AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055310 MtrunA17_Chr1g0149351 97.201 643 18 0 1 643 1 643 0.0 1256
Msa0055310 MtrunA17_Chr3g0137771 66.047 645 211 4 1 642 1 640 0.0 833
Msa0055310 MtrunA17_Chr4g0063841 61.066 619 231 4 29 643 21 633 0.0 702
Msa0055310 MtrunA17_Chr4g0063861 57.949 390 163 1 254 643 2 390 8.93e-151 441
Msa0055310 MtrunA17_Chr4g0063861 23.399 406 254 10 180 557 6 382 9.28e-17 82.8
Msa0055310 MtrunA17_Chr4g0063851 63.014 146 49 1 35 180 30 170 6.12e-51 176
Msa0055310 MtrunA17_Chr2g0286991 27.258 598 370 17 68 633 11 575 1.40e-39 154
Msa0055310 MtrunA17_Chr2g0286991 27.536 414 260 11 145 558 205 578 6.62e-28 119
Msa0055310 MtrunA17_Chr2g0286991 28.409 264 180 4 145 408 334 588 1.10e-24 108
Msa0055310 MtrunA17_Chr4g0004901 29.505 505 294 21 129 606 162 631 6.28e-30 125
Msa0055310 MtrunA17_Chr4g0004901 28.529 340 205 9 175 513 366 668 5.91e-29 122
Msa0055310 MtrunA17_Chr4g0004901 26.347 334 212 11 321 628 124 449 5.74e-14 75.5
Msa0055310 MtrunA17_Chr7g0272131 29.478 441 274 13 191 606 186 614 1.54e-28 121
Msa0055310 MtrunA17_Chr7g0272131 27.115 461 273 14 205 611 92 543 1.97e-22 102
Msa0055310 MtrunA17_Chr7g0272131 28.745 247 171 4 176 422 350 591 1.07e-19 93.6
Msa0055310 MtrunA17_Chr7g0272131 27.273 264 179 6 174 433 399 653 1.92e-17 86.3
Msa0055310 MtrunA17_Chr7g0272131 24.029 412 253 12 180 544 277 675 3.82e-17 85.5
Msa0055310 MtrunA17_Chr1g0212071 26.862 376 259 8 66 436 18 382 6.88e-26 110
Msa0055310 MtrunA17_Chr1g0212071 28.968 252 171 4 142 391 145 390 6.27e-20 92.8
Msa0055310 MtrunA17_Chr1g0212071 25.625 320 206 8 252 569 93 382 1.13e-19 92.0
Msa0055310 MtrunA17_Chr1g0212071 25.143 350 195 7 202 518 95 410 2.73e-19 90.9
Msa0055310 MtrunA17_Chr1g0212071 29.050 179 124 3 455 632 110 286 3.65e-13 72.0
Msa0055310 MtrunA17_Chr8g0347711 28.184 369 234 7 63 417 10 361 1.01e-24 106
Msa0055310 MtrunA17_Chr8g0347711 28.000 300 185 8 360 635 75 367 6.65e-17 83.2
Msa0055310 MtrunA17_Chr4g0008501 22.991 448 296 14 166 588 145 568 6.44e-20 94.0
Msa0055310 MtrunA17_Chr3g0125671 29.474 190 107 2 210 399 123 285 1.32e-18 88.2
Msa0055310 MtrunA17_Chr3g0125671 31.655 139 92 2 174 311 192 328 8.95e-11 64.3
Msa0055310 MtrunA17_Chr1g0159531 26.577 222 124 3 204 413 105 299 1.06e-17 85.1
Msa0055310 MtrunA17_Chr1g0159531 27.751 209 140 2 180 377 107 315 1.90e-14 75.5
Msa0055310 MtrunA17_Chr1g0159531 26.866 201 108 3 143 307 128 325 9.13e-12 67.0
Msa0055310 MtrunA17_Chr1g0150971 25.666 413 237 15 188 582 339 699 1.32e-17 87.4
Msa0055310 MtrunA17_Chr1g0150971 25.042 595 270 22 180 630 377 939 4.00e-14 76.3
Msa0055310 MtrunA17_Chr4g0002671 23.283 597 354 17 65 609 3 547 6.01e-16 81.3
Msa0055310 MtrunA17_Chr1g0176031 22.830 311 176 5 228 533 92 343 7.30e-16 79.7
Msa0055310 MtrunA17_Chr1g0176031 27.907 301 196 12 336 634 58 339 8.17e-15 76.3
Msa0055310 MtrunA17_Chr1g0176031 29.208 202 137 5 174 374 120 316 1.19e-14 75.9
Msa0055310 MtrunA17_Chr1g0176031 25.820 244 169 7 319 558 79 314 2.05e-14 75.1
Msa0055310 MtrunA17_Chr1g0176031 24.275 276 195 6 191 457 81 351 9.85e-12 67.0
Msa0055310 MtrunA17_Chr1g0150991 25.657 495 281 20 162 633 158 588 4.98e-14 75.5
Msa0055310 MtrunA17_Chr5g0432971 22.414 406 265 9 216 609 199 566 8.87e-14 74.7
Msa0055310 MtrunA17_Chr4g0018891 25.562 356 201 13 202 555 189 482 4.82e-13 72.0
Msa0055310 MtrunA17_Chr5g0446541 21.868 471 299 15 176 609 145 583 5.17e-12 68.9
Msa0055310 MtrunA17_Chr1g0152951 23.729 295 199 9 201 484 137 416 8.48e-12 68.2
Msa0055310 MtrunA17_Chr4g0073771 30.168 179 109 6 229 405 102 266 1.14e-11 66.2
Msa0055310 MtrunA17_Chr4g0070541 25.090 279 195 8 346 618 397 667 1.87e-11 67.4
Msa0055310 MtrunA17_Chr4g0053361 24.706 340 216 10 200 506 118 450 2.13e-11 67.0
Msa0055310 MtrunA17_Chr4g0053361 24.691 405 232 14 224 620 116 455 7.13e-11 65.1
Msa0055310 MtrunA17_Chr1g0211631 23.950 238 149 4 174 409 296 503 2.41e-11 67.0
Msa0055310 MtrunA17_Chr3g0077831 22.286 350 218 10 202 541 192 497 6.79e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055310 AT2G25490.1 60.681 646 233 8 1 643 1 628 0.0 764
Msa0055310 AT5G25350.1 58.696 644 242 8 1 642 1 622 0.0 696
Msa0055310 AT4G15475.1 29.289 577 374 19 68 642 11 555 1.79e-46 174
Msa0055310 AT4G15475.1 26.176 340 242 4 125 460 252 586 3.43e-30 126
Msa0055310 AT4G15475.1 26.166 386 245 10 145 503 205 577 1.26e-25 112
Msa0055310 AT5G27920.1 27.500 480 300 12 183 631 140 602 9.48e-31 128
Msa0055310 AT5G27920.1 24.270 445 278 14 217 609 67 504 1.47e-19 93.6
Msa0055310 AT5G23340.1 26.780 295 185 4 306 599 85 349 2.69e-25 109
Msa0055310 AT5G23340.1 23.967 363 266 5 66 426 8 362 7.69e-23 102
Msa0055310 AT5G23340.1 25.281 356 220 8 175 521 84 402 4.47e-18 87.4
Msa0055310 AT5G01720.1 27.397 511 284 16 176 610 85 584 9.93e-23 103
Msa0055310 AT5G01720.1 26.882 372 207 10 129 500 274 580 6.02e-21 97.8
Msa0055310 AT5G01720.1 26.923 208 117 5 176 381 444 618 4.26e-14 76.3
Msa0055310 AT5G01720.1 27.301 326 227 9 307 632 61 376 1.78e-12 70.9
Msa0055310 AT1G21410.2 25.305 328 161 8 204 531 106 349 4.36e-19 89.7
Msa0055310 AT1G21410.2 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0055310 AT1G21410.2 23.256 215 148 2 180 377 108 322 5.40e-13 71.2
Msa0055310 AT1G21410.1 25.305 328 161 8 204 531 106 349 4.36e-19 89.7
Msa0055310 AT1G21410.1 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0055310 AT1G21410.1 23.256 215 148 2 180 377 108 322 5.40e-13 71.2
Msa0055310 AT1G77000.2 29.082 196 112 2 204 399 106 274 3.24e-18 87.4
Msa0055310 AT1G77000.2 25.641 234 140 4 180 379 108 341 8.03e-15 77.0
Msa0055310 AT1G77000.1 29.082 196 112 2 204 399 106 274 3.24e-18 87.4
Msa0055310 AT1G77000.1 25.641 234 140 4 180 379 108 341 8.03e-15 77.0
Msa0055310 AT4G33210.1 23.830 470 265 16 131 570 289 695 5.05e-17 85.9
Msa0055310 AT3G07550.1 24.090 357 259 6 62 413 12 361 4.95e-16 80.9
Msa0055310 AT3G07550.1 24.367 316 196 8 193 500 62 342 2.19e-12 69.7
Msa0055310 AT3G07550.1 28.094 299 169 9 348 641 118 375 1.06e-11 67.8
Msa0055310 AT3G07550.2 24.090 357 259 6 62 413 12 361 4.95e-16 80.9
Msa0055310 AT3G07550.2 24.367 316 196 8 193 500 62 342 2.19e-12 69.7
Msa0055310 AT3G07550.2 28.094 299 169 9 348 641 118 375 1.06e-11 67.8
Msa0055310 AT3G58530.1 25.095 263 155 9 180 439 128 351 2.72e-15 78.2
Msa0055310 AT3G58530.1 27.090 299 177 10 347 638 81 345 5.86e-15 77.4
Msa0055310 AT3G58530.1 21.283 343 207 6 193 530 58 342 6.65e-15 77.0
Msa0055310 AT3G07550.3 23.596 356 243 6 58 413 8 334 2.35e-14 75.5
Msa0055310 AT3G07550.3 24.042 287 182 7 215 500 64 315 5.80e-12 68.2
Msa0055310 AT3G07550.3 28.094 299 169 9 348 641 91 348 7.59e-12 67.8
Msa0055310 AT2G06040.1 24.911 281 200 6 337 610 473 749 1.53e-13 74.7
Msa0055310 AT1G80630.1 23.134 402 236 9 200 569 148 508 3.01e-13 73.2
Msa0055310 AT1G55590.1 24.444 225 165 4 172 394 294 515 5.36e-13 72.4
Msa0055310 AT1G47056.1 23.913 460 294 16 41 492 15 426 7.26e-13 72.0
Msa0055310 AT1G47056.1 28.082 292 142 8 347 581 130 410 2.69e-11 67.0
Msa0055310 AT4G07400.1 30.667 150 76 3 177 299 330 478 1.41e-12 71.2
Msa0055310 AT3G50080.1 24.222 450 259 16 57 500 33 406 2.00e-12 70.5
Msa0055310 AT1G77000.3 26.087 184 83 3 204 387 106 236 5.66e-12 67.0
Msa0055310 AT1G77000.4 26.087 184 83 3 204 387 106 236 5.66e-12 67.0

Find 205 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAAGTCTTTCTCTTTA+TGG 0.012962 1_2:-10265299 Msa0055310:CDS
TGCCACAGAATTACCCAATT+TGG 0.171018 1_2:-10264643 Msa0055310:CDS
CTTACCCGCTTTGAGAAAAT+TGG 0.171059 1_2:-10264062 Msa0055310:CDS
TTGGAAACCCTAATTGAAAT+AGG 0.191955 1_2:+10266635 None:intergenic
GATCTCTCTCTAGCTGTTAT+TGG 0.220084 1_2:-10264946 Msa0055310:CDS
TAACATTTGGGAGGAAATTA+AGG 0.226363 1_2:+10264893 None:intergenic
TGACTGCATACTCCGGAAAA+AGG 0.239112 1_2:+10263808 None:intergenic
TGTTATGAAATCGTGGAAAT+TGG 0.244856 1_2:+10266616 None:intergenic
ATAGATATAACCTTAAGATT+TGG 0.265371 1_2:+10265069 None:intergenic
TTAGGAATCTTTGTTACTTT+GGG 0.266239 1_2:-10263666 Msa0055310:three_prime_UTR
TCGGTATTAGTGCTCTTGTT+AGG 0.269533 1_2:-10263517 Msa0055310:three_prime_UTR
CTTCAACAAGTTGAATTAAC+TGG 0.274879 1_2:-10264427 Msa0055310:CDS
TGATCAAGACCCAAAGTTAA+TGG 0.275780 1_2:+10263850 None:intergenic
CCTTCTTTCCTTCCAAGCTT+CGG 0.280846 1_2:+10265460 None:intergenic
TGAGAGAGGCTTCTGGGTTA+TGG 0.281774 1_2:-10264869 Msa0055310:CDS
ATCTGTAACTGCCCTGGATT+TGG 0.285015 1_2:-10264490 Msa0055310:CDS
CAGGAAGAAATTTGCTTCCT+TGG 0.285276 1_2:+10265806 None:intergenic
TTGTGTGCGATCTCCGATTC+CGG 0.288491 1_2:-10264166 Msa0055310:CDS
AATATCAAAACAAATGCTTT+TGG 0.289474 1_2:+10263227 None:intergenic
CTTCTTTCCTTCCAAGCTTC+GGG 0.291790 1_2:+10265461 None:intergenic
CTCAAATGACGAGAATAAAA+TGG 0.294170 1_2:-10265523 Msa0055310:CDS
ACTGCATCACGAGGAGGATT+AGG 0.301726 1_2:-10265402 Msa0055310:CDS
TTAATCTCACACGGCAATTT+AGG 0.302140 1_2:-10263925 Msa0055310:three_prime_UTR
GAGATTAAATCTTGCAGTTC+AGG 0.305334 1_2:+10263940 None:intergenic
AAAATTGGGCCACACCCTTT+TGG 0.309297 1_2:-10264047 Msa0055310:CDS
GAGATATGCAGCCATTTAAA+AGG 0.313992 1_2:+10263716 None:intergenic
TTTCTATGGTAAGCTGCTTT+GGG 0.317243 1_2:-10264576 Msa0055310:CDS
TGTGGCACTCTTCCAATTGT+AGG 0.329715 1_2:+10264659 None:intergenic
TCAAGGACTGTGCCGGTGTT+GGG 0.330559 1_2:-10265047 Msa0055310:CDS
GTTAGGAATCTTTGTTACTT+TGG 0.334438 1_2:-10263667 Msa0055310:three_prime_UTR
AGATGCTTGTTGAACATCTT+TGG 0.338078 1_2:-10263979 Msa0055310:CDS
TAGATATAACCTTAAGATTT+GGG 0.344478 1_2:+10265070 None:intergenic
CTTTGGAGGGTTGTTTCAGC+TGG 0.345856 1_2:-10266487 Msa0055310:five_prime_UTR
GCCACAGAATTACCCAATTT+GGG 0.348800 1_2:-10264642 Msa0055310:CDS
GTTGAATTAACTGGACTTAA+GGG 0.349439 1_2:-10264418 Msa0055310:CDS
AGGAAGAAATTTGCTTCCTT+GGG 0.350453 1_2:+10265807 None:intergenic
AGAACACAACTACCGGGTTC+TGG 0.350941 1_2:-10263691 Msa0055310:three_prime_UTR
GCAAATTTCTTCCTGTCTCT+TGG 0.351075 1_2:-10265798 Msa0055310:CDS
CTCGAAATTCTGAACCTTGA+AGG 0.357149 1_2:-10264265 Msa0055310:CDS
ATGTTAGTGAGAGAGGCTTC+TGG 0.357800 1_2:-10264876 Msa0055310:CDS
AAGCCTCTCTCACTAACATT+TGG 0.362156 1_2:+10264880 None:intergenic
AGTTGAATTAACTGGACTTA+AGG 0.362492 1_2:-10264419 Msa0055310:CDS
ATCTGCCCTTTGTGTTTGTA+TGG 0.364723 1_2:-10263290 Msa0055310:three_prime_UTR
GTTTCTTCTGTTGGTGATGA+AGG 0.367259 1_2:-10265273 Msa0055310:CDS
GATAGTGACTGTGAAGAGTT+TGG 0.369471 1_2:-10265501 Msa0055310:CDS
TTATGGAATGTTTCTTCTGT+TGG 0.375011 1_2:-10265282 Msa0055310:CDS
GAGAGAGGCTTCTGGGTTAT+GGG 0.375727 1_2:-10264868 Msa0055310:CDS
GCCTCTTTGAGATCTTTAGA+AGG 0.392355 1_2:-10265653 Msa0055310:CDS
TGGGTTATGGGAAATGCTAA+TGG 0.394159 1_2:-10264856 Msa0055310:CDS
TTAGGGTTGTTGCAGTTGTC+TGG 0.399270 1_2:-10263499 Msa0055310:three_prime_UTR
GTCAGGCTGCACTTTGGTTA+CGG 0.399322 1_2:-10264092 Msa0055310:CDS
CCCTGGTCAATCTGCATGGT+TGG 0.402559 1_2:-10264291 Msa0055310:CDS
ATCCATTAGCGATCTCAATA+AGG 0.403036 1_2:+10265250 None:intergenic
TGTGTGCGATCTCCGATTCC+GGG 0.408544 1_2:-10264165 Msa0055310:CDS
CGGTATTAGTGCTCTTGTTA+GGG 0.411071 1_2:-10263516 Msa0055310:three_prime_UTR
ATCACTTGAAAGCCTACAAT+TGG 0.412655 1_2:-10264671 Msa0055310:CDS
CCAAAGAAGTCGAAGAAAAC+AGG 0.414246 1_2:+10265007 None:intergenic
CTGCATCACGAGGAGGATTA+GGG 0.415640 1_2:-10265401 Msa0055310:CDS
TGGAAACCCTAATTGAAATA+GGG 0.415958 1_2:+10266636 None:intergenic
AGCCTCTCTCACTAACATTT+GGG 0.422860 1_2:+10264881 None:intergenic
GTGTGCCAGGGCTGCTATCC+CGG 0.423492 1_2:+10264147 None:intergenic
CTTAAGGGAGTCACAGATGC+TGG 0.425211 1_2:-10264403 Msa0055310:CDS
GGCCTTATTGAGATCGCTAA+TGG 0.425507 1_2:-10265252 Msa0055310:CDS
CATCAAGATCACAAAGCAAT+TGG 0.425806 1_2:+10264194 None:intergenic
ATCTCAAAGAGGCACTCATC+TGG 0.426649 1_2:+10265663 None:intergenic
AAAGTTCTGCCCAAATCTTA+AGG 0.427807 1_2:-10265079 Msa0055310:CDS
CTACAGATTCTTTCTCTGTC+AGG 0.430438 1_2:-10264109 Msa0055310:CDS
ATTTGATTTGTGAGTATTGA+AGG 0.431110 1_2:+10266550 None:intergenic
CGATTCCGGGATAGCAGCCC+TGG 0.432829 1_2:-10264152 Msa0055310:CDS
TGTTAGTGAGAGAGGCTTCT+GGG 0.434709 1_2:-10264875 Msa0055310:CDS
AGGGTAGCGTTGCCAAATCC+AGG 0.436782 1_2:+10264478 None:intergenic
TTAATGAACCATTCATTGTA+TGG 0.438116 1_2:-10266777 Msa0055310:five_prime_UTR
CATTCTCCATCGAAAACAAA+TGG 0.441047 1_2:+10265723 None:intergenic
AACTGCGATTAAAGCCTTGT+CGG 0.441499 1_2:+10265182 None:intergenic
TTACCCGCTTTGAGAAAATT+GGG 0.441746 1_2:-10264061 Msa0055310:CDS
AAAGCCTTGTCGGAAATTGC+AGG 0.442003 1_2:+10265192 None:intergenic
AACTACCGGGTTCTGGAGTT+AGG 0.442050 1_2:-10263684 Msa0055310:three_prime_UTR
TAACTGTGGTGCAAAATTGA+AGG 0.443191 1_2:-10264602 Msa0055310:CDS
CAGAAGCATAAGCCAGCGTT+TGG 0.444467 1_2:+10265590 None:intergenic
GAATCTTTGTTACTTTGGGT+TGG 0.446597 1_2:-10263662 Msa0055310:three_prime_UTR
CTGCTTTGGGATCAAGGATC+TGG 0.448619 1_2:-10264563 Msa0055310:CDS
GCACTCCTTTCTTCACCAAC+AGG 0.449873 1_2:+10265627 None:intergenic
GGTAAGCTGCTTTGGGATCA+AGG 0.450353 1_2:-10264569 Msa0055310:CDS
GCTGGATATTTAGTCCCAAA+AGG 0.450825 1_2:+10264032 None:intergenic
ATCAAGGACTGTGCCGGTGT+TGG 0.452196 1_2:-10265048 Msa0055310:CDS
ATCTGTACCACGGTGTCAAT+AGG 0.457103 1_2:-10263562 Msa0055310:three_prime_UTR
CTAGCTGTTATTGGACACTA+TGG 0.460329 1_2:-10264937 Msa0055310:CDS
TTCAAGTGATATAGCAGCCT+TGG 0.460685 1_2:+10264684 None:intergenic
GGGATACCTTTCCCGAAGCT+TGG 0.461300 1_2:-10265472 Msa0055310:CDS
CAACTTGAGGGCCAAGAGAC+AGG 0.463141 1_2:+10265787 None:intergenic
TGTGCCGGTGTTGGGGATCA+AGG 0.466975 1_2:-10265039 Msa0055310:CDS
TTATCGATCTGTAACTGCCC+TGG 0.467205 1_2:-10264496 Msa0055310:CDS
CCGAAGCTTGGAAGGAAAGA+AGG 0.469354 1_2:-10265460 Msa0055310:CDS
AAGAAGTGTCCGACTCTGAC+CGG 0.473374 1_2:-10265156 Msa0055310:CDS
CTCCCAAATGTTAGTGAGAG+AGG 0.473423 1_2:-10264883 Msa0055310:CDS
CGCGTTCTGAGTTGCTTCCA+CGG 0.473495 1_2:+10265367 None:intergenic
ATCTCTGAGAACACAACTAC+CGG 0.477432 1_2:-10263698 Msa0055310:three_prime_UTR
CTGCTTGTGTTTCCAAACGC+TGG 0.478903 1_2:-10265602 Msa0055310:CDS
TGGGATCAAGGATCTGGACT+TGG 0.479690 1_2:-10264557 Msa0055310:CDS
AGACTTGCTGCTATTGCAGT+TGG 0.480536 1_2:-10265426 Msa0055310:CDS
CAGGGCTGCTATCCCGGAAT+CGG 0.488751 1_2:+10264153 None:intergenic
TTGCTTGAGAGCTCTGAGGC+TGG 0.490271 1_2:-10264370 Msa0055310:CDS
GCAGAGGAGTAACCGATGTT+GGG 0.492742 1_2:-10264798 Msa0055310:CDS
AACGCTACCCTTTCTGTACT+CGG 0.496998 1_2:-10264466 Msa0055310:CDS
ACGGATTCCCATACAATGAA+TGG 0.499139 1_2:+10266769 None:intergenic
TTGATCATCATCCAGTGACT+CGG 0.499367 1_2:-10263834 Msa0055310:three_prime_UTR
TTCTCTGTCAGGCTGCACTT+TGG 0.500531 1_2:-10264098 Msa0055310:CDS
TGTAAGAGACAAGTGGGAAA+CGG 0.500705 1_2:+10266750 None:intergenic
GGACCCATGTCTCAAGTCTT+CGG 0.505219 1_2:-10266466 Msa0055310:exon
CAGGGATGAAACTACTTTGT+CGG 0.506121 1_2:+10264309 None:intergenic
TCTTAAGGTTATATCTATCA+AGG 0.507799 1_2:-10265064 Msa0055310:CDS
TGCAGAGGAGTAACCGATGT+TGG 0.509560 1_2:-10264799 Msa0055310:CDS
GCCTCAGAGCTCTCAAGCAA+TGG 0.512849 1_2:+10264373 None:intergenic
AGTGATTCACAATGAGATAC+AGG 0.513908 1_2:+10264526 None:intergenic
GGTTGCCTGTTGGTGAAGAA+AGG 0.514240 1_2:-10265632 Msa0055310:CDS
GACTTCTTTGGTTCTGACAA+AGG 0.516837 1_2:-10264995 Msa0055310:CDS
TGCTGATTGAATTGCAATGC+TGG 0.518629 1_2:+10264014 None:intergenic
TTTGACTCAAACGGAGGTAT+CGG 0.518846 1_2:-10263536 Msa0055310:three_prime_UTR
AGACCTTCATTGCGAATGCT+AGG 0.519816 1_2:+10265114 None:intergenic
TGTCCTAGCATTCGCAATGA+AGG 0.520385 1_2:-10265117 Msa0055310:CDS
TAATGAACCATTCATTGTAT+GGG 0.522711 1_2:-10266776 Msa0055310:five_prime_UTR
GAACGCGGCGTGACAACTCT+AGG 0.525236 1_2:-10265351 Msa0055310:CDS
AAAGGTGAAGCTTCAAGCAC+TGG 0.528182 1_2:-10264977 Msa0055310:CDS
TACCTTTCCCGAAGCTTGGA+AGG 0.529475 1_2:-10265468 Msa0055310:CDS
CAAGGACTGTGCCGGTGTTG+GGG 0.530233 1_2:-10265046 Msa0055310:CDS
TGCTTGTTGAACATCTTTGG+AGG 0.531336 1_2:-10263976 Msa0055310:CDS
TTCCTTCCAAGCTTCGGGAA+AGG 0.533717 1_2:+10265466 None:intergenic
CTGGATATTTAGTCCCAAAA+GGG 0.534654 1_2:+10264033 None:intergenic
TCCAACCATGCAGATTGACC+AGG 0.536554 1_2:+10264290 None:intergenic
GGTCTCAAAGCAGTTGCTAG+TGG 0.537588 1_2:-10265330 Msa0055310:CDS
GGCCAAGGCCCTCGAAAACA+AGG 0.538671 1_2:+10263461 None:intergenic
AACATCGGTTACTCCTCTGC+AGG 0.539479 1_2:+10264801 None:intergenic
CAGAGGGAACTAAGAAATTG+TGG 0.543960 1_2:+10263602 None:intergenic
TTCGAGGGCCTTGGCCGTGG+CGG 0.544881 1_2:-10263454 Msa0055310:three_prime_UTR
ATAACTTGCCGCCACGGCCA+AGG 0.549106 1_2:+10263446 None:intergenic
GGGATTGAAGCTGTTGGAAA+GGG 0.549164 1_2:-10264778 Msa0055310:CDS
TCATCCCTGGTCAATCTGCA+TGG 0.552095 1_2:-10264295 Msa0055310:CDS
GTTGGGGATCAAGGAATCGC+TGG 0.553667 1_2:-10265030 Msa0055310:CDS
TAAATCTTGCAGTTCAGGAA+AGG 0.554597 1_2:+10263945 None:intergenic
CTGTGAAGAGTTTGGAGGTG+AGG 0.561043 1_2:-10265493 Msa0055310:CDS
GATAGTAGACATCAACTTGA+GGG 0.562773 1_2:+10265775 None:intergenic
CGACAAAGTAGTTTCATCCC+TGG 0.562846 1_2:-10264308 Msa0055310:CDS
TGTGAAGAGTTTGGAGGTGA+GGG 0.567927 1_2:-10265492 Msa0055310:CDS
AATTCAACTTGTTGAAGCTG+AGG 0.567931 1_2:+10264433 None:intergenic
ATACACCATACAAACACAAA+GGG 0.569316 1_2:+10263285 None:intergenic
TTAGGGAAGCTTTCAATCCG+TGG 0.570647 1_2:-10265384 Msa0055310:CDS
GCTGCACTTTGGTTACGGAC+AGG 0.573743 1_2:-10264087 Msa0055310:CDS
ATATCTATCAAGGACTGTGC+CGG 0.574521 1_2:-10265054 Msa0055310:CDS
ACAACTTTCCGAGTACAGAA+AGG 0.575435 1_2:+10264458 None:intergenic
AAAGAGAAAGACTTTAGAGA+AGG 0.577504 1_2:+10265303 None:intergenic
CAACTTTCCGAGTACAGAAA+GGG 0.577567 1_2:+10264459 None:intergenic
ATTCAACTTGTTGAAGCTGA+GGG 0.582352 1_2:+10264434 None:intergenic
TTAAGGGAGTCACAGATGCT+GGG 0.582917 1_2:-10264402 Msa0055310:CDS
AGAAGTGTCCGACTCTGACC+GGG 0.584679 1_2:-10265155 Msa0055310:CDS
AAATTGCAGGGCATTTGCAA+AGG 0.585154 1_2:+10265205 None:intergenic
GAATTTGTGTTATGAAATCG+TGG 0.585664 1_2:+10266609 None:intergenic
ACATGTATAACTTGCCGCCA+CGG 0.587512 1_2:+10263440 None:intergenic
CTTGTTAAAGTTAATCTCAG+TGG 0.588339 1_2:-10264346 Msa0055310:CDS
CGGATTGATTTCATTCACCA+AGG 0.590158 1_2:-10264701 Msa0055310:CDS
AATGAAGGTCTACAAGCCAT+TGG 0.590793 1_2:-10265102 Msa0055310:CDS
GGTTAAATGACTGCATACTC+CGG 0.591159 1_2:+10263801 None:intergenic
TTTATTCTCGTCATTTGAGG+AGG 0.593111 1_2:+10265527 None:intergenic
TGATCATCATCCAGTGACTC+GGG 0.594984 1_2:-10263833 Msa0055310:three_prime_UTR
AAGCCTTGTCGGAAATTGCA+GGG 0.597068 1_2:+10265193 None:intergenic
ATTTGGGCAGAACTTTCCAA+TGG 0.599132 1_2:+10265086 None:intergenic
AAAGGCAGCAACCAAATACA+TGG 0.601427 1_2:+10263734 None:intergenic
TATTTAGTCCCAAAAGGGTG+TGG 0.603959 1_2:+10264038 None:intergenic
GAGGAAATTAAGGACAAGAT+CGG 0.606521 1_2:+10264903 None:intergenic
AATGATAACCCGGTCAGAGT+CGG 0.607227 1_2:+10265147 None:intergenic
TGTGCATTTCTCTCAGACAA+CGG 0.609269 1_2:-10264721 Msa0055310:CDS
CTGCAAGATTTAATCTCACA+CGG 0.610841 1_2:-10263934 Msa0055310:three_prime_UTR
CATGCAGAAGTCTAGTTACA+CGG 0.612777 1_2:-10263890 Msa0055310:three_prime_UTR
GGAAGAAATTTGCTTCCTTG+GGG 0.618210 1_2:+10265808 None:intergenic
TGGGATTGAAGCTGTTGGAA+AGG 0.620246 1_2:-10264779 Msa0055310:CDS
CTCACAATTGCATCCTGCAG+AGG 0.621245 1_2:-10264814 Msa0055310:CDS
AACAGCTTCAATCCCAACAT+CGG 0.622290 1_2:+10264786 None:intergenic
TCCATTGCTTGAGAGCTCTG+AGG 0.622593 1_2:-10264374 Msa0055310:CDS
ACCCAAATTGGGTAATTCTG+TGG 0.625237 1_2:+10264641 None:intergenic
ATCTTTAGAAGGTTGCCTGT+TGG 0.625556 1_2:-10265642 Msa0055310:CDS
GGATAGTAGACATCAACTTG+AGG 0.626268 1_2:+10265774 None:intergenic
ACACGTGATCTCTTCTGAGG+TGG 0.627046 1_2:+10265753 None:intergenic
ATGCCCTGCAATTTCCGACA+AGG 0.628954 1_2:-10265196 Msa0055310:CDS
GGAATCGGAGATCGCACACA+AGG 0.629259 1_2:+10264168 None:intergenic
GGGTAGCGTTGCCAAATCCA+GGG 0.632564 1_2:+10264479 None:intergenic
CTGACACGTGATCTCTTCTG+AGG 0.633789 1_2:+10265750 None:intergenic
GATGTTGGGATTGAAGCTGT+TGG 0.634700 1_2:-10264784 Msa0055310:CDS
CTCTCTCACTAACATTTGGG+AGG 0.636568 1_2:+10264884 None:intergenic
AGTGACTGTGAAGAGTTTGG+AGG 0.637667 1_2:-10265498 Msa0055310:CDS
AAAGCCGAAGACTTGAGACA+TGG 0.640057 1_2:+10266462 None:intergenic
AATACACCATACAAACACAA+AGG 0.641843 1_2:+10263284 None:intergenic
AAGCCGAAGACTTGAGACAT+GGG 0.651629 1_2:+10266463 None:intergenic
GATTCCTTGATCCCCAACAC+CGG 0.655421 1_2:+10265035 None:intergenic
TCTCTGAGAACACAACTACC+GGG 0.663577 1_2:-10263697 Msa0055310:three_prime_UTR
ACCTTCTAAAGATCTCAAAG+AGG 0.665153 1_2:+10265652 None:intergenic
CGTGGAAGCAACTCAGAACG+CGG 0.669342 1_2:-10265366 Msa0055310:CDS
ACAAGACTCTAATGATAACC+CGG 0.673228 1_2:+10265137 None:intergenic
GTTGGAACTGCATCACGAGG+AGG 0.679979 1_2:-10265408 Msa0055310:CDS
AGATTCCTAACTCCAGAACC+CGG 0.680416 1_2:+10263679 None:intergenic
CCAACCATGCAGATTGACCA+GGG 0.686419 1_2:+10264291 None:intergenic
GGTTTGTGTATAACCCACCA+TGG 0.686541 1_2:+10265829 None:intergenic
AATAGCAGCAAGTCTAACAT+CGG 0.688914 1_2:+10265434 None:intergenic
GCAGTTGGAACTGCATCACG+AGG 0.700255 1_2:-10265411 Msa0055310:CDS
AAAAGAAAGAGAAAATTTGG+GGG 0.715461 1_2:+10266663 None:intergenic
TGGGTTATACACAAACCCCA+AGG 0.726645 1_2:-10265823 Msa0055310:CDS
CAAAACACCTATTGACACCG+TGG 0.742161 1_2:+10263555 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAGAGAAAATTT+GGG + chr1_2:10263324-10263343 None:intergenic 15.0%
!! AAAAAAAGAAAGAGAAAATT+TGG + chr1_2:10263325-10263344 None:intergenic 15.0%
!!! TATTTGATTCATAGATTTTT+AGG - chr1_2:10263574-10263593 Msa0055310:three_prime_UTR 15.0%
!! AAAAAGAAAGAGAAAATTTG+GGG + chr1_2:10263323-10263342 None:intergenic 20.0%
!!! AATTCTCTTAATTTGTTATG+TGG - chr1_2:10263747-10263766 Msa0055310:three_prime_UTR 20.0%
!! AGATCTATAAGATTAGTATT+TGG - chr1_2:10263829-10263848 Msa0055310:three_prime_UTR 20.0%
!! GATCTATAAGATTAGTATTT+GGG - chr1_2:10263830-10263849 Msa0055310:three_prime_UTR 20.0%
!!! TTTTACTTTTCTGATATCAT+AGG - chr1_2:10263962-10263981 Msa0055310:CDS 20.0%
!! TAGATATAACCTTAAGATTT+GGG + chr1_2:10264915-10264934 None:intergenic 20.0%
!! ATAGATATAACCTTAAGATT+TGG + chr1_2:10264916-10264935 None:intergenic 20.0%
!!! CAAATTTTATTTCATCATTG+TGG + chr1_2:10266725-10266744 None:intergenic 20.0%
!!! AATATCAAAACAAATGCTTT+TGG + chr1_2:10266758-10266777 None:intergenic 20.0%
! TTAATGAACCATTCATTGTA+TGG - chr1_2:10263205-10263224 Msa0055310:three_prime_UTR 25.0%
! TAATGAACCATTCATTGTAT+GGG - chr1_2:10263206-10263225 Msa0055310:three_prime_UTR 25.0%
!! TTTTATTGTAAGAGACAAGT+GGG + chr1_2:10263241-10263260 None:intergenic 25.0%
!! TTTTTATTGTAAGAGACAAG+TGG + chr1_2:10263242-10263261 None:intergenic 25.0%
! AATGAAAAATGAAGGGAAAA+GGG + chr1_2:10263269-10263288 None:intergenic 25.0%
! GAAGATGAATGAAAAATGAA+GGG + chr1_2:10263276-10263295 None:intergenic 25.0%
! AGAAGATGAATGAAAAATGA+AGG + chr1_2:10263277-10263296 None:intergenic 25.0%
! AAAAGAAAGAGAAAATTTGG+GGG + chr1_2:10263322-10263341 None:intergenic 25.0%
!!! TTTTTTGCCCTATTTCAATT+AGG - chr1_2:10263339-10263358 Msa0055310:three_prime_UTR 25.0%
!! TTTTTGCCCTATTTCAATTA+GGG - chr1_2:10263340-10263359 Msa0055310:three_prime_UTR 25.0%
!!! ATTTGATTTGTGAGTATTGA+AGG + chr1_2:10263435-10263454 None:intergenic 25.0%
!!! ATTCATAGATTTTTAGGTTG+TGG - chr1_2:10263580-10263599 Msa0055310:three_prime_UTR 25.0%
!!! TTCATAGATTTTTAGGTTGT+GGG - chr1_2:10263581-10263600 Msa0055310:three_prime_UTR 25.0%
!!! ATGATGATTTTGATGTTCAT+AGG - chr1_2:10263661-10263680 Msa0055310:three_prime_UTR 25.0%
!!! TCTTAATTTGTTATGTGGTA+TGG - chr1_2:10263752-10263771 Msa0055310:three_prime_UTR 25.0%
!!! ACATAGTTTTGATTGATTAG+CGG - chr1_2:10263865-10263884 Msa0055310:three_prime_UTR 25.0%
! TCTTAAGGTTATATCTATCA+AGG - chr1_2:10264918-10264937 Msa0055310:CDS 25.0%
!!! AAAATTGAAGGCTTTTTCTA+TGG - chr1_2:10265392-10265411 Msa0055310:CDS 25.0%
!!! TGATATTTTTACAACCTTCA+AGG + chr1_2:10265734-10265753 None:intergenic 25.0%
!!! TTTTTTGGTCCATTAACTTT+GGG - chr1_2:10266123-10266142 Msa0055310:intron 25.0%
! AAGGAATCTGCAAAAAAATA+TGG + chr1_2:10266205-10266224 None:intergenic 25.0%
! AAAAACAGAATTCCAATCAA+AGG + chr1_2:10266224-10266243 None:intergenic 25.0%
!! TTTGATTGGAATTCTGTTTT+TGG - chr1_2:10266223-10266242 Msa0055310:intron 25.0%
!!! TTAGGAATCTTTGTTACTTT+GGG - chr1_2:10266316-10266335 Msa0055310:intron 25.0%
!!! AAAGGTTGTTTTTTTATACC+AGG - chr1_2:10266592-10266611 Msa0055310:five_prime_UTR 25.0%
! TGAAGCCTTAAAAAAAACTA+GGG + chr1_2:10266618-10266637 None:intergenic 25.0%
! ATGAAGCCTTAAAAAAAACT+AGG + chr1_2:10266619-10266638 None:intergenic 25.0%
GAATGAAAAATGAAGGGAAA+AGG + chr1_2:10263270-10263289 None:intergenic 30.0%
TGGAAACCCTAATTGAAATA+GGG + chr1_2:10263349-10263368 None:intergenic 30.0%
TTGGAAACCCTAATTGAAAT+AGG + chr1_2:10263350-10263369 None:intergenic 30.0%
TGTTATGAAATCGTGGAAAT+TGG + chr1_2:10263369-10263388 None:intergenic 30.0%
GAATTTGTGTTATGAAATCG+TGG + chr1_2:10263376-10263395 None:intergenic 30.0%
TTAAGTGGTGAAATTTCAAC+TGG - chr1_2:10263787-10263806 Msa0055310:three_prime_UTR 30.0%
TAAGTGGTGAAATTTCAACT+GGG - chr1_2:10263788-10263807 Msa0055310:three_prime_UTR 30.0%
CTATAAGATTAGTATTTGGG+AGG - chr1_2:10263833-10263852 Msa0055310:three_prime_UTR 30.0%
!!! TTGAGAAGTTTGTTTTGCAT+AGG - chr1_2:10263993-10264012 Msa0055310:CDS 30.0%
!!! AGCAGTTTTGTTGAATTTGA+TGG - chr1_2:10264025-10264044 Msa0055310:CDS 30.0%
AACGATTGTGCAAAATAATC+AGG + chr1_2:10264109-10264128 None:intergenic 30.0%
! CATTTTATTCTCGTCATTTG+AGG + chr1_2:10264461-10264480 None:intergenic 30.0%
CTCAAATGACGAGAATAAAA+TGG - chr1_2:10264459-10264478 Msa0055310:CDS 30.0%
! AAAGAGAAAGACTTTAGAGA+AGG + chr1_2:10264682-10264701 None:intergenic 30.0%
!! CTCTAAAGTCTTTCTCTTTA+TGG - chr1_2:10264683-10264702 Msa0055310:CDS 30.0%
TTATGGAATGTTTCTTCTGT+TGG - chr1_2:10264700-10264719 Msa0055310:CDS 30.0%
TAACATTTGGGAGGAAATTA+AGG + chr1_2:10265092-10265111 None:intergenic 30.0%
! AGATGTACGCTTTTCAAATT+AGG + chr1_2:10265234-10265253 None:intergenic 30.0%
!! ATTACCCAATTTGGGTTTTT+CGG - chr1_2:10265348-10265367 Msa0055310:CDS 30.0%
! ATTTTGCACCACAGTTAAAA+AGG + chr1_2:10265377-10265396 None:intergenic 30.0%
! CTTCAACAAGTTGAATTAAC+TGG - chr1_2:10265555-10265574 Msa0055310:CDS 30.0%
AGTTGAATTAACTGGACTTA+AGG - chr1_2:10265563-10265582 Msa0055310:CDS 30.0%
GTTGAATTAACTGGACTTAA+GGG - chr1_2:10265564-10265583 Msa0055310:CDS 30.0%
CTTGTTAAAGTTAATCTCAG+TGG - chr1_2:10265636-10265655 Msa0055310:CDS 30.0%
!!! GTTTTTTGGTCCATTAACTT+TGG - chr1_2:10266122-10266141 Msa0055310:intron 30.0%
! TTTTTGCAGATTCCTTTGAT+TGG - chr1_2:10266209-10266228 Msa0055310:intron 30.0%
! GTTAGGAATCTTTGTTACTT+TGG - chr1_2:10266315-10266334 Msa0055310:intron 30.0%
ACTGTAAAAACATAGACAGA+GGG + chr1_2:10266399-10266418 None:intergenic 30.0%
AACTGTAAAAACATAGACAG+AGG + chr1_2:10266400-10266419 None:intergenic 30.0%
! TTTTACAGTTATCTGTACCA+CGG - chr1_2:10266410-10266429 Msa0055310:intron 30.0%
!!! AATAGGTGTTTTGACTCAAA+CGG - chr1_2:10266437-10266456 Msa0055310:intron 30.0%
! CATGACAATCTTTTTCCATT+GGG - chr1_2:10266569-10266588 Msa0055310:five_prime_UTR 30.0%
AAAAAAACAACCTTTCCCAA+TGG + chr1_2:10266587-10266606 None:intergenic 30.0%
ATACACCATACAAACACAAA+GGG + chr1_2:10266700-10266719 None:intergenic 30.0%
AATACACCATACAAACACAA+AGG + chr1_2:10266701-10266720 None:intergenic 30.0%
AAAAATGAAGGGAAAAGGGA+AGG + chr1_2:10263265-10263284 None:intergenic 35.0%
AGATTGAGAGAGAGAAAAAG+AGG + chr1_2:10263398-10263417 None:intergenic 35.0%
AGCAAAGAAGAAGAAGAAGA+CGG + chr1_2:10263461-10263480 None:intergenic 35.0%
!!! CTTTTTTTGCACTCTTTGGA+GGG - chr1_2:10263482-10263501 Msa0055310:three_prime_UTR 35.0%
CAACCAAAAATAGTAGCATG+CGG - chr1_2:10263620-10263639 Msa0055310:three_prime_UTR 35.0%
ATGTGGTATGGATAATCATG+TGG - chr1_2:10263764-10263783 Msa0055310:three_prime_UTR 35.0%
TGGATAATCATGTGGTTAAG+TGG - chr1_2:10263772-10263791 Msa0055310:three_prime_UTR 35.0%
! AGGAAGAAATTTGCTTCCTT+GGG + chr1_2:10264178-10264197 None:intergenic 35.0%
GATAGTAGACATCAACTTGA+GGG + chr1_2:10264210-10264229 None:intergenic 35.0%
!! AGTGTTCCATTTGTTTTCGA+TGG - chr1_2:10264253-10264272 Msa0055310:CDS 35.0%
CATTCTCCATCGAAAACAAA+TGG + chr1_2:10264262-10264281 None:intergenic 35.0%
!! CATTTGTTTTCGATGGAGAA+TGG - chr1_2:10264260-10264279 Msa0055310:CDS 35.0%
! ACCTTCTAAAGATCTCAAAG+AGG + chr1_2:10264333-10264352 None:intergenic 35.0%
TTTATTCTCGTCATTTGAGG+AGG + chr1_2:10264458-10264477 None:intergenic 35.0%
AATAGCAGCAAGTCTAACAT+CGG + chr1_2:10264551-10264570 None:intergenic 35.0%
ATCCATTAGCGATCTCAATA+AGG + chr1_2:10264735-10264754 None:intergenic 35.0%
ACAAGACTCTAATGATAACC+CGG + chr1_2:10264848-10264867 None:intergenic 35.0%
AAAGTTCTGCCCAAATCTTA+AGG - chr1_2:10264903-10264922 Msa0055310:CDS 35.0%
GAGGAAATTAAGGACAAGAT+CGG + chr1_2:10265082-10265101 None:intergenic 35.0%
ATCACTTGAAAGCCTACAAT+TGG - chr1_2:10265311-10265330 Msa0055310:CDS 35.0%
TAACTGTGGTGCAAAATTGA+AGG - chr1_2:10265380-10265399 Msa0055310:CDS 35.0%
! TTTTCTATGGTAAGCTGCTT+TGG - chr1_2:10265405-10265424 Msa0055310:CDS 35.0%
! TTTCTATGGTAAGCTGCTTT+GGG - chr1_2:10265406-10265425 Msa0055310:CDS 35.0%
AGTGATTCACAATGAGATAC+AGG + chr1_2:10265459-10265478 None:intergenic 35.0%
!! ATTCAACTTGTTGAAGCTGA+GGG + chr1_2:10265551-10265570 None:intergenic 35.0%
!! AATTCAACTTGTTGAAGCTG+AGG + chr1_2:10265552-10265571 None:intergenic 35.0%
CATCAAGATCACAAAGCAAT+TGG + chr1_2:10265791-10265810 None:intergenic 35.0%
!! TTACCCGCTTTGAGAAAATT+GGG - chr1_2:10265921-10265940 Msa0055310:intron 35.0%
CTGGATATTTAGTCCCAAAA+GGG + chr1_2:10265952-10265971 None:intergenic 35.0%
! AGATGCTTGTTGAACATCTT+TGG - chr1_2:10266003-10266022 Msa0055310:intron 35.0%
TAAATCTTGCAGTTCAGGAA+AGG + chr1_2:10266040-10266059 None:intergenic 35.0%
GAGATTAAATCTTGCAGTTC+AGG + chr1_2:10266045-10266064 None:intergenic 35.0%
CTGCAAGATTTAATCTCACA+CGG - chr1_2:10266048-10266067 Msa0055310:intron 35.0%
TTAATCTCACACGGCAATTT+AGG - chr1_2:10266057-10266076 Msa0055310:intron 35.0%
!!! TACACGGCATAGTAGTTTTT+TGG - chr1_2:10266108-10266127 Msa0055310:intron 35.0%
TGATCAAGACCCAAAGTTAA+TGG + chr1_2:10266135-10266154 None:intergenic 35.0%
!!! TGTTTTTGGCACCATGTATT+TGG - chr1_2:10266237-10266256 Msa0055310:intron 35.0%
! TTTGGTTGCTGCCTTTTAAA+TGG - chr1_2:10266255-10266274 Msa0055310:intron 35.0%
GAGATATGCAGCCATTTAAA+AGG + chr1_2:10266269-10266288 None:intergenic 35.0%
!! GAATCTTTGTTACTTTGGGT+TGG - chr1_2:10266320-10266339 Msa0055310:intron 35.0%
!!! TTTTTAGCTCGGCTTTGTAT+CGG - chr1_2:10266352-10266371 Msa0055310:intron 35.0%
!!! TTATGAAGCCTTGTTTTCGA+GGG - chr1_2:10266513-10266532 Msa0055310:five_prime_UTR 35.0%
CCAATGGAAAAAGATTGTCA+TGG + chr1_2:10266571-10266590 None:intergenic 35.0%
! CCATGACAATCTTTTTCCAT+TGG - chr1_2:10266568-10266587 Msa0055310:five_prime_UTR 35.0%
! CAATCTTTTTCCATTGGGAA+AGG - chr1_2:10266574-10266593 Msa0055310:five_prime_UTR 35.0%
ACGGATTCCCATACAATGAA+TGG + chr1_2:10263216-10263235 None:intergenic 40.0%
TGTAAGAGACAAGTGGGAAA+CGG + chr1_2:10263235-10263254 None:intergenic 40.0%
!!! GCTGCTTTTTTTGCACTCTT+TGG - chr1_2:10263478-10263497 Msa0055310:three_prime_UTR 40.0%
!!! GCTTTTTTTGCACTCTTTGG+AGG - chr1_2:10263481-10263500 Msa0055310:three_prime_UTR 40.0%
! GAACCGCATGCTACTATTTT+TGG + chr1_2:10263626-10263645 None:intergenic 40.0%
GCACAATCGTTTATGTTCTC+AGG - chr1_2:10264118-10264137 Msa0055310:CDS 40.0%
! GGAAGAAATTTGCTTCCTTG+GGG + chr1_2:10264177-10264196 None:intergenic 40.0%
! CAGGAAGAAATTTGCTTCCT+TGG + chr1_2:10264179-10264198 None:intergenic 40.0%
GCAAATTTCTTCCTGTCTCT+TGG - chr1_2:10264184-10264203 Msa0055310:CDS 40.0%
GGATAGTAGACATCAACTTG+AGG + chr1_2:10264211-10264230 None:intergenic 40.0%
!! GCCTCTTTGAGATCTTTAGA+AGG - chr1_2:10264329-10264348 Msa0055310:CDS 40.0%
! ATCTTTAGAAGGTTGCCTGT+TGG - chr1_2:10264340-10264359 Msa0055310:CDS 40.0%
GATAGTGACTGTGAAGAGTT+TGG - chr1_2:10264481-10264500 Msa0055310:CDS 40.0%
!! GTTTCTTCTGTTGGTGATGA+AGG - chr1_2:10264709-10264728 Msa0055310:CDS 40.0%
! AAATTGCAGGGCATTTGCAA+AGG + chr1_2:10264780-10264799 None:intergenic 40.0%
! AACTGCGATTAAAGCCTTGT+CGG + chr1_2:10264803-10264822 None:intergenic 40.0%
AATGAAGGTCTACAAGCCAT+TGG - chr1_2:10264880-10264899 Msa0055310:CDS 40.0%
ATTTGGGCAGAACTTTCCAA+TGG + chr1_2:10264899-10264918 None:intergenic 40.0%
ATATCTATCAAGGACTGTGC+CGG - chr1_2:10264928-10264947 Msa0055310:CDS 40.0%
CCAAAGAAGTCGAAGAAAAC+AGG + chr1_2:10264978-10264997 None:intergenic 40.0%
! CCTGTTTTCTTCGACTTCTT+TGG - chr1_2:10264975-10264994 Msa0055310:CDS 40.0%
!! GACTTCTTTGGTTCTGACAA+AGG - chr1_2:10264987-10265006 Msa0055310:CDS 40.0%
GATCTCTCTCTAGCTGTTAT+TGG - chr1_2:10265036-10265055 Msa0055310:CDS 40.0%
CTAGCTGTTATTGGACACTA+TGG - chr1_2:10265045-10265064 Msa0055310:CDS 40.0%
AGCCTCTCTCACTAACATTT+GGG + chr1_2:10265104-10265123 None:intergenic 40.0%
AAGCCTCTCTCACTAACATT+TGG + chr1_2:10265105-10265124 None:intergenic 40.0%
TGGGTTATGGGAAATGCTAA+TGG - chr1_2:10265126-10265145 Msa0055310:CDS 40.0%
AACAGCTTCAATCCCAACAT+CGG + chr1_2:10265199-10265218 None:intergenic 40.0%
TGTGCATTTCTCTCAGACAA+CGG - chr1_2:10265261-10265280 Msa0055310:CDS 40.0%
! CGGATTGATTTCATTCACCA+AGG - chr1_2:10265281-10265300 Msa0055310:CDS 40.0%
TTCAAGTGATATAGCAGCCT+TGG + chr1_2:10265301-10265320 None:intergenic 40.0%
TGCCACAGAATTACCCAATT+TGG - chr1_2:10265339-10265358 Msa0055310:CDS 40.0%
GCCACAGAATTACCCAATTT+GGG - chr1_2:10265340-10265359 Msa0055310:CDS 40.0%
ACCCAAATTGGGTAATTCTG+TGG + chr1_2:10265344-10265363 None:intergenic 40.0%
CAACTTTCCGAGTACAGAAA+GGG + chr1_2:10265526-10265545 None:intergenic 40.0%
ACAACTTTCCGAGTACAGAA+AGG + chr1_2:10265527-10265546 None:intergenic 40.0%
CAGGGATGAAACTACTTTGT+CGG + chr1_2:10265676-10265695 None:intergenic 40.0%
CTCGAAATTCTGAACCTTGA+AGG - chr1_2:10265717-10265736 Msa0055310:CDS 40.0%
CTACAGATTCTTTCTCTGTC+AGG - chr1_2:10265873-10265892 Msa0055310:intron 40.0%
!! CTTACCCGCTTTGAGAAAAT+TGG - chr1_2:10265920-10265939 Msa0055310:intron 40.0%
TATTTAGTCCCAAAAGGGTG+TGG + chr1_2:10265947-10265966 None:intergenic 40.0%
GCTGGATATTTAGTCCCAAA+AGG + chr1_2:10265953-10265972 None:intergenic 40.0%
! TGCTGATTGAATTGCAATGC+TGG + chr1_2:10265971-10265990 None:intergenic 40.0%
! TGCTTGTTGAACATCTTTGG+AGG - chr1_2:10266006-10266025 Msa0055310:intron 40.0%
CATGCAGAAGTCTAGTTACA+CGG - chr1_2:10266092-10266111 Msa0055310:intron 40.0%
TTGATCATCATCCAGTGACT+CGG - chr1_2:10266148-10266167 Msa0055310:intron 40.0%
GGTTAAATGACTGCATACTC+CGG + chr1_2:10266184-10266203 None:intergenic 40.0%
AAAGGCAGCAACCAAATACA+TGG + chr1_2:10266251-10266270 None:intergenic 40.0%
! ATCTCTGAGAACACAACTAC+CGG - chr1_2:10266284-10266303 Msa0055310:intron 40.0%
AAAGCCGAGCTAAAAACATC+AGG + chr1_2:10266348-10266367 None:intergenic 40.0%
CAGAGGGAACTAAGAAATTG+TGG + chr1_2:10266383-10266402 None:intergenic 40.0%
! TTTGACTCAAACGGAGGTAT+CGG - chr1_2:10266446-10266465 Msa0055310:intron 40.0%
TCGGTATTAGTGCTCTTGTT+AGG - chr1_2:10266465-10266484 Msa0055310:exon 40.0%
CGGTATTAGTGCTCTTGTTA+GGG - chr1_2:10266466-10266485 Msa0055310:exon 40.0%
!!! GTTATGAAGCCTTGTTTTCG+AGG - chr1_2:10266512-10266531 Msa0055310:five_prime_UTR 40.0%
CCTTAAAAAAAACTAGGGCC+TGG + chr1_2:10266613-10266632 None:intergenic 40.0%
!!! CCAGGCCCTAGTTTTTTTTA+AGG - chr1_2:10266610-10266629 Msa0055310:five_prime_UTR 40.0%
ATCTGCCCTTTGTGTTTGTA+TGG - chr1_2:10266692-10266711 Msa0055310:five_prime_UTR 40.0%
AAGCCGAAGACTTGAGACAT+GGG + chr1_2:10263522-10263541 None:intergenic 45.0%
AAAGCCGAAGACTTGAGACA+TGG + chr1_2:10263523-10263542 None:intergenic 45.0%
! TCTCAAGTCTTCGGCTTTTC+TGG - chr1_2:10263525-10263544 Msa0055310:three_prime_UTR 45.0%
! TCAGGTGATAGCTTTTGCCA+TGG - chr1_2:10264136-10264155 Msa0055310:CDS 45.0%
! GTGATAGCTTTTGCCATGGT+GGG - chr1_2:10264140-10264159 Msa0055310:CDS 45.0%
GGTTTGTGTATAACCCACCA+TGG + chr1_2:10264156-10264175 None:intergenic 45.0%
TGGGTTATACACAAACCCCA+AGG - chr1_2:10264159-10264178 Msa0055310:CDS 45.0%
!! ATCTCAAAGAGGCACTCATC+TGG + chr1_2:10264322-10264341 None:intergenic 45.0%
AGTGACTGTGAAGAGTTTGG+AGG - chr1_2:10264484-10264503 Msa0055310:CDS 45.0%
TGTGAAGAGTTTGGAGGTGA+GGG - chr1_2:10264490-10264509 Msa0055310:CDS 45.0%
CTTCTTTCCTTCCAAGCTTC+GGG + chr1_2:10264524-10264543 None:intergenic 45.0%
CCTTCTTTCCTTCCAAGCTT+CGG + chr1_2:10264525-10264544 None:intergenic 45.0%
!! AGACTTGCTGCTATTGCAGT+TGG - chr1_2:10264556-10264575 Msa0055310:CDS 45.0%
TTAGGGAAGCTTTCAATCCG+TGG - chr1_2:10264598-10264617 Msa0055310:CDS 45.0%
!! GGCCTTATTGAGATCGCTAA+TGG - chr1_2:10264730-10264749 Msa0055310:CDS 45.0%
! AAGCCTTGTCGGAAATTGCA+GGG + chr1_2:10264792-10264811 None:intergenic 45.0%
! AAAGCCTTGTCGGAAATTGC+AGG + chr1_2:10264793-10264812 None:intergenic 45.0%
AATGATAACCCGGTCAGAGT+CGG + chr1_2:10264838-10264857 None:intergenic 45.0%
TGTCCTAGCATTCGCAATGA+AGG - chr1_2:10264865-10264884 Msa0055310:CDS 45.0%
AGACCTTCATTGCGAATGCT+AGG + chr1_2:10264871-10264890 None:intergenic 45.0%
AAAGGTGAAGCTTCAAGCAC+TGG - chr1_2:10265005-10265024 Msa0055310:CDS 45.0%
CTCTCTCACTAACATTTGGG+AGG + chr1_2:10265101-10265120 None:intergenic 45.0%
CTCCCAAATGTTAGTGAGAG+AGG - chr1_2:10265099-10265118 Msa0055310:CDS 45.0%
ATGTTAGTGAGAGAGGCTTC+TGG - chr1_2:10265106-10265125 Msa0055310:CDS 45.0%
TGTTAGTGAGAGAGGCTTCT+GGG - chr1_2:10265107-10265126 Msa0055310:CDS 45.0%
GATGTTGGGATTGAAGCTGT+TGG - chr1_2:10265198-10265217 Msa0055310:CDS 45.0%
TGGGATTGAAGCTGTTGGAA+AGG - chr1_2:10265203-10265222 Msa0055310:CDS 45.0%
GGGATTGAAGCTGTTGGAAA+GGG - chr1_2:10265204-10265223 Msa0055310:CDS 45.0%
TGTGGCACTCTTCCAATTGT+AGG + chr1_2:10265326-10265345 None:intergenic 45.0%
GACGCCGAAAAACCCAAATT+GGG + chr1_2:10265355-10265374 None:intergenic 45.0%
!! TTCGGCGTCCTTTTTAACTG+TGG - chr1_2:10265366-10265385 Msa0055310:CDS 45.0%
TTATCGATCTGTAACTGCCC+TGG - chr1_2:10265486-10265505 Msa0055310:CDS 45.0%
ATCTGTAACTGCCCTGGATT+TGG - chr1_2:10265492-10265511 Msa0055310:CDS 45.0%
AACGCTACCCTTTCTGTACT+CGG - chr1_2:10265516-10265535 Msa0055310:CDS 45.0%
TTAAGGGAGTCACAGATGCT+GGG - chr1_2:10265580-10265599 Msa0055310:CDS 45.0%
CGACAAAGTAGTTTCATCCC+TGG - chr1_2:10265674-10265693 Msa0055310:CDS 45.0%
! TATCTGTTTTGCGTGTGCCA+GGG + chr1_2:10265850-10265869 None:intergenic 45.0%
! TTATCTGTTTTGCGTGTGCC+AGG + chr1_2:10265851-10265870 None:intergenic 45.0%
! TGGCCCAATTTTCTCAAAGC+GGG + chr1_2:10265927-10265946 None:intergenic 45.0%
! GTGGCCCAATTTTCTCAAAG+CGG + chr1_2:10265928-10265947 None:intergenic 45.0%
! AAAATTGGGCCACACCCTTT+TGG - chr1_2:10265935-10265954 Msa0055310:intron 45.0%
! AAATTGGGCCACACCCTTTT+GGG - chr1_2:10265936-10265955 Msa0055310:intron 45.0%
TGATCATCATCCAGTGACTC+GGG - chr1_2:10266149-10266168 Msa0055310:intron 45.0%
GACTGCATACTCCGGAAAAA+GGG + chr1_2:10266176-10266195 None:intergenic 45.0%
TGACTGCATACTCCGGAAAA+AGG + chr1_2:10266177-10266196 None:intergenic 45.0%
! TCTCTGAGAACACAACTACC+GGG - chr1_2:10266285-10266304 Msa0055310:intron 45.0%
AGATTCCTAACTCCAGAACC+CGG + chr1_2:10266306-10266325 None:intergenic 45.0%
!!! GGCACCTGATGTTTTTAGCT+CGG - chr1_2:10266341-10266360 Msa0055310:intron 45.0%
! ATCTGTACCACGGTGTCAAT+AGG - chr1_2:10266420-10266439 Msa0055310:intron 45.0%
CAAAACACCTATTGACACCG+TGG + chr1_2:10266430-10266449 None:intergenic 45.0%
!!! AGGTGTTTTGACTCAAACGG+AGG - chr1_2:10266440-10266459 Msa0055310:intron 45.0%
TTAGGGTTGTTGCAGTTGTC+TGG - chr1_2:10266483-10266502 Msa0055310:five_prime_UTR 45.0%
! ACATGTATAACTTGCCGCCA+CGG + chr1_2:10266545-10266564 None:intergenic 45.0%
!!! TATTTTTTATGAAATAATTA+TGG - chr1_2:10263714-10263733 Msa0055310:three_prime_UTR 5.0%
!!! ATTTTTTATGAAATAATTAT+GGG - chr1_2:10263715-10263734 Msa0055310:three_prime_UTR 5.0%
! CTTTGGAGGGTTGTTTCAGC+TGG - chr1_2:10263495-10263514 Msa0055310:three_prime_UTR 50.0%
GGACCCATGTCTCAAGTCTT+CGG - chr1_2:10263516-10263535 Msa0055310:three_prime_UTR 50.0%
! GGTGATAGCTTTTGCCATGG+TGG - chr1_2:10264139-10264158 Msa0055310:CDS 50.0%
! ACACGTGATCTCTTCTGAGG+TGG + chr1_2:10264232-10264251 None:intergenic 50.0%
CTGACACGTGATCTCTTCTG+AGG + chr1_2:10264235-10264254 None:intergenic 50.0%
! GGTTGCCTGTTGGTGAAGAA+AGG - chr1_2:10264350-10264369 Msa0055310:CDS 50.0%
GCACTCCTTTCTTCACCAAC+AGG + chr1_2:10264358-10264377 None:intergenic 50.0%
CTGCTTGTGTTTCCAAACGC+TGG - chr1_2:10264380-10264399 Msa0055310:CDS 50.0%
! CAGAAGCATAAGCCAGCGTT+TGG + chr1_2:10264395-10264414 None:intergenic 50.0%
CTGTGAAGAGTTTGGAGGTG+AGG - chr1_2:10264489-10264508 Msa0055310:CDS 50.0%
TACCTTTCCCGAAGCTTGGA+AGG - chr1_2:10264514-10264533 Msa0055310:CDS 50.0%
TTCCTTCCAAGCTTCGGGAA+AGG + chr1_2:10264519-10264538 None:intergenic 50.0%
CCGAAGCTTGGAAGGAAAGA+AGG - chr1_2:10264522-10264541 Msa0055310:CDS 50.0%
ACTGCATCACGAGGAGGATT+AGG - chr1_2:10264580-10264599 Msa0055310:CDS 50.0%
CTGCATCACGAGGAGGATTA+GGG - chr1_2:10264581-10264600 Msa0055310:CDS 50.0%
GGTCTCAAAGCAGTTGCTAG+TGG - chr1_2:10264652-10264671 Msa0055310:CDS 50.0%
ATGCCCTGCAATTTCCGACA+AGG - chr1_2:10264786-10264805 Msa0055310:CDS 50.0%
!! AAGAAGTGTCCGACTCTGAC+CGG - chr1_2:10264826-10264845 Msa0055310:CDS 50.0%
GATTCCTTGATCCCCAACAC+CGG + chr1_2:10264950-10264969 None:intergenic 50.0%
TGAGAGAGGCTTCTGGGTTA+TGG - chr1_2:10265113-10265132 Msa0055310:CDS 50.0%
GAGAGAGGCTTCTGGGTTAT+GGG - chr1_2:10265114-10265133 Msa0055310:CDS 50.0%
CTCACAATTGCATCCTGCAG+AGG - chr1_2:10265168-10265187 Msa0055310:CDS 50.0%
! AACATCGGTTACTCCTCTGC+AGG + chr1_2:10265184-10265203 None:intergenic 50.0%
TGCAGAGGAGTAACCGATGT+TGG - chr1_2:10265183-10265202 Msa0055310:CDS 50.0%
GCAGAGGAGTAACCGATGTT+GGG - chr1_2:10265184-10265203 Msa0055310:CDS 50.0%
GGACGCCGAAAAACCCAAAT+TGG + chr1_2:10265356-10265375 None:intergenic 50.0%
!! GGTAAGCTGCTTTGGGATCA+AGG - chr1_2:10265413-10265432 Msa0055310:CDS 50.0%
!! CTGCTTTGGGATCAAGGATC+TGG - chr1_2:10265419-10265438 Msa0055310:CDS 50.0%
TGGGATCAAGGATCTGGACT+TGG - chr1_2:10265425-10265444 Msa0055310:CDS 50.0%
CTTAAGGGAGTCACAGATGC+TGG - chr1_2:10265579-10265598 Msa0055310:CDS 50.0%
TCCATTGCTTGAGAGCTCTG+AGG - chr1_2:10265608-10265627 Msa0055310:CDS 50.0%
TCATCCCTGGTCAATCTGCA+TGG - chr1_2:10265687-10265706 Msa0055310:CDS 50.0%
CCAACCATGCAGATTGACCA+GGG + chr1_2:10265694-10265713 None:intergenic 50.0%
TCCAACCATGCAGATTGACC+AGG + chr1_2:10265695-10265714 None:intergenic 50.0%
TTGTGTGCGATCTCCGATTC+CGG - chr1_2:10265816-10265835 Msa0055310:CDS 50.0%
TTCTCTGTCAGGCTGCACTT+TGG - chr1_2:10265884-10265903 Msa0055310:intron 50.0%
GTCAGGCTGCACTTTGGTTA+CGG - chr1_2:10265890-10265909 Msa0055310:intron 50.0%
AGAACACAACTACCGGGTTC+TGG - chr1_2:10266291-10266310 Msa0055310:intron 50.0%
!! AACTACCGGGTTCTGGAGTT+AGG - chr1_2:10266298-10266317 Msa0055310:intron 50.0%
CAACTTGAGGGCCAAGAGAC+AGG + chr1_2:10264198-10264217 None:intergenic 55.0%
GGGATACCTTTCCCGAAGCT+TGG - chr1_2:10264510-10264529 Msa0055310:CDS 55.0%
GCAGTTGGAACTGCATCACG+AGG - chr1_2:10264571-10264590 Msa0055310:CDS 55.0%
GTTGGAACTGCATCACGAGG+AGG - chr1_2:10264574-10264593 Msa0055310:CDS 55.0%
! CGCGTTCTGAGTTGCTTCCA+CGG + chr1_2:10264618-10264637 None:intergenic 55.0%
CGTGGAAGCAACTCAGAACG+CGG - chr1_2:10264616-10264635 Msa0055310:CDS 55.0%
!! AGAAGTGTCCGACTCTGACC+GGG - chr1_2:10264827-10264846 Msa0055310:CDS 55.0%
! ATCAAGGACTGTGCCGGTGT+TGG - chr1_2:10264934-10264953 Msa0055310:CDS 55.0%
! TCAAGGACTGTGCCGGTGTT+GGG - chr1_2:10264935-10264954 Msa0055310:CDS 55.0%
GTTGGGGATCAAGGAATCGC+TGG - chr1_2:10264952-10264971 Msa0055310:CDS 55.0%
GGGTAGCGTTGCCAAATCCA+GGG + chr1_2:10265506-10265525 None:intergenic 55.0%
AGGGTAGCGTTGCCAAATCC+AGG + chr1_2:10265507-10265526 None:intergenic 55.0%
GCCTCAGAGCTCTCAAGCAA+TGG + chr1_2:10265612-10265631 None:intergenic 55.0%
!! TTGCTTGAGAGCTCTGAGGC+TGG - chr1_2:10265612-10265631 Msa0055310:CDS 55.0%
CCCTGGTCAATCTGCATGGT+TGG - chr1_2:10265691-10265710 Msa0055310:CDS 55.0%
GGAATCGGAGATCGCACACA+AGG + chr1_2:10265817-10265836 None:intergenic 55.0%
TGTGTGCGATCTCCGATTCC+GGG - chr1_2:10265817-10265836 Msa0055310:CDS 55.0%
GCTGCACTTTGGTTACGGAC+AGG - chr1_2:10265895-10265914 Msa0055310:intron 55.0%
GAAAAAGGGACCCGAGTCAC+TGG + chr1_2:10266162-10266181 None:intergenic 55.0%
!! GTGACTCGGGTCCCTTTTTC+CGG - chr1_2:10266162-10266181 Msa0055310:intron 55.0%
!!! AGCCTTGTTTTCGAGGGCCT+TGG - chr1_2:10266519-10266538 Msa0055310:five_prime_UTR 55.0%
GAACGCGGCGTGACAACTCT+AGG - chr1_2:10264631-10264650 Msa0055310:CDS 60.0%
! CAAGGACTGTGCCGGTGTTG+GGG - chr1_2:10264936-10264955 Msa0055310:CDS 60.0%
! TGTGCCGGTGTTGGGGATCA+AGG - chr1_2:10264943-10264962 Msa0055310:CDS 60.0%
CAGGGCTGCTATCCCGGAAT+CGG + chr1_2:10265832-10265851 None:intergenic 60.0%
GGCCAAGGCCCTCGAAAACA+AGG + chr1_2:10266524-10266543 None:intergenic 60.0%
! ATAACTTGCCGCCACGGCCA+AGG + chr1_2:10266539-10266558 None:intergenic 60.0%
CGATTCCGGGATAGCAGCCC+TGG - chr1_2:10265830-10265849 Msa0055310:CDS 65.0%
GTGTGCCAGGGCTGCTATCC+CGG + chr1_2:10265838-10265857 None:intergenic 65.0%
!! GTTTTCGAGGGCCTTGGCCG+TGG - chr1_2:10266525-10266544 Msa0055310:five_prime_UTR 65.0%
TTCGAGGGCCTTGGCCGTGG+CGG - chr1_2:10266528-10266547 Msa0055310:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 10263180 10266824 10263180 ID=Msa0055310;Name=Msa0055310
chr1_2 mRNA 10263180 10266824 10263180 ID=Msa0055310-mRNA-1;Parent=Msa0055310;Name=Msa0055310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=342|1|1|1|0|0.5|2|778|643
chr1_2 exon 10263180 10265864 10263180 ID=Msa0055310-mRNA-1:exon:3824;Parent=Msa0055310-mRNA-1
chr1_2 exon 10266458 10266824 10266458 ID=Msa0055310-mRNA-1:exon:3823;Parent=Msa0055310-mRNA-1
chr1_2 five_prime_UTR 10266483 10266824 10266483 ID=Msa0055310-mRNA-1:five_prime_utr;Parent=Msa0055310-mRNA-1
chr1_2 CDS 10266458 10266482 10266458 ID=Msa0055310-mRNA-1:cds;Parent=Msa0055310-mRNA-1
chr1_2 CDS 10263958 10265864 10263958 ID=Msa0055310-mRNA-1:cds;Parent=Msa0055310-mRNA-1
chr1_2 three_prime_UTR 10263180 10263957 10263180 ID=Msa0055310-mRNA-1:three_prime_utr;Parent=Msa0055310-mRNA-1
Gene Sequence

>Msa0055310

ATGTCTCAAGTCTTCGGCTTTTCTGGTGATAGCTTTTGCCATGGTGGGTTATACACAAACCCCAAGGAAGCAAATTTCTTCCTGTCTCTTGGCCCTCAAGTTGATGTCTACTATCCACCTCAGAAGAGATCACGTGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTTGAGCAGAAGCAGAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAAAGGAGTGCATCTGCTTGTGTTTCCAAACGCTGGCTTATGCTTCTGAGCAATATTTGCAAGAGTGAAATCTGTAGCAACAAAAGTACCTCCTCAAATGACGAGAATAAAATGGATAGTGACTGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGAAGCTTGGAAGGAAAGAAGGCAACCGATGTTAGACTTGCTGCTATTGCAGTTGGAACTGCATCACGAGGAGGATTAGGGAAGCTTTCAATCCGTGGAAGCAACTCAGAACGCGGCGTGACAACTCTAGGTCTCAAAGCAGTTGCTAGTGGATGTCCTTCTCTAAAGTCTTTCTCTTTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTTATTGAGATCGCTAATGGATGTCAAAAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCCGACAAGGCTTTAATCGCAGTTGCAAAGAAGTGTCCGACTCTGACCGGGTTATCATTAGAGTCTTGTCCTAGCATTCGCAATGAAGGTCTACAAGCCATTGGAAAGTTCTGCCCAAATCTTAAGGTTATATCTATCAAGGACTGTGCCGGTGTTGGGGATCAAGGAATCGCTGGCCTGTTTTCTTCGACTTCTTTGGTTCTGACAAAGGTGAAGCTTCAAGCACTGGCTGTTTCTGATCTCTCTCTAGCTGTTATTGGACACTATGGCAAAACAGTTACCGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGAGGCTTCTGGGTTATGGGAAATGCTAATGGATTGCATAAACTGAAGTCACTCACAATTGCATCCTGCAGAGGAGTAACCGATGTTGGGATTGAAGCTGTTGGAAAGGGCTGTCCTAATTTGAAAAGCGTACATCTTCATAAGTGTGCATTTCTCTCAGACAACGGATTGATTTCATTCACCAAGGCTGCTATATCACTTGAAAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTTTTTCTATGGTAAGCTGCTTTGGGATCAAGGATCTGGACTTGGAATTGTCACCTGTATCTCATTGTGAATCACTTCGTTCATTATCGATCTGTAACTGCCCTGGATTTGGCAACGCTACCCTTTCTGTACTCGGAAAGTTGTGCCCTCAGCTTCAACAAGTTGAATTAACTGGACTTAAGGGAGTCACAGATGCTGGGTTGCTTCCATTGCTTGAGAGCTCTGAGGCTGGTCTTGTTAAAGTTAATCTCAGTGGTTGCATCAATCTTACCGACAAAGTAGTTTCATCCCTGGTCAATCTGCATGGTTGGACTCTCGAAATTCTGAACCTTGAAGGTTGTAAAAATATCAGCAATGCTAGCTTGATAGCAATTGCTGAGCATTGCCAATTGCTTTGTGATCTTGATGTTTCCTTGTGTGCGATCTCCGATTCCGGGATAGCAGCCCTGGCACACGCAAAACAGATAAATCTACAGATTCTTTCTCTGTCAGGCTGCACTTTGGTTACGGACAGGAGCTTACCCGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTAAATATCCAGCATTGCAATTCAATCAGCAGCAGCGCTGTTGAGATGCTTGTTGAACATCTTTGGAGGTGTGACATCCTTTCCTGA
Protein sequence

>Msa0055310

MSQVFGFSGDSFCHGGLYTNPKEANFFLSLGPQVDVYYPPQKRSRVSVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNICKSEICSNKSTSSNDENKMDSDCEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSERGVTTLGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALIAVAKKCPTLTGLSLESCPSIRNEGLQAIGKFCPNLKVISIKDCAGVGDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNANGLHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKAFSMVSCFGIKDLDLELSPVSHCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCINLTDKVVSSLVNLHGWTLEILNLEGCKNISNASLIAIAEHCQLLCDLDVSLCAISDSGIAALAHAKQINLQILSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSAVEMLVEHLWRCDILS*