Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265840 | XP_003610026.1 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265840 | sp|Q9LU77|PIN2_ARATH | 74.730 | 649 | 138 | 11 | 1 | 625 | 1 | 647 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265840 | Q84YG8 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1272 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012810 | Msa1265840 | 0.800724 | 1.260059e-48 | -8.615850e-47 |
| Msa0047120 | Msa1265840 | 0.938657 | 4.684075e-99 | -8.615850e-47 |
| Msa0059880 | Msa1265840 | 0.801693 | 7.982785e-49 | -8.615850e-47 |
| Msa0094510 | Msa1265840 | 0.931580 | 3.062063e-94 | -8.615850e-47 |
| Msa0840080 | Msa1265840 | 0.802753 | 4.829936e-49 | -8.615850e-47 |
| Msa0212490 | Msa1265840 | 0.802480 | 5.499728e-49 | -8.615850e-47 |
| Msa1265840 | Msa1371870 | 0.802805 | 4.712980e-49 | -8.615850e-47 |
| Msa1265840 | Msa1394340 | 0.937111 | 5.882898e-98 | -8.615850e-47 |
| Msa1157390 | Msa1265840 | 0.803417 | 3.520800e-49 | -8.615850e-47 |
| Msa0854840 | Msa1265840 | 0.804947 | 1.691619e-49 | -8.615850e-47 |
| Msa0910830 | Msa1265840 | 0.805958 | 1.038384e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265840 | MtrunA17_Chr4g0071571 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1272 |
| Msa1265840 | MtrunA17_Chr4g0044181 | 57.372 | 685 | 206 | 15 | 1 | 625 | 1 | 659 | 0.0 | 724 |
| Msa1265840 | MtrunA17_Chr6g0478431 | 59.259 | 648 | 197 | 12 | 1 | 625 | 1 | 604 | 0.0 | 720 |
| Msa1265840 | MtrunA17_Chr7g0255941 | 60.443 | 632 | 202 | 11 | 1 | 625 | 1 | 591 | 0.0 | 696 |
| Msa1265840 | MtrunA17_Chr1g0160461 | 58.168 | 655 | 210 | 12 | 1 | 625 | 1 | 621 | 0.0 | 692 |
| Msa1265840 | MtrunA17_Chr8g0393111 | 53.945 | 621 | 156 | 15 | 1 | 595 | 1 | 517 | 0.0 | 588 |
| Msa1265840 | MtrunA17_Chr1g0159341 | 48.336 | 631 | 216 | 20 | 1 | 625 | 1 | 527 | 1.48e-167 | 488 |
| Msa1265840 | MtrunA17_Chr4g0071551 | 95.327 | 214 | 10 | 0 | 1 | 214 | 1 | 214 | 2.98e-148 | 427 |
| Msa1265840 | MtrunA17_Chr4g0071561 | 61.316 | 380 | 77 | 7 | 228 | 601 | 1 | 316 | 2.56e-144 | 421 |
| Msa1265840 | MtrunA17_Chr2g0298971 | 40.063 | 639 | 226 | 15 | 1 | 604 | 1 | 517 | 1.56e-131 | 395 |
| Msa1265840 | MtrunA17_Chr7g0216571 | 52.451 | 204 | 87 | 2 | 422 | 625 | 174 | 367 | 2.22e-60 | 205 |
| Msa1265840 | MtrunA17_Chr7g0216571 | 54.658 | 161 | 68 | 2 | 1 | 159 | 12 | 169 | 3.35e-48 | 172 |
| Msa1265840 | MtrunA17_Chr6g0452821 | 52.151 | 186 | 89 | 0 | 440 | 625 | 175 | 360 | 5.95e-59 | 201 |
| Msa1265840 | MtrunA17_Chr6g0452821 | 55.696 | 158 | 70 | 0 | 1 | 158 | 1 | 158 | 4.72e-50 | 177 |
| Msa1265840 | MtrunA17_Chr7g0249141 | 45.918 | 196 | 94 | 2 | 435 | 623 | 169 | 359 | 6.34e-53 | 185 |
| Msa1265840 | MtrunA17_Chr7g0249141 | 49.359 | 156 | 78 | 1 | 1 | 156 | 1 | 155 | 1.06e-47 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265840 | AT5G57090.1 | 74.730 | 649 | 138 | 11 | 1 | 625 | 1 | 647 | 0.0 | 935 |
| Msa1265840 | AT5G57090.2 | 72.578 | 547 | 125 | 10 | 103 | 625 | 2 | 547 | 0.0 | 751 |
| Msa1265840 | AT1G70940.1 | 58.234 | 668 | 208 | 14 | 1 | 625 | 1 | 640 | 0.0 | 706 |
| Msa1265840 | AT1G23080.3 | 59.288 | 646 | 211 | 12 | 1 | 625 | 1 | 615 | 0.0 | 704 |
| Msa1265840 | AT1G23080.4 | 59.288 | 646 | 211 | 12 | 1 | 625 | 1 | 615 | 0.0 | 704 |
| Msa1265840 | AT2G01420.2 | 57.935 | 649 | 216 | 12 | 1 | 625 | 1 | 616 | 0.0 | 702 |
| Msa1265840 | AT2G01420.1 | 58.642 | 648 | 209 | 13 | 1 | 625 | 1 | 612 | 0.0 | 701 |
| Msa1265840 | AT1G23080.1 | 58.769 | 650 | 212 | 12 | 1 | 625 | 1 | 619 | 0.0 | 700 |
| Msa1265840 | AT1G73590.1 | 59.259 | 648 | 215 | 14 | 1 | 625 | 1 | 622 | 0.0 | 689 |
| Msa1265840 | AT1G23080.2 | 55.393 | 547 | 192 | 12 | 1 | 526 | 1 | 516 | 0.0 | 549 |
| Msa1265840 | AT2G01420.3 | 54.364 | 550 | 194 | 12 | 1 | 526 | 1 | 517 | 0.0 | 538 |
| Msa1265840 | AT1G77110.1 | 45.820 | 646 | 253 | 15 | 1 | 625 | 1 | 570 | 1.02e-172 | 503 |
| Msa1265840 | AT1G77110.2 | 49.235 | 327 | 130 | 9 | 1 | 306 | 1 | 312 | 4.44e-90 | 290 |
| Msa1265840 | AT1G77110.2 | 69.388 | 147 | 45 | 0 | 457 | 603 | 402 | 548 | 6.41e-61 | 212 |
| Msa1265840 | AT5G15100.1 | 59.877 | 162 | 65 | 0 | 462 | 623 | 204 | 365 | 1.16e-58 | 201 |
| Msa1265840 | AT5G15100.1 | 47.458 | 177 | 84 | 2 | 1 | 173 | 1 | 172 | 3.47e-43 | 159 |
| Msa1265840 | AT5G16530.1 | 53.595 | 153 | 71 | 0 | 471 | 623 | 195 | 347 | 5.48e-52 | 183 |
| Msa1265840 | AT5G16530.1 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 3.91e-50 | 178 |
| Msa1265840 | AT5G16530.2 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 1.24e-50 | 178 |
| Msa1265840 | AT5G16530.2 | 52.985 | 134 | 63 | 0 | 471 | 604 | 195 | 328 | 6.83e-44 | 160 |
Find 147 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 8_2:+70401303 | Msa1265840:CDS |
| AAAGCTGCTTCTACTGATTT+TGG | 0.151528 | 8_2:+70401468 | Msa1265840:CDS |
| GTGGCGTCATATTATTTAAA+TGG | 0.167054 | 8_2:-70400975 | None:intergenic |
| TCTGACGTTGTTTCGCTTAA+TGG | 0.202697 | 8_2:+70400844 | Msa1265840:CDS |
| GTTATAGAAGCTGCAGTTTC+AGG | 0.222137 | 8_2:-70400805 | None:intergenic |
| GAAATGCCATCTATTGTAAA+AGG | 0.235112 | 8_2:+70402267 | Msa1265840:CDS |
| TTTGGTCTCTTGTATCATTT+AGG | 0.244094 | 8_2:+70401985 | Msa1265840:CDS |
| ATAAGACTTGAGTAGGTATT+AGG | 0.244249 | 8_2:-70401954 | None:intergenic |
| CACCCAGTACTGAGTATATT+TGG | 0.250618 | 8_2:-70402743 | None:intergenic |
| AATACCTACTCAAGTCTTAT+AGG | 0.254018 | 8_2:+70401957 | Msa1265840:CDS |
| TTAAGATTCCCTTCGGAAAT+AGG | 0.258413 | 8_2:-70401432 | None:intergenic |
| TTGTGTTGCAGGGTTATATT+TGG | 0.267057 | 8_2:+70402870 | Msa1265840:intron |
| CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 8_2:-70401836 | None:intergenic |
| ATGTGCAACTCCTTGTTATT+AGG | 0.280094 | 8_2:-70401384 | None:intergenic |
| CTATTTGTGTATCCGTGTTT+TGG | 0.282706 | 8_2:-70401120 | None:intergenic |
| TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 8_2:+70400719 | Msa1265840:CDS |
| CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 8_2:+70400877 | Msa1265840:CDS |
| TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 8_2:+70400636 | Msa1265840:CDS |
| GATCATTGGAAGATATAAAA+TGG | 0.291739 | 8_2:-70400474 | None:intergenic |
| ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 8_2:-70401825 | None:intergenic |
| ATACTCTACTATGTGCTTCT+TGG | 0.327447 | 8_2:+70402918 | Msa1265840:CDS |
| AAGATATTGAATTCTATTAG+AGG | 0.331499 | 8_2:+70403032 | Msa1265840:three_prime_UTR |
| CTTACATGTTGCAATTGTTC+AGG | 0.334263 | 8_2:+70402559 | Msa1265840:CDS |
| TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 8_2:-70402723 | None:intergenic |
| CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 8_2:+70400637 | Msa1265840:CDS |
| CACATAGTAGAGTATTGTTA+TGG | 0.345910 | 8_2:-70402910 | None:intergenic |
| TGAATATGCAGGTCTGTTCA+TGG | 0.369728 | 8_2:+70402412 | Msa1265840:intron |
| GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 8_2:-70401306 | None:intergenic |
| AAGATCAACTACTAACTCTA+TGG | 0.372841 | 8_2:+70400930 | Msa1265840:CDS |
| TCTTGGAGTATAATCTATCT+TGG | 0.373259 | 8_2:+70402935 | Msa1265840:exon |
| GACTCATCCTTATCATGGTT+TGG | 0.377147 | 8_2:+70401913 | Msa1265840:CDS |
| GATAGCATGGGTGGTGGAAA+TGG | 0.382932 | 8_2:+70401354 | Msa1265840:CDS |
| CAAGTCTTATAGGACTTGTT+TGG | 0.388260 | 8_2:+70401967 | Msa1265840:CDS |
| AGGAGTTGCACATGTTTGTT+TGG | 0.388483 | 8_2:+70401394 | Msa1265840:CDS |
| ACTACTAACTCTATGGTATC+TGG | 0.400134 | 8_2:+70400937 | Msa1265840:CDS |
| TGGCGTCATATTATTTAAAT+GGG | 0.400508 | 8_2:-70400974 | None:intergenic |
| AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 8_2:+70401844 | Msa1265840:CDS |
| TTCACACCAGATCAATGTTC+TGG | 0.419637 | 8_2:+70400406 | Msa1265840:CDS |
| ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 8_2:-70400640 | None:intergenic |
| ATTCATAGCATAAGGATCAT+TGG | 0.433457 | 8_2:-70400488 | None:intergenic |
| TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 8_2:+70401238 | Msa1265840:CDS |
| CATCCAAATATACTCAGTAC+TGG | 0.436602 | 8_2:+70402740 | Msa1265840:CDS |
| ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 8_2:+70402300 | Msa1265840:CDS |
| AGACCTCGGAGTAGCCCCTT+TGG | 0.441905 | 8_2:-70401187 | None:intergenic |
| AGTCTTGTCATAACACTTGC+TGG | 0.442208 | 8_2:-70401894 | None:intergenic |
| CACAAAGGGAACAATACCTT+GGG | 0.446341 | 8_2:-70402696 | None:intergenic |
| GACAAGACTCATCCTTATCA+TGG | 0.446845 | 8_2:+70401908 | Msa1265840:CDS |
| TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 8_2:-70400626 | None:intergenic |
| AAAACCAAGATAGTCTTGAT+TGG | 0.448110 | 8_2:+70400587 | Msa1265840:CDS |
| AAACTAGATCCTCTTGGAGT+TGG | 0.454124 | 8_2:-70401051 | None:intergenic |
| CTATCTATAACCATGATTAC+CGG | 0.459673 | 8_2:+70400295 | None:intergenic |
| AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 8_2:+70401843 | Msa1265840:CDS |
| ACGCATACCAATTGCTATTG+AGG | 0.461284 | 8_2:-70402528 | None:intergenic |
| GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 8_2:-70400513 | None:intergenic |
| CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 8_2:+70401318 | Msa1265840:CDS |
| AAATGGTAATTCATAGCATA+AGG | 0.463466 | 8_2:-70400496 | None:intergenic |
| TTTCCACATGCAATCAGCTT+AGG | 0.466851 | 8_2:-70402443 | None:intergenic |
| AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 8_2:+70401267 | Msa1265840:CDS |
| CGGCGCTTTACTTTGAAACA+TGG | 0.467403 | 8_2:-70401094 | None:intergenic |
| TGCATGTTTAAGATTCCCTT+CGG | 0.467611 | 8_2:-70401439 | None:intergenic |
| ATTCTATGCAATCTTCCAAA+GGG | 0.470349 | 8_2:+70401172 | Msa1265840:CDS |
| TAGTCCAATCAAGACTATCT+TGG | 0.470572 | 8_2:-70400591 | None:intergenic |
| ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 8_2:+70402294 | Msa1265840:CDS |
| GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 8_2:+70401845 | Msa1265840:CDS |
| GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 8_2:+70402521 | Msa1265840:CDS |
| ACATAGTAGAGTATTGTTAT+GGG | 0.493323 | 8_2:-70402909 | None:intergenic |
| ATTTCAACATCCCTTTGTCT+AGG | 0.495176 | 8_2:-70401783 | None:intergenic |
| ATTATGATGATGTGGCTTCA+AGG | 0.495568 | 8_2:+70402968 | Msa1265840:three_prime_UTR |
| AATATCATAGCAACATATAG+TGG | 0.496035 | 8_2:-70400352 | None:intergenic |
| GAGGTTGCCGCAATCACAGC+TGG | 0.497964 | 8_2:-70402509 | None:intergenic |
| ACAAAGGGATGTTGAAATTG+AGG | 0.498259 | 8_2:+70401788 | Msa1265840:CDS |
| TTTATACCAGAACATTGATC+TGG | 0.498746 | 8_2:-70400412 | None:intergenic |
| GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 8_2:-70400627 | None:intergenic |
| TGCCGCAATCACAGCTGGAC+CGG | 0.500587 | 8_2:-70402504 | None:intergenic |
| TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 8_2:-70402710 | None:intergenic |
| CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 8_2:-70401303 | None:intergenic |
| TGGTTAAAACTAGATCCTCT+TGG | 0.501747 | 8_2:-70401057 | None:intergenic |
| CATACGGTTCAGTTCGTTGG+TGG | 0.502544 | 8_2:+70400377 | Msa1265840:CDS |
| GAAAATACCGTTGCATCAAA+AGG | 0.506036 | 8_2:+70401522 | Msa1265840:CDS |
| ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 8_2:+70401827 | Msa1265840:CDS |
| TATATCCTTACCGGTAATCA+TGG | 0.512246 | 8_2:-70400305 | None:intergenic |
| CCACGAGCTTCAAATCTAAC+CGG | 0.512403 | 8_2:+70400994 | Msa1265840:CDS |
| GGTTCATTCAAACAGATGAA+TGG | 0.513821 | 8_2:+70402990 | Msa1265840:three_prime_UTR |
| TAGCATACGGTTCAGTTCGT+TGG | 0.514377 | 8_2:+70400374 | Msa1265840:CDS |
| GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 8_2:+70401235 | Msa1265840:CDS |
| TTATGATGATGTGGCTTCAA+GGG | 0.517205 | 8_2:+70402969 | Msa1265840:three_prime_UTR |
| CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 8_2:+70401341 | Msa1265840:CDS |
| GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 8_2:+70402305 | Msa1265840:CDS |
| TATTCTATGCAATCTTCCAA+AGG | 0.533077 | 8_2:+70401171 | Msa1265840:CDS |
| TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 8_2:+70401833 | Msa1265840:CDS |
| ATGGGTGGTGGAAATGGTAA+TGG | 0.538764 | 8_2:+70401360 | Msa1265840:CDS |
| AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 8_2:+70401234 | Msa1265840:CDS |
| AACATCGTATATATCCTTAC+CGG | 0.540847 | 8_2:-70400314 | None:intergenic |
| GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 8_2:+70400676 | Msa1265840:CDS |
| AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 8_2:+70401249 | Msa1265840:CDS |
| TCATGTGGAACATATTTGGA+AGG | 0.549434 | 8_2:-70401501 | None:intergenic |
| TATAACCATGATTACCGGTA+AGG | 0.552385 | 8_2:+70400300 | None:intergenic |
| AAGAAAGATAGCATGGGTGG+TGG | 0.552901 | 8_2:+70401348 | Msa1265840:CDS |
| GAACATGAGTCCTAGACAAA+GGG | 0.557185 | 8_2:+70401773 | Msa1265840:CDS |
| TCTTCGAAATTTGAAGACCT+CGG | 0.557299 | 8_2:-70401201 | None:intergenic |
| ACACAAAGGGAACAATACCT+TGG | 0.558237 | 8_2:-70402697 | None:intergenic |
| ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 8_2:-70400874 | None:intergenic |
| ATTGAGGATGCATAAGAAGA+GGG | 0.564904 | 8_2:+70401230 | Msa1265840:CDS |
| AGTGCTTCACCTATTTCCGA+AGG | 0.569824 | 8_2:+70401423 | Msa1265840:CDS |
| GACCGGTCCAGCTGTGATTG+CGG | 0.570068 | 8_2:+70402502 | Msa1265840:CDS |
| ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 8_2:-70400460 | None:intergenic |
| GGAATGGCCATGTTCAGTCT+AGG | 0.576547 | 8_2:+70402321 | Msa1265840:CDS |
| GATGCTGAAATAGGTGAAGA+TGG | 0.576751 | 8_2:+70400886 | Msa1265840:CDS |
| AAGTCCTATAAGACTTGAGT+AGG | 0.579378 | 8_2:-70401961 | None:intergenic |
| ATGGCTGTAAGGTTCTTGAC+CGG | 0.579568 | 8_2:+70402485 | Msa1265840:CDS |
| GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 8_2:-70401300 | None:intergenic |
| ATTTCGAAGATGAGACATTG+AGG | 0.583231 | 8_2:+70401214 | Msa1265840:CDS |
| AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 8_2:-70402292 | None:intergenic |
| CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 8_2:-70400663 | None:intergenic |
| GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 8_2:-70402711 | None:intergenic |
| CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 8_2:-70400664 | None:intergenic |
| GTTGCTATGATATTAGCATA+CGG | 0.591499 | 8_2:+70400361 | Msa1265840:CDS |
| CATTCAAACAGATGAATGGA+AGG | 0.591798 | 8_2:+70402994 | Msa1265840:three_prime_UTR |
| TCAATAGCAATTGGTATGCG+TGG | 0.591915 | 8_2:+70402530 | Msa1265840:CDS |
| CATTGAGGATGCATAAGAAG+AGG | 0.595513 | 8_2:+70401229 | Msa1265840:CDS |
| ATCCAAATATACTCAGTACT+GGG | 0.597499 | 8_2:+70402741 | Msa1265840:CDS |
| CAGTACTGAGTATATTTGGA+TGG | 0.598102 | 8_2:-70402739 | None:intergenic |
| CAGCCTAAGCTGATTGCATG+TGG | 0.600231 | 8_2:+70402440 | Msa1265840:CDS |
| CCGGTTAGATTTGAAGCTCG+TGG | 0.602636 | 8_2:-70400994 | None:intergenic |
| AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 8_2:-70401299 | None:intergenic |
| AGAACATGAGTCCTAGACAA+AGG | 0.609263 | 8_2:+70401772 | Msa1265840:CDS |
| CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 8_2:+70401837 | Msa1265840:CDS |
| AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 8_2:+70401840 | Msa1265840:CDS |
| GCAAATCAATTATGATGATG+TGG | 0.621632 | 8_2:+70402960 | Msa1265840:three_prime_UTR |
| TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 8_2:+70402680 | Msa1265840:intron |
| TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 8_2:+70400687 | Msa1265840:CDS |
| CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 8_2:-70401312 | None:intergenic |
| ACAAGTACCTAGACTGAACA+TGG | 0.632685 | 8_2:-70402328 | None:intergenic |
| GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 8_2:+70401270 | Msa1265840:CDS |
| TCAAGAGAACCAACTCCAAG+AGG | 0.636626 | 8_2:+70401042 | Msa1265840:CDS |
| TTCTATGCAATCTTCCAAAG+GGG | 0.639413 | 8_2:+70401173 | Msa1265840:CDS |
| AGATGGTAAACTTCATGTTG+TGG | 0.647519 | 8_2:+70400903 | Msa1265840:CDS |
| GTGCTTCACCTATTTCCGAA+GGG | 0.647728 | 8_2:+70401424 | Msa1265840:CDS |
| AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 8_2:+70401345 | Msa1265840:CDS |
| TGGTAATGGACCTAATAACA+AGG | 0.666402 | 8_2:+70401374 | Msa1265840:CDS |
| ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 8_2:+70401342 | Msa1265840:CDS |
| TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 8_2:+70401231 | Msa1265840:CDS |
| CTTCCAAAGGGGCTACTCCG+AGG | 0.679359 | 8_2:+70401184 | Msa1265840:CDS |
| AACAGAATATATCTCAACAC+CGG | 0.682527 | 8_2:-70401013 | None:intergenic |
| CTTGTCATAACACTTGCTGG+AGG | 0.701230 | 8_2:-70401891 | None:intergenic |
| AAAGCGCCGAGTCCAAAACA+CGG | 0.735141 | 8_2:+70401108 | Msa1265840:CDS |
| ACAAAGGGAACAATACCTTG+GGG | 0.771870 | 8_2:-70402695 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGCTTATATTTAAAAAA+CGG | - | chr8_2:70402072-70402091 | None:intergenic | 10.0% |
| !!! | TGAAAGTTGATATATTTATA+GGG | - | chr8_2:70401640-70401659 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTGATATATTTAT+AGG | - | chr8_2:70401641-70401660 | None:intergenic | 15.0% |
| !!! | TAATAGATTGAAGATTTTTT+TGG | - | chr8_2:70402035-70402054 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTAGAAA+CGG | + | chr8_2:70402180-70402199 | Msa1265840:intron | 15.0% |
| !!! | AATGTTTAATTTTAATTTGC+AGG | + | chr8_2:70402664-70402683 | Msa1265840:intron | 15.0% |
| !! | TGAAATACTAAAAAAGAATT+TGG | + | chr8_2:70402844-70402863 | Msa1265840:intron | 15.0% |
| !! | ATAAAATGGAAAGATAGTAA+TGG | - | chr8_2:70400463-70400482 | None:intergenic | 20.0% |
| !!! | ACAAATAGTTTTCAAAGTAA+TGG | + | chr8_2:70401135-70401154 | Msa1265840:CDS | 20.0% |
| !!! | ATAAGCAAAATTGACTTTTT+AGG | + | chr8_2:70402082-70402101 | Msa1265840:intron | 20.0% |
| !! | CATTCATTTAATGATGTATT+TGG | + | chr8_2:70402107-70402126 | Msa1265840:intron | 20.0% |
| !!! | ATATTCTCCTAAGAAATTTT+TGG | + | chr8_2:70402364-70402383 | Msa1265840:intron | 20.0% |
| !! | AATTAAGCCAAAAATTTCTT+AGG | - | chr8_2:70402374-70402393 | None:intergenic | 20.0% |
| !!! | ATAATCATTTTTGAATATGC+AGG | + | chr8_2:70402401-70402420 | Msa1265840:intron | 20.0% |
| !! | ATAAGCAACTAATTAGAATA+GGG | - | chr8_2:70402635-70402654 | None:intergenic | 20.0% |
| !! | AATAAGCAACTAATTAGAAT+AGG | - | chr8_2:70402636-70402655 | None:intergenic | 20.0% |
| !! | AAGATATTGAATTCTATTAG+AGG | + | chr8_2:70403032-70403051 | Msa1265840:three_prime_UTR | 20.0% |
| !!! | ATTTTGATTCAAATGAAAGT+TGG | + | chr8_2:70403106-70403125 | Msa1265840:three_prime_UTR | 20.0% |
| !!! | TTTTGATTCAAATGAAAGTT+GGG | + | chr8_2:70403107-70403126 | Msa1265840:three_prime_UTR | 20.0% |
| ! | AATATCATAGCAACATATAG+TGG | - | chr8_2:70400355-70400374 | None:intergenic | 25.0% |
| ! | GATCATTGGAAGATATAAAA+TGG | - | chr8_2:70400477-70400496 | None:intergenic | 25.0% |
| ! | AAATGGTAATTCATAGCATA+AGG | - | chr8_2:70400499-70400518 | None:intergenic | 25.0% |
| ! | TGGCGTCATATTATTTAAAT+GGG | - | chr8_2:70400977-70400996 | None:intergenic | 25.0% |
| !! | AGTTTTCAAAGTAATGGTAA+TGG | + | chr8_2:70401141-70401160 | Msa1265840:CDS | 25.0% |
| !! | ATTTTCATGTGGAACATATT+TGG | - | chr8_2:70401508-70401527 | None:intergenic | 25.0% |
| !! | TTTAATACCTTTTGATGCAA+CGG | - | chr8_2:70401532-70401551 | None:intergenic | 25.0% |
| !!! | TTGAAGATTTTTTTGGAGAT+TGG | - | chr8_2:70402028-70402047 | None:intergenic | 25.0% |
| ! | TGCTTATATTTAAAAAACGG+AGG | - | chr8_2:70402069-70402088 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr8_2:70402146-70402165 | None:intergenic | 25.0% |
| ! | TTCTTAGGAGAATATAATGT+TGG | - | chr8_2:70402359-70402378 | None:intergenic | 25.0% |
| ! | TAAGCAACTAATTAGAATAG+GGG | - | chr8_2:70402634-70402653 | None:intergenic | 25.0% |
| !!! | ACATAGTAGAGTATTGTTAT+GGG | - | chr8_2:70402912-70402931 | None:intergenic | 25.0% |
| AACATCGTATATATCCTTAC+CGG | - | chr8_2:70400317-70400336 | None:intergenic | 30.0% | |
| GTTGCTATGATATTAGCATA+CGG | + | chr8_2:70400361-70400380 | Msa1265840:CDS | 30.0% | |
| TTTATACCAGAACATTGATC+TGG | - | chr8_2:70400415-70400434 | None:intergenic | 30.0% | |
| ATTCATAGCATAAGGATCAT+TGG | - | chr8_2:70400491-70400510 | None:intergenic | 30.0% | |
| CTTCAAAAAGTAGTTATCCT+TGG | + | chr8_2:70400535-70400554 | Msa1265840:CDS | 30.0% | |
| ! | AAAACCAAGATAGTCTTGAT+TGG | + | chr8_2:70400587-70400606 | Msa1265840:CDS | 30.0% |
| CATACATAGCTCTTAAAAGA+GGG | - | chr8_2:70400666-70400685 | None:intergenic | 30.0% | |
| ! | TTGTTCTGCAAAGTGTTATT+TGG | + | chr8_2:70400719-70400738 | Msa1265840:CDS | 30.0% |
| AAGATCAACTACTAACTCTA+TGG | + | chr8_2:70400930-70400949 | Msa1265840:CDS | 30.0% | |
| GTGGCGTCATATTATTTAAA+TGG | - | chr8_2:70400978-70400997 | None:intergenic | 30.0% | |
| AACAGAATATATCTCAACAC+CGG | - | chr8_2:70401016-70401035 | None:intergenic | 30.0% | |
| ACATGGCATAAAAATCAGTT+TGG | - | chr8_2:70401080-70401099 | None:intergenic | 30.0% | |
| TATTCTATGCAATCTTCCAA+AGG | + | chr8_2:70401171-70401190 | Msa1265840:CDS | 30.0% | |
| ATTCTATGCAATCTTCCAAA+GGG | + | chr8_2:70401172-70401191 | Msa1265840:CDS | 30.0% | |
| ACAAAGAAGAAAGATAGCAT+GGG | + | chr8_2:70401342-70401361 | Msa1265840:CDS | 30.0% | |
| ! | ATCTTCTTCTGGCTAATATA+TGG | - | chr8_2:70401828-70401847 | None:intergenic | 30.0% |
| ATATATTAGCCAGAAGAAGA+TGG | + | chr8_2:70401827-70401846 | Msa1265840:CDS | 30.0% | |
| ATAAGACTTGAGTAGGTATT+AGG | - | chr8_2:70401957-70401976 | None:intergenic | 30.0% | |
| ! | AATACCTACTCAAGTCTTAT+AGG | + | chr8_2:70401957-70401976 | Msa1265840:CDS | 30.0% |
| TTTGGTCTCTTGTATCATTT+AGG | + | chr8_2:70401985-70402004 | Msa1265840:CDS | 30.0% | |
| TTGCTTATATTTAGAAACGG+AGG | + | chr8_2:70402183-70402202 | Msa1265840:intron | 30.0% | |
| TGCTTATATTTAGAAACGGA+GGG | + | chr8_2:70402184-70402203 | Msa1265840:intron | 30.0% | |
| GAAATGCCATCTATTGTAAA+AGG | + | chr8_2:70402267-70402286 | Msa1265840:CDS | 30.0% | |
| ! | ATGGAACCTTTTACAATAGA+TGG | - | chr8_2:70402276-70402295 | None:intergenic | 30.0% |
| TATTCTTTGGCAAACACAAA+GGG | - | chr8_2:70402713-70402732 | None:intergenic | 30.0% | |
| ATCCAAATATACTCAGTACT+GGG | + | chr8_2:70402741-70402760 | Msa1265840:CDS | 30.0% | |
| ATTGCAAGTGATTAAGTATG+TGG | + | chr8_2:70402815-70402834 | Msa1265840:intron | 30.0% | |
| AATTTGGTATTTGTGTTGCA+GGG | + | chr8_2:70402860-70402879 | Msa1265840:intron | 30.0% | |
| !! | CACATAGTAGAGTATTGTTA+TGG | - | chr8_2:70402913-70402932 | None:intergenic | 30.0% |
| TCTTGGAGTATAATCTATCT+TGG | + | chr8_2:70402935-70402954 | Msa1265840:exon | 30.0% | |
| ! | GCAAATCAATTATGATGATG+TGG | + | chr8_2:70402960-70402979 | Msa1265840:three_prime_UTR | 30.0% |
| !!! | TCCTTGGTGCTCTTTTTATA+TGG | + | chr8_2:70400551-70400570 | Msa1265840:CDS | 35.0% |
| !! | TCCATATAAAAAGAGCACCA+AGG | - | chr8_2:70400555-70400574 | None:intergenic | 35.0% |
| TAGTCCAATCAAGACTATCT+TGG | - | chr8_2:70400594-70400613 | None:intergenic | 35.0% | |
| TGTGTTAGGAAGAGTTGAAA+GGG | - | chr8_2:70400629-70400648 | None:intergenic | 35.0% | |
| ! | TCTTCCTAACACACTTGTTA+TGG | + | chr8_2:70400636-70400655 | Msa1265840:CDS | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | + | chr8_2:70400637-70400656 | Msa1265840:CDS | 35.0% |
| ATTCCCATAACAAGTGTGTT+AGG | - | chr8_2:70400643-70400662 | None:intergenic | 35.0% | |
| CCATACATAGCTCTTAAAAG+AGG | - | chr8_2:70400667-70400686 | None:intergenic | 35.0% | |
| !! | CCTCTTTTAAGAGCTATGTA+TGG | + | chr8_2:70400664-70400683 | Msa1265840:CDS | 35.0% |
| TGATTTCTCAGGAAATCTCA+TGG | + | chr8_2:70400687-70400706 | Msa1265840:CDS | 35.0% | |
| ATTTCAGCATCAGTTTGAAG+TGG | - | chr8_2:70400877-70400896 | None:intergenic | 35.0% | |
| CTTCAAACTGATGCTGAAAT+AGG | + | chr8_2:70400877-70400896 | Msa1265840:CDS | 35.0% | |
| AGATGGTAAACTTCATGTTG+TGG | + | chr8_2:70400903-70400922 | Msa1265840:CDS | 35.0% | |
| ACTACTAACTCTATGGTATC+TGG | + | chr8_2:70400937-70400956 | Msa1265840:CDS | 35.0% | |
| TGGTTAAAACTAGATCCTCT+TGG | - | chr8_2:70401060-70401079 | None:intergenic | 35.0% | |
| ! | CTATTTGTGTATCCGTGTTT+TGG | - | chr8_2:70401123-70401142 | None:intergenic | 35.0% |
| TTCTATGCAATCTTCCAAAG+GGG | + | chr8_2:70401173-70401192 | Msa1265840:CDS | 35.0% | |
| TCTTCGAAATTTGAAGACCT+CGG | - | chr8_2:70401204-70401223 | None:intergenic | 35.0% | |
| ATTTCGAAGATGAGACATTG+AGG | + | chr8_2:70401214-70401233 | Msa1265840:CDS | 35.0% | |
| ATTGAGGATGCATAAGAAGA+GGG | + | chr8_2:70401230-70401249 | Msa1265840:CDS | 35.0% | |
| AGTGGTGAGTTGTTCAATAA+TGG | + | chr8_2:70401267-70401286 | Msa1265840:CDS | 35.0% | |
| CACAAAGAAGAAAGATAGCA+TGG | + | chr8_2:70401341-70401360 | Msa1265840:CDS | 35.0% | |
| !! | TGGTAATGGACCTAATAACA+AGG | + | chr8_2:70401374-70401393 | Msa1265840:CDS | 35.0% |
| !! | ATGTGCAACTCCTTGTTATT+AGG | - | chr8_2:70401387-70401406 | None:intergenic | 35.0% |
| TTAAGATTCCCTTCGGAAAT+AGG | - | chr8_2:70401435-70401454 | None:intergenic | 35.0% | |
| ! | TGCATGTTTAAGATTCCCTT+CGG | - | chr8_2:70401442-70401461 | None:intergenic | 35.0% |
| !!! | AAAGCTGCTTCTACTGATTT+TGG | + | chr8_2:70401468-70401487 | Msa1265840:CDS | 35.0% |
| TCATGTGGAACATATTTGGA+AGG | - | chr8_2:70401504-70401523 | None:intergenic | 35.0% | |
| GAAAATACCGTTGCATCAAA+AGG | + | chr8_2:70401522-70401541 | Msa1265840:CDS | 35.0% | |
| ACGCTAGATTATATAGAACG+AGG | - | chr8_2:70401601-70401620 | None:intergenic | 35.0% | |
| AGATCATGTACAAGATTGCA+CGG | - | chr8_2:70401697-70401716 | None:intergenic | 35.0% | |
| ATTTCAACATCCCTTTGTCT+AGG | - | chr8_2:70401786-70401805 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTGAAATTG+AGG | + | chr8_2:70401788-70401807 | Msa1265840:CDS | 35.0% | |
| ! | GTTTTCTCCAAACCATGATA+AGG | - | chr8_2:70401923-70401942 | None:intergenic | 35.0% |
| AAGTCCTATAAGACTTGAGT+AGG | - | chr8_2:70401964-70401983 | None:intergenic | 35.0% | |
| ! | CAAGTCTTATAGGACTTGTT+TGG | + | chr8_2:70401967-70401986 | Msa1265840:CDS | 35.0% |
| CAGTTAAGGATTCATGATCA+AGG | - | chr8_2:70402215-70402234 | None:intergenic | 35.0% | |
| ATGCACATCATTAGCAGTTA+AGG | - | chr8_2:70402229-70402248 | None:intergenic | 35.0% | |
| ! | ACGAGTTGCAACATTTTCTA+TGG | + | chr8_2:70402466-70402485 | Msa1265840:CDS | 35.0% |
| ! | CAACATTTTCTATGGCTGTA+AGG | + | chr8_2:70402474-70402493 | Msa1265840:CDS | 35.0% |
| CTTACATGTTGCAATTGTTC+AGG | + | chr8_2:70402559-70402578 | Msa1265840:CDS | 35.0% | |
| GTATTCTTTGGCAAACACAA+AGG | - | chr8_2:70402714-70402733 | None:intergenic | 35.0% | |
| TGGATGGAGATTGTATTCTT+TGG | - | chr8_2:70402726-70402745 | None:intergenic | 35.0% | |
| ! | CAGTACTGAGTATATTTGGA+TGG | - | chr8_2:70402742-70402761 | None:intergenic | 35.0% |
| CATCCAAATATACTCAGTAC+TGG | + | chr8_2:70402740-70402759 | Msa1265840:CDS | 35.0% | |
| GAATTTGGTATTTGTGTTGC+AGG | + | chr8_2:70402859-70402878 | Msa1265840:intron | 35.0% | |
| TTGTGTTGCAGGGTTATATT+TGG | + | chr8_2:70402870-70402889 | Msa1265840:intron | 35.0% | |
| ATACTCTACTATGTGCTTCT+TGG | + | chr8_2:70402918-70402937 | Msa1265840:CDS | 35.0% | |
| ! | ATTATGATGATGTGGCTTCA+AGG | + | chr8_2:70402968-70402987 | Msa1265840:three_prime_UTR | 35.0% |
| ! | TTATGATGATGTGGCTTCAA+GGG | + | chr8_2:70402969-70402988 | Msa1265840:three_prime_UTR | 35.0% |
| GGTTCATTCAAACAGATGAA+TGG | + | chr8_2:70402990-70403009 | Msa1265840:three_prime_UTR | 35.0% | |
| CATTCAAACAGATGAATGGA+AGG | + | chr8_2:70402994-70403013 | Msa1265840:three_prime_UTR | 35.0% | |
| TTCACACCAGATCAATGTTC+TGG | + | chr8_2:70400406-70400425 | Msa1265840:CDS | 40.0% | |
| CTGCAAAAACAGCGACAAAA+CGG | - | chr8_2:70400438-70400457 | None:intergenic | 40.0% | |
| GTGAATCAGCTGCTAAGAAA+TGG | - | chr8_2:70400516-70400535 | None:intergenic | 40.0% | |
| GTGTGTTAGGAAGAGTTGAA+AGG | - | chr8_2:70400630-70400649 | None:intergenic | 40.0% | |
| GCTATGTATGGTGATTTCTC+AGG | + | chr8_2:70400676-70400695 | Msa1265840:CDS | 40.0% | |
| GTTATAGAAGCTGCAGTTTC+AGG | - | chr8_2:70400808-70400827 | None:intergenic | 40.0% | |
| ! | TCTGACGTTGTTTCGCTTAA+TGG | + | chr8_2:70400844-70400863 | Msa1265840:CDS | 40.0% |
| GATGCTGAAATAGGTGAAGA+TGG | + | chr8_2:70400886-70400905 | Msa1265840:CDS | 40.0% | |
| AAACTAGATCCTCTTGGAGT+TGG | - | chr8_2:70401054-70401073 | None:intergenic | 40.0% | |
| CATTGAGGATGCATAAGAAG+AGG | + | chr8_2:70401229-70401248 | Msa1265840:CDS | 40.0% | |
| TTGAGGATGCATAAGAAGAG+GGG | + | chr8_2:70401231-70401250 | Msa1265840:CDS | 40.0% | |
| GGTGAGTTGTTCAATAATGG+TGG | + | chr8_2:70401270-70401289 | Msa1265840:CDS | 40.0% | |
| AAAGCATAGGATTTGGAGGA+GGG | - | chr8_2:70401302-70401321 | None:intergenic | 40.0% | |
| ! | GAACCAGAAAGCATAGGATT+TGG | - | chr8_2:70401309-70401328 | None:intergenic | 40.0% |
| ! | CTTGTAGAACCAGAAAGCAT+AGG | - | chr8_2:70401315-70401334 | None:intergenic | 40.0% |
| AAGAAGAAAGATAGCATGGG+TGG | + | chr8_2:70401345-70401364 | Msa1265840:CDS | 40.0% | |
| AGGAGTTGCACATGTTTGTT+TGG | + | chr8_2:70401394-70401413 | Msa1265840:CDS | 40.0% | |
| ! | GATGCAACGGTATTTTCATG+TGG | - | chr8_2:70401519-70401538 | None:intergenic | 40.0% |
| AGAACATGAGTCCTAGACAA+AGG | + | chr8_2:70401772-70401791 | Msa1265840:CDS | 40.0% | |
| GAACATGAGTCCTAGACAAA+GGG | + | chr8_2:70401773-70401792 | Msa1265840:CDS | 40.0% | |
| ! | AGTCTTGTCATAACACTTGC+TGG | - | chr8_2:70401897-70401916 | None:intergenic | 40.0% |
| GACAAGACTCATCCTTATCA+TGG | + | chr8_2:70401908-70401927 | Msa1265840:CDS | 40.0% | |
| GACTCATCCTTATCATGGTT+TGG | + | chr8_2:70401913-70401932 | Msa1265840:CDS | 40.0% | |
| ! | AGCATCAGACAGTATTGAGA+TGG | - | chr8_2:70402295-70402314 | None:intergenic | 40.0% |
| ATCTCAATACTGTCTGATGC+TGG | + | chr8_2:70402294-70402313 | Msa1265840:CDS | 40.0% | |
| ACAAGTACCTAGACTGAACA+TGG | - | chr8_2:70402331-70402350 | None:intergenic | 40.0% | |
| TGAATATGCAGGTCTGTTCA+TGG | + | chr8_2:70402412-70402431 | Msa1265840:intron | 40.0% | |
| TTTCCACATGCAATCAGCTT+AGG | - | chr8_2:70402446-70402465 | None:intergenic | 40.0% | |
| ! | ACGCATACCAATTGCTATTG+AGG | - | chr8_2:70402531-70402550 | None:intergenic | 40.0% |
| TCAATAGCAATTGGTATGCG+TGG | + | chr8_2:70402530-70402549 | Msa1265840:CDS | 40.0% | |
| ACAAAGGGAACAATACCTTG+GGG | - | chr8_2:70402698-70402717 | None:intergenic | 40.0% | |
| CACAAAGGGAACAATACCTT+GGG | - | chr8_2:70402699-70402718 | None:intergenic | 40.0% | |
| ACACAAAGGGAACAATACCT+TGG | - | chr8_2:70402700-70402719 | None:intergenic | 40.0% | |
| ! | CACCCAGTACTGAGTATATT+TGG | - | chr8_2:70402746-70402765 | None:intergenic | 40.0% |
| TAGCATACGGTTCAGTTCGT+TGG | + | chr8_2:70400374-70400393 | Msa1265840:CDS | 45.0% | |
| CCACGAGCTTCAAATCTAAC+CGG | + | chr8_2:70400994-70401013 | Msa1265840:CDS | 45.0% | |
| TCAAGAGAACCAACTCCAAG+AGG | + | chr8_2:70401042-70401061 | Msa1265840:CDS | 45.0% | |
| !! | CGGCGCTTTACTTTGAAACA+TGG | - | chr8_2:70401097-70401116 | None:intergenic | 45.0% |
| !! | GTGTATCCGTGTTTTGGACT+CGG | - | chr8_2:70401117-70401136 | None:intergenic | 45.0% |
| ! | GAAAGCATAGGATTTGGAGG+AGG | - | chr8_2:70401303-70401322 | None:intergenic | 45.0% |
| ! | CCAGAAAGCATAGGATTTGG+AGG | - | chr8_2:70401306-70401325 | None:intergenic | 45.0% |
| CCTCCAAATCCTATGCTTTC+TGG | + | chr8_2:70401303-70401322 | Msa1265840:CDS | 45.0% | |
| !! | CTTTCTGGTTCTACAAGTGC+TGG | + | chr8_2:70401318-70401337 | Msa1265840:CDS | 45.0% |
| AAGAAAGATAGCATGGGTGG+TGG | + | chr8_2:70401348-70401367 | Msa1265840:CDS | 45.0% | |
| !! | ATGGGTGGTGGAAATGGTAA+TGG | + | chr8_2:70401360-70401379 | Msa1265840:CDS | 45.0% |
| AGTGCTTCACCTATTTCCGA+AGG | + | chr8_2:70401423-70401442 | Msa1265840:CDS | 45.0% | |
| GTGCTTCACCTATTTCCGAA+GGG | + | chr8_2:70401424-70401443 | Msa1265840:CDS | 45.0% | |
| AAGATTGCACGGACGTTTGA+CGG | - | chr8_2:70401686-70401705 | None:intergenic | 45.0% | |
| ! | TAGCCAGAAGAAGATGGACT+TGG | + | chr8_2:70401833-70401852 | Msa1265840:CDS | 45.0% |
| CTTCCAAGTCCATCTTCTTC+TGG | - | chr8_2:70401839-70401858 | None:intergenic | 45.0% | |
| ! | CAGAAGAAGATGGACTTGGA+AGG | + | chr8_2:70401837-70401856 | Msa1265840:CDS | 45.0% |
| ! | AAGAAGATGGACTTGGAAGG+AGG | + | chr8_2:70401840-70401859 | Msa1265840:CDS | 45.0% |
| ! | CTTGTCATAACACTTGCTGG+AGG | - | chr8_2:70401894-70401913 | None:intergenic | 45.0% |
| CTAATGATGTGCATGCATGC+AGG | + | chr8_2:70402235-70402254 | Msa1265840:intron | 45.0% | |
| ! | ATACTGTCTGATGCTGGTCT+TGG | + | chr8_2:70402300-70402319 | Msa1265840:CDS | 45.0% |
| ATGGCTGTAAGGTTCTTGAC+CGG | + | chr8_2:70402485-70402504 | Msa1265840:CDS | 45.0% | |
| CATACGGTTCAGTTCGTTGG+TGG | + | chr8_2:70400377-70400396 | Msa1265840:CDS | 50.0% | |
| ! | CCGGTTAGATTTGAAGCTCG+TGG | - | chr8_2:70400997-70401016 | None:intergenic | 50.0% |
| !! | AAAGCGCCGAGTCCAAAACA+CGG | + | chr8_2:70401108-70401127 | Msa1265840:CDS | 50.0% |
| AGGATGCATAAGAAGAGGGG+AGG | + | chr8_2:70401234-70401253 | Msa1265840:CDS | 50.0% | |
| GGATGCATAAGAAGAGGGGA+GGG | + | chr8_2:70401235-70401254 | Msa1265840:CDS | 50.0% | |
| !! | GATAGCATGGGTGGTGGAAA+TGG | + | chr8_2:70401354-70401373 | Msa1265840:CDS | 50.0% |
| ! | AAGATGGACTTGGAAGGAGG+AGG | + | chr8_2:70401843-70401862 | Msa1265840:CDS | 50.0% |
| ! | AGATGGACTTGGAAGGAGGA+GGG | + | chr8_2:70401844-70401863 | Msa1265840:CDS | 50.0% |
| !! | GTCTGATGCTGGTCTTGGAA+TGG | + | chr8_2:70402305-70402324 | Msa1265840:CDS | 50.0% |
| GGAATGGCCATGTTCAGTCT+AGG | + | chr8_2:70402321-70402340 | Msa1265840:CDS | 50.0% | |
| CAGCCTAAGCTGATTGCATG+TGG | + | chr8_2:70402440-70402459 | Msa1265840:CDS | 50.0% | |
| GCGGCAACCTCAATAGCAAT+TGG | + | chr8_2:70402521-70402540 | Msa1265840:CDS | 50.0% | |
| TGCATAAGAAGAGGGGAGGG+AGG | + | chr8_2:70401238-70401257 | Msa1265840:CDS | 55.0% | |
| ! | GATGGACTTGGAAGGAGGAG+GGG | + | chr8_2:70401845-70401864 | Msa1265840:CDS | 55.0% |
| CTTCCAAAGGGGCTACTCCG+AGG | + | chr8_2:70401184-70401203 | Msa1265840:CDS | 60.0% | |
| AGACCTCGGAGTAGCCCCTT+TGG | - | chr8_2:70401190-70401209 | None:intergenic | 60.0% | |
| ! | AGGGGAGGGAGGAGTATGAG+TGG | + | chr8_2:70401249-70401268 | Msa1265840:CDS | 60.0% |
| GACCGGTCCAGCTGTGATTG+CGG | + | chr8_2:70402502-70402521 | Msa1265840:CDS | 60.0% | |
| TGCCGCAATCACAGCTGGAC+CGG | - | chr8_2:70402507-70402526 | None:intergenic | 60.0% | |
| GAGGTTGCCGCAATCACAGC+TGG | - | chr8_2:70402512-70402531 | None:intergenic | 60.0% | |
| TTGCAGGCTGCACTTCCCCA+AGG | + | chr8_2:70402680-70402699 | Msa1265840:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 70400307 | 70403165 | 70400307 | ID=Msa1265840;Name=Msa1265840 |
| chr8_2 | mRNA | 70400307 | 70403165 | 70400307 | ID=Msa1265840-mRNA-1;Parent=Msa1265840;Name=Msa1265840-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|1|0.83|1|1|1|6|218|625 |
| chr8_2 | exon | 70400307 | 70401543 | 70400307 | ID=Msa1265840-mRNA-1:exon:23382;Parent=Msa1265840-mRNA-1 |
| chr8_2 | exon | 70401754 | 70402006 | 70401754 | ID=Msa1265840-mRNA-1:exon:23383;Parent=Msa1265840-mRNA-1 |
| chr8_2 | exon | 70402257 | 70402342 | 70402257 | ID=Msa1265840-mRNA-1:exon:23384;Parent=Msa1265840-mRNA-1 |
| chr8_2 | exon | 70402423 | 70402580 | 70402423 | ID=Msa1265840-mRNA-1:exon:23385;Parent=Msa1265840-mRNA-1 |
| chr8_2 | exon | 70402686 | 70402762 | 70402686 | ID=Msa1265840-mRNA-1:exon:23386;Parent=Msa1265840-mRNA-1 |
| chr8_2 | exon | 70402881 | 70403165 | 70402881 | ID=Msa1265840-mRNA-1:exon:23387;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70400307 | 70401543 | 70400307 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70401754 | 70402006 | 70401754 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70402257 | 70402342 | 70402257 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70402423 | 70402580 | 70402423 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70402686 | 70402762 | 70402686 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | CDS | 70402881 | 70402947 | 70402881 | ID=Msa1265840-mRNA-1:cds;Parent=Msa1265840-mRNA-1 |
| chr8_2 | three_prime_UTR | 70402948 | 70403165 | 70402948 | ID=Msa1265840-mRNA-1:three_prime_utr;Parent=Msa1265840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
