AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0100990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100990 MtrunA17_Chr1g0149351 97.667 643 15 0 1 643 1 643 0.0 1262
Msa0100990 MtrunA17_Chr3g0137771 66.202 645 210 4 1 642 1 640 0.0 837
Msa0100990 MtrunA17_Chr4g0063841 61.066 619 231 4 29 643 21 633 0.0 702
Msa0100990 MtrunA17_Chr4g0063861 57.949 390 163 1 254 643 2 390 8.64e-151 441
Msa0100990 MtrunA17_Chr4g0063861 23.399 406 254 10 180 557 6 382 1.12e-16 82.4
Msa0100990 MtrunA17_Chr4g0063851 63.014 146 49 1 35 180 30 170 1.80e-50 174
Msa0100990 MtrunA17_Chr2g0286991 27.258 598 370 17 68 633 11 575 1.48e-39 154
Msa0100990 MtrunA17_Chr2g0286991 27.536 414 260 11 145 558 205 578 4.62e-28 119
Msa0100990 MtrunA17_Chr2g0286991 28.409 264 180 4 145 408 334 588 5.83e-25 109
Msa0100990 MtrunA17_Chr4g0004901 29.505 505 294 21 129 606 162 631 2.52e-30 127
Msa0100990 MtrunA17_Chr4g0004901 28.926 363 218 10 154 513 343 668 6.18e-29 122
Msa0100990 MtrunA17_Chr4g0004901 26.048 334 213 11 321 628 124 449 5.31e-14 75.5
Msa0100990 MtrunA17_Chr7g0272131 29.478 441 274 13 191 606 186 614 1.50e-28 121
Msa0100990 MtrunA17_Chr7g0272131 26.898 461 274 14 205 611 92 543 1.26e-22 102
Msa0100990 MtrunA17_Chr7g0272131 28.745 247 171 4 176 422 350 591 1.48e-19 93.2
Msa0100990 MtrunA17_Chr7g0272131 24.279 416 255 12 176 544 273 675 5.62e-18 88.2
Msa0100990 MtrunA17_Chr7g0272131 27.273 264 179 6 174 433 399 653 1.14e-17 87.0
Msa0100990 MtrunA17_Chr1g0212071 26.913 379 255 8 66 436 18 382 5.00e-27 114
Msa0100990 MtrunA17_Chr1g0212071 28.968 252 171 4 142 391 145 390 4.81e-20 93.2
Msa0100990 MtrunA17_Chr1g0212071 25.625 320 206 8 252 569 93 382 9.18e-20 92.4
Msa0100990 MtrunA17_Chr1g0212071 25.143 350 195 7 202 518 95 410 2.23e-19 91.3
Msa0100990 MtrunA17_Chr1g0212071 29.050 179 124 3 455 632 110 286 2.87e-13 72.4
Msa0100990 MtrunA17_Chr8g0347711 28.184 369 234 7 63 417 10 361 2.05e-24 105
Msa0100990 MtrunA17_Chr8g0347711 28.000 300 185 8 360 635 75 367 7.69e-17 83.2
Msa0100990 MtrunA17_Chr4g0008501 22.991 448 296 14 166 588 145 568 3.42e-20 95.1
Msa0100990 MtrunA17_Chr3g0125671 29.474 190 107 2 210 399 123 285 5.18e-19 89.4
Msa0100990 MtrunA17_Chr3g0125671 34.066 91 60 0 174 264 192 282 7.29e-11 64.3
Msa0100990 MtrunA17_Chr1g0159531 26.577 222 124 3 204 413 105 299 5.05e-18 86.3
Msa0100990 MtrunA17_Chr1g0159531 27.751 209 140 2 180 377 107 315 1.57e-14 75.5
Msa0100990 MtrunA17_Chr1g0159531 26.866 201 108 3 143 307 128 325 8.57e-12 67.0
Msa0100990 MtrunA17_Chr1g0150971 25.666 413 237 15 188 582 339 699 7.97e-18 88.2
Msa0100990 MtrunA17_Chr4g0002671 23.451 597 353 17 65 609 3 547 9.80e-17 84.0
Msa0100990 MtrunA17_Chr1g0176031 22.830 311 176 5 228 533 92 343 8.76e-16 79.3
Msa0100990 MtrunA17_Chr1g0176031 27.907 301 196 12 336 634 58 339 7.88e-15 76.6
Msa0100990 MtrunA17_Chr1g0176031 29.208 202 137 5 174 374 120 316 1.31e-14 75.9
Msa0100990 MtrunA17_Chr1g0176031 25.820 244 169 7 319 558 79 314 1.84e-14 75.5
Msa0100990 MtrunA17_Chr1g0176031 24.275 276 195 6 191 457 81 351 9.50e-12 67.0
Msa0100990 MtrunA17_Chr5g0432971 22.660 406 264 9 216 609 199 566 1.65e-14 77.0
Msa0100990 MtrunA17_Chr4g0018891 25.843 356 200 13 202 555 189 482 6.69e-14 74.7
Msa0100990 MtrunA17_Chr1g0150991 25.657 495 281 20 162 633 158 588 6.93e-14 75.1
Msa0100990 MtrunA17_Chr5g0446541 22.081 471 298 15 176 609 145 583 7.67e-13 71.6
Msa0100990 MtrunA17_Chr4g0053361 24.070 457 281 16 66 506 44 450 2.27e-12 70.1
Msa0100990 MtrunA17_Chr4g0053361 24.691 405 232 14 224 620 116 455 3.49e-11 66.2
Msa0100990 MtrunA17_Chr1g0152951 23.729 295 199 9 201 484 137 416 5.58e-12 68.6
Msa0100990 MtrunA17_Chr3g0077831 22.571 350 217 10 202 541 192 497 1.23e-11 67.8
Msa0100990 MtrunA17_Chr4g0073771 30.168 179 109 6 229 405 102 266 1.35e-11 65.9
Msa0100990 MtrunA17_Chr1g0211631 24.066 241 151 4 174 412 296 506 1.46e-11 67.4
Msa0100990 MtrunA17_Chr4g0070541 25.090 279 195 8 346 618 397 667 1.77e-11 67.4
Msa0100990 MtrunA17_Chr3g0079141 24.419 430 270 19 68 485 64 450 7.28e-11 65.1
Msa0100990 MtrunA17_Chr4g0009861 28.169 142 80 1 172 291 165 306 8.08e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100990 AT2G25490.1 60.836 646 232 8 1 643 1 628 0.0 770
Msa0100990 AT5G25350.1 58.540 644 243 8 1 642 1 622 0.0 697
Msa0100990 AT4G15475.1 29.289 577 374 19 68 642 11 555 1.87e-46 174
Msa0100990 AT4G15475.1 26.471 340 241 4 125 460 252 586 4.15e-31 129
Msa0100990 AT4G15475.1 26.166 386 245 10 145 503 205 577 7.93e-26 112
Msa0100990 AT5G27920.1 26.177 531 331 16 152 631 82 602 6.39e-30 125
Msa0100990 AT5G27920.1 24.270 445 278 14 217 609 67 504 1.68e-19 93.2
Msa0100990 AT5G23340.1 26.780 295 185 4 306 599 85 349 2.66e-25 109
Msa0100990 AT5G23340.1 23.967 363 266 5 66 426 8 362 1.05e-22 101
Msa0100990 AT5G23340.1 25.281 356 220 8 175 521 84 402 7.84e-18 86.7
Msa0100990 AT5G01720.1 27.397 511 284 16 176 610 85 584 3.94e-23 104
Msa0100990 AT5G01720.1 26.882 372 207 10 129 500 274 580 4.96e-21 98.2
Msa0100990 AT5G01720.1 26.923 208 117 5 176 381 444 618 3.20e-14 76.6
Msa0100990 AT5G01720.1 27.301 326 227 9 307 632 61 376 1.37e-12 71.2
Msa0100990 AT1G21410.2 25.305 328 161 8 204 531 106 349 2.38e-19 90.5
Msa0100990 AT1G21410.2 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0100990 AT1G21410.2 23.256 215 148 2 180 377 108 322 4.64e-13 71.6
Msa0100990 AT1G21410.1 25.305 328 161 8 204 531 106 349 2.38e-19 90.5
Msa0100990 AT1G21410.1 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0100990 AT1G21410.1 23.256 215 148 2 180 377 108 322 4.64e-13 71.6
Msa0100990 AT1G77000.2 29.082 196 112 2 204 399 106 274 1.94e-18 87.8
Msa0100990 AT1G77000.2 25.641 234 140 4 180 379 108 341 8.48e-15 77.0
Msa0100990 AT1G77000.1 29.082 196 112 2 204 399 106 274 1.94e-18 87.8
Msa0100990 AT1G77000.1 25.641 234 140 4 180 379 108 341 8.48e-15 77.0
Msa0100990 AT4G33210.1 23.830 470 265 16 131 570 289 695 5.79e-17 85.9
Msa0100990 AT3G07550.1 23.823 361 263 6 58 413 8 361 7.91e-16 80.5
Msa0100990 AT3G07550.1 24.367 316 196 8 193 500 62 342 2.04e-12 69.7
Msa0100990 AT3G07550.1 28.094 299 169 9 348 641 118 375 1.11e-11 67.8
Msa0100990 AT3G07550.2 23.823 361 263 6 58 413 8 361 7.91e-16 80.5
Msa0100990 AT3G07550.2 24.367 316 196 8 193 500 62 342 2.04e-12 69.7
Msa0100990 AT3G07550.2 28.094 299 169 9 348 641 118 375 1.11e-11 67.8
Msa0100990 AT3G58530.1 25.095 263 155 9 180 439 128 351 2.88e-15 78.2
Msa0100990 AT3G58530.1 27.090 299 177 10 347 638 81 345 5.75e-15 77.4
Msa0100990 AT3G58530.1 21.283 343 207 6 193 530 58 342 8.74e-15 76.6
Msa0100990 AT3G07550.3 23.596 356 243 6 58 413 8 334 1.71e-14 75.9
Msa0100990 AT3G07550.3 24.042 287 182 7 215 500 64 315 4.76e-12 68.6
Msa0100990 AT3G07550.3 28.094 299 169 9 348 641 91 348 7.73e-12 67.8
Msa0100990 AT1G80630.1 23.383 402 235 9 200 569 148 508 4.92e-14 75.9
Msa0100990 AT1G55590.1 24.889 225 164 4 172 394 294 515 6.43e-14 75.5
Msa0100990 AT2G06040.1 24.911 281 200 6 337 610 473 749 1.62e-13 74.3
Msa0100990 AT1G47056.1 23.913 460 294 16 41 492 15 426 6.54e-13 72.0
Msa0100990 AT1G47056.1 28.082 292 142 8 347 581 130 410 2.60e-11 67.0
Msa0100990 AT4G07400.1 30.667 150 76 3 177 299 330 478 7.12e-13 72.0
Msa0100990 AT3G50080.1 24.222 450 259 16 57 500 33 406 1.07e-12 71.2
Msa0100990 AT1G77000.3 26.087 184 83 3 204 387 106 236 3.27e-12 67.8
Msa0100990 AT1G77000.4 26.087 184 83 3 204 387 106 236 3.27e-12 67.8
Msa0100990 AT2G17020.1 23.729 531 290 21 183 608 45 565 2.04e-11 67.4
Msa0100990 AT5G67250.1 25.000 308 209 11 201 500 119 412 7.72e-11 65.5

Find 203 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAAGTCTTTCTCTTTA+TGG 0.012962 1_3:+7495386 Msa0100990:CDS
TGCCACAGAATTACCCAATT+TGG 0.171018 1_3:+7496042 Msa0100990:CDS
CTTACCCGCTTTGAGAAAAT+TGG 0.171059 1_3:+7496623 Msa0100990:CDS
TTGGAAACCCTAATTGAAAT+AGG 0.191955 1_3:-7494042 None:intergenic
GATCTCTCTCTAGCTGTTAT+TGG 0.220084 1_3:+7495739 Msa0100990:CDS
TAACATTTGGGAGGAAATTA+AGG 0.226363 1_3:-7495792 None:intergenic
TGACTGCATACTCCGGAAAA+AGG 0.239112 1_3:-7496877 None:intergenic
ATAGATATAACCTTAAGATT+TGG 0.265371 1_3:-7495616 None:intergenic
TTAGGAATCTTTGTTACTTT+GGG 0.266239 1_3:+7497019 Msa0100990:three_prime_UTR
AGATATGAAATCGTGGAAAT+TGG 0.269012 1_3:-7494061 None:intergenic
TCGGTATTAGTGCTCTTGTT+AGG 0.269533 1_3:+7497168 Msa0100990:three_prime_UTR
CTTCAACAAGTTGAATTAAC+TGG 0.274879 1_3:+7496258 Msa0100990:CDS
TGATCAAGACCCAAAGTTAA+TGG 0.275780 1_3:-7496835 None:intergenic
CCTTCTTTCCTTCCAAGCTT+CGG 0.280846 1_3:-7495225 None:intergenic
TGAGAGAGGCTTCTGGGTTA+TGG 0.281774 1_3:+7495816 Msa0100990:CDS
ATCTGTAACTGCCCTGGATT+TGG 0.285015 1_3:+7496195 Msa0100990:CDS
CAGGAAGAAATTTGCTTCCT+TGG 0.285276 1_3:-7494879 None:intergenic
TTGTGTGCGATCTCCGATTC+CGG 0.288491 1_3:+7496519 Msa0100990:CDS
AATATCAAAACAAATGCTTT+TGG 0.289474 1_3:-7497458 None:intergenic
CTTCTTTCCTTCCAAGCTTC+GGG 0.291790 1_3:-7495224 None:intergenic
CTCAAATGACGAGAATAAAA+TGG 0.294170 1_3:+7495162 Msa0100990:CDS
ACTGCATCACGAGGAGGATT+AGG 0.301726 1_3:+7495283 Msa0100990:CDS
TTAATCTCACACGGCAATTT+AGG 0.302140 1_3:+7496760 Msa0100990:three_prime_UTR
GAGATTAAATCTTGCAGTTC+AGG 0.305334 1_3:-7496745 None:intergenic
AAAATTGGGCCACACCCTTT+TGG 0.309297 1_3:+7496638 Msa0100990:CDS
GAGATATGCAGCCATTTAAA+AGG 0.313992 1_3:-7496969 None:intergenic
TTTCTATGGTAAGCTGCTTT+GGG 0.317243 1_3:+7496109 Msa0100990:CDS
TGTGGCACTCTTCCAATTGT+AGG 0.329715 1_3:-7496026 None:intergenic
TCAAGGACTGTGCCGGTGTT+GGG 0.330559 1_3:+7495638 Msa0100990:CDS
GTTAGGAATCTTTGTTACTT+TGG 0.334438 1_3:+7497018 Msa0100990:three_prime_UTR
AGATGCTTGTTGAACATCTT+TGG 0.338078 1_3:+7496706 Msa0100990:CDS
TAGATATAACCTTAAGATTT+GGG 0.344478 1_3:-7495615 None:intergenic
GCCACAGAATTACCCAATTT+GGG 0.348800 1_3:+7496043 Msa0100990:CDS
GTTGAATTAACTGGACTTAA+GGG 0.349439 1_3:+7496267 Msa0100990:CDS
AGGAAGAAATTTGCTTCCTT+GGG 0.350453 1_3:-7494878 None:intergenic
AGAACACAACTACCGGGTTC+TGG 0.350941 1_3:+7496994 Msa0100990:three_prime_UTR
GCAAATTTCTTCCTGTCTCT+TGG 0.351075 1_3:+7494887 Msa0100990:CDS
CTCGAAATTCTGAACCTTGA+AGG 0.357149 1_3:+7496420 Msa0100990:CDS
ATGTTAGTGAGAGAGGCTTC+TGG 0.357800 1_3:+7495809 Msa0100990:CDS
AAGCCTCTCTCACTAACATT+TGG 0.362156 1_3:-7495805 None:intergenic
AGTTGAATTAACTGGACTTA+AGG 0.362492 1_3:+7496266 Msa0100990:CDS
ATCTGCCCTTTGTGTTTGTA+TGG 0.364723 1_3:+7497395 Msa0100990:three_prime_UTR
GTTTCTTCTGTTGGTGATGA+AGG 0.367259 1_3:+7495412 Msa0100990:CDS
TTATGGAATGTTTCTTCTGT+TGG 0.375011 1_3:+7495403 Msa0100990:CDS
GAGAGAGGCTTCTGGGTTAT+GGG 0.375727 1_3:+7495817 Msa0100990:CDS
GCCTCTTTGAGATCTTTAGA+AGG 0.392355 1_3:+7495032 Msa0100990:CDS
TGGGTTATGGGAAATGCTAA+TGG 0.394159 1_3:+7495829 Msa0100990:CDS
GTCAGGCTGCACTTTGGTTA+CGG 0.399322 1_3:+7496593 Msa0100990:CDS
CCCTGGTCAATCTGCATGGT+TGG 0.402559 1_3:+7496394 Msa0100990:CDS
ATCCATTAGCGATCTCAATA+AGG 0.403036 1_3:-7495435 None:intergenic
GAAAGTGACTGTGAAGAGTT+TGG 0.407597 1_3:+7495184 Msa0100990:CDS
TGTGTGCGATCTCCGATTCC+GGG 0.408544 1_3:+7496520 Msa0100990:CDS
CGGTATTAGTGCTCTTGTTA+GGG 0.411071 1_3:+7497169 Msa0100990:three_prime_UTR
ATCACTTGAAAGCCTACAAT+TGG 0.412655 1_3:+7496014 Msa0100990:CDS
CCAAAGAAGTCGAAGAAAAC+AGG 0.414246 1_3:-7495678 None:intergenic
CTGCATCACGAGGAGGATTA+GGG 0.415640 1_3:+7495284 Msa0100990:CDS
TGGAAACCCTAATTGAAATA+GGG 0.415958 1_3:-7494041 None:intergenic
AGCCTCTCTCACTAACATTT+GGG 0.422860 1_3:-7495804 None:intergenic
GTGTGCCAGGGCTGCTATCC+CGG 0.423492 1_3:-7496538 None:intergenic
CTTAAGGGAGTCACAGATGC+TGG 0.425211 1_3:+7496282 Msa0100990:CDS
GGCCTTATTGAGATCGCTAA+TGG 0.425507 1_3:+7495433 Msa0100990:CDS
CATCAAGATCACAAAGCAAT+TGG 0.425806 1_3:-7496491 None:intergenic
ATCTCAAAGAGGCACTCATC+TGG 0.426649 1_3:-7495022 None:intergenic
AAAGTTCTGCCCAAATCTTA+AGG 0.427807 1_3:+7495606 Msa0100990:CDS
CTACAGATTCTTTCTCTGTC+AGG 0.430438 1_3:+7496576 Msa0100990:CDS
CGATTCCGGGATAGCAGCCC+TGG 0.432829 1_3:+7496533 Msa0100990:CDS
ATTTGATTAGTGAGTATTGA+AGG 0.433496 1_3:-7494131 None:intergenic
TGTTAGTGAGAGAGGCTTCT+GGG 0.434709 1_3:+7495810 Msa0100990:CDS
AGGGTAGCGTTGCCAAATCC+AGG 0.436782 1_3:-7496207 None:intergenic
TTAATGAACCATTCATTGTA+TGG 0.438116 1_3:+7493894 Msa0100990:five_prime_UTR
CATTCTCCATCGAAAACAAA+TGG 0.441047 1_3:-7494962 None:intergenic
AACTGCGATTAAAGCCTTGT+CGG 0.441499 1_3:-7495503 None:intergenic
TTACCCGCTTTGAGAAAATT+GGG 0.441746 1_3:+7496624 Msa0100990:CDS
AAAGCCTTGTCGGAAATTGC+AGG 0.442003 1_3:-7495493 None:intergenic
AACTACCGGGTTCTGGAGTT+AGG 0.442050 1_3:+7497001 Msa0100990:three_prime_UTR
TAACTGTGGTGCAAAATTGA+AGG 0.443191 1_3:+7496083 Msa0100990:CDS
CAGAAGCATAAGCCAGCGTT+TGG 0.444467 1_3:-7495095 None:intergenic
GAATCTTTGTTACTTTGGGT+TGG 0.446597 1_3:+7497023 Msa0100990:three_prime_UTR
CTGCTTTGGGATCAAGGATC+TGG 0.448619 1_3:+7496122 Msa0100990:CDS
GCACTCCTTTCTTCACCAAC+AGG 0.449873 1_3:-7495058 None:intergenic
GGTAAGCTGCTTTGGGATCA+AGG 0.450353 1_3:+7496116 Msa0100990:CDS
GCTGGATATTTAGTCCCAAA+AGG 0.450825 1_3:-7496653 None:intergenic
ATCAAGGACTGTGCCGGTGT+TGG 0.452196 1_3:+7495637 Msa0100990:CDS
ATCTGTACCACGGTGTCAAT+AGG 0.457103 1_3:+7497123 Msa0100990:three_prime_UTR
AACTTTAACAAGACCAGCCT+CGG 0.457238 1_3:-7496328 None:intergenic
CTAGCTGTTATTGGACACTA+TGG 0.460329 1_3:+7495748 Msa0100990:CDS
TTCAAGTGATATAGCAGCCT+TGG 0.460685 1_3:-7496001 None:intergenic
GGGATACCTTTCCCGAAGCT+TGG 0.461300 1_3:+7495213 Msa0100990:CDS
CAACTTGAGGGCCAAGAGAC+AGG 0.463141 1_3:-7494898 None:intergenic
TGTGCCGGTGTTGGGGATCA+AGG 0.466975 1_3:+7495646 Msa0100990:CDS
TTATCGATCTGTAACTGCCC+TGG 0.467205 1_3:+7496189 Msa0100990:CDS
CCGAAGCTTGGAAGGAAAGA+AGG 0.469354 1_3:+7495225 Msa0100990:CDS
CTCCCAAATGTTAGTGAGAG+AGG 0.473423 1_3:+7495802 Msa0100990:CDS
CGCGTTCTGAGTTGCTTCCA+CGG 0.473495 1_3:-7495318 None:intergenic
TTGCTTGAGAGCTCCGAGGC+TGG 0.476623 1_3:+7496315 Msa0100990:CDS
ATCTCTGAGAACACAACTAC+CGG 0.477432 1_3:+7496987 Msa0100990:three_prime_UTR
CTGCTTGTGTTTCCAAACGC+TGG 0.478903 1_3:+7495083 Msa0100990:CDS
TGGGATCAAGGATCTGGACT+TGG 0.479690 1_3:+7496128 Msa0100990:CDS
AGACTTGCTGCTATTGCAGT+TGG 0.480536 1_3:+7495259 Msa0100990:CDS
CAGGGCTGCTATCCCGGAAT+CGG 0.488751 1_3:-7496532 None:intergenic
GCAGAGGAGTAACCGATGTT+GGG 0.492742 1_3:+7495887 Msa0100990:CDS
AACGCTACCCTTTCTGTACT+CGG 0.496998 1_3:+7496219 Msa0100990:CDS
ACGGATTCCCATACAATGAA+TGG 0.499139 1_3:-7493902 None:intergenic
TTGATCATCATCCAGTGACT+CGG 0.499367 1_3:+7496851 Msa0100990:three_prime_UTR
TTCTCTGTCAGGCTGCACTT+TGG 0.500531 1_3:+7496587 Msa0100990:CDS
TGTAAGAGACAAGTGGGAAA+CGG 0.500705 1_3:-7493921 None:intergenic
GCACCCATGTCTCAAGTCTT+CGG 0.505219 1_3:+7494221 Msa0100990:exon
CAGGGATGAAACTACTTTGT+CGG 0.506121 1_3:-7496376 None:intergenic
TCTTAAGGTTATATCTATCA+AGG 0.507799 1_3:+7495621 Msa0100990:CDS
TGCAGAGGAGTAACCGATGT+TGG 0.509560 1_3:+7495886 Msa0100990:CDS
GCCTCGGAGCTCTCAAGCAA+TGG 0.512849 1_3:-7496312 None:intergenic
AGTGATTCACAATGAGATAC+AGG 0.513908 1_3:-7496159 None:intergenic
GGTTGCCTGTTGGTGAAGAA+AGG 0.514240 1_3:+7495053 Msa0100990:CDS
GACTTCTTTGGTTCTGACAA+AGG 0.516837 1_3:+7495690 Msa0100990:CDS
TGCTGATTGAATTGCAATGC+TGG 0.518629 1_3:-7496671 None:intergenic
TTTGACTCAAACGGAGGTAT+CGG 0.518846 1_3:+7497149 Msa0100990:three_prime_UTR
AGACCTTCATTGCGAATGCT+AGG 0.519816 1_3:-7495571 None:intergenic
TGTCCTAGCATTCGCAATGA+AGG 0.520385 1_3:+7495568 Msa0100990:CDS
TAATGAACCATTCATTGTAT+GGG 0.522711 1_3:+7493895 Msa0100990:five_prime_UTR
GAACGCGGCGTGACAACTCT+AGG 0.525236 1_3:+7495334 Msa0100990:CDS
TACCTTTCCCGAAGCTTGGA+AGG 0.529475 1_3:+7495217 Msa0100990:CDS
CAAGGACTGTGCCGGTGTTG+GGG 0.530233 1_3:+7495639 Msa0100990:CDS
TGCTTGTTGAACATCTTTGG+AGG 0.531336 1_3:+7496709 Msa0100990:CDS
TTCCTTCCAAGCTTCGGGAA+AGG 0.533717 1_3:-7495219 None:intergenic
CTGGATATTTAGTCCCAAAA+GGG 0.534654 1_3:-7496652 None:intergenic
TCCAACCATGCAGATTGACC+AGG 0.536554 1_3:-7496395 None:intergenic
GGTCTCAAAGCAGTTGCTAG+TGG 0.537588 1_3:+7495355 Msa0100990:CDS
GGCCAAGGCCCTCGAAAACA+AGG 0.538671 1_3:-7497224 None:intergenic
AACATCGGTTACTCCTCTGC+AGG 0.539479 1_3:-7495884 None:intergenic
AAAGGTGAAGCTTCAAGCAC+TGG 0.541994 1_3:+7495708 Msa0100990:CDS
AGCTAGAGAGAGATCAGAAA+CGG 0.542100 1_3:-7495731 None:intergenic
CAGAGGGAACTAAGAAATTG+TGG 0.543960 1_3:-7497083 None:intergenic
TTCGAGGGCCTTGGCCGTGG+CGG 0.544881 1_3:+7497231 Msa0100990:three_prime_UTR
ATAACTTGCCGCCACGGCCA+AGG 0.549106 1_3:-7497239 None:intergenic
GGGATTGAAGCTGTTGGAAA+GGG 0.549164 1_3:+7495907 Msa0100990:CDS
TCATCCCTGGTCAATCTGCA+TGG 0.552095 1_3:+7496390 Msa0100990:CDS
GTTGGGGATCAAGGAATCGC+TGG 0.553667 1_3:+7495655 Msa0100990:CDS
TAAATCTTGCAGTTCAGGAA+AGG 0.554597 1_3:-7496740 None:intergenic
CTGTGAAGAGTTTGGAGGTG+AGG 0.561043 1_3:+7495192 Msa0100990:CDS
GATAGTAGACATCAACTTGA+GGG 0.562773 1_3:-7494910 None:intergenic
CGACAAAGTAGTTTCATCCC+TGG 0.562846 1_3:+7496377 Msa0100990:CDS
TGTGAAGAGTTTGGAGGTGA+GGG 0.567927 1_3:+7495193 Msa0100990:CDS
AATTCAACTTGTTGAAGCTG+AGG 0.567931 1_3:-7496252 None:intergenic
ATACACCATACAAACACAAA+GGG 0.569316 1_3:-7497400 None:intergenic
TTAGGGAAGCTTTCAATCCG+TGG 0.570647 1_3:+7495301 Msa0100990:CDS
GCTGCACTTTGGTTACGGAC+AGG 0.573743 1_3:+7496598 Msa0100990:CDS
ATATCTATCAAGGACTGTGC+CGG 0.574521 1_3:+7495631 Msa0100990:CDS
ACAACTTTCCGAGTACAGAA+AGG 0.575435 1_3:-7496227 None:intergenic
AAAGAGAAAGACTTTAGAGA+AGG 0.577504 1_3:-7495382 None:intergenic
CAACTTTCCGAGTACAGAAA+GGG 0.577567 1_3:-7496226 None:intergenic
ATTCAACTTGTTGAAGCTGA+GGG 0.582352 1_3:-7496251 None:intergenic
TTAAGGGAGTCACAGATGCT+GGG 0.582917 1_3:+7496283 Msa0100990:CDS
AAATTGCAGGGCATTTGCAA+AGG 0.585154 1_3:-7495480 None:intergenic
ACATGTATAACTTGCCGCCA+CGG 0.587512 1_3:-7497245 None:intergenic
CTTGTTAAAGTTAATCTCAG+TGG 0.588339 1_3:+7496339 Msa0100990:CDS
CGGATTGATTTCATTCACCA+AGG 0.590158 1_3:+7495984 Msa0100990:CDS
AATGAAGGTCTACAAGCCAT+TGG 0.590793 1_3:+7495583 Msa0100990:CDS
GGTTAAATGACTGCATACTC+CGG 0.591159 1_3:-7496884 None:intergenic
TTTATTCTCGTCATTTGAGG+AGG 0.593111 1_3:-7495158 None:intergenic
TGATCATCATCCAGTGACTC+GGG 0.594984 1_3:+7496852 Msa0100990:three_prime_UTR
AAGCCTTGTCGGAAATTGCA+GGG 0.597068 1_3:-7495492 None:intergenic
ATTTGGGCAGAACTTTCCAA+TGG 0.599132 1_3:-7495599 None:intergenic
AAAGGCAGCAACCAAATACA+TGG 0.601427 1_3:-7496951 None:intergenic
TATTTAGTCCCAAAAGGGTG+TGG 0.603959 1_3:-7496647 None:intergenic
GAGGAAATTAAGGACAAGAT+CGG 0.606521 1_3:-7495782 None:intergenic
TGTGCATTTCTCTCAGACAA+CGG 0.609269 1_3:+7495964 Msa0100990:CDS
CTGCAAGATTTAATCTCACA+CGG 0.610841 1_3:+7496751 Msa0100990:three_prime_UTR
CATGCAGAAGTCTAGTTACA+CGG 0.612777 1_3:+7496795 Msa0100990:three_prime_UTR
GGAAGAAATTTGCTTCCTTG+GGG 0.618210 1_3:-7494877 None:intergenic
TGGGATTGAAGCTGTTGGAA+AGG 0.620246 1_3:+7495906 Msa0100990:CDS
CTCACAATTGCATCCTGCAG+AGG 0.621245 1_3:+7495871 Msa0100990:CDS
AACAGCTTCAATCCCAACAT+CGG 0.622290 1_3:-7495899 None:intergenic
AATGATAACTCGGTCAGAGT+CGG 0.624354 1_3:-7495538 None:intergenic
ACCCAAATTGGGTAATTCTG+TGG 0.625237 1_3:-7496044 None:intergenic
ATCTTTAGAAGGTTGCCTGT+TGG 0.625556 1_3:+7495043 Msa0100990:CDS
GGATAGTAGACATCAACTTG+AGG 0.626268 1_3:-7494911 None:intergenic
ACACGTGATCTCTTCTGAGG+TGG 0.627046 1_3:-7494932 None:intergenic
ATGCCCTGCAATTTCCGACA+AGG 0.628954 1_3:+7495489 Msa0100990:CDS
GGAATCGGAGATCGCACACA+AGG 0.629259 1_3:-7496517 None:intergenic
GGGTAGCGTTGCCAAATCCA+GGG 0.632564 1_3:-7496206 None:intergenic
CTGACACGTGATCTCTTCTG+AGG 0.633789 1_3:-7494935 None:intergenic
ACAAGACTCTAATGATAACT+CGG 0.633790 1_3:-7495548 None:intergenic
GATGTTGGGATTGAAGCTGT+TGG 0.634700 1_3:+7495901 Msa0100990:CDS
CTCTCTCACTAACATTTGGG+AGG 0.636568 1_3:-7495801 None:intergenic
AGTGACTGTGAAGAGTTTGG+AGG 0.636749 1_3:+7495187 Msa0100990:CDS
AAAGCCGAAGACTTGAGACA+TGG 0.637618 1_3:-7494225 None:intergenic
AATACACCATACAAACACAA+AGG 0.641843 1_3:-7497401 None:intergenic
GAATTGAAGATATGAAATCG+TGG 0.645235 1_3:-7494068 None:intergenic
AAGCCGAAGACTTGAGACAT+GGG 0.649190 1_3:-7494224 None:intergenic
GATTCCTTGATCCCCAACAC+CGG 0.655421 1_3:-7495650 None:intergenic
TCCATTGCTTGAGAGCTCCG+AGG 0.656114 1_3:+7496311 Msa0100990:CDS
TCTCTGAGAACACAACTACC+GGG 0.663577 1_3:+7496988 Msa0100990:three_prime_UTR
ACCTTCTAAAGATCTCAAAG+AGG 0.665153 1_3:-7495033 None:intergenic
CGTGGAAGCAACTCAGAACG+CGG 0.669342 1_3:+7495319 Msa0100990:CDS
GTTGGAACTGCATCACGAGG+AGG 0.679979 1_3:+7495277 Msa0100990:CDS
AGATTCCTAACTCCAGAACC+CGG 0.680416 1_3:-7497006 None:intergenic
CCAACCATGCAGATTGACCA+GGG 0.686419 1_3:-7496394 None:intergenic
GGTTTGTGTATAACCCACCA+TGG 0.686541 1_3:-7494856 None:intergenic
AATAGCAGCAAGTCTAACAT+CGG 0.688914 1_3:-7495251 None:intergenic
AAAAGAAAGAGAAAATTAGG+GGG 0.695854 1_3:-7494014 None:intergenic
GCAGTTGGAACTGCATCACG+AGG 0.700255 1_3:+7495274 Msa0100990:CDS
TGGGTTATACACAAACCCCA+AGG 0.726645 1_3:+7494862 Msa0100990:CDS
CAAAACACCTATTGACACCG+TGG 0.742161 1_3:-7497130 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAGAGAAAATTA+GGG - chr1_3:7494019-7494038 None:intergenic 15.0%
!! AAAAAAAGAAAGAGAAAATT+AGG - chr1_3:7494020-7494039 None:intergenic 15.0%
!!! TATTTGATTCATAGATTTTT+AGG + chr1_3:7494279-7494298 Msa0100990:intron 15.0%
!! AAAAAGAAAGAGAAAATTAG+GGG - chr1_3:7494018-7494037 None:intergenic 20.0%
!! GAATCAAATAAAAAACGTAA+AGG - chr1_3:7494269-7494288 None:intergenic 20.0%
!!! AATTCTCTTAATTTGTTATG+TGG + chr1_3:7494453-7494472 Msa0100990:intron 20.0%
!!! TTTTACTTTTCTGATATCAA+AGG + chr1_3:7494668-7494687 Msa0100990:intron 20.0%
!! TAGATATAACCTTAAGATTT+GGG - chr1_3:7495618-7495637 None:intergenic 20.0%
!! ATAGATATAACCTTAAGATT+TGG - chr1_3:7495619-7495638 None:intergenic 20.0%
!!! CAAATTTTATTTCATCATTG+TGG - chr1_3:7497428-7497447 None:intergenic 20.0%
!!! AATATCAAAACAAATGCTTT+TGG - chr1_3:7497461-7497480 None:intergenic 20.0%
! TTAATGAACCATTCATTGTA+TGG + chr1_3:7493894-7493913 Msa0100990:five_prime_UTR 25.0%
! TAATGAACCATTCATTGTAT+GGG + chr1_3:7493895-7493914 Msa0100990:five_prime_UTR 25.0%
!! TTTTATTGTAAGAGACAAGT+GGG - chr1_3:7493930-7493949 None:intergenic 25.0%
!! TTTTTATTGTAAGAGACAAG+TGG - chr1_3:7493931-7493950 None:intergenic 25.0%
! AATGAAAAATGAAGGGAAAA+GGG - chr1_3:7493958-7493977 None:intergenic 25.0%
! GAAGATGAATGAAAAATGAA+GGG - chr1_3:7493965-7493984 None:intergenic 25.0%
! AGAAGATGAATGAAAAATGA+AGG - chr1_3:7493966-7493985 None:intergenic 25.0%
! AAAAGAAAGAGAAAATTAGG+GGG - chr1_3:7494017-7494036 None:intergenic 25.0%
!!! TTTTTTGCCCTATTTCAATT+AGG + chr1_3:7494034-7494053 Msa0100990:five_prime_UTR 25.0%
!! TTTTTGCCCTATTTCAATTA+GGG + chr1_3:7494035-7494054 Msa0100990:five_prime_UTR 25.0%
!!! ATTTGATTAGTGAGTATTGA+AGG - chr1_3:7494134-7494153 None:intergenic 25.0%
!!! ATTCATAGATTTTTAGGTTG+TGG + chr1_3:7494285-7494304 Msa0100990:intron 25.0%
!!! TTCATAGATTTTTAGGTTGT+GGG + chr1_3:7494286-7494305 Msa0100990:intron 25.0%
!!! ATGATGATTTTGATGTTCAT+AGG + chr1_3:7494366-7494385 Msa0100990:intron 25.0%
!!! TCTTAATTTGTTATGTGGTA+TGG + chr1_3:7494458-7494477 Msa0100990:intron 25.0%
! AGATCTATGAGATTAGTATA+TGG + chr1_3:7494535-7494554 Msa0100990:intron 25.0%
! GATCTATGAGATTAGTATAT+GGG + chr1_3:7494536-7494555 Msa0100990:intron 25.0%
! TCTTAAGGTTATATCTATCA+AGG + chr1_3:7495621-7495640 Msa0100990:CDS 25.0%
!!! AAAATTGAAGGCTTTTTCTA+TGG + chr1_3:7496095-7496114 Msa0100990:CDS 25.0%
!!! TGATATTTTTACAACCTTCA+AGG - chr1_3:7496437-7496456 None:intergenic 25.0%
!!! TTTTTTGGTCCATTAACTTT+GGG + chr1_3:7496826-7496845 Msa0100990:three_prime_UTR 25.0%
! AAGGAATCTGCAAAAAAATA+TGG - chr1_3:7496908-7496927 None:intergenic 25.0%
! AAAAACAGAATTCCAATCAA+AGG - chr1_3:7496927-7496946 None:intergenic 25.0%
!! TTTGATTGGAATTCTGTTTT+TGG + chr1_3:7496926-7496945 Msa0100990:three_prime_UTR 25.0%
!!! TTAGGAATCTTTGTTACTTT+GGG + chr1_3:7497019-7497038 Msa0100990:three_prime_UTR 25.0%
!!! AAAGGTTGTTTTTTTATACC+AGG + chr1_3:7497295-7497314 Msa0100990:three_prime_UTR 25.0%
! TGAAGCCTTAAAAAAAACTA+GGG - chr1_3:7497321-7497340 None:intergenic 25.0%
! ATGAAGCCTTAAAAAAAACT+AGG - chr1_3:7497322-7497341 None:intergenic 25.0%
GAATGAAAAATGAAGGGAAA+AGG - chr1_3:7493959-7493978 None:intergenic 30.0%
TGGAAACCCTAATTGAAATA+GGG - chr1_3:7494044-7494063 None:intergenic 30.0%
TTGGAAACCCTAATTGAAAT+AGG - chr1_3:7494045-7494064 None:intergenic 30.0%
AGATATGAAATCGTGGAAAT+TGG - chr1_3:7494064-7494083 None:intergenic 30.0%
GAATTGAAGATATGAAATCG+TGG - chr1_3:7494071-7494090 None:intergenic 30.0%
!!! CTTTTTTTGCACTTTTTGGA+GGG + chr1_3:7494187-7494206 Msa0100990:five_prime_UTR 30.0%
TTAAGAGGTGAAATTTCAAC+TGG + chr1_3:7494493-7494512 Msa0100990:intron 30.0%
TAAGAGGTGAAATTTCAACT+GGG + chr1_3:7494494-7494513 Msa0100990:intron 30.0%
TATGAGATTAGTATATGGGA+GGG + chr1_3:7494540-7494559 Msa0100990:intron 30.0%
!!! AGCAGTTTTGTTGAATTTGA+TGG + chr1_3:7494731-7494750 Msa0100990:intron 30.0%
! CATTTTATTCTCGTCATTTG+AGG - chr1_3:7495164-7495183 None:intergenic 30.0%
CTCAAATGACGAGAATAAAA+TGG + chr1_3:7495162-7495181 Msa0100990:CDS 30.0%
! AAAGAGAAAGACTTTAGAGA+AGG - chr1_3:7495385-7495404 None:intergenic 30.0%
!! CTCTAAAGTCTTTCTCTTTA+TGG + chr1_3:7495386-7495405 Msa0100990:CDS 30.0%
TTATGGAATGTTTCTTCTGT+TGG + chr1_3:7495403-7495422 Msa0100990:CDS 30.0%
ACAAGACTCTAATGATAACT+CGG - chr1_3:7495551-7495570 None:intergenic 30.0%
TAACATTTGGGAGGAAATTA+AGG - chr1_3:7495795-7495814 None:intergenic 30.0%
! AGATGTACGCTTTTCAAATT+AGG - chr1_3:7495937-7495956 None:intergenic 30.0%
!! ATTACCCAATTTGGGTTTTT+CGG + chr1_3:7496051-7496070 Msa0100990:CDS 30.0%
! ATTTTGCACCACAGTTAAAA+AGG - chr1_3:7496080-7496099 None:intergenic 30.0%
! CTTCAACAAGTTGAATTAAC+TGG + chr1_3:7496258-7496277 Msa0100990:CDS 30.0%
AGTTGAATTAACTGGACTTA+AGG + chr1_3:7496266-7496285 Msa0100990:CDS 30.0%
GTTGAATTAACTGGACTTAA+GGG + chr1_3:7496267-7496286 Msa0100990:CDS 30.0%
CTTGTTAAAGTTAATCTCAG+TGG + chr1_3:7496339-7496358 Msa0100990:CDS 30.0%
!!! GTTTTTTGGTCCATTAACTT+TGG + chr1_3:7496825-7496844 Msa0100990:three_prime_UTR 30.0%
! TTTTTGCAGATTCCTTTGAT+TGG + chr1_3:7496912-7496931 Msa0100990:three_prime_UTR 30.0%
! GTTAGGAATCTTTGTTACTT+TGG + chr1_3:7497018-7497037 Msa0100990:three_prime_UTR 30.0%
ACTGTAAAAACATAGACAGA+GGG - chr1_3:7497102-7497121 None:intergenic 30.0%
AACTGTAAAAACATAGACAG+AGG - chr1_3:7497103-7497122 None:intergenic 30.0%
! TTTTACAGTTATCTGTACCA+CGG + chr1_3:7497113-7497132 Msa0100990:three_prime_UTR 30.0%
!!! AATAGGTGTTTTGACTCAAA+CGG + chr1_3:7497140-7497159 Msa0100990:three_prime_UTR 30.0%
! CATGACAATCTTTTTCCATT+GGG + chr1_3:7497272-7497291 Msa0100990:three_prime_UTR 30.0%
AAAAAAACAACCTTTCCCAA+TGG - chr1_3:7497290-7497309 None:intergenic 30.0%
ATACACCATACAAACACAAA+GGG - chr1_3:7497403-7497422 None:intergenic 30.0%
AATACACCATACAAACACAA+AGG - chr1_3:7497404-7497423 None:intergenic 30.0%
AAAAATGAAGGGAAAAGGGA+AGG - chr1_3:7493954-7493973 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+CGG - chr1_3:7494160-7494179 None:intergenic 35.0%
!!! GCTGCTTTTTTTGCACTTTT+TGG + chr1_3:7494183-7494202 Msa0100990:five_prime_UTR 35.0%
!!! GCTTTTTTTGCACTTTTTGG+AGG + chr1_3:7494186-7494205 Msa0100990:five_prime_UTR 35.0%
CAACCAAAAATAGTAGCATG+TGG + chr1_3:7494325-7494344 Msa0100990:intron 35.0%
! GAACCACATGCTACTATTTT+TGG - chr1_3:7494331-7494350 None:intergenic 35.0%
ATGTGGTATGGATAATCATG+TGG + chr1_3:7494470-7494489 Msa0100990:intron 35.0%
TGGATAATCATGTGGTTAAG+AGG + chr1_3:7494478-7494497 Msa0100990:intron 35.0%
CTATGAGATTAGTATATGGG+AGG + chr1_3:7494539-7494558 Msa0100990:intron 35.0%
GATGAGATAGTGAGATACTT+TGG + chr1_3:7494627-7494646 Msa0100990:intron 35.0%
AACGATTGTGCAAAATCATC+AGG - chr1_3:7494812-7494831 None:intergenic 35.0%
! AGGAAGAAATTTGCTTCCTT+GGG - chr1_3:7494881-7494900 None:intergenic 35.0%
GATAGTAGACATCAACTTGA+GGG - chr1_3:7494913-7494932 None:intergenic 35.0%
!! AGTGTTCCATTTGTTTTCGA+TGG + chr1_3:7494956-7494975 Msa0100990:CDS 35.0%
CATTCTCCATCGAAAACAAA+TGG - chr1_3:7494965-7494984 None:intergenic 35.0%
!! CATTTGTTTTCGATGGAGAA+TGG + chr1_3:7494963-7494982 Msa0100990:CDS 35.0%
! ACCTTCTAAAGATCTCAAAG+AGG - chr1_3:7495036-7495055 None:intergenic 35.0%
TTTATTCTCGTCATTTGAGG+AGG - chr1_3:7495161-7495180 None:intergenic 35.0%
AATAGCAGCAAGTCTAACAT+CGG - chr1_3:7495254-7495273 None:intergenic 35.0%
ATCCATTAGCGATCTCAATA+AGG - chr1_3:7495438-7495457 None:intergenic 35.0%
AAAGTTCTGCCCAAATCTTA+AGG + chr1_3:7495606-7495625 Msa0100990:CDS 35.0%
GAGGAAATTAAGGACAAGAT+CGG - chr1_3:7495785-7495804 None:intergenic 35.0%
ATCACTTGAAAGCCTACAAT+TGG + chr1_3:7496014-7496033 Msa0100990:CDS 35.0%
TAACTGTGGTGCAAAATTGA+AGG + chr1_3:7496083-7496102 Msa0100990:CDS 35.0%
! TTTTCTATGGTAAGCTGCTT+TGG + chr1_3:7496108-7496127 Msa0100990:CDS 35.0%
! TTTCTATGGTAAGCTGCTTT+GGG + chr1_3:7496109-7496128 Msa0100990:CDS 35.0%
AGTGATTCACAATGAGATAC+AGG - chr1_3:7496162-7496181 None:intergenic 35.0%
!! ATTCAACTTGTTGAAGCTGA+GGG - chr1_3:7496254-7496273 None:intergenic 35.0%
!! AATTCAACTTGTTGAAGCTG+AGG - chr1_3:7496255-7496274 None:intergenic 35.0%
CATCAAGATCACAAAGCAAT+TGG - chr1_3:7496494-7496513 None:intergenic 35.0%
!! TTACCCGCTTTGAGAAAATT+GGG + chr1_3:7496624-7496643 Msa0100990:CDS 35.0%
CTGGATATTTAGTCCCAAAA+GGG - chr1_3:7496655-7496674 None:intergenic 35.0%
! AGATGCTTGTTGAACATCTT+TGG + chr1_3:7496706-7496725 Msa0100990:CDS 35.0%
TAAATCTTGCAGTTCAGGAA+AGG - chr1_3:7496743-7496762 None:intergenic 35.0%
GAGATTAAATCTTGCAGTTC+AGG - chr1_3:7496748-7496767 None:intergenic 35.0%
CTGCAAGATTTAATCTCACA+CGG + chr1_3:7496751-7496770 Msa0100990:three_prime_UTR 35.0%
TTAATCTCACACGGCAATTT+AGG + chr1_3:7496760-7496779 Msa0100990:three_prime_UTR 35.0%
!!! TACACGGCATAGTAGTTTTT+TGG + chr1_3:7496811-7496830 Msa0100990:three_prime_UTR 35.0%
TGATCAAGACCCAAAGTTAA+TGG - chr1_3:7496838-7496857 None:intergenic 35.0%
!!! TGTTTTTGGCACCATGTATT+TGG + chr1_3:7496940-7496959 Msa0100990:three_prime_UTR 35.0%
! TTTGGTTGCTGCCTTTTAAA+TGG + chr1_3:7496958-7496977 Msa0100990:three_prime_UTR 35.0%
GAGATATGCAGCCATTTAAA+AGG - chr1_3:7496972-7496991 None:intergenic 35.0%
!! GAATCTTTGTTACTTTGGGT+TGG + chr1_3:7497023-7497042 Msa0100990:three_prime_UTR 35.0%
!!! TTTTTAGCTCGGCTTTGTAT+CGG + chr1_3:7497055-7497074 Msa0100990:three_prime_UTR 35.0%
!!! TTATGAAGCCTTGTTTTCGA+GGG + chr1_3:7497216-7497235 Msa0100990:three_prime_UTR 35.0%
CCAATGGAAAAAGATTGTCA+TGG - chr1_3:7497274-7497293 None:intergenic 35.0%
! CCATGACAATCTTTTTCCAT+TGG + chr1_3:7497271-7497290 Msa0100990:three_prime_UTR 35.0%
! CAATCTTTTTCCATTGGGAA+AGG + chr1_3:7497277-7497296 Msa0100990:three_prime_UTR 35.0%
ACGGATTCCCATACAATGAA+TGG - chr1_3:7493905-7493924 None:intergenic 40.0%
TGTAAGAGACAAGTGGGAAA+CGG - chr1_3:7493924-7493943 None:intergenic 40.0%
GCACAATCGTTTATGTTCTC+AGG + chr1_3:7494821-7494840 Msa0100990:intron 40.0%
! TCAGGTGATAACTTTTGCCA+TGG + chr1_3:7494839-7494858 Msa0100990:intron 40.0%
! GTGATAACTTTTGCCATGGT+GGG + chr1_3:7494843-7494862 Msa0100990:CDS 40.0%
! GGAAGAAATTTGCTTCCTTG+GGG - chr1_3:7494880-7494899 None:intergenic 40.0%
! CAGGAAGAAATTTGCTTCCT+TGG - chr1_3:7494882-7494901 None:intergenic 40.0%
GCAAATTTCTTCCTGTCTCT+TGG + chr1_3:7494887-7494906 Msa0100990:CDS 40.0%
GGATAGTAGACATCAACTTG+AGG - chr1_3:7494914-7494933 None:intergenic 40.0%
!! GCCTCTTTGAGATCTTTAGA+AGG + chr1_3:7495032-7495051 Msa0100990:CDS 40.0%
! ATCTTTAGAAGGTTGCCTGT+TGG + chr1_3:7495043-7495062 Msa0100990:CDS 40.0%
GAAAGTGACTGTGAAGAGTT+TGG + chr1_3:7495184-7495203 Msa0100990:CDS 40.0%
!! GTTTCTTCTGTTGGTGATGA+AGG + chr1_3:7495412-7495431 Msa0100990:CDS 40.0%
! AAATTGCAGGGCATTTGCAA+AGG - chr1_3:7495483-7495502 None:intergenic 40.0%
! AACTGCGATTAAAGCCTTGT+CGG - chr1_3:7495506-7495525 None:intergenic 40.0%
AATGATAACTCGGTCAGAGT+CGG - chr1_3:7495541-7495560 None:intergenic 40.0%
AATGAAGGTCTACAAGCCAT+TGG + chr1_3:7495583-7495602 Msa0100990:CDS 40.0%
ATTTGGGCAGAACTTTCCAA+TGG - chr1_3:7495602-7495621 None:intergenic 40.0%
ATATCTATCAAGGACTGTGC+CGG + chr1_3:7495631-7495650 Msa0100990:CDS 40.0%
CCAAAGAAGTCGAAGAAAAC+AGG - chr1_3:7495681-7495700 None:intergenic 40.0%
! CCTGTTTTCTTCGACTTCTT+TGG + chr1_3:7495678-7495697 Msa0100990:CDS 40.0%
!! GACTTCTTTGGTTCTGACAA+AGG + chr1_3:7495690-7495709 Msa0100990:CDS 40.0%
AGCTAGAGAGAGATCAGAAA+CGG - chr1_3:7495734-7495753 None:intergenic 40.0%
GATCTCTCTCTAGCTGTTAT+TGG + chr1_3:7495739-7495758 Msa0100990:CDS 40.0%
CTAGCTGTTATTGGACACTA+TGG + chr1_3:7495748-7495767 Msa0100990:CDS 40.0%
AGCCTCTCTCACTAACATTT+GGG - chr1_3:7495807-7495826 None:intergenic 40.0%
AAGCCTCTCTCACTAACATT+TGG - chr1_3:7495808-7495827 None:intergenic 40.0%
TGGGTTATGGGAAATGCTAA+TGG + chr1_3:7495829-7495848 Msa0100990:CDS 40.0%
AACAGCTTCAATCCCAACAT+CGG - chr1_3:7495902-7495921 None:intergenic 40.0%
TGTGCATTTCTCTCAGACAA+CGG + chr1_3:7495964-7495983 Msa0100990:CDS 40.0%
! CGGATTGATTTCATTCACCA+AGG + chr1_3:7495984-7496003 Msa0100990:CDS 40.0%
TTCAAGTGATATAGCAGCCT+TGG - chr1_3:7496004-7496023 None:intergenic 40.0%
TGCCACAGAATTACCCAATT+TGG + chr1_3:7496042-7496061 Msa0100990:CDS 40.0%
GCCACAGAATTACCCAATTT+GGG + chr1_3:7496043-7496062 Msa0100990:CDS 40.0%
ACCCAAATTGGGTAATTCTG+TGG - chr1_3:7496047-7496066 None:intergenic 40.0%
CAACTTTCCGAGTACAGAAA+GGG - chr1_3:7496229-7496248 None:intergenic 40.0%
ACAACTTTCCGAGTACAGAA+AGG - chr1_3:7496230-7496249 None:intergenic 40.0%
AACTTTAACAAGACCAGCCT+CGG - chr1_3:7496331-7496350 None:intergenic 40.0%
CAGGGATGAAACTACTTTGT+CGG - chr1_3:7496379-7496398 None:intergenic 40.0%
CTCGAAATTCTGAACCTTGA+AGG + chr1_3:7496420-7496439 Msa0100990:CDS 40.0%
CTACAGATTCTTTCTCTGTC+AGG + chr1_3:7496576-7496595 Msa0100990:CDS 40.0%
!! CTTACCCGCTTTGAGAAAAT+TGG + chr1_3:7496623-7496642 Msa0100990:CDS 40.0%
TATTTAGTCCCAAAAGGGTG+TGG - chr1_3:7496650-7496669 None:intergenic 40.0%
GCTGGATATTTAGTCCCAAA+AGG - chr1_3:7496656-7496675 None:intergenic 40.0%
! TGCTGATTGAATTGCAATGC+TGG - chr1_3:7496674-7496693 None:intergenic 40.0%
! TGCTTGTTGAACATCTTTGG+AGG + chr1_3:7496709-7496728 Msa0100990:CDS 40.0%
CATGCAGAAGTCTAGTTACA+CGG + chr1_3:7496795-7496814 Msa0100990:three_prime_UTR 40.0%
TTGATCATCATCCAGTGACT+CGG + chr1_3:7496851-7496870 Msa0100990:three_prime_UTR 40.0%
GGTTAAATGACTGCATACTC+CGG - chr1_3:7496887-7496906 None:intergenic 40.0%
AAAGGCAGCAACCAAATACA+TGG - chr1_3:7496954-7496973 None:intergenic 40.0%
! ATCTCTGAGAACACAACTAC+CGG + chr1_3:7496987-7497006 Msa0100990:three_prime_UTR 40.0%
AAAGCCGAGCTAAAAACATC+AGG - chr1_3:7497051-7497070 None:intergenic 40.0%
CAGAGGGAACTAAGAAATTG+TGG - chr1_3:7497086-7497105 None:intergenic 40.0%
! TTTGACTCAAACGGAGGTAT+CGG + chr1_3:7497149-7497168 Msa0100990:three_prime_UTR 40.0%
TCGGTATTAGTGCTCTTGTT+AGG + chr1_3:7497168-7497187 Msa0100990:three_prime_UTR 40.0%
CGGTATTAGTGCTCTTGTTA+GGG + chr1_3:7497169-7497188 Msa0100990:three_prime_UTR 40.0%
! TTAGGGTTGTTGCAGTTTTC+TGG + chr1_3:7497186-7497205 Msa0100990:three_prime_UTR 40.0%
!!! GTTATGAAGCCTTGTTTTCG+AGG + chr1_3:7497215-7497234 Msa0100990:three_prime_UTR 40.0%
CCTTAAAAAAAACTAGGGCC+TGG - chr1_3:7497316-7497335 None:intergenic 40.0%
!!! CCAGGCCCTAGTTTTTTTTA+AGG + chr1_3:7497313-7497332 Msa0100990:three_prime_UTR 40.0%
ATCTGCCCTTTGTGTTTGTA+TGG + chr1_3:7497395-7497414 Msa0100990:three_prime_UTR 40.0%
TGAGAGAGAGAGAGAAAGAG+AGG - chr1_3:7494093-7494112 None:intergenic 45.0%
AAGCCGAAGACTTGAGACAT+GGG - chr1_3:7494227-7494246 None:intergenic 45.0%
AAAGCCGAAGACTTGAGACA+TGG - chr1_3:7494228-7494247 None:intergenic 45.0%
! TCTCAAGTCTTCGGCTTTTC+TGG + chr1_3:7494230-7494249 Msa0100990:CDS 45.0%
! GGTGATAACTTTTGCCATGG+TGG + chr1_3:7494842-7494861 Msa0100990:intron 45.0%
GGTTTGTGTATAACCCACCA+TGG - chr1_3:7494859-7494878 None:intergenic 45.0%
TGGGTTATACACAAACCCCA+AGG + chr1_3:7494862-7494881 Msa0100990:CDS 45.0%
!! ATCTCAAAGAGGCACTCATC+TGG - chr1_3:7495025-7495044 None:intergenic 45.0%
AGTGACTGTGAAGAGTTTGG+AGG + chr1_3:7495187-7495206 Msa0100990:CDS 45.0%
TGTGAAGAGTTTGGAGGTGA+GGG + chr1_3:7495193-7495212 Msa0100990:CDS 45.0%
CTTCTTTCCTTCCAAGCTTC+GGG - chr1_3:7495227-7495246 None:intergenic 45.0%
CCTTCTTTCCTTCCAAGCTT+CGG - chr1_3:7495228-7495247 None:intergenic 45.0%
!! AGACTTGCTGCTATTGCAGT+TGG + chr1_3:7495259-7495278 Msa0100990:CDS 45.0%
TTAGGGAAGCTTTCAATCCG+TGG + chr1_3:7495301-7495320 Msa0100990:CDS 45.0%
!! GGCCTTATTGAGATCGCTAA+TGG + chr1_3:7495433-7495452 Msa0100990:CDS 45.0%
! AAGCCTTGTCGGAAATTGCA+GGG - chr1_3:7495495-7495514 None:intergenic 45.0%
! AAAGCCTTGTCGGAAATTGC+AGG - chr1_3:7495496-7495515 None:intergenic 45.0%
TGTCCTAGCATTCGCAATGA+AGG + chr1_3:7495568-7495587 Msa0100990:CDS 45.0%
AGACCTTCATTGCGAATGCT+AGG - chr1_3:7495574-7495593 None:intergenic 45.0%
AAAGGTGAAGCTTCAAGCAC+TGG + chr1_3:7495708-7495727 Msa0100990:CDS 45.0%
CTCTCTCACTAACATTTGGG+AGG - chr1_3:7495804-7495823 None:intergenic 45.0%
CTCCCAAATGTTAGTGAGAG+AGG + chr1_3:7495802-7495821 Msa0100990:CDS 45.0%
ATGTTAGTGAGAGAGGCTTC+TGG + chr1_3:7495809-7495828 Msa0100990:CDS 45.0%
TGTTAGTGAGAGAGGCTTCT+GGG + chr1_3:7495810-7495829 Msa0100990:CDS 45.0%
GATGTTGGGATTGAAGCTGT+TGG + chr1_3:7495901-7495920 Msa0100990:CDS 45.0%
TGGGATTGAAGCTGTTGGAA+AGG + chr1_3:7495906-7495925 Msa0100990:CDS 45.0%
GGGATTGAAGCTGTTGGAAA+GGG + chr1_3:7495907-7495926 Msa0100990:CDS 45.0%
TGTGGCACTCTTCCAATTGT+AGG - chr1_3:7496029-7496048 None:intergenic 45.0%
GACGCCGAAAAACCCAAATT+GGG - chr1_3:7496058-7496077 None:intergenic 45.0%
!! TTCGGCGTCCTTTTTAACTG+TGG + chr1_3:7496069-7496088 Msa0100990:CDS 45.0%
TTATCGATCTGTAACTGCCC+TGG + chr1_3:7496189-7496208 Msa0100990:CDS 45.0%
ATCTGTAACTGCCCTGGATT+TGG + chr1_3:7496195-7496214 Msa0100990:CDS 45.0%
AACGCTACCCTTTCTGTACT+CGG + chr1_3:7496219-7496238 Msa0100990:CDS 45.0%
TTAAGGGAGTCACAGATGCT+GGG + chr1_3:7496283-7496302 Msa0100990:CDS 45.0%
CGACAAAGTAGTTTCATCCC+TGG + chr1_3:7496377-7496396 Msa0100990:CDS 45.0%
! TATCTGTTTTGCGTGTGCCA+GGG - chr1_3:7496553-7496572 None:intergenic 45.0%
! TTATCTGTTTTGCGTGTGCC+AGG - chr1_3:7496554-7496573 None:intergenic 45.0%
! TGGCCCAATTTTCTCAAAGC+GGG - chr1_3:7496630-7496649 None:intergenic 45.0%
! GTGGCCCAATTTTCTCAAAG+CGG - chr1_3:7496631-7496650 None:intergenic 45.0%
! AAAATTGGGCCACACCCTTT+TGG + chr1_3:7496638-7496657 Msa0100990:CDS 45.0%
! AAATTGGGCCACACCCTTTT+GGG + chr1_3:7496639-7496658 Msa0100990:CDS 45.0%
TGATCATCATCCAGTGACTC+GGG + chr1_3:7496852-7496871 Msa0100990:three_prime_UTR 45.0%
GACTGCATACTCCGGAAAAA+GGG - chr1_3:7496879-7496898 None:intergenic 45.0%
TGACTGCATACTCCGGAAAA+AGG - chr1_3:7496880-7496899 None:intergenic 45.0%
! TCTCTGAGAACACAACTACC+GGG + chr1_3:7496988-7497007 Msa0100990:three_prime_UTR 45.0%
AGATTCCTAACTCCAGAACC+CGG - chr1_3:7497009-7497028 None:intergenic 45.0%
!!! GGCACCTGATGTTTTTAGCT+CGG + chr1_3:7497044-7497063 Msa0100990:three_prime_UTR 45.0%
! ATCTGTACCACGGTGTCAAT+AGG + chr1_3:7497123-7497142 Msa0100990:three_prime_UTR 45.0%
CAAAACACCTATTGACACCG+TGG - chr1_3:7497133-7497152 None:intergenic 45.0%
!!! AGGTGTTTTGACTCAAACGG+AGG + chr1_3:7497143-7497162 Msa0100990:three_prime_UTR 45.0%
! ACATGTATAACTTGCCGCCA+CGG - chr1_3:7497248-7497267 None:intergenic 45.0%
!!! ATTTTTTTATGAATTAATTA+TGG + chr1_3:7494420-7494439 Msa0100990:intron 5.0%
!!! TTTTTTTATGAATTAATTAT+GGG + chr1_3:7494421-7494440 Msa0100990:intron 5.0%
GCACCCATGTCTCAAGTCTT+CGG + chr1_3:7494221-7494240 Msa0100990:exon 50.0%
! ACACGTGATCTCTTCTGAGG+TGG - chr1_3:7494935-7494954 None:intergenic 50.0%
CTGACACGTGATCTCTTCTG+AGG - chr1_3:7494938-7494957 None:intergenic 50.0%
! GGTTGCCTGTTGGTGAAGAA+AGG + chr1_3:7495053-7495072 Msa0100990:CDS 50.0%
GCACTCCTTTCTTCACCAAC+AGG - chr1_3:7495061-7495080 None:intergenic 50.0%
CTGCTTGTGTTTCCAAACGC+TGG + chr1_3:7495083-7495102 Msa0100990:CDS 50.0%
! CAGAAGCATAAGCCAGCGTT+TGG - chr1_3:7495098-7495117 None:intergenic 50.0%
CTGTGAAGAGTTTGGAGGTG+AGG + chr1_3:7495192-7495211 Msa0100990:CDS 50.0%
TACCTTTCCCGAAGCTTGGA+AGG + chr1_3:7495217-7495236 Msa0100990:CDS 50.0%
TTCCTTCCAAGCTTCGGGAA+AGG - chr1_3:7495222-7495241 None:intergenic 50.0%
CCGAAGCTTGGAAGGAAAGA+AGG + chr1_3:7495225-7495244 Msa0100990:CDS 50.0%
ACTGCATCACGAGGAGGATT+AGG + chr1_3:7495283-7495302 Msa0100990:CDS 50.0%
CTGCATCACGAGGAGGATTA+GGG + chr1_3:7495284-7495303 Msa0100990:CDS 50.0%
GGTCTCAAAGCAGTTGCTAG+TGG + chr1_3:7495355-7495374 Msa0100990:CDS 50.0%
ATGCCCTGCAATTTCCGACA+AGG + chr1_3:7495489-7495508 Msa0100990:CDS 50.0%
GATTCCTTGATCCCCAACAC+CGG - chr1_3:7495653-7495672 None:intergenic 50.0%
TGAGAGAGGCTTCTGGGTTA+TGG + chr1_3:7495816-7495835 Msa0100990:CDS 50.0%
GAGAGAGGCTTCTGGGTTAT+GGG + chr1_3:7495817-7495836 Msa0100990:CDS 50.0%
CTCACAATTGCATCCTGCAG+AGG + chr1_3:7495871-7495890 Msa0100990:CDS 50.0%
! AACATCGGTTACTCCTCTGC+AGG - chr1_3:7495887-7495906 None:intergenic 50.0%
TGCAGAGGAGTAACCGATGT+TGG + chr1_3:7495886-7495905 Msa0100990:CDS 50.0%
GCAGAGGAGTAACCGATGTT+GGG + chr1_3:7495887-7495906 Msa0100990:CDS 50.0%
GGACGCCGAAAAACCCAAAT+TGG - chr1_3:7496059-7496078 None:intergenic 50.0%
!! GGTAAGCTGCTTTGGGATCA+AGG + chr1_3:7496116-7496135 Msa0100990:CDS 50.0%
!! CTGCTTTGGGATCAAGGATC+TGG + chr1_3:7496122-7496141 Msa0100990:CDS 50.0%
TGGGATCAAGGATCTGGACT+TGG + chr1_3:7496128-7496147 Msa0100990:CDS 50.0%
CTTAAGGGAGTCACAGATGC+TGG + chr1_3:7496282-7496301 Msa0100990:CDS 50.0%
TCATCCCTGGTCAATCTGCA+TGG + chr1_3:7496390-7496409 Msa0100990:CDS 50.0%
CCAACCATGCAGATTGACCA+GGG - chr1_3:7496397-7496416 None:intergenic 50.0%
TCCAACCATGCAGATTGACC+AGG - chr1_3:7496398-7496417 None:intergenic 50.0%
TTGTGTGCGATCTCCGATTC+CGG + chr1_3:7496519-7496538 Msa0100990:CDS 50.0%
TTCTCTGTCAGGCTGCACTT+TGG + chr1_3:7496587-7496606 Msa0100990:CDS 50.0%
GTCAGGCTGCACTTTGGTTA+CGG + chr1_3:7496593-7496612 Msa0100990:CDS 50.0%
AGAACACAACTACCGGGTTC+TGG + chr1_3:7496994-7497013 Msa0100990:three_prime_UTR 50.0%
!! AACTACCGGGTTCTGGAGTT+AGG + chr1_3:7497001-7497020 Msa0100990:three_prime_UTR 50.0%
CAACTTGAGGGCCAAGAGAC+AGG - chr1_3:7494901-7494920 None:intergenic 55.0%
GGGATACCTTTCCCGAAGCT+TGG + chr1_3:7495213-7495232 Msa0100990:CDS 55.0%
GCAGTTGGAACTGCATCACG+AGG + chr1_3:7495274-7495293 Msa0100990:CDS 55.0%
GTTGGAACTGCATCACGAGG+AGG + chr1_3:7495277-7495296 Msa0100990:CDS 55.0%
! CGCGTTCTGAGTTGCTTCCA+CGG - chr1_3:7495321-7495340 None:intergenic 55.0%
CGTGGAAGCAACTCAGAACG+CGG + chr1_3:7495319-7495338 Msa0100990:CDS 55.0%
! ATCAAGGACTGTGCCGGTGT+TGG + chr1_3:7495637-7495656 Msa0100990:CDS 55.0%
! TCAAGGACTGTGCCGGTGTT+GGG + chr1_3:7495638-7495657 Msa0100990:CDS 55.0%
GTTGGGGATCAAGGAATCGC+TGG + chr1_3:7495655-7495674 Msa0100990:CDS 55.0%
GGGTAGCGTTGCCAAATCCA+GGG - chr1_3:7496209-7496228 None:intergenic 55.0%
AGGGTAGCGTTGCCAAATCC+AGG - chr1_3:7496210-7496229 None:intergenic 55.0%
TCCATTGCTTGAGAGCTCCG+AGG + chr1_3:7496311-7496330 Msa0100990:CDS 55.0%
CCCTGGTCAATCTGCATGGT+TGG + chr1_3:7496394-7496413 Msa0100990:CDS 55.0%
GGAATCGGAGATCGCACACA+AGG - chr1_3:7496520-7496539 None:intergenic 55.0%
TGTGTGCGATCTCCGATTCC+GGG + chr1_3:7496520-7496539 Msa0100990:CDS 55.0%
GCTGCACTTTGGTTACGGAC+AGG + chr1_3:7496598-7496617 Msa0100990:CDS 55.0%
GAAAAAGGGACCCGAGTCAC+TGG - chr1_3:7496865-7496884 None:intergenic 55.0%
!! GTGACTCGGGTCCCTTTTTC+CGG + chr1_3:7496865-7496884 Msa0100990:three_prime_UTR 55.0%
!!! AGCCTTGTTTTCGAGGGCCT+TGG + chr1_3:7497222-7497241 Msa0100990:three_prime_UTR 55.0%
GAACGCGGCGTGACAACTCT+AGG + chr1_3:7495334-7495353 Msa0100990:CDS 60.0%
! CAAGGACTGTGCCGGTGTTG+GGG + chr1_3:7495639-7495658 Msa0100990:CDS 60.0%
! TGTGCCGGTGTTGGGGATCA+AGG + chr1_3:7495646-7495665 Msa0100990:CDS 60.0%
GCCTCGGAGCTCTCAAGCAA+TGG - chr1_3:7496315-7496334 None:intergenic 60.0%
TTGCTTGAGAGCTCCGAGGC+TGG + chr1_3:7496315-7496334 Msa0100990:CDS 60.0%
CAGGGCTGCTATCCCGGAAT+CGG - chr1_3:7496535-7496554 None:intergenic 60.0%
GGCCAAGGCCCTCGAAAACA+AGG - chr1_3:7497227-7497246 None:intergenic 60.0%
! ATAACTTGCCGCCACGGCCA+AGG - chr1_3:7497242-7497261 None:intergenic 60.0%
CGATTCCGGGATAGCAGCCC+TGG + chr1_3:7496533-7496552 Msa0100990:CDS 65.0%
GTGTGCCAGGGCTGCTATCC+CGG - chr1_3:7496541-7496560 None:intergenic 65.0%
!! GTTTTCGAGGGCCTTGGCCG+TGG + chr1_3:7497228-7497247 Msa0100990:three_prime_UTR 65.0%
TTCGAGGGCCTTGGCCGTGG+CGG + chr1_3:7497231-7497250 Msa0100990:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7493869 7497527 7493869 ID=Msa0100990;Name=Msa0100990
chr1_3 mRNA 7493869 7497527 7493869 ID=Msa0100990-mRNA-1;Parent=Msa0100990;Name=Msa0100990-mRNA-1;_AED=0.00;_eAED=0.00;_QI=358|1|1|1|0|0|2|778|643
chr1_3 exon 7493869 7494251 7493869 ID=Msa0100990-mRNA-1:exon:2952;Parent=Msa0100990-mRNA-1
chr1_3 exon 7494843 7497527 7494843 ID=Msa0100990-mRNA-1:exon:2953;Parent=Msa0100990-mRNA-1
chr1_3 five_prime_UTR 7493869 7494226 7493869 ID=Msa0100990-mRNA-1:five_prime_utr;Parent=Msa0100990-mRNA-1
chr1_3 CDS 7494227 7494251 7494227 ID=Msa0100990-mRNA-1:cds;Parent=Msa0100990-mRNA-1
chr1_3 CDS 7494843 7496749 7494843 ID=Msa0100990-mRNA-1:cds;Parent=Msa0100990-mRNA-1
chr1_3 three_prime_UTR 7496750 7497527 7496750 ID=Msa0100990-mRNA-1:three_prime_utr;Parent=Msa0100990-mRNA-1
Gene Sequence

>Msa0100990

ATGTCTCAAGTCTTCGGCTTTTCTGGTGATAACTTTTGCCATGGTGGGTTATACACAAACCCCAAGGAAGCAAATTTCTTCCTGTCTCTTGGCCCTCAAGTTGATGTCTACTATCCACCTCAGAAGAGATCACGTGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTTGAGCAGAAGCAGAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAAAGGAGTGCATCTGCTTGTGTTTCCAAACGCTGGCTTATGCTTCTGAGCAATATTTGCAAGAGTGAAATCTGTAGCAACAAAAGTACCTCCTCAAATGACGAGAATAAAATGGAAAGTGACTGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGAAGCTTGGAAGGAAAGAAGGCAACCGATGTTAGACTTGCTGCTATTGCAGTTGGAACTGCATCACGAGGAGGATTAGGGAAGCTTTCAATCCGTGGAAGCAACTCAGAACGCGGCGTGACAACTCTAGGTCTCAAAGCAGTTGCTAGTGGATGTCCTTCTCTAAAGTCTTTCTCTTTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTTATTGAGATCGCTAATGGATGTCAAAAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCCGACAAGGCTTTAATCGCAGTTGCAAAGAAGTGTCCGACTCTGACCGAGTTATCATTAGAGTCTTGTCCTAGCATTCGCAATGAAGGTCTACAAGCCATTGGAAAGTTCTGCCCAAATCTTAAGGTTATATCTATCAAGGACTGTGCCGGTGTTGGGGATCAAGGAATCGCTGGCCTGTTTTCTTCGACTTCTTTGGTTCTGACAAAGGTGAAGCTTCAAGCACTGGCCGTTTCTGATCTCTCTCTAGCTGTTATTGGACACTATGGCAAAACAGTTACCGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGAGGCTTCTGGGTTATGGGAAATGCTAATGGATTGCATAAACTGAAGTCACTCACAATTGCATCCTGCAGAGGAGTAACCGATGTTGGGATTGAAGCTGTTGGAAAGGGCTGTCCTAATTTGAAAAGCGTACATCTTCATAAGTGTGCATTTCTCTCAGACAACGGATTGATTTCATTCACCAAGGCTGCTATATCACTTGAAAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTTTTTCTATGGTAAGCTGCTTTGGGATCAAGGATCTGGACTTGGAATTGTCACCTGTATCTCATTGTGAATCACTTCGTTCATTATCGATCTGTAACTGCCCTGGATTTGGCAACGCTACCCTTTCTGTACTCGGAAAGTTGTGCCCTCAGCTTCAACAAGTTGAATTAACTGGACTTAAGGGAGTCACAGATGCTGGGTTGCTTCCATTGCTTGAGAGCTCCGAGGCTGGTCTTGTTAAAGTTAATCTCAGTGGTTGCATCAATCTTACCGACAAAGTAGTTTCATCCCTGGTCAATCTGCATGGTTGGACTCTCGAAATTCTGAACCTTGAAGGTTGTAAAAATATCAGCAATGCTAGCTTGATAGCAATTGCTGAGCATTGCCAATTGCTTTGTGATCTTGATGTTTCCTTGTGTGCGATCTCCGATTCCGGGATAGCAGCCCTGGCACACGCAAAACAGATAAATCTACAGATTCTTTCTCTGTCAGGCTGCACTTTGGTTACGGACAGGAGCTTACCCGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTAAATATCCAGCATTGCAATTCAATCAGCAGCAGCGCTGTTGAGATGCTTGTTGAACATCTTTGGAGGTGTGACATCCTTTCCTGA
Protein sequence

>Msa0100990

MSQVFGFSGDNFCHGGLYTNPKEANFFLSLGPQVDVYYPPQKRSRVSVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNICKSEICSNKSTSSNDENKMESDCEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSERGVTTLGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALIAVAKKCPTLTELSLESCPSIRNEGLQAIGKFCPNLKVISIKDCAGVGDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNANGLHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKAFSMVSCFGIKDLDLELSPVSHCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCINLTDKVVSSLVNLHGWTLEILNLEGCKNISNASLIAIAEHCQLLCDLDVSLCAISDSGIAALAHAKQINLQILSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSAVEMLVEHLWRCDILS*