTGTAACCATCTTGCT+AGG | - | chr1_2:74906897-74906916 | None:intergenic | 40.0% | |
| GCAAGATGGTTACACATCAA+AGG | + | chr1_2:74906898-74906917 | Msa0092450:intron | 40.0% | |
| ! | CAAAGGTGCAAATTTCTTGC+TGG | + | chr1_2:74906915-74906934 | Msa0092450:intron | 40.0% |
| GGGTTCAAAAATCACAACCT+AGG | - | chr1_2:74907009-74907028 | None:intergenic | 40.0% | |
| !! | TCAGACTTAGCTCTAATGGT+GGG | - | chr1_2:74907233-74907252 | None:intergenic | 40.0% |
| !! | TATGGATGCACCACTAGTTT+TGG | + | chr1_2:74907270-74907289 | Msa0092450:intron | 40.0% |
| CACGAATCTACCAAAACTAG+TGG | - | chr1_2:74907283-74907302 | None:intergenic | 40.0% | |
| !! | TGTCTAGTTGAGTTGAAGCA+AGG | - | chr1_2:74907536-74907555 | None:intergenic | 40.0% |
| CAACTAGACAGAATAATCCC+GGG | + | chr1_2:74907546-74907565 | Msa0092450:intron | 40.0% | |
| CTAAGGGGAATAAAAATCCC+GGG | - | chr1_2:74907566-74907585 | None:intergenic | 40.0% | |
| TTGTTAACAGACTGAAGCTG+TGG | + | chr1_2:74907658-74907677 | Msa0092450:intron | 40.0% | |
| ! | GTGTCCTTTGTTTCTTTAGC+TGG | + | chr1_2:74907699-74907718 | Msa0092450:CDS | 40.0% |
| TGTTTCTTTAGCTGGATCAG+CGG | + | chr1_2:74907707-74907726 | Msa0092450:CDS | 40.0% | |
| ! | GAGGAAAATCGGTTCTCATT+AGG | - | chr1_2:74907842-74907861 | None:intergenic | 40.0% |
| GACATTAGGACATTAGGTGA+AGG | - | chr1_2:74908157-74908176 | None:intergenic | 40.0% | |
| CACTGCATGCAACGAAAATT+TGG | - | chr1_2:74908342-74908361 | None:intergenic | 40.0% | |
| ! | CAAATTTTCGTTGCATGCAG+TGG | + | chr1_2:74908340-74908359 | Msa0092450:intron | 40.0% |
| !! | CATGCAGTGGACTGATTTAT+TGG | + | chr1_2:74908353-74908372 | Msa0092450:intron | 40.0% |
| ACTTCACATCCCGAATAAGA+TGG | + | chr1_2:74908376-74908395 | Msa0092450:intron | 40.0% | |
| TAGCTTGGTCCATCTTATTC+GGG | - | chr1_2:74908388-74908407 | None:intergenic | 40.0% | |
| AGATGGACCAAGCTATGATT+TGG | + | chr1_2:74908393-74908412 | Msa0092450:intron | 40.0% | |
| TGAAGCTCCAAATCATAGCT+TGG | - | chr1_2:74908403-74908422 | None:intergenic | 40.0% | |
| ACATGCAATATGAACCTACC+CGG | - | chr1_2:74908537-74908556 | None:intergenic | 40.0% | |
| CCACGAGAGTGAAATTACAT+TGG | - | chr1_2:74908587-74908606 | None:intergenic | 40.0% | |
| CCAATGTAATTTCACTCTCG+TGG | + | chr1_2:74908584-74908603 | Msa0092450:intron | 40.0% | |
| ATGTAATTTCACTCTCGTGG+TGG | + | chr1_2:74908587-74908606 | Msa0092450:intron | 40.0% | |
| ! | CGTGGTGGTTTTTACAAAGA+TGG | + | chr1_2:74908602-74908621 | Msa0092450:intron | 40.0% |
| TTGAACTCAGCAAACCAAAG+AGG | + | chr1_2:74908643-74908662 | Msa0092450:intron | 40.0% | |
| TGAGTACAACGTTTCCTCTT+TGG | - | chr1_2:74908660-74908679 | None:intergenic | 40.0% | |
| ! | GTGTAACGGAGAACCGAAAA+TGG | + | chr1_2:74904266-74904285 | Msa0092450:exon | 45.0% |
| GTAGTGAAGAAATGGAACGG+TGG | - | chr1_2:74904391-74904410 | None:intergenic | 45.0% | |
| CCAGGAAGGTAGTGAAGAAA+TGG | - | chr1_2:74904399-74904418 | None:intergenic | 45.0% | |
| CCATTTCTTCACTACCTTCC+TGG | + | chr1_2:74904396-74904415 | Msa0092450:CDS | 45.0% | |
| AGATGTGAAACTGACCAGGA+AGG | - | chr1_2:74904413-74904432 | None:intergenic | 45.0% | |
| AGAGAGATGTGAAACTGACC+AGG | - | chr1_2:74904417-74904436 | None:intergenic | 45.0% | |
| ACGACAATCTCTCGCAAGAT+AGG | + | chr1_2:74904711-74904730 | Msa0092450:intron | 45.0% | |
| ! | GCTTAAGCTCACAAAAGTGC+AGG | + | chr1_2:74904994-74905013 | Msa0092450:intron | 45.0% |
| ! | AAAAGTGCAGGCAAGCTTTG+TGG | + | chr1_2:74905006-74905025 | Msa0092450:intron | 45.0% |
| GTCAAGGAATCGTGTAACCA+AGG | - | chr1_2:74905359-74905378 | None:intergenic | 45.0% | |
| !! | GTTCTTGGTGTCAGTGAAGT+TGG | + | chr1_2:74905440-74905459 | Msa0092450:intron | 45.0% |
| ! | TGGCTTTGCTTGAGAAACAG+CGG | + | chr1_2:74905460-74905479 | Msa0092450:intron | 45.0% |
| ACAAAGCGTATAAGGAGAGG+AGG | + | chr1_2:74905592-74905611 | Msa0092450:intron | 45.0% | |
| TCTCTTAGAAGCGGAGGATT+TGG | + | chr1_2:74905631-74905650 | Msa0092450:intron | 45.0% | |
| GCTTAGAGTGTGTTTGGATG+AGG | + | chr1_2:74905669-74905688 | Msa0092450:intron | 45.0% | |
| ACATTCCCCCATCCAAACAA+TGG | + | chr1_2:74905786-74905805 | Msa0092450:intron | 45.0% | |
| ! | AGGAAAGCCTAGTTTGAGGT+GGG | - | chr1_2:74905900-74905919 | None:intergenic | 45.0% |
| AAGGAAAGCCTAGTTTGAGG+TGG | - | chr1_2:74905901-74905920 | None:intergenic | 45.0% | |
| TTGGTCAGACCTGCCAAATA+TGG | + | chr1_2:74905971-74905990 | Msa0092450:intron | 45.0% | |
| TGGTCAGACCTGCCAAATAT+GGG | + | chr1_2:74905972-74905991 | Msa0092450:intron | 45.0% | |
| AGATTGGACCCATATTTGGC+AGG | - | chr1_2:74905983-74906002 | None:intergenic | 45.0% | |
| CACGCACATCAAAGCAAAGA+TGG | + | chr1_2:74906074-74906093 | Msa0092450:intron | 45.0% | |
| GCACATCAAAGCAAAGATGG+CGG | + | chr1_2:74906077-74906096 | Msa0092450:intron | 45.0% | |
| !! | GCAAAGATGGCGGATAGATT+TGG | + | chr1_2:74906087-74906106 | Msa0092450:intron | 45.0% |
| GGCGGATAGATTTGGATCAT+TGG | + | chr1_2:74906095-74906114 | Msa0092450:intron | 45.0% | |
| AGGTAGAGTAGTAGTGAGAG+AGG | + | chr1_2:74906238-74906257 | Msa0092450:intron | 45.0% | |
| ! | TCTTTCTTTGAGGAGCTGTG+TGG | + | chr1_2:74906296-74906315 | Msa0092450:intron | 45.0% |
| GGGGCTCATGTCCAATAATT+AGG | - | chr1_2:74906546-74906565 | None:intergenic | 45.0% | |
| TTCCAGATCATGAGCGTTCT+GGG | - | chr1_2:74906566-74906585 | None:intergenic | 45.0% | |
| ! | GCTGAGTTGGGAAGTTAGTT+AGG | + | chr1_2:74906649-74906668 | Msa0092450:intron | 45.0% |
| ! | TCCCTATAACCATGCTGCTT+GGG | - | chr1_2:74906675-74906694 | None:intergenic | 45.0% |
| AAGCAGCATGGTTATAGGGA+GGG | + | chr1_2:74906675-74906694 | Msa0092450:intron | 45.0% | |
| GTAATGAGCCGAAATGGTGA+GGG | - | chr1_2:74906868-74906887 | None:intergenic | 45.0% | |
| AGTAATGAGCCGAAATGGTG+AGG | - | chr1_2:74906869-74906888 | None:intergenic | 45.0% | |
| GCAAGTCATGACACAAACCT+AGG | + | chr1_2:74906989-74907008 | Msa0092450:intron | 45.0% | |
| !! | GTCAGACTTAGCTCTAATGG+TGG | - | chr1_2:74907234-74907253 | None:intergenic | 45.0% |
| ACAAGGGCCAAACCAATAAC+TGG | - | chr1_2:74907477-74907496 | None:intergenic | 45.0% | |
| GTTTCTTTAGCTGGATCAGC+GGG | + | chr1_2:74907708-74907727 | Msa0092450:CDS | 45.0% | |
| ACAAATCTTCCCCATCAGTG+TGG | + | chr1_2:74907754-74907773 | Msa0092450:CDS | 45.0% | |
| AATTCCAGTCCACACTGATG+GGG | - | chr1_2:74907766-74907785 | None:intergenic | 45.0% | |
| CAATTCCAGTCCACACTGAT+GGG | - | chr1_2:74907767-74907786 | None:intergenic | 45.0% | |
| TGTCTTGATCAGGTAAGGAC+AGG | + | chr1_2:74907809-74907828 | Msa0092450:intron | 45.0% | |
| ACGTTGTACTCACTCGAAGT+TGG | + | chr1_2:74908668-74908687 | Msa0092450:CDS | 45.0% | |
| !!! | ATTATTTGAAATAAAAATTA+CGG | - | chr1_2:74908031-74908050 | None:intergenic | 5.0% |
| ! | TTATGGGCGATTTTCGGTCC+TGG | + | chr1_2:74904300-74904319 | Msa0092450:CDS | 50.0% |
| GTGAAGAAATGGAACGGTGG+TGG | - | chr1_2:74904388-74904407 | None:intergenic | 50.0% | |
| CTCCTTATGATGAAGGGGAG+TGG | + | chr1_2:74904575-74904594 | Msa0092450:CDS | 50.0% | |
| CTCCACTCCCCTTCATCATA+AGG | - | chr1_2:74904580-74904599 | None:intergenic | 50.0% | |
| CTTATGATGAAGGGGAGTGG+AGG | + | chr1_2:74904578-74904597 | Msa0092450:CDS | 50.0% | |
| GGCCAATTGTCACTCTGTCA+AGG | - | chr1_2:74905375-74905394 | None:intergenic | 50.0% | |
| GGCTTTGCTTGAGAAACAGC+GGG | + | chr1_2:74905461-74905480 | Msa0092450:intron | 50.0% | |
| !! | GAGGTGGGGGAATGTTTTGA+GGG | - | chr1_2:74905885-74905904 | None:intergenic | 50.0% |
| ! | TGAGGTGGGGGAATGTTTTG+AGG | - | chr1_2:74905886-74905905 | None:intergenic | 50.0% |
| ACATTCCCCCACCTCAAACT+AGG | + | chr1_2:74905890-74905909 | Msa0092450:intron | 50.0% | |
| ! | GAAAGCCTAGTTTGAGGTGG+GGG | - | chr1_2:74905898-74905917 | None:intergenic | 50.0% |
| ! | GGAAAGCCTAGTTTGAGGTG+GGG | - | chr1_2:74905899-74905918 | None:intergenic | 50.0% |
| TGGCAGGTCTGACCAATTGA+TGG | - | chr1_2:74905967-74905986 | None:intergenic | 50.0% | |
| TGATTCATCTCTTGTGGCCG+AGG | - | chr1_2:74906149-74906168 | None:intergenic | 50.0% | |
| CAGGCCAAACATAGCCTTCA+TGG | - | chr1_2:74906189-74906208 | None:intergenic | 50.0% | |
| CATGAAGGCTATGTTTGGCC+TGG | + | chr1_2:74906187-74906206 | Msa0092450:intron | 50.0% | |
| TCCAGATCATGAGCGTTCTG+GGG | - | chr1_2:74906565-74906584 | None:intergenic | 50.0% | |
| CTTCCAGATCATGAGCGTTC+TGG | - | chr1_2:74906567-74906586 | None:intergenic | 50.0% | |
| !! | AAAAAAAGGTGGGCTGTGGG+TGG | + | chr1_2:74906608-74906627 | Msa0092450:intron | 50.0% |
| !! | AAAAAAGGTGGGCTGTGGGT+GGG | + | chr1_2:74906609-74906628 | Msa0092450:intron | 50.0% |
| TTAGTTAGGCCCAAGCAGCA+TGG | + | chr1_2:74906663-74906682 | Msa0092450:intron | 50.0% | |
| GCCCAAGCAGCATGGTTATA+GGG | + | chr1_2:74906671-74906690 | Msa0092450:intron | 50.0% | |
| CTCCCTATAACCATGCTGCT+TGG | - | chr1_2:74906676-74906695 | None:intergenic | 50.0% | |
| CAAGCAGCATGGTTATAGGG+AGG | + | chr1_2:74906674-74906693 | Msa0092450:intron | 50.0% | |
| AGCAGCATGGTTATAGGGAG+GGG | + | chr1_2:74906676-74906695 | Msa0092450:intron | 50.0% | |
| TAGTGGTGAGAGAGGAGGTT+AGG | + | chr1_2:74906701-74906720 | Msa0092450:intron | 50.0% | |
| TGAGAGAGGAGGTTAGGCAT+GGG | + | chr1_2:74906707-74906726 | Msa0092450:intron | 50.0% | |
| GCAATTCCAGTCCACACTGA+TGG | - | chr1_2:74907768-74907787 | None:intergenic | 50.0% | |
| !! | TCAGTGTGGACTGGAATTGC+AGG | + | chr1_2:74907768-74907787 | Msa0092450:CDS | 50.0% |
| TCCTAACAGTCTTGAGCCAC+CGG | + | chr1_2:74908515-74908534 | Msa0092450:intron | 50.0% | |
| TGCAATATGAACCTACCCGG+TGG | - | chr1_2:74908534-74908553 | None:intergenic | 50.0% | |
| !! | GGTGGTGGAGCTACATACGA+CGG | - | chr1_2:74904373-74904392 | None:intergenic | 55.0% |
| !! | AAAAAGGTGGGCTGTGGGTG+GGG | + | chr1_2:74906610-74906629 | Msa0092450:intron | 55.0% |
| GGCCCAAGCAGCATGGTTAT+AGG | + | chr1_2:74906670-74906689 | Msa0092450:intron | 55.0% | |
| GGTTATAGGGAGGGGAGTAG+TGG | + | chr1_2:74906684-74906703 | Msa0092450:intron | 55.0% | |
| GTGAGAGAGGAGGTTAGGCA+TGG | + | chr1_2:74906706-74906725 | Msa0092450:intron | 55.0% | |
| TCTTCCCCATCAGTGTGGAC+TGG | + | chr1_2:74907759-74907778 | Msa0092450:CDS | 55.0% | |
| GGCACATGAGCAGCATAGTC+TGG | - | chr1_2:74908433-74908452 | None:intergenic | 55.0% | |
| CCTAACAGTCTTGAGCCACC+GGG | + | chr1_2:74908516-74908535 | Msa0092450:intron | 55.0% | |
| ! | ATTTTCGGTCCTGGCGTCGC+CGG | + | chr1_2:74904309-74904328 | Msa0092450:CDS | 60.0% |
| GTCAAGCCAGATCCACCAGC+CGG | - | chr1_2:74904349-74904368 | None:intergenic | 60.0% | |
| GCCCCAGAACGCTCATGATC+TGG | + | chr1_2:74906561-74906580 | Msa0092450:intron | 60.0% | |
| !! | AAAAGGTGGGCTGTGGGTGG+GGG | + | chr1_2:74906611-74906630 | Msa0092450:intron | 60.0% |
| GAGGGGAGTAGTGGTGAGAG+AGG | + | chr1_2:74906693-74906712 | Msa0092450:intron | 60.0% | |
| GGGAGTAGTGGTGAGAGAGG+AGG | + | chr1_2:74906696-74906715 | Msa0092450:intron | 60.0% | |
| CCCGGTGGCTCAAGACTGTT+AGG | - | chr1_2:74908519-74908538 | None:intergenic | 60.0% | |
| ACAGTCTTGAGCCACCGGGT+AGG | + | chr1_2:74908520-74908539 | Msa0092450:intron | 60.0% | |
| AAAACTGCTCCGGCGACGCC+AGG | - | chr1_2:74904321-74904340 | None:intergenic | 65.0% | |
| ! | GGCGTCGCCGGAGCAGTTTT+CGG | + | chr1_2:74904321-74904340 | Msa0092450:CDS | 65.0% |
| !! | GCCGGAGCAGTTTTCGGTGC+CGG | + | chr1_2:74904327-74904346 | Msa0092450:CDS | 65.0% |
| ! | GCCGGCACCGAAAACTGCTC+CGG | - | chr1_2:74904331-74904350 | None:intergenic | 65.0% |
| !!! | GAGCAGTTTTCGGTGCCGGC+TGG | + | chr1_2:74904331-74904350 | Msa0092450:CDS | 65.0% |
| !!! | CAGTTTTCGGTGCCGGCTGG+TGG | + | chr1_2:74904334-74904353 | Msa0092450:CDS | 65.0% |
| !! | AAAGGTGGGCTGTGGGTGGG+GGG | + | chr1_2:74906612-74906631 | Msa0092450:intron | 65.0% |
| GGCTGTGGGTGGGGGGAAAT+TGG | + | chr1_2:74906619-74906638 | Msa0092450:intron | 65.0% | |
| !! | TCGGTGCCGGCTGGTGGATC+TGG | + | chr1_2:74904340-74904359 | Msa0092450:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 74904221 | 74908704 | 74904221 | ID=Msa0092450;Name=Msa0092450 |
| chr1_2 | mRNA | 74904221 | 74908704 | 74904221 | ID=Msa0092450-mRNA-1;Parent=Msa0092450;Name=Msa0092450-mRNA-1;_AED=0.22;_eAED=0.31;_QI=64|0.66|0.75|1|0.66|0.75|4|0|141 |
| chr1_2 | exon | 74904221 | 74904417 | 74904221 | ID=Msa0092450-mRNA-1:exon:26401;Parent=Msa0092450-mRNA-1 |
| chr1_2 | exon | 74904512 | 74904599 | 74904512 | ID=Msa0092450-mRNA-1:exon:26402;Parent=Msa0092450-mRNA-1 |
| chr1_2 | exon | 74907668 | 74907820 | 74907668 | ID=Msa0092450-mRNA-1:exon:26403;Parent=Msa0092450-mRNA-1 |
| chr1_2 | exon | 74908653 | 74908704 | 74908653 | ID=Msa0092450-mRNA-1:exon:26404;Parent=Msa0092450-mRNA-1 |
| chr1_2 | five_prime_UTR | 74904221 | 74904284 | 74904221 | ID=Msa0092450-mRNA-1:five_prime_utr;Parent=Msa0092450-mRNA-1 |
| chr1_2 | CDS | 74904285 | 74904417 | 74904285 | ID=Msa0092450-mRNA-1:cds;Parent=Msa0092450-mRNA-1 |
| chr1_2 | CDS | 74904512 | 74904599 | 74904512 | ID=Msa0092450-mRNA-1:cds;Parent=Msa0092450-mRNA-1 |
| chr1_2 | CDS | 74907668 | 74907820 | 74907668 | ID=Msa0092450-mRNA-1:cds;Parent=Msa0092450-mRNA-1 |
| chr1_2 | CDS | 74908653 | 74908704 | 74908653 | ID=Msa0092450-mRNA-1:cds;Parent=Msa0092450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
