Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0094510 | XP_003610026.1 | 90.278 | 576 | 10 | 1 | 163 | 692 | 6 | 581 | 0.0 | 1054 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0094510 | sp|Q9LU77|PIN2_ARATH | 67.333 | 600 | 124 | 12 | 163 | 692 | 6 | 603 | 0.0 | 743 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0094510 | Q84YG8 | 90.278 | 576 | 10 | 1 | 163 | 692 | 6 | 581 | 0.0 | 1054 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0047120 | Msa0094510 | 0.891441 | 3.962919e-74 | -8.615850e-47 |
Msa0094510 | Msa1265840 | 0.931580 | 3.062063e-94 | -8.615850e-47 |
Msa0094510 | Msa1394340 | 0.897075 | 1.998696e-76 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0094510 | MtrunA17_Chr4g0071571 | 90.278 | 576 | 10 | 1 | 163 | 692 | 6 | 581 | 0.0 | 1054 |
Msa0094510 | MtrunA17_Chr6g0478431 | 51.546 | 582 | 203 | 13 | 163 | 692 | 6 | 560 | 2.39e-177 | 521 |
Msa0094510 | MtrunA17_Chr7g0255941 | 52.487 | 583 | 183 | 13 | 163 | 692 | 6 | 547 | 1.53e-173 | 511 |
Msa0094510 | MtrunA17_Chr8g0393111 | 49.169 | 602 | 200 | 18 | 163 | 732 | 6 | 533 | 6.71e-162 | 479 |
Msa0094510 | MtrunA17_Chr4g0044181 | 44.357 | 638 | 223 | 19 | 161 | 692 | 4 | 615 | 1.63e-148 | 449 |
Msa0094510 | MtrunA17_Chr4g0071551 | 95.215 | 209 | 10 | 0 | 163 | 371 | 6 | 214 | 9.87e-142 | 415 |
Msa0094510 | MtrunA17_Chr1g0160461 | 44.719 | 606 | 225 | 16 | 163 | 692 | 6 | 577 | 2.14e-137 | 419 |
Msa0094510 | MtrunA17_Chr1g0159341 | 42.500 | 560 | 210 | 22 | 162 | 691 | 5 | 482 | 2.59e-114 | 356 |
Msa0094510 | MtrunA17_Chr4g0071591 | 88.957 | 163 | 6 | 2 | 1 | 162 | 1 | 152 | 2.04e-93 | 297 |
Msa0094510 | MtrunA17_Chr2g0298971 | 34.315 | 577 | 242 | 15 | 163 | 691 | 6 | 493 | 2.10e-86 | 282 |
Msa0094510 | MtrunA17_Chr4g0071561 | 54.206 | 321 | 109 | 10 | 385 | 692 | 1 | 296 | 3.42e-86 | 275 |
Msa0094510 | MtrunA17_Chr6g0452821 | 56.209 | 153 | 67 | 0 | 163 | 315 | 6 | 158 | 5.90e-48 | 173 |
Msa0094510 | MtrunA17_Chr6g0452821 | 58.333 | 72 | 30 | 0 | 620 | 691 | 244 | 315 | 8.67e-17 | 82.8 |
Msa0094510 | MtrunA17_Chr7g0216571 | 55.128 | 156 | 65 | 2 | 163 | 316 | 17 | 169 | 2.03e-46 | 169 |
Msa0094510 | MtrunA17_Chr7g0216571 | 56.164 | 73 | 32 | 0 | 620 | 692 | 251 | 323 | 1.29e-16 | 82.4 |
Msa0094510 | MtrunA17_Chr7g0249141 | 49.020 | 153 | 77 | 1 | 161 | 313 | 4 | 155 | 1.30e-45 | 167 |
Msa0094510 | MtrunA17_Chr7g0249141 | 45.679 | 81 | 42 | 1 | 612 | 690 | 235 | 315 | 1.06e-15 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0094510 | AT5G57090.1 | 67.333 | 600 | 124 | 12 | 163 | 692 | 6 | 603 | 0.0 | 743 |
Msa0094510 | AT5G57090.2 | 63.817 | 503 | 111 | 11 | 260 | 692 | 2 | 503 | 0.0 | 568 |
Msa0094510 | AT1G23080.3 | 51.085 | 599 | 195 | 13 | 161 | 692 | 4 | 571 | 1.22e-175 | 518 |
Msa0094510 | AT1G23080.4 | 51.085 | 599 | 195 | 13 | 161 | 692 | 4 | 571 | 1.22e-175 | 518 |
Msa0094510 | AT1G70940.1 | 50.242 | 621 | 192 | 15 | 161 | 692 | 4 | 596 | 5.78e-175 | 517 |
Msa0094510 | AT2G01420.2 | 50.333 | 600 | 199 | 13 | 161 | 692 | 4 | 572 | 8.51e-175 | 515 |
Msa0094510 | AT2G01420.1 | 50.582 | 601 | 192 | 14 | 161 | 692 | 4 | 568 | 1.48e-174 | 514 |
Msa0094510 | AT1G73590.1 | 51.085 | 599 | 198 | 14 | 163 | 692 | 6 | 578 | 8.72e-169 | 500 |
Msa0094510 | AT1G23080.1 | 48.425 | 603 | 209 | 15 | 161 | 692 | 4 | 575 | 2.56e-159 | 476 |
Msa0094510 | AT1G23080.2 | 48.897 | 544 | 180 | 13 | 161 | 637 | 4 | 516 | 1.07e-149 | 448 |
Msa0094510 | AT2G01420.3 | 47.349 | 547 | 185 | 13 | 161 | 637 | 4 | 517 | 9.58e-144 | 432 |
Msa0094510 | AT1G77110.2 | 40.794 | 554 | 271 | 15 | 162 | 691 | 5 | 525 | 9.29e-111 | 348 |
Msa0094510 | AT1G77110.1 | 40.794 | 554 | 271 | 15 | 162 | 691 | 5 | 525 | 2.53e-110 | 347 |
Msa0094510 | AT5G16530.2 | 44.776 | 201 | 98 | 3 | 163 | 363 | 6 | 193 | 6.98e-48 | 172 |
Msa0094510 | AT5G16530.2 | 52.113 | 71 | 34 | 0 | 620 | 690 | 233 | 303 | 3.97e-15 | 77.8 |
Msa0094510 | AT5G16530.1 | 52.941 | 153 | 71 | 1 | 163 | 315 | 6 | 157 | 2.48e-47 | 172 |
Msa0094510 | AT5G16530.1 | 52.113 | 71 | 34 | 0 | 620 | 690 | 233 | 303 | 6.21e-15 | 77.4 |
Msa0094510 | AT4G29890.1 | 61.207 | 116 | 34 | 1 | 47 | 162 | 56 | 160 | 4.21e-42 | 159 |
Msa0094510 | AT5G15100.1 | 47.126 | 174 | 83 | 2 | 161 | 330 | 4 | 172 | 1.31e-41 | 156 |
Msa0094510 | AT5G15100.1 | 52.055 | 73 | 35 | 0 | 620 | 692 | 251 | 323 | 2.55e-15 | 79.0 |
Find 178 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 1_2:-77741520 | Msa0094510:CDS |
AAAGCTGCTTCTACTGATTT+TGG | 0.151528 | 1_2:-77741355 | Msa0094510:CDS |
GTGGCGTCATATTATTTAAA+TGG | 0.167054 | 1_2:+77741848 | None:intergenic |
GCTTTCTCTATAGGAATATT+TGG | 0.185758 | 1_2:+77744567 | None:intergenic |
TGCGGTTTGGTTGCAAATTT+TGG | 0.187589 | 1_2:+77744790 | None:intergenic |
TCTGACGTTGTTTCGCTTAA+TGG | 0.202697 | 1_2:-77741979 | Msa0094510:CDS |
GTTATAGAAGCTGCAGTTTC+AGG | 0.222137 | 1_2:+77742018 | None:intergenic |
CATGCCTCCATTCTTGCTTC+TGG | 0.227723 | 1_2:-77743134 | Msa0094510:CDS |
TTGCAGCTCCATTTGGTTCT+TGG | 0.249044 | 1_2:-77743335 | Msa0094510:intron |
CACCCAGTACTGAGTATATT+TGG | 0.250618 | 1_2:+77740080 | None:intergenic |
TTAAGATTCCCTTCGGAAAT+AGG | 0.258413 | 1_2:+77741391 | None:intergenic |
TTGTGTTGCAGGGTTATATT+TGG | 0.267057 | 1_2:-77739953 | Msa0094510:intron |
CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 1_2:+77740987 | None:intergenic |
ATGTGCAACTCCTTGTTATT+AGG | 0.280094 | 1_2:+77741439 | None:intergenic |
CTATTTGTGTATCCGTGTTT+TGG | 0.282706 | 1_2:+77741703 | None:intergenic |
TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 1_2:-77742104 | Msa0094510:CDS |
CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 1_2:-77741946 | Msa0094510:CDS |
TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 1_2:-77742187 | Msa0094510:CDS |
GATCATTGGAAGATATAAAA+TGG | 0.291739 | 1_2:+77742349 | None:intergenic |
ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 1_2:+77740998 | None:intergenic |
ATACTCTACTATGTGCTTCT+TGG | 0.327447 | 1_2:-77739905 | Msa0094510:CDS |
TCCATTCTTGCTTCTGGAAG+TGG | 0.330381 | 1_2:-77743128 | Msa0094510:CDS |
AAGATATTGAATTCTATTAG+AGG | 0.331499 | 1_2:-77739791 | Msa0094510:three_prime_UTR |
CTTACATGTTGCAATTGTTC+AGG | 0.334263 | 1_2:-77740264 | Msa0094510:CDS |
TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 1_2:+77740100 | None:intergenic |
CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 1_2:-77742186 | Msa0094510:CDS |
CACATAGTAGAGTATTGTTA+TGG | 0.345910 | 1_2:+77739913 | None:intergenic |
TGAATATGCAGGTCTGTTCA+TGG | 0.369728 | 1_2:-77740411 | Msa0094510:intron |
GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 1_2:+77741517 | None:intergenic |
AAGATCAACTACTAACTCTA+TGG | 0.372841 | 1_2:-77741893 | Msa0094510:CDS |
TCTTGGAGTATAATCTATCT+TGG | 0.373259 | 1_2:-77739888 | Msa0094510:CDS |
GATAGCATGGGTGGTGGAAA+TGG | 0.382932 | 1_2:-77741469 | Msa0094510:CDS |
AGGAGTTGCACATGTTTGTT+TGG | 0.388483 | 1_2:-77741429 | Msa0094510:CDS |
TGTCTAATTGCAGCTCCATT+TGG | 0.389868 | 1_2:-77743342 | Msa0094510:intron |
ACTACTAACTCTATGGTATC+TGG | 0.400134 | 1_2:-77741886 | Msa0094510:CDS |
TGGCGTCATATTATTTAAAT+GGG | 0.400508 | 1_2:+77741849 | None:intergenic |
AATGTTTGTTAGGAAAATTA+AGG | 0.402168 | 1_2:+77744664 | None:intergenic |
CTCCATTTGGTTCTTGGAAG+GGG | 0.404376 | 1_2:-77743329 | Msa0094510:CDS |
AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 1_2:-77740979 | Msa0094510:CDS |
GTGATGACAGTGGGAACGTC+CGG | 0.407372 | 1_2:-77743181 | Msa0094510:CDS |
TCCACTTCCAGAAGCAAGAA+TGG | 0.417535 | 1_2:+77743127 | None:intergenic |
TTCACACCAGATCAATGTTC+TGG | 0.419637 | 1_2:-77742417 | Msa0094510:CDS |
ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 1_2:+77742183 | None:intergenic |
GGTGTAGCTGCTTTCTCTAT+AGG | 0.426159 | 1_2:+77744558 | None:intergenic |
ACTAGGAGATGTGGAATTTG+TGG | 0.426296 | 1_2:-77743210 | Msa0094510:CDS |
ATTCATAGCATAAGGATCAT+TGG | 0.433457 | 1_2:+77742335 | None:intergenic |
TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 1_2:-77741585 | Msa0094510:CDS |
CATCCAAATATACTCAGTAC+TGG | 0.436602 | 1_2:-77740083 | Msa0094510:CDS |
ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 1_2:-77740523 | Msa0094510:CDS |
ATTTGCACACGAATTCTTGT+TGG | 0.439380 | 1_2:+77744747 | None:intergenic |
CACAAAGGGAACAATACCTT+GGG | 0.446341 | 1_2:+77740127 | None:intergenic |
TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 1_2:+77742197 | None:intergenic |
AAAACCAAGATAGTCTTGAT+TGG | 0.448110 | 1_2:-77742236 | Msa0094510:CDS |
ATGCCGACAAACATTGTAGA+AGG | 0.453434 | 1_2:+77743157 | None:intergenic |
AGTCCTCGGAGTAGCCCCTT+TGG | 0.453442 | 1_2:+77741636 | None:intergenic |
AAACTAGATCCTCTTGGAGT+TGG | 0.454124 | 1_2:+77741772 | None:intergenic |
GTAATTAAACTCACGTGGTA+AGG | 0.456118 | 1_2:+77743083 | None:intergenic |
AACAAGAATTCGTGTGCAAA+TGG | 0.459640 | 1_2:-77744745 | Msa0094510:exon |
AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 1_2:-77740980 | Msa0094510:CDS |
ACGCATACCAATTGCTATTG+AGG | 0.461284 | 1_2:+77740295 | None:intergenic |
GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 1_2:+77742310 | None:intergenic |
CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 1_2:-77741505 | Msa0094510:CDS |
AAATGGTAATTCATAGCATA+AGG | 0.463466 | 1_2:+77742327 | None:intergenic |
TTTCCACATGCAATCAGCTT+AGG | 0.466851 | 1_2:+77740380 | None:intergenic |
AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 1_2:-77741556 | Msa0094510:CDS |
CGGCGCTTTACTTTGAAACA+TGG | 0.467403 | 1_2:+77741729 | None:intergenic |
TGCATGTTTAAGATTCCCTT+CGG | 0.467611 | 1_2:+77741384 | None:intergenic |
AGCTCCATTTGGTTCTTGGA+AGG | 0.468910 | 1_2:-77743331 | Msa0094510:CDS |
ATTCTATGCAATCTTCCAAA+GGG | 0.470349 | 1_2:-77741651 | Msa0094510:CDS |
TAGTCCAATCAAGACTATCT+TGG | 0.470572 | 1_2:+77742232 | None:intergenic |
GCTCCATTTGGTTCTTGGAA+GGG | 0.480797 | 1_2:-77743330 | Msa0094510:CDS |
TTTCTATGTACTCTGCGGTT+TGG | 0.483526 | 1_2:+77744777 | None:intergenic |
ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 1_2:-77740529 | Msa0094510:CDS |
GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 1_2:-77740978 | Msa0094510:CDS |
GGGCCTTCTACAATGTTTGT+CGG | 0.487084 | 1_2:-77743160 | Msa0094510:CDS |
GGATCAATATACCATGATGA+TGG | 0.489320 | 1_2:+77744534 | None:intergenic |
TTGGTTCTTGGAAGGGGAGA+AGG | 0.490334 | 1_2:-77743323 | Msa0094510:CDS |
GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 1_2:-77740302 | Msa0094510:CDS |
TCTTCGAAATTTGAAGTCCT+CGG | 0.493160 | 1_2:+77741622 | None:intergenic |
ACATAGTAGAGTATTGTTAT+GGG | 0.493323 | 1_2:+77739914 | None:intergenic |
CTCCCCTTCCAAGAACCAAA+TGG | 0.494877 | 1_2:+77743327 | None:intergenic |
ATTTCAACATCCCTTTGTCT+AGG | 0.495176 | 1_2:+77741040 | None:intergenic |
ATTATGATGATGTGGCTTCA+AGG | 0.495568 | 1_2:-77739855 | Msa0094510:CDS |
AATATCATAGCAACATATAG+TGG | 0.496035 | 1_2:+77742471 | None:intergenic |
GAGGTTGCCGCAATCACAGC+TGG | 0.497964 | 1_2:+77740314 | None:intergenic |
ACAAAGGGATGTTGAAATTG+AGG | 0.498259 | 1_2:-77741035 | Msa0094510:CDS |
TTTATACCAGAACATTGATC+TGG | 0.498746 | 1_2:+77742411 | None:intergenic |
GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 1_2:+77742196 | None:intergenic |
TGCCGCAATCACAGCTGGAC+CGG | 0.500587 | 1_2:+77740319 | None:intergenic |
TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 1_2:+77740113 | None:intergenic |
CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 1_2:+77741520 | None:intergenic |
TGGTTAAAACTAGATCCTCT+TGG | 0.501747 | 1_2:+77741766 | None:intergenic |
CATACGGTTCAGTTCGTTGG+TGG | 0.502544 | 1_2:-77742446 | Msa0094510:CDS |
TTCTCTTAGCAGTTCAGACA+TGG | 0.504510 | 1_2:-77744622 | Msa0094510:CDS |
GAAAATACCGTTGCATCAAA+AGG | 0.506036 | 1_2:-77741301 | Msa0094510:intron |
ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 1_2:-77740996 | Msa0094510:CDS |
CCACGAGCTTCAAATCTAAC+CGG | 0.512403 | 1_2:-77741829 | Msa0094510:CDS |
GGTTCATTCAAACAGATGAA+TGG | 0.513821 | 1_2:-77739833 | Msa0094510:CDS |
TAGCATACGGTTCAGTTCGT+TGG | 0.514377 | 1_2:-77742449 | Msa0094510:CDS |
GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 1_2:-77741588 | Msa0094510:CDS |
TGTAGAGGCTGGCAAGCTGT+TGG | 0.515664 | 1_2:-77744477 | Msa0094510:intron |
TTATGATGATGTGGCTTCAA+GGG | 0.517205 | 1_2:-77739854 | Msa0094510:CDS |
GATCAATATACCATGATGAT+GGG | 0.523230 | 1_2:+77744535 | None:intergenic |
CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 1_2:-77741482 | Msa0094510:CDS |
GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 1_2:-77740518 | Msa0094510:CDS |
TATTCTATGCAATCTTCCAA+AGG | 0.533077 | 1_2:-77741652 | Msa0094510:CDS |
TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 1_2:-77740990 | Msa0094510:CDS |
ATGGGTGGTGGAAATGGTAA+TGG | 0.538764 | 1_2:-77741463 | Msa0094510:CDS |
AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 1_2:-77741589 | Msa0094510:CDS |
GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 1_2:-77742147 | Msa0094510:CDS |
AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 1_2:-77741574 | Msa0094510:CDS |
GAGCTCAAGGTTGAAGAAAG+AGG | 0.545657 | 1_2:+77744512 | None:intergenic |
ATCGTGTCTTCTGTAGAGGC+TGG | 0.545935 | 1_2:-77744488 | Msa0094510:CDS |
CTCGATCGTGTCTTCTGTAG+AGG | 0.548002 | 1_2:-77744492 | Msa0094510:CDS |
ACGGAACAAATAAAGAATCC+TGG | 0.548780 | 1_2:-77743488 | Msa0094510:CDS |
TCATGTGGAACATATTTGGA+AGG | 0.549434 | 1_2:+77741322 | None:intergenic |
AAGAAAGATAGCATGGGTGG+TGG | 0.552901 | 1_2:-77741475 | Msa0094510:CDS |
GAACATGAGTCCTAGACAAA+GGG | 0.557185 | 1_2:-77741050 | Msa0094510:CDS |
TGATGACAGTGGGAACGTCC+GGG | 0.557280 | 1_2:-77743180 | Msa0094510:CDS |
GACAAACATTGTAGAAGGCC+CGG | 0.558071 | 1_2:+77743162 | None:intergenic |
ACACAAAGGGAACAATACCT+TGG | 0.558237 | 1_2:+77740126 | None:intergenic |
ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 1_2:+77741949 | None:intergenic |
ATTGAGGATGCATAAGAAGA+GGG | 0.564904 | 1_2:-77741593 | Msa0094510:CDS |
GTGGTAAGGGCAGACAAAGC+AGG | 0.569397 | 1_2:+77743097 | None:intergenic |
TAATTAAACTCACGTGGTAA+GGG | 0.569774 | 1_2:+77743084 | None:intergenic |
AGTGCTTCACCTATTTCCGA+AGG | 0.569824 | 1_2:-77741400 | Msa0094510:CDS |
GACCGGTCCAGCTGTGATTG+CGG | 0.570068 | 1_2:-77740321 | Msa0094510:CDS |
ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 1_2:+77742363 | None:intergenic |
GGAATGGCCATGTTCAGTCT+AGG | 0.576547 | 1_2:-77740502 | Msa0094510:intron |
GATGCTGAAATAGGTGAAGA+TGG | 0.576751 | 1_2:-77741937 | Msa0094510:CDS |
AGCTCAAGGTTGAAGAAAGA+GGG | 0.577949 | 1_2:+77744513 | None:intergenic |
ATTTCGTTTATCAGGATCGA+CGG | 0.578464 | 1_2:-77743507 | Msa0094510:intron |
ATGGCTGTAAGGTTCTTGAC+CGG | 0.579568 | 1_2:-77740338 | Msa0094510:CDS |
GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 1_2:+77741523 | None:intergenic |
ATTTCGAAGATGAGACATTG+AGG | 0.583231 | 1_2:-77741609 | Msa0094510:CDS |
AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 1_2:+77740531 | None:intergenic |
CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 1_2:+77742160 | None:intergenic |
ATCAATATACCATGATGATG+GGG | 0.588247 | 1_2:+77744536 | None:intergenic |
GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 1_2:+77740112 | None:intergenic |
CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 1_2:+77742159 | None:intergenic |
GTTGCTATGATATTAGCATA+CGG | 0.591499 | 1_2:-77742462 | Msa0094510:CDS |
CATTCAAACAGATGAATGGA+AGG | 0.591798 | 1_2:-77739829 | Msa0094510:CDS |
TCAATAGCAATTGGTATGCG+TGG | 0.591915 | 1_2:-77740293 | Msa0094510:CDS |
CATTGAGGATGCATAAGAAG+AGG | 0.595513 | 1_2:-77741594 | Msa0094510:CDS |
ATCCAAATATACTCAGTACT+GGG | 0.597499 | 1_2:-77740082 | Msa0094510:intron |
CAGTACTGAGTATATTTGGA+TGG | 0.598102 | 1_2:+77740084 | None:intergenic |
CAGCCTAAGCTGATTGCATG+TGG | 0.600231 | 1_2:-77740383 | Msa0094510:CDS |
AGAAGACACGATCGAGCTCA+AGG | 0.600572 | 1_2:+77744499 | None:intergenic |
CCGGTTAGATTTGAAGCTCG+TGG | 0.602636 | 1_2:+77741829 | None:intergenic |
TGGTTTGTCGTGATGACAGT+GGG | 0.602699 | 1_2:-77743190 | Msa0094510:CDS |
AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 1_2:+77741524 | None:intergenic |
AGAACATGAGTCCTAGACAA+AGG | 0.609263 | 1_2:-77741051 | Msa0094510:CDS |
CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 1_2:-77740986 | Msa0094510:CDS |
AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 1_2:-77740983 | Msa0094510:CDS |
GCAAATCAATTATGATGATG+TGG | 0.621632 | 1_2:-77739863 | Msa0094510:CDS |
TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 1_2:-77740143 | Msa0094510:intron |
TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 1_2:-77742136 | Msa0094510:CDS |
CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 1_2:+77741511 | None:intergenic |
ATATTGCAGACTAGGAGATG+TGG | 0.630286 | 1_2:-77743219 | Msa0094510:intron |
ACAAGTACCTAGACTGAACA+TGG | 0.632685 | 1_2:+77740495 | None:intergenic |
GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 1_2:-77741553 | Msa0094510:CDS |
TCAAGAGAACCAACTCCAAG+AGG | 0.636626 | 1_2:-77741781 | Msa0094510:CDS |
TTCTATGCAATCTTCCAAAG+GGG | 0.639413 | 1_2:-77741650 | Msa0094510:CDS |
AGATGGTAAACTTCATGTTG+TGG | 0.647519 | 1_2:-77741920 | Msa0094510:CDS |
GTGCTTCACCTATTTCCGAA+GGG | 0.647728 | 1_2:-77741399 | Msa0094510:CDS |
GTGTCTTTCTATGTACTCTG+CGG | 0.651047 | 1_2:+77744772 | None:intergenic |
AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 1_2:-77741478 | Msa0094510:CDS |
TGGTAATGGACCTAATAACA+AGG | 0.666402 | 1_2:-77741449 | Msa0094510:CDS |
ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 1_2:-77741481 | Msa0094510:CDS |
TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 1_2:-77741592 | Msa0094510:CDS |
CTTCCAAAGGGGCTACTCCG+AGG | 0.679174 | 1_2:-77741639 | Msa0094510:CDS |
AACAGAATATATCTCAACAC+CGG | 0.682527 | 1_2:+77741810 | None:intergenic |
TCAATATACCATGATGATGG+GGG | 0.687389 | 1_2:+77744537 | None:intergenic |
GTGGTTTGTCGTGATGACAG+TGG | 0.689616 | 1_2:-77743191 | Msa0094510:CDS |
ACTTCCAGAAGCAAGAATGG+AGG | 0.697630 | 1_2:+77743130 | None:intergenic |
CTTGTCATAACACTTGCTGG+AGG | 0.701230 | 1_2:+77740932 | None:intergenic |
AAAGCGCCGAGTCCAAAACA+CGG | 0.735141 | 1_2:-77741715 | Msa0094510:CDS |
ACAAAGGGAACAATACCTTG+GGG | 0.771870 | 1_2:+77740128 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGCTTATATTTAAAAAA+CGG | + | chr1_2:77743745-77743764 | None:intergenic | 10.0% |
!! | CATAAAAAAAACATAGAAAA+AGG | + | chr1_2:77741494-77741513 | None:intergenic | 15.0% |
!!! | CTTTTTCTATGTTTTTTTTA+TGG | - | chr1_2:77741492-77741511 | Msa0094510:CDS | 15.0% |
!! | ATGAGTAATAATTGATTATA+AGG | + | chr1_2:77741716-77741735 | None:intergenic | 15.0% |
!! | CCTATGTTTATAATAAAAAA+TGG | + | chr1_2:77741793-77741812 | None:intergenic | 15.0% |
!!! | CCATTTTTTATTATAAACAT+AGG | - | chr1_2:77741790-77741809 | Msa0094510:CDS | 15.0% |
!! | GTGTATAAATTTATTTAAGA+AGG | + | chr1_2:77741882-77741901 | None:intergenic | 15.0% |
!!! | TGAAAGTTGATATATTTATA+GGG | + | chr1_2:77743313-77743332 | None:intergenic | 15.0% |
!!! | TTGAAAGTTGATATATTTAT+AGG | + | chr1_2:77743314-77743333 | None:intergenic | 15.0% |
!!! | TAATAGATTGAAGATTTTTT+TGG | + | chr1_2:77743708-77743727 | None:intergenic | 15.0% |
!!! | ATTTTGCTTATATTTAGAAA+CGG | - | chr1_2:77743853-77743872 | Msa0094510:intron | 15.0% |
!!! | AATGTTTAATTTTAATTTGC+AGG | - | chr1_2:77744337-77744356 | Msa0094510:intron | 15.0% |
!! | TGAAATACTAAAAAAGAATT+TGG | - | chr1_2:77744517-77744536 | Msa0094510:CDS | 15.0% |
!!! | AATGTTTGTTAGGAAAATTA+AGG | + | chr1_2:77739835-77739854 | None:intergenic | 20.0% |
!!! | TATTCAATGATTAGTTTCAT+TGG | - | chr1_2:77740067-77740086 | Msa0094510:intron | 20.0% |
!! | TTATTATGTATGTTTGTTTC+TGG | - | chr1_2:77740118-77740137 | Msa0094510:CDS | 20.0% |
!! | AATAGATATAGCTTATGATA+AGG | + | chr1_2:77740242-77740261 | None:intergenic | 20.0% |
!! | ATACTGATCATATGAATTTA+AGG | - | chr1_2:77740457-77740476 | Msa0094510:intron | 20.0% |
!! | TATACTTAATATGTATTCAG+TGG | - | chr1_2:77740805-77740824 | Msa0094510:intron | 20.0% |
!!! | TAAACGAAATTGATAACTTT+TGG | + | chr1_2:77740979-77740998 | None:intergenic | 20.0% |
!! | TACATGATTAAATATGCATA+CGG | - | chr1_2:77741433-77741452 | Msa0094510:CDS | 20.0% |
!!! | ATTTTGATTCTCTTTTTCTA+TGG | - | chr1_2:77741461-77741480 | Msa0094510:CDS | 20.0% |
!! | ATTTATTTAAGAAGGAAACA+TGG | + | chr1_2:77741874-77741893 | None:intergenic | 20.0% |
!! | ATAAAATGGAAAGATAGTAA+TGG | + | chr1_2:77742136-77742155 | None:intergenic | 20.0% |
!!! | ACAAATAGTTTTCAAAGTAA+TGG | - | chr1_2:77742808-77742827 | Msa0094510:intron | 20.0% |
!!! | ATAAGCAAAATTGACTTTTT+AGG | - | chr1_2:77743755-77743774 | Msa0094510:intron | 20.0% |
!! | CATTCATTTAATGATGTATT+TGG | - | chr1_2:77743780-77743799 | Msa0094510:intron | 20.0% |
!!! | ATATTCTCCTAAGAAATTTT+TGG | - | chr1_2:77744037-77744056 | Msa0094510:intron | 20.0% |
!! | AATTAAGCCAAAAATTTCTT+AGG | + | chr1_2:77744047-77744066 | None:intergenic | 20.0% |
!!! | ATAATCATTTTTGAATATGC+AGG | - | chr1_2:77744074-77744093 | Msa0094510:intron | 20.0% |
!! | ATAAGCAACTAATTAGAATA+GGG | + | chr1_2:77744308-77744327 | None:intergenic | 20.0% |
!! | AATAAGCAACTAATTAGAAT+AGG | + | chr1_2:77744309-77744328 | None:intergenic | 20.0% |
!! | AAGATATTGAATTCTATTAG+AGG | - | chr1_2:77744705-77744724 | Msa0094510:CDS | 20.0% |
!!! | ATTTTGATTCAAATGAAAGT+TGG | - | chr1_2:77744779-77744798 | Msa0094510:five_prime_UTR | 20.0% |
!!! | TTTTGATTCAAATGAAAGTT+GGG | - | chr1_2:77744780-77744799 | Msa0094510:five_prime_UTR | 20.0% |
!! | TTAGGAAAATTAAGGTTTTG+AGG | + | chr1_2:77739827-77739846 | None:intergenic | 25.0% |
!!! | AGTTTTGATGAATGTTTGTT+AGG | + | chr1_2:77739845-77739864 | None:intergenic | 25.0% |
!! | CTTGATAATATGAGAATATG+AGG | - | chr1_2:77740172-77740191 | Msa0094510:intron | 25.0% |
! | ATTAAGCTATTTATCCAATC+CGG | + | chr1_2:77740199-77740218 | None:intergenic | 25.0% |
! | TTAAGTAGTTTATCCAATTC+AGG | + | chr1_2:77740483-77740502 | None:intergenic | 25.0% |
! | TATCATATAAGTTATGCGTA+AGG | - | chr1_2:77740533-77740552 | Msa0094510:CDS | 25.0% |
! | TTTAAGAGCTTATGGAAATA+AGG | - | chr1_2:77740629-77740648 | Msa0094510:intron | 25.0% |
! | AGTTATCAATTTCGTTTATC+AGG | - | chr1_2:77740981-77741000 | Msa0094510:CDS | 25.0% |
! | TATGTAAATACAACAAGAAC+AGG | + | chr1_2:77741119-77741138 | None:intergenic | 25.0% |
! | ACATGATTAAATATGCATAC+GGG | - | chr1_2:77741434-77741453 | Msa0094510:CDS | 25.0% |
! | GATGTGGAGATTAATTAAAA+GGG | + | chr1_2:77741557-77741576 | None:intergenic | 25.0% |
! | TGATGTGGAGATTAATTAAA+AGG | + | chr1_2:77741558-77741577 | None:intergenic | 25.0% |
! | AATTCATGCACATGTAAATT+AGG | + | chr1_2:77741656-77741675 | None:intergenic | 25.0% |
! | AATTGATTATAAGGCTAAGT+AGG | + | chr1_2:77741707-77741726 | None:intergenic | 25.0% |
! | CAAAGAAATTGTTATAGCTA+GGG | + | chr1_2:77741923-77741942 | None:intergenic | 25.0% |
! | ACAAAGAAATTGTTATAGCT+AGG | + | chr1_2:77741924-77741943 | None:intergenic | 25.0% |
! | AATATCATAGCAACATATAG+TGG | + | chr1_2:77742028-77742047 | None:intergenic | 25.0% |
! | GATCATTGGAAGATATAAAA+TGG | + | chr1_2:77742150-77742169 | None:intergenic | 25.0% |
! | AAATGGTAATTCATAGCATA+AGG | + | chr1_2:77742172-77742191 | None:intergenic | 25.0% |
! | TGGCGTCATATTATTTAAAT+GGG | + | chr1_2:77742650-77742669 | None:intergenic | 25.0% |
!! | AGTTTTCAAAGTAATGGTAA+TGG | - | chr1_2:77742814-77742833 | Msa0094510:intron | 25.0% |
!! | ATTTTCATGTGGAACATATT+TGG | + | chr1_2:77743181-77743200 | None:intergenic | 25.0% |
!! | TTTAATACCTTTTGATGCAA+CGG | + | chr1_2:77743205-77743224 | None:intergenic | 25.0% |
!!! | TTGAAGATTTTTTTGGAGAT+TGG | + | chr1_2:77743701-77743720 | None:intergenic | 25.0% |
! | TGCTTATATTTAAAAAACGG+AGG | + | chr1_2:77743742-77743761 | None:intergenic | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | + | chr1_2:77743819-77743838 | None:intergenic | 25.0% |
! | TTCTTAGGAGAATATAATGT+TGG | + | chr1_2:77744032-77744051 | None:intergenic | 25.0% |
! | TAAGCAACTAATTAGAATAG+GGG | + | chr1_2:77744307-77744326 | None:intergenic | 25.0% |
!!! | ACATAGTAGAGTATTGTTAT+GGG | + | chr1_2:77744585-77744604 | None:intergenic | 25.0% |
GCTTTCTCTATAGGAATATT+TGG | + | chr1_2:77739932-77739951 | None:intergenic | 30.0% | |
! | ATCAATATACCATGATGATG+GGG | + | chr1_2:77739963-77739982 | None:intergenic | 30.0% |
GATCAATATACCATGATGAT+GGG | + | chr1_2:77739964-77739983 | None:intergenic | 30.0% | |
TTAAGCTATTTATCCAATCC+GGG | + | chr1_2:77740198-77740217 | None:intergenic | 30.0% | |
AAGCTATCATGAAGAACATA+TGG | - | chr1_2:77740301-77740320 | Msa0094510:CDS | 30.0% | |
! | TATGAATTTAAGGCCTGAAT+TGG | - | chr1_2:77740467-77740486 | Msa0094510:intron | 30.0% |
! | AAGCTATCTTTAAGAGCTTA+TGG | - | chr1_2:77740621-77740640 | Msa0094510:intron | 30.0% |
ATAAGGCTAAAAACAGCTTA+TGG | - | chr1_2:77740646-77740665 | Msa0094510:intron | 30.0% | |
TGATATAAGCCAATTGAAAC+AGG | - | chr1_2:77740724-77740743 | Msa0094510:intron | 30.0% | |
AAACAGGCTATGAATGTATA+TGG | - | chr1_2:77740740-77740759 | Msa0094510:intron | 30.0% | |
! | GTTTTATGAGATTTCCTTGA+CGG | - | chr1_2:77740953-77740972 | Msa0094510:CDS | 30.0% |
TTCTATTGAAGACAGATATG+TGG | + | chr1_2:77741085-77741104 | None:intergenic | 30.0% | |
TAATTAAACTCACGTGGTAA+GGG | + | chr1_2:77741415-77741434 | None:intergenic | 30.0% | |
ATCATGTAATTAAACTCACG+TGG | + | chr1_2:77741421-77741440 | None:intergenic | 30.0% | |
AATGTTGTAGTAATGTGATG+TGG | + | chr1_2:77741573-77741592 | None:intergenic | 30.0% | |
TGTTAAGTCTTCTCTTATAG+AGG | + | chr1_2:77741828-77741847 | None:intergenic | 30.0% | |
CTATCTATAACCATGATTAC+CGG | - | chr1_2:77741968-77741987 | Msa0094510:CDS | 30.0% | |
AACATCGTATATATCCTTAC+CGG | + | chr1_2:77741990-77742009 | None:intergenic | 30.0% | |
GTTGCTATGATATTAGCATA+CGG | - | chr1_2:77742034-77742053 | Msa0094510:CDS | 30.0% | |
TTTATACCAGAACATTGATC+TGG | + | chr1_2:77742088-77742107 | None:intergenic | 30.0% | |
ATTCATAGCATAAGGATCAT+TGG | + | chr1_2:77742164-77742183 | None:intergenic | 30.0% | |
CTTCAAAAAGTAGTTATCCT+TGG | - | chr1_2:77742208-77742227 | Msa0094510:CDS | 30.0% | |
! | AAAACCAAGATAGTCTTGAT+TGG | - | chr1_2:77742260-77742279 | Msa0094510:CDS | 30.0% |
CATACATAGCTCTTAAAAGA+GGG | + | chr1_2:77742339-77742358 | None:intergenic | 30.0% | |
! | TTGTTCTGCAAAGTGTTATT+TGG | - | chr1_2:77742392-77742411 | Msa0094510:CDS | 30.0% |
AAGATCAACTACTAACTCTA+TGG | - | chr1_2:77742603-77742622 | Msa0094510:intron | 30.0% | |
GTGGCGTCATATTATTTAAA+TGG | + | chr1_2:77742651-77742670 | None:intergenic | 30.0% | |
AACAGAATATATCTCAACAC+CGG | + | chr1_2:77742689-77742708 | None:intergenic | 30.0% | |
ACATGGCATAAAAATCAGTT+TGG | + | chr1_2:77742753-77742772 | None:intergenic | 30.0% | |
TATTCTATGCAATCTTCCAA+AGG | - | chr1_2:77742844-77742863 | Msa0094510:intron | 30.0% | |
ATTCTATGCAATCTTCCAAA+GGG | - | chr1_2:77742845-77742864 | Msa0094510:intron | 30.0% | |
ACAAAGAAGAAAGATAGCAT+GGG | - | chr1_2:77743015-77743034 | Msa0094510:intron | 30.0% | |
! | ATCTTCTTCTGGCTAATATA+TGG | + | chr1_2:77743501-77743520 | None:intergenic | 30.0% |
ATATATTAGCCAGAAGAAGA+TGG | - | chr1_2:77743500-77743519 | Msa0094510:intron | 30.0% | |
ATAAGACTTGAGTAGGTATT+AGG | + | chr1_2:77743630-77743649 | None:intergenic | 30.0% | |
! | AATACCTACTCAAGTCTTAT+AGG | - | chr1_2:77743630-77743649 | Msa0094510:intron | 30.0% |
TTTGGTCTCTTGTATCATTT+AGG | - | chr1_2:77743658-77743677 | Msa0094510:intron | 30.0% | |
TTGCTTATATTTAGAAACGG+AGG | - | chr1_2:77743856-77743875 | Msa0094510:intron | 30.0% | |
TGCTTATATTTAGAAACGGA+GGG | - | chr1_2:77743857-77743876 | Msa0094510:intron | 30.0% | |
GAAATGCCATCTATTGTAAA+AGG | - | chr1_2:77743940-77743959 | Msa0094510:intron | 30.0% | |
! | ATGGAACCTTTTACAATAGA+TGG | + | chr1_2:77743949-77743968 | None:intergenic | 30.0% |
TATTCTTTGGCAAACACAAA+GGG | + | chr1_2:77744386-77744405 | None:intergenic | 30.0% | |
ATCCAAATATACTCAGTACT+GGG | - | chr1_2:77744414-77744433 | Msa0094510:intron | 30.0% | |
ATTGCAAGTGATTAAGTATG+TGG | - | chr1_2:77744488-77744507 | Msa0094510:CDS | 30.0% | |
AATTTGGTATTTGTGTTGCA+GGG | - | chr1_2:77744533-77744552 | Msa0094510:CDS | 30.0% | |
!! | CACATAGTAGAGTATTGTTA+TGG | + | chr1_2:77744586-77744605 | None:intergenic | 30.0% |
TCTTGGAGTATAATCTATCT+TGG | - | chr1_2:77744608-77744627 | Msa0094510:CDS | 30.0% | |
! | GCAAATCAATTATGATGATG+TGG | - | chr1_2:77744633-77744652 | Msa0094510:CDS | 30.0% |
ATTTGCACACGAATTCTTGT+TGG | + | chr1_2:77739752-77739771 | None:intergenic | 35.0% | |
AACAAGAATTCGTGTGCAAA+TGG | - | chr1_2:77739751-77739770 | Msa0094510:three_prime_UTR | 35.0% | |
!! | TTTTGGAGATTTGGGATGAA+GGG | + | chr1_2:77739797-77739816 | None:intergenic | 35.0% |
!! | GTTGTCTCTTTTGGAGATTT+GGG | + | chr1_2:77739805-77739824 | None:intergenic | 35.0% |
!! | TCAATATACCATGATGATGG+GGG | + | chr1_2:77739962-77739981 | None:intergenic | 35.0% |
GGATCAATATACCATGATGA+TGG | + | chr1_2:77739965-77739984 | None:intergenic | 35.0% | |
!! | TGTTTCTGGAGAGATAACTT+TGG | - | chr1_2:77740132-77740151 | Msa0094510:CDS | 35.0% |
TAATATGAGAATATGAGGCC+CGG | - | chr1_2:77740177-77740196 | Msa0094510:intron | 35.0% | |
ATCATCTTTCTTTCCTCCAT+AGG | + | chr1_2:77740432-77740451 | None:intergenic | 35.0% | |
CATTCATAGCCTGTTTCAAT+TGG | + | chr1_2:77740736-77740755 | None:intergenic | 35.0% | |
GCTATGAATGTATATGGCAT+GGG | - | chr1_2:77740746-77740765 | Msa0094510:intron | 35.0% | |
GCAGAATAGTACTTAGCAAT+GGG | + | chr1_2:77740842-77740861 | None:intergenic | 35.0% | |
AGCAGAATAGTACTTAGCAA+TGG | + | chr1_2:77740843-77740862 | None:intergenic | 35.0% | |
ATTTCGTTTATCAGGATCGA+CGG | - | chr1_2:77740989-77741008 | Msa0094510:CDS | 35.0% | |
ACGGAACAAATAAAGAATCC+TGG | - | chr1_2:77741008-77741027 | Msa0094510:CDS | 35.0% | |
! | AATCCTGGTGAATTTTTCAC+TGG | - | chr1_2:77741023-77741042 | Msa0094510:CDS | 35.0% |
AGGATTGAATATTGCAGACT+AGG | - | chr1_2:77741269-77741288 | Msa0094510:intron | 35.0% | |
GTAATTAAACTCACGTGGTA+AGG | + | chr1_2:77741416-77741435 | None:intergenic | 35.0% | |
! | GATTTTCTATGAGATGGTAG+AGG | + | chr1_2:77741742-77741761 | None:intergenic | 35.0% |
GTTCAAATGTAGACAGAAGA+GGG | + | chr1_2:77741768-77741787 | None:intergenic | 35.0% | |
AGTTCAAATGTAGACAGAAG+AGG | + | chr1_2:77741769-77741788 | None:intergenic | 35.0% | |
AAATTGTTATAGCTAGGGTG+AGG | + | chr1_2:77741918-77741937 | None:intergenic | 35.0% | |
TCATGGTTATAGATAGGTCA+AGG | + | chr1_2:77741964-77741983 | None:intergenic | 35.0% | |
CGGTAATCATGGTTATAGAT+AGG | + | chr1_2:77741970-77741989 | None:intergenic | 35.0% | |
TATAACCATGATTACCGGTA+AGG | - | chr1_2:77741973-77741992 | Msa0094510:CDS | 35.0% | |
TATATCCTTACCGGTAATCA+TGG | + | chr1_2:77741981-77742000 | None:intergenic | 35.0% | |
!!! | TCCTTGGTGCTCTTTTTATA+TGG | - | chr1_2:77742224-77742243 | Msa0094510:CDS | 35.0% |
!! | TCCATATAAAAAGAGCACCA+AGG | + | chr1_2:77742228-77742247 | None:intergenic | 35.0% |
TAGTCCAATCAAGACTATCT+TGG | + | chr1_2:77742267-77742286 | None:intergenic | 35.0% | |
TGTGTTAGGAAGAGTTGAAA+GGG | + | chr1_2:77742302-77742321 | None:intergenic | 35.0% | |
! | TCTTCCTAACACACTTGTTA+TGG | - | chr1_2:77742309-77742328 | Msa0094510:CDS | 35.0% |
!! | CTTCCTAACACACTTGTTAT+GGG | - | chr1_2:77742310-77742329 | Msa0094510:CDS | 35.0% |
ATTCCCATAACAAGTGTGTT+AGG | + | chr1_2:77742316-77742335 | None:intergenic | 35.0% | |
CCATACATAGCTCTTAAAAG+AGG | + | chr1_2:77742340-77742359 | None:intergenic | 35.0% | |
!! | CCTCTTTTAAGAGCTATGTA+TGG | - | chr1_2:77742337-77742356 | Msa0094510:CDS | 35.0% |
TGATTTCTCAGGAAATCTCA+TGG | - | chr1_2:77742360-77742379 | Msa0094510:CDS | 35.0% | |
ATTTCAGCATCAGTTTGAAG+TGG | + | chr1_2:77742550-77742569 | None:intergenic | 35.0% | |
CTTCAAACTGATGCTGAAAT+AGG | - | chr1_2:77742550-77742569 | Msa0094510:intron | 35.0% | |
AGATGGTAAACTTCATGTTG+TGG | - | chr1_2:77742576-77742595 | Msa0094510:intron | 35.0% | |
ACTACTAACTCTATGGTATC+TGG | - | chr1_2:77742610-77742629 | Msa0094510:intron | 35.0% | |
TGGTTAAAACTAGATCCTCT+TGG | + | chr1_2:77742733-77742752 | None:intergenic | 35.0% | |
! | CTATTTGTGTATCCGTGTTT+TGG | + | chr1_2:77742796-77742815 | None:intergenic | 35.0% |
TTCTATGCAATCTTCCAAAG+GGG | - | chr1_2:77742846-77742865 | Msa0094510:intron | 35.0% | |
! | TCTTCGAAATTTGAAGTCCT+CGG | + | chr1_2:77742877-77742896 | None:intergenic | 35.0% |
ATTTCGAAGATGAGACATTG+AGG | - | chr1_2:77742887-77742906 | Msa0094510:intron | 35.0% | |
ATTGAGGATGCATAAGAAGA+GGG | - | chr1_2:77742903-77742922 | Msa0094510:intron | 35.0% | |
AGTGGTGAGTTGTTCAATAA+TGG | - | chr1_2:77742940-77742959 | Msa0094510:intron | 35.0% | |
CACAAAGAAGAAAGATAGCA+TGG | - | chr1_2:77743014-77743033 | Msa0094510:intron | 35.0% | |
!! | TGGTAATGGACCTAATAACA+AGG | - | chr1_2:77743047-77743066 | Msa0094510:intron | 35.0% |
!! | ATGTGCAACTCCTTGTTATT+AGG | + | chr1_2:77743060-77743079 | None:intergenic | 35.0% |
TTAAGATTCCCTTCGGAAAT+AGG | + | chr1_2:77743108-77743127 | None:intergenic | 35.0% | |
! | TGCATGTTTAAGATTCCCTT+CGG | + | chr1_2:77743115-77743134 | None:intergenic | 35.0% |
!!! | AAAGCTGCTTCTACTGATTT+TGG | - | chr1_2:77743141-77743160 | Msa0094510:CDS | 35.0% |
TCATGTGGAACATATTTGGA+AGG | + | chr1_2:77743177-77743196 | None:intergenic | 35.0% | |
GAAAATACCGTTGCATCAAA+AGG | - | chr1_2:77743195-77743214 | Msa0094510:CDS | 35.0% | |
ACGCTAGATTATATAGAACG+AGG | + | chr1_2:77743274-77743293 | None:intergenic | 35.0% | |
AGATCATGTACAAGATTGCA+CGG | + | chr1_2:77743370-77743389 | None:intergenic | 35.0% | |
ATTTCAACATCCCTTTGTCT+AGG | + | chr1_2:77743459-77743478 | None:intergenic | 35.0% | |
ACAAAGGGATGTTGAAATTG+AGG | - | chr1_2:77743461-77743480 | Msa0094510:intron | 35.0% | |
! | GTTTTCTCCAAACCATGATA+AGG | + | chr1_2:77743596-77743615 | None:intergenic | 35.0% |
AAGTCCTATAAGACTTGAGT+AGG | + | chr1_2:77743637-77743656 | None:intergenic | 35.0% | |
! | CAAGTCTTATAGGACTTGTT+TGG | - | chr1_2:77743640-77743659 | Msa0094510:intron | 35.0% |
CAGTTAAGGATTCATGATCA+AGG | + | chr1_2:77743888-77743907 | None:intergenic | 35.0% | |
ATGCACATCATTAGCAGTTA+AGG | + | chr1_2:77743902-77743921 | None:intergenic | 35.0% | |
! | ACGAGTTGCAACATTTTCTA+TGG | - | chr1_2:77744139-77744158 | Msa0094510:intron | 35.0% |
! | CAACATTTTCTATGGCTGTA+AGG | - | chr1_2:77744147-77744166 | Msa0094510:intron | 35.0% |
CTTACATGTTGCAATTGTTC+AGG | - | chr1_2:77744232-77744251 | Msa0094510:intron | 35.0% | |
GTATTCTTTGGCAAACACAA+AGG | + | chr1_2:77744387-77744406 | None:intergenic | 35.0% | |
TGGATGGAGATTGTATTCTT+TGG | + | chr1_2:77744399-77744418 | None:intergenic | 35.0% | |
! | CAGTACTGAGTATATTTGGA+TGG | + | chr1_2:77744415-77744434 | None:intergenic | 35.0% |
CATCCAAATATACTCAGTAC+TGG | - | chr1_2:77744413-77744432 | Msa0094510:intron | 35.0% | |
GAATTTGGTATTTGTGTTGC+AGG | - | chr1_2:77744532-77744551 | Msa0094510:CDS | 35.0% | |
TTGTGTTGCAGGGTTATATT+TGG | - | chr1_2:77744543-77744562 | Msa0094510:CDS | 35.0% | |
ATACTCTACTATGTGCTTCT+TGG | - | chr1_2:77744591-77744610 | Msa0094510:CDS | 35.0% | |
! | ATTATGATGATGTGGCTTCA+AGG | - | chr1_2:77744641-77744660 | Msa0094510:CDS | 35.0% |
! | TTATGATGATGTGGCTTCAA+GGG | - | chr1_2:77744642-77744661 | Msa0094510:CDS | 35.0% |
GGTTCATTCAAACAGATGAA+TGG | - | chr1_2:77744663-77744682 | Msa0094510:CDS | 35.0% | |
CATTCAAACAGATGAATGGA+AGG | - | chr1_2:77744667-77744686 | Msa0094510:CDS | 35.0% | |
!!! | TGCGGTTTGGTTGCAAATTT+TGG | + | chr1_2:77739709-77739728 | None:intergenic | 40.0% |
TTTCTATGTACTCTGCGGTT+TGG | + | chr1_2:77739722-77739741 | None:intergenic | 40.0% | |
GTGTCTTTCTATGTACTCTG+CGG | + | chr1_2:77739727-77739746 | None:intergenic | 40.0% | |
!! | CTTTTGGAGATTTGGGATGA+AGG | + | chr1_2:77739798-77739817 | None:intergenic | 40.0% |
!! | GGTTGTCTCTTTTGGAGATT+TGG | + | chr1_2:77739806-77739825 | None:intergenic | 40.0% |
!!! | GGTTTTGAGGTTGTCTCTTT+TGG | + | chr1_2:77739814-77739833 | None:intergenic | 40.0% |
TTCTCTTAGCAGTTCAGACA+TGG | - | chr1_2:77739874-77739893 | Msa0094510:CDS | 40.0% | |
AGCTCAAGGTTGAAGAAAGA+GGG | + | chr1_2:77739986-77740005 | None:intergenic | 40.0% | |
! | TTCTGGAGAGATAACTTTGG+AGG | - | chr1_2:77740135-77740154 | Msa0094510:CDS | 40.0% |
GTCCATATGTTTCTTGTCTG+TGG | - | chr1_2:77740401-77740420 | Msa0094510:CDS | 40.0% | |
CTCCACAGACAAGAAACATA+TGG | + | chr1_2:77740406-77740425 | None:intergenic | 40.0% | |
TCAGATGCTGTTATGCAAGT+AGG | - | chr1_2:77740696-77740715 | Msa0094510:intron | 40.0% | |
GGCTATGAATGTATATGGCA+TGG | - | chr1_2:77740745-77740764 | Msa0094510:intron | 40.0% | |
!! | TTGATAACTTTTGGCCGTCA+AGG | + | chr1_2:77740970-77740989 | None:intergenic | 40.0% |
CTTCCAGTGAAAAATTCACC+AGG | + | chr1_2:77741029-77741048 | None:intergenic | 40.0% | |
! | CTGGTGAATTTTTCACTGGA+AGG | - | chr1_2:77741027-77741046 | Msa0094510:CDS | 40.0% |
! | GTGAATTTTTCACTGGAAGG+TGG | - | chr1_2:77741030-77741049 | Msa0094510:CDS | 40.0% |
TGTCTAATTGCAGCTCCATT+TGG | - | chr1_2:77741154-77741173 | Msa0094510:intron | 40.0% | |
TCCATGTGGTTCTCGAAATT+CGG | + | chr1_2:77741250-77741269 | None:intergenic | 40.0% | |
GCAATATTCAATCCTCCATG+TGG | + | chr1_2:77741264-77741283 | None:intergenic | 40.0% | |
ATATTGCAGACTAGGAGATG+TGG | - | chr1_2:77741277-77741296 | Msa0094510:intron | 40.0% | |
ACTAGGAGATGTGGAATTTG+TGG | - | chr1_2:77741286-77741305 | Msa0094510:intron | 40.0% | |
ATGCCGACAAACATTGTAGA+AGG | + | chr1_2:77741342-77741361 | None:intergenic | 40.0% | |
! | GGGTTGGATTTTCTATGAGA+TGG | + | chr1_2:77741748-77741767 | None:intergenic | 40.0% |
AAATGTAGACAGAAGAGGGT+TGG | + | chr1_2:77741764-77741783 | None:intergenic | 40.0% | |
TTCACACCAGATCAATGTTC+TGG | - | chr1_2:77742079-77742098 | Msa0094510:CDS | 40.0% | |
CTGCAAAAACAGCGACAAAA+CGG | + | chr1_2:77742111-77742130 | None:intergenic | 40.0% | |
GTGAATCAGCTGCTAAGAAA+TGG | + | chr1_2:77742189-77742208 | None:intergenic | 40.0% | |
GTGTGTTAGGAAGAGTTGAA+AGG | + | chr1_2:77742303-77742322 | None:intergenic | 40.0% | |
GCTATGTATGGTGATTTCTC+AGG | - | chr1_2:77742349-77742368 | Msa0094510:CDS | 40.0% | |
GTTATAGAAGCTGCAGTTTC+AGG | + | chr1_2:77742481-77742500 | None:intergenic | 40.0% | |
! | TCTGACGTTGTTTCGCTTAA+TGG | - | chr1_2:77742517-77742536 | Msa0094510:intron | 40.0% |
GATGCTGAAATAGGTGAAGA+TGG | - | chr1_2:77742559-77742578 | Msa0094510:intron | 40.0% | |
AAACTAGATCCTCTTGGAGT+TGG | + | chr1_2:77742727-77742746 | None:intergenic | 40.0% | |
CATTGAGGATGCATAAGAAG+AGG | - | chr1_2:77742902-77742921 | Msa0094510:intron | 40.0% | |
TTGAGGATGCATAAGAAGAG+GGG | - | chr1_2:77742904-77742923 | Msa0094510:intron | 40.0% | |
GGTGAGTTGTTCAATAATGG+TGG | - | chr1_2:77742943-77742962 | Msa0094510:intron | 40.0% | |
AAAGCATAGGATTTGGAGGA+GGG | + | chr1_2:77742975-77742994 | None:intergenic | 40.0% | |
! | GAACCAGAAAGCATAGGATT+TGG | + | chr1_2:77742982-77743001 | None:intergenic | 40.0% |
! | CTTGTAGAACCAGAAAGCAT+AGG | + | chr1_2:77742988-77743007 | None:intergenic | 40.0% |
AAGAAGAAAGATAGCATGGG+TGG | - | chr1_2:77743018-77743037 | Msa0094510:intron | 40.0% | |
AGGAGTTGCACATGTTTGTT+TGG | - | chr1_2:77743067-77743086 | Msa0094510:intron | 40.0% | |
! | GATGCAACGGTATTTTCATG+TGG | + | chr1_2:77743192-77743211 | None:intergenic | 40.0% |
AGAACATGAGTCCTAGACAA+AGG | - | chr1_2:77743445-77743464 | Msa0094510:intron | 40.0% | |
GAACATGAGTCCTAGACAAA+GGG | - | chr1_2:77743446-77743465 | Msa0094510:intron | 40.0% | |
! | AGTCTTGTCATAACACTTGC+TGG | + | chr1_2:77743570-77743589 | None:intergenic | 40.0% |
GACAAGACTCATCCTTATCA+TGG | - | chr1_2:77743581-77743600 | Msa0094510:intron | 40.0% | |
GACTCATCCTTATCATGGTT+TGG | - | chr1_2:77743586-77743605 | Msa0094510:intron | 40.0% | |
! | AGCATCAGACAGTATTGAGA+TGG | + | chr1_2:77743968-77743987 | None:intergenic | 40.0% |
ATCTCAATACTGTCTGATGC+TGG | - | chr1_2:77743967-77743986 | Msa0094510:intron | 40.0% | |
ACAAGTACCTAGACTGAACA+TGG | + | chr1_2:77744004-77744023 | None:intergenic | 40.0% | |
TGAATATGCAGGTCTGTTCA+TGG | - | chr1_2:77744085-77744104 | Msa0094510:intron | 40.0% | |
TTTCCACATGCAATCAGCTT+AGG | + | chr1_2:77744119-77744138 | None:intergenic | 40.0% | |
! | ACGCATACCAATTGCTATTG+AGG | + | chr1_2:77744204-77744223 | None:intergenic | 40.0% |
TCAATAGCAATTGGTATGCG+TGG | - | chr1_2:77744203-77744222 | Msa0094510:intron | 40.0% | |
ACAAAGGGAACAATACCTTG+GGG | + | chr1_2:77744371-77744390 | None:intergenic | 40.0% | |
CACAAAGGGAACAATACCTT+GGG | + | chr1_2:77744372-77744391 | None:intergenic | 40.0% | |
ACACAAAGGGAACAATACCT+TGG | + | chr1_2:77744373-77744392 | None:intergenic | 40.0% | |
! | CACCCAGTACTGAGTATATT+TGG | + | chr1_2:77744419-77744438 | None:intergenic | 40.0% |
! | GGTGTAGCTGCTTTCTCTAT+AGG | + | chr1_2:77739941-77739960 | None:intergenic | 45.0% |
GAGCTCAAGGTTGAAGAAAG+AGG | + | chr1_2:77739987-77740006 | None:intergenic | 45.0% | |
CTTGTCTGTGGAGATACCTA+TGG | - | chr1_2:77740413-77740432 | Msa0094510:intron | 45.0% | |
GTATATGGCATGGGTGCATA+TGG | - | chr1_2:77740755-77740774 | Msa0094510:intron | 45.0% | |
!! | TTGCAGCTCCATTTGGTTCT+TGG | - | chr1_2:77741161-77741180 | Msa0094510:intron | 45.0% |
!! | AGCTCCATTTGGTTCTTGGA+AGG | - | chr1_2:77741165-77741184 | Msa0094510:intron | 45.0% |
!! | GCTCCATTTGGTTCTTGGAA+GGG | - | chr1_2:77741166-77741185 | Msa0094510:intron | 45.0% |
!! | CTCCATTTGGTTCTTGGAAG+GGG | - | chr1_2:77741167-77741186 | Msa0094510:intron | 45.0% |
TCCGAATTTCGAGAACCACA+TGG | - | chr1_2:77741246-77741265 | Msa0094510:intron | 45.0% | |
GAATTTCGAGAACCACATGG+AGG | - | chr1_2:77741249-77741268 | Msa0094510:intron | 45.0% | |
! | TGGTTTGTCGTGATGACAGT+GGG | - | chr1_2:77741306-77741325 | Msa0094510:CDS | 45.0% |
GACAAACATTGTAGAAGGCC+CGG | + | chr1_2:77741337-77741356 | None:intergenic | 45.0% | |
GGGCCTTCTACAATGTTTGT+CGG | - | chr1_2:77741336-77741355 | Msa0094510:CDS | 45.0% | |
ACTTCCAGAAGCAAGAATGG+AGG | + | chr1_2:77741369-77741388 | None:intergenic | 45.0% | |
! | TCCATTCTTGCTTCTGGAAG+TGG | - | chr1_2:77741368-77741387 | Msa0094510:CDS | 45.0% |
TCCACTTCCAGAAGCAAGAA+TGG | + | chr1_2:77741372-77741391 | None:intergenic | 45.0% | |
AGGCAGTATTCAGTGATCTG+CGG | + | chr1_2:77741636-77741655 | None:intergenic | 45.0% | |
GAAGGAAACATGGCTGAGAA+AGG | + | chr1_2:77741864-77741883 | None:intergenic | 45.0% | |
TAGCATACGGTTCAGTTCGT+TGG | - | chr1_2:77742047-77742066 | Msa0094510:CDS | 45.0% | |
CCACGAGCTTCAAATCTAAC+CGG | - | chr1_2:77742667-77742686 | Msa0094510:intron | 45.0% | |
TCAAGAGAACCAACTCCAAG+AGG | - | chr1_2:77742715-77742734 | Msa0094510:intron | 45.0% | |
!! | CGGCGCTTTACTTTGAAACA+TGG | + | chr1_2:77742770-77742789 | None:intergenic | 45.0% |
!! | GTGTATCCGTGTTTTGGACT+CGG | + | chr1_2:77742790-77742809 | None:intergenic | 45.0% |
! | GAAAGCATAGGATTTGGAGG+AGG | + | chr1_2:77742976-77742995 | None:intergenic | 45.0% |
! | CCAGAAAGCATAGGATTTGG+AGG | + | chr1_2:77742979-77742998 | None:intergenic | 45.0% |
CCTCCAAATCCTATGCTTTC+TGG | - | chr1_2:77742976-77742995 | Msa0094510:intron | 45.0% | |
!! | CTTTCTGGTTCTACAAGTGC+TGG | - | chr1_2:77742991-77743010 | Msa0094510:intron | 45.0% |
AAGAAAGATAGCATGGGTGG+TGG | - | chr1_2:77743021-77743040 | Msa0094510:intron | 45.0% | |
!! | ATGGGTGGTGGAAATGGTAA+TGG | - | chr1_2:77743033-77743052 | Msa0094510:intron | 45.0% |
AGTGCTTCACCTATTTCCGA+AGG | - | chr1_2:77743096-77743115 | Msa0094510:intron | 45.0% | |
GTGCTTCACCTATTTCCGAA+GGG | - | chr1_2:77743097-77743116 | Msa0094510:CDS | 45.0% | |
AAGATTGCACGGACGTTTGA+CGG | + | chr1_2:77743359-77743378 | None:intergenic | 45.0% | |
! | TAGCCAGAAGAAGATGGACT+TGG | - | chr1_2:77743506-77743525 | Msa0094510:intron | 45.0% |
CTTCCAAGTCCATCTTCTTC+TGG | + | chr1_2:77743512-77743531 | None:intergenic | 45.0% | |
! | CAGAAGAAGATGGACTTGGA+AGG | - | chr1_2:77743510-77743529 | Msa0094510:intron | 45.0% |
! | AAGAAGATGGACTTGGAAGG+AGG | - | chr1_2:77743513-77743532 | Msa0094510:intron | 45.0% |
! | CTTGTCATAACACTTGCTGG+AGG | + | chr1_2:77743567-77743586 | None:intergenic | 45.0% |
CTAATGATGTGCATGCATGC+AGG | - | chr1_2:77743908-77743927 | Msa0094510:intron | 45.0% | |
! | ATACTGTCTGATGCTGGTCT+TGG | - | chr1_2:77743973-77743992 | Msa0094510:intron | 45.0% |
ATGGCTGTAAGGTTCTTGAC+CGG | - | chr1_2:77744158-77744177 | Msa0094510:intron | 45.0% | |
AGAAGACACGATCGAGCTCA+AGG | + | chr1_2:77740000-77740019 | None:intergenic | 50.0% | |
CTCGATCGTGTCTTCTGTAG+AGG | - | chr1_2:77740004-77740023 | Msa0094510:intron | 50.0% | |
ATCGTGTCTTCTGTAGAGGC+TGG | - | chr1_2:77740008-77740027 | Msa0094510:intron | 50.0% | |
TGAGAATATGAGGCCCGGAT+TGG | - | chr1_2:77740182-77740201 | Msa0094510:intron | 50.0% | |
GCTCTCTCAAACAGTCTCAC+AGG | - | chr1_2:77740361-77740380 | Msa0094510:CDS | 50.0% | |
GTCTGTGGAGATACCTATGG+AGG | - | chr1_2:77740416-77740435 | Msa0094510:intron | 50.0% | |
CTCCCCTTCCAAGAACCAAA+TGG | + | chr1_2:77741172-77741191 | None:intergenic | 50.0% | |
! | TTGGTTCTTGGAAGGGGAGA+AGG | - | chr1_2:77741173-77741192 | Msa0094510:intron | 50.0% |
! | GTGGTTTGTCGTGATGACAG+TGG | - | chr1_2:77741305-77741324 | Msa0094510:CDS | 50.0% |
CATGCCTCCATTCTTGCTTC+TGG | - | chr1_2:77741362-77741381 | Msa0094510:CDS | 50.0% | |
CATACGGTTCAGTTCGTTGG+TGG | - | chr1_2:77742050-77742069 | Msa0094510:CDS | 50.0% | |
! | CCGGTTAGATTTGAAGCTCG+TGG | + | chr1_2:77742670-77742689 | None:intergenic | 50.0% |
!! | AAAGCGCCGAGTCCAAAACA+CGG | - | chr1_2:77742781-77742800 | Msa0094510:intron | 50.0% |
AGGATGCATAAGAAGAGGGG+AGG | - | chr1_2:77742907-77742926 | Msa0094510:intron | 50.0% | |
GGATGCATAAGAAGAGGGGA+GGG | - | chr1_2:77742908-77742927 | Msa0094510:intron | 50.0% | |
!! | GATAGCATGGGTGGTGGAAA+TGG | - | chr1_2:77743027-77743046 | Msa0094510:intron | 50.0% |
! | AAGATGGACTTGGAAGGAGG+AGG | - | chr1_2:77743516-77743535 | Msa0094510:intron | 50.0% |
! | AGATGGACTTGGAAGGAGGA+GGG | - | chr1_2:77743517-77743536 | Msa0094510:intron | 50.0% |
!! | GTCTGATGCTGGTCTTGGAA+TGG | - | chr1_2:77743978-77743997 | Msa0094510:intron | 50.0% |
GGAATGGCCATGTTCAGTCT+AGG | - | chr1_2:77743994-77744013 | Msa0094510:intron | 50.0% | |
CAGCCTAAGCTGATTGCATG+TGG | - | chr1_2:77744113-77744132 | Msa0094510:intron | 50.0% | |
GCGGCAACCTCAATAGCAAT+TGG | - | chr1_2:77744194-77744213 | Msa0094510:intron | 50.0% | |
CAGCTACACCCCCATCATCA+TGG | - | chr1_2:77739951-77739970 | Msa0094510:intron | 55.0% | |
TGTAGAGGCTGGCAAGCTGT+TGG | - | chr1_2:77740019-77740038 | Msa0094510:intron | 55.0% | |
GGAAGGGGAGAAGGATACGT+AGG | - | chr1_2:77741182-77741201 | Msa0094510:intron | 55.0% | |
GTGATGACAGTGGGAACGTC+CGG | - | chr1_2:77741315-77741334 | Msa0094510:CDS | 55.0% | |
TGATGACAGTGGGAACGTCC+GGG | - | chr1_2:77741316-77741335 | Msa0094510:CDS | 55.0% | |
GTGGTAAGGGCAGACAAAGC+AGG | + | chr1_2:77741402-77741421 | None:intergenic | 55.0% | |
TGCATAAGAAGAGGGGAGGG+AGG | - | chr1_2:77742911-77742930 | Msa0094510:intron | 55.0% | |
! | GATGGACTTGGAAGGAGGAG+GGG | - | chr1_2:77743518-77743537 | Msa0094510:intron | 55.0% |
CTTCCAAAGGGGCTACTCCG+AGG | - | chr1_2:77742857-77742876 | Msa0094510:intron | 60.0% | |
AGTCCTCGGAGTAGCCCCTT+TGG | + | chr1_2:77742863-77742882 | None:intergenic | 60.0% | |
! | AGGGGAGGGAGGAGTATGAG+TGG | - | chr1_2:77742922-77742941 | Msa0094510:intron | 60.0% |
GACCGGTCCAGCTGTGATTG+CGG | - | chr1_2:77744175-77744194 | Msa0094510:intron | 60.0% | |
TGCCGCAATCACAGCTGGAC+CGG | + | chr1_2:77744180-77744199 | None:intergenic | 60.0% | |
GAGGTTGCCGCAATCACAGC+TGG | + | chr1_2:77744185-77744204 | None:intergenic | 60.0% | |
TTGCAGGCTGCACTTCCCCA+AGG | - | chr1_2:77744353-77744372 | Msa0094510:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 77739680 | 77744838 | 77739680 | ID=Msa0094510;Name=Msa0094510 |
chr1_2 | mRNA | 77739680 | 77744838 | 77739680 | ID=Msa0094510-mRNA-1;Parent=Msa0094510;Name=Msa0094510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=90|0.44|0.3|1|0.88|0.9|10|138|764 |
chr1_2 | exon | 77739680 | 77739964 | 77739680 | ID=Msa0094510-mRNA-1:exon:27629;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77740083 | 77740159 | 77740083 | ID=Msa0094510-mRNA-1:exon:27628;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77740261 | 77740422 | 77740261 | ID=Msa0094510-mRNA-1:exon:27627;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77740503 | 77740556 | 77740503 | ID=Msa0094510-mRNA-1:exon:27626;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77740945 | 77741091 | 77740945 | ID=Msa0094510-mRNA-1:exon:27625;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77741302 | 77742523 | 77741302 | ID=Msa0094510-mRNA-1:exon:27624;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77743097 | 77743232 | 77743097 | ID=Msa0094510-mRNA-1:exon:27623;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77743319 | 77743351 | 77743319 | ID=Msa0094510-mRNA-1:exon:27622;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77743470 | 77743515 | 77743470 | ID=Msa0094510-mRNA-1:exon:27621;Parent=Msa0094510-mRNA-1 |
chr1_2 | exon | 77744478 | 77744838 | 77744478 | ID=Msa0094510-mRNA-1:exon:27620;Parent=Msa0094510-mRNA-1 |
chr1_2 | five_prime_UTR | 77744749 | 77744838 | 77744749 | ID=Msa0094510-mRNA-1:five_prime_utr;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77744478 | 77744748 | 77744478 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77743470 | 77743515 | 77743470 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77743319 | 77743351 | 77743319 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77743097 | 77743232 | 77743097 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77741302 | 77742523 | 77741302 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77740945 | 77741091 | 77740945 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77740503 | 77740556 | 77740503 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77740261 | 77740422 | 77740261 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77740083 | 77740159 | 77740083 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | CDS | 77739818 | 77739964 | 77739818 | ID=Msa0094510-mRNA-1:cds;Parent=Msa0094510-mRNA-1 |
chr1_2 | three_prime_UTR | 77739680 | 77739817 | 77739680 | ID=Msa0094510-mRNA-1:three_prime_utr;Parent=Msa0094510-mRNA-1 |
Gene Sequence |
Protein sequence |