AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0620670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620670 MtrunA17_Chr1g0149351 97.356 643 17 0 1 643 1 643 0.0 1261
Msa0620670 MtrunA17_Chr3g0137771 66.202 645 210 4 1 642 1 640 0.0 840
Msa0620670 MtrunA17_Chr4g0063841 61.228 619 230 4 29 643 21 633 0.0 706
Msa0620670 MtrunA17_Chr4g0063861 58.205 390 162 1 254 643 2 390 3.16e-152 444
Msa0620670 MtrunA17_Chr4g0063861 23.587 407 252 12 180 557 6 382 2.56e-15 78.6
Msa0620670 MtrunA17_Chr4g0063861 24.382 283 158 6 161 414 92 347 2.23e-12 69.3
Msa0620670 MtrunA17_Chr4g0063851 62.329 146 50 1 35 180 30 170 3.30e-50 174
Msa0620670 MtrunA17_Chr2g0286991 27.090 598 371 17 68 633 11 575 1.06e-39 154
Msa0620670 MtrunA17_Chr2g0286991 26.357 387 268 10 145 529 205 576 2.27e-28 120
Msa0620670 MtrunA17_Chr2g0286991 28.788 264 179 4 145 408 334 588 1.10e-25 112
Msa0620670 MtrunA17_Chr2g0286991 28.182 330 202 8 176 503 281 577 1.06e-24 108
Msa0620670 MtrunA17_Chr4g0004901 29.505 505 294 21 129 606 162 631 4.35e-31 129
Msa0620670 MtrunA17_Chr4g0004901 28.529 340 205 9 175 513 366 668 8.53e-28 119
Msa0620670 MtrunA17_Chr4g0004901 26.347 334 212 11 321 628 124 449 4.96e-14 75.5
Msa0620670 MtrunA17_Chr7g0272131 29.478 441 274 13 191 606 186 614 6.03e-29 122
Msa0620670 MtrunA17_Chr7g0272131 26.898 461 274 14 205 611 92 543 9.18e-23 103
Msa0620670 MtrunA17_Chr7g0272131 29.150 247 170 4 176 422 350 591 8.51e-21 97.1
Msa0620670 MtrunA17_Chr7g0272131 24.279 416 255 12 176 544 273 675 3.00e-18 89.0
Msa0620670 MtrunA17_Chr7g0272131 27.273 264 179 6 174 433 399 653 4.93e-18 88.2
Msa0620670 MtrunA17_Chr1g0212071 27.177 379 254 8 66 436 18 382 5.08e-28 117
Msa0620670 MtrunA17_Chr1g0212071 28.968 252 171 4 142 391 145 390 2.37e-20 94.0
Msa0620670 MtrunA17_Chr1g0212071 25.507 345 219 9 233 569 68 382 1.04e-19 92.0
Msa0620670 MtrunA17_Chr1g0212071 25.143 350 195 7 202 518 95 410 2.00e-19 91.3
Msa0620670 MtrunA17_Chr1g0212071 28.571 196 136 4 438 632 94 286 2.63e-13 72.4
Msa0620670 MtrunA17_Chr8g0347711 28.184 369 234 7 63 417 10 361 4.46e-25 107
Msa0620670 MtrunA17_Chr8g0347711 28.000 300 185 8 360 635 75 367 4.34e-17 84.0
Msa0620670 MtrunA17_Chr4g0008501 22.811 434 287 13 180 588 158 568 1.47e-20 96.3
Msa0620670 MtrunA17_Chr3g0125671 29.474 190 107 2 210 399 123 285 3.07e-19 90.1
Msa0620670 MtrunA17_Chr3g0125671 26.341 205 133 4 176 377 141 330 1.20e-13 73.2
Msa0620670 MtrunA17_Chr1g0159531 26.577 222 124 3 204 413 105 299 2.47e-18 87.0
Msa0620670 MtrunA17_Chr1g0159531 27.751 209 140 2 180 377 107 315 4.05e-15 77.4
Msa0620670 MtrunA17_Chr1g0159531 26.368 201 109 3 143 307 128 325 3.04e-11 65.5
Msa0620670 MtrunA17_Chr1g0150971 25.366 410 242 15 188 582 339 699 6.37e-18 88.2
Msa0620670 MtrunA17_Chr1g0150971 27.129 505 265 20 174 630 490 939 6.36e-11 65.9
Msa0620670 MtrunA17_Chr4g0002671 23.618 597 352 17 65 609 3 547 1.44e-17 86.3
Msa0620670 MtrunA17_Chr1g0176031 22.508 311 177 5 228 533 92 343 4.82e-15 77.0
Msa0620670 MtrunA17_Chr1g0176031 29.208 202 137 5 174 374 120 316 6.33e-15 76.6
Msa0620670 MtrunA17_Chr1g0176031 27.907 301 196 12 336 634 58 339 1.72e-14 75.5
Msa0620670 MtrunA17_Chr1g0176031 25.820 244 169 7 319 558 79 314 1.82e-14 75.5
Msa0620670 MtrunA17_Chr1g0176031 24.275 276 195 6 191 457 81 351 3.76e-12 68.2
Msa0620670 MtrunA17_Chr1g0150991 26.050 476 276 19 180 633 167 588 5.94e-15 78.6
Msa0620670 MtrunA17_Chr5g0432971 22.660 406 264 9 216 609 199 566 4.82e-14 75.5
Msa0620670 MtrunA17_Chr4g0018891 25.562 356 201 13 202 555 189 482 4.78e-13 72.0
Msa0620670 MtrunA17_Chr4g0053361 24.726 457 278 16 66 506 44 450 1.70e-12 70.5
Msa0620670 MtrunA17_Chr4g0073771 30.726 179 108 6 229 405 102 266 1.75e-12 68.6
Msa0620670 MtrunA17_Chr5g0446541 22.128 470 299 14 176 609 145 583 1.87e-12 70.5
Msa0620670 MtrunA17_Chr1g0152951 23.729 295 199 9 201 484 137 416 5.21e-12 68.9
Msa0620670 MtrunA17_Chr4g0070541 25.090 279 195 8 346 618 397 667 1.45e-11 67.8
Msa0620670 MtrunA17_Chr4g0009861 28.169 142 80 1 172 291 165 306 3.11e-11 65.5
Msa0620670 MtrunA17_Chr1g0211631 23.529 238 150 4 174 409 296 503 3.29e-11 66.6
Msa0620670 MtrunA17_Chr3g0077831 22.571 350 217 10 202 541 192 497 3.70e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620670 AT2G25490.1 60.681 646 233 8 1 643 1 628 0.0 765
Msa0620670 AT5G25350.1 58.540 644 243 8 1 642 1 622 0.0 697
Msa0620670 AT4G15475.1 30.562 445 293 13 200 642 125 555 7.78e-44 166
Msa0620670 AT4G15475.1 27.063 606 361 16 68 633 11 575 3.04e-39 153
Msa0620670 AT4G15475.1 29.114 316 213 5 145 460 282 586 5.46e-32 131
Msa0620670 AT4G15475.1 26.166 386 245 10 145 503 205 577 4.94e-26 113
Msa0620670 AT5G27920.1 26.365 531 330 16 152 631 82 602 4.89e-31 129
Msa0620670 AT5G27920.1 23.385 449 259 14 239 609 63 504 1.40e-16 84.0
Msa0620670 AT5G23340.1 26.780 295 185 4 306 599 85 349 1.96e-25 109
Msa0620670 AT5G23340.1 23.967 363 266 5 66 426 8 362 1.99e-23 103
Msa0620670 AT5G23340.1 25.281 356 220 8 175 521 84 402 1.06e-18 89.4
Msa0620670 AT5G23340.1 22.302 278 160 4 359 635 84 306 2.68e-12 69.7
Msa0620670 AT5G01720.1 26.271 354 222 8 175 500 238 580 1.69e-23 105
Msa0620670 AT5G01720.1 27.397 511 284 16 176 610 85 584 3.13e-23 105
Msa0620670 AT5G01720.1 27.301 326 227 9 307 632 61 376 1.16e-12 71.6
Msa0620670 AT5G01720.1 24.675 385 236 12 226 575 58 423 4.09e-12 69.7
Msa0620670 AT1G21410.2 25.305 328 161 8 204 531 106 349 1.50e-19 91.3
Msa0620670 AT1G21410.2 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0620670 AT1G21410.2 23.256 215 148 2 180 377 108 322 3.17e-13 72.0
Msa0620670 AT1G21410.1 25.305 328 161 8 204 531 106 349 1.50e-19 91.3
Msa0620670 AT1G21410.1 31.214 173 114 5 464 634 102 271 3.79e-14 75.1
Msa0620670 AT1G21410.1 23.256 215 148 2 180 377 108 322 3.17e-13 72.0
Msa0620670 AT1G77000.2 29.592 196 111 2 204 399 106 274 3.80e-19 90.1
Msa0620670 AT1G77000.2 25.641 234 140 4 180 379 108 341 5.06e-15 77.4
Msa0620670 AT1G77000.1 29.592 196 111 2 204 399 106 274 3.80e-19 90.1
Msa0620670 AT1G77000.1 25.641 234 140 4 180 379 108 341 5.06e-15 77.4
Msa0620670 AT4G33210.1 23.830 470 265 16 131 570 289 695 5.45e-17 85.9
Msa0620670 AT3G07550.1 24.090 357 259 6 62 413 12 361 1.78e-16 82.4
Msa0620670 AT3G07550.1 24.367 316 196 8 193 500 62 342 8.29e-13 71.2
Msa0620670 AT3G07550.2 24.090 357 259 6 62 413 12 361 1.78e-16 82.4
Msa0620670 AT3G07550.2 24.367 316 196 8 193 500 62 342 8.29e-13 71.2
Msa0620670 AT3G58530.1 25.095 263 155 9 180 439 128 351 6.87e-16 80.1
Msa0620670 AT3G58530.1 21.283 343 207 6 193 530 58 342 4.14e-15 77.8
Msa0620670 AT3G58530.1 27.090 299 177 10 347 638 81 345 1.33e-14 76.3
Msa0620670 AT3G07550.3 23.596 356 243 7 58 413 8 334 6.14e-15 77.4
Msa0620670 AT3G07550.3 24.042 287 182 7 215 500 64 315 1.87e-12 69.7
Msa0620670 AT3G07550.3 28.094 299 169 9 348 641 91 348 5.50e-12 68.2
Msa0620670 AT1G55590.1 24.889 225 164 4 172 394 294 515 4.58e-14 75.9
Msa0620670 AT1G47056.1 24.512 461 290 17 41 492 15 426 2.29e-13 73.6
Msa0620670 AT1G47056.1 25.208 361 198 12 227 581 116 410 5.14e-12 69.3
Msa0620670 AT2G06040.1 24.911 281 200 6 337 610 473 749 2.97e-13 73.6
Msa0620670 AT4G07400.1 24.561 456 290 18 65 515 74 480 3.94e-13 72.8
Msa0620670 AT1G77000.3 26.630 184 82 3 204 387 106 236 5.50e-13 70.1
Msa0620670 AT1G77000.3 32.727 110 73 1 180 288 108 217 6.82e-11 63.5
Msa0620670 AT1G77000.4 26.630 184 82 3 204 387 106 236 5.50e-13 70.1
Msa0620670 AT1G77000.4 32.727 110 73 1 180 288 108 217 6.82e-11 63.5
Msa0620670 AT3G50080.1 24.222 450 259 16 57 500 33 406 1.14e-12 71.2
Msa0620670 AT1G80630.1 22.886 402 237 9 200 569 148 508 4.90e-12 69.3
Msa0620670 AT5G67250.1 25.325 308 208 11 201 500 119 412 1.34e-11 67.8
Msa0620670 AT2G17020.1 23.729 531 290 21 183 608 45 565 1.41e-11 68.2
Msa0620670 AT1G80570.1 25.146 342 187 12 306 603 84 400 9.79e-11 65.1
Msa0620670 AT1G80570.3 25.146 342 187 12 306 603 84 400 9.79e-11 65.1

Find 209 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAAGTCTTTCTCTTTA+TGG 0.012962 4_2:-72413952 Msa0620670:CDS
TGCCACAGAATTACCCAATT+TGG 0.171018 4_2:-72413296 Msa0620670:CDS
CTTACCCGCTTTGAGAAAAT+TGG 0.171059 4_2:-72412715 Msa0620670:CDS
TTGGAAACCCTAATTGAAAT+AGG 0.191955 4_2:+72415286 None:intergenic
CTTTGATTGGAATTCTGTTT+TGG 0.208386 4_2:-72412413 Msa0620670:three_prime_UTR
GATCTCTCTCTAGCTGTTAT+TGG 0.220084 4_2:-72413599 Msa0620670:CDS
TAACATTTGGGAGGAAATTA+AGG 0.226363 4_2:+72413546 None:intergenic
TGACTGCATACTCCGGAAAA+AGG 0.239112 4_2:+72412461 None:intergenic
TGTTATGAAATCGTGGAAAT+TGG 0.244856 4_2:+72415267 None:intergenic
TTAATCTCACATGGCAATTT+AGG 0.252881 4_2:-72412578 Msa0620670:three_prime_UTR
ATAGATATAACCTTAAGATT+TGG 0.265371 4_2:+72413722 None:intergenic
TTAGGAATCTTTGTTACTTT+GGG 0.266239 4_2:-72412320 Msa0620670:three_prime_UTR
TCGGTATTAGTGCTCTTGTT+AGG 0.269533 4_2:-72412171 Msa0620670:three_prime_UTR
CTTCAACAAGTTGAATTAAC+TGG 0.274879 4_2:-72413080 Msa0620670:CDS
TGATCAAGACCCAAAGTTAA+TGG 0.275780 4_2:+72412503 None:intergenic
CCTTCTTTCCTTCCAAGCTT+CGG 0.280846 4_2:+72414113 None:intergenic
TGAGAGAGGCTTCTGGGTTA+TGG 0.281774 4_2:-72413522 Msa0620670:CDS
ATCTGTAACTGCCCTGGATT+TGG 0.285015 4_2:-72413143 Msa0620670:CDS
CAGGAAGAAATTTGCTTCCT+TGG 0.285276 4_2:+72414459 None:intergenic
TTGTGTGCGATCTCCGATTC+CGG 0.288491 4_2:-72412819 Msa0620670:CDS
AATATCAAAACAAATGCTTT+TGG 0.289474 4_2:+72411883 None:intergenic
CTTCTTTCCTTCCAAGCTTC+GGG 0.291790 4_2:+72414114 None:intergenic
CTCAAATGACGAGAATAAAA+TGG 0.294170 4_2:-72414176 Msa0620670:CDS
GAGATTAAATCTTGCAGTTC+AGG 0.295751 4_2:+72412593 None:intergenic
ACTGCATCACGAGGAGGATT+AGG 0.301726 4_2:-72414055 Msa0620670:CDS
GAGATATGCAGCCATTTAAA+AGG 0.304934 4_2:+72412370 None:intergenic
AAAATTGGGCCACACCCTTT+TGG 0.309297 4_2:-72412700 Msa0620670:CDS
TTTCTATGGTGAGCTGCTTT+GGG 0.310632 4_2:-72413229 Msa0620670:CDS
TGTGGCACTCTTCCAATTGT+AGG 0.329715 4_2:+72413312 None:intergenic
TCAAGGACTGTGCCGGTGTT+GGG 0.330559 4_2:-72413700 Msa0620670:CDS
GTTAGGAATCTTTGTTACTT+TGG 0.334438 4_2:-72412321 Msa0620670:three_prime_UTR
AGATGCTTGTTGAACATCTT+TGG 0.338078 4_2:-72412632 Msa0620670:CDS
TAGATATAACCTTAAGATTT+GGG 0.344478 4_2:+72413723 None:intergenic
AGAACACATCTACCGGGTTC+TGG 0.348272 4_2:-72412345 Msa0620670:three_prime_UTR
GCCACAGAATTACCCAATTT+GGG 0.348800 4_2:-72413295 Msa0620670:CDS
GTTGAATTAACTGGACTTAA+GGG 0.349439 4_2:-72413071 Msa0620670:CDS
AGGAAGAAATTTGCTTCCTT+GGG 0.350453 4_2:+72414460 None:intergenic
GCAAATTTCTTCCTGTCTCT+TGG 0.351075 4_2:-72414451 Msa0620670:CDS
CTCGAAATTCTGAACCTTGA+AGG 0.357149 4_2:-72412918 Msa0620670:CDS
ATGTTAGTGAGAGAGGCTTC+TGG 0.357800 4_2:-72413529 Msa0620670:CDS
AAGCCTCTCTCACTAACATT+TGG 0.362156 4_2:+72413533 None:intergenic
AGTTGAATTAACTGGACTTA+AGG 0.362492 4_2:-72413072 Msa0620670:CDS
ATCTGCCCTTTGTGTTTGTA+TGG 0.366047 4_2:-72411946 Msa0620670:three_prime_UTR
GTTTCTTCTGTTGGTGATGA+AGG 0.367259 4_2:-72413926 Msa0620670:CDS
TTATGGAATGTTTCTTCTGT+TGG 0.375011 4_2:-72413935 Msa0620670:CDS
GAGAGAGGCTTCTGGGTTAT+GGG 0.375727 4_2:-72413521 Msa0620670:CDS
GCCTCTTTGAGATCTTTAGA+AGG 0.392355 4_2:-72414306 Msa0620670:CDS
TGGGTTATGGGAAATGCTAA+TGG 0.394159 4_2:-72413509 Msa0620670:CDS
TTAGGGTTGTTGCAGTTGTC+TGG 0.399270 4_2:-72412153 Msa0620670:three_prime_UTR
GTCAGGCTGCACTTTGGTTA+CGG 0.399322 4_2:-72412745 Msa0620670:CDS
CCCTGGTCAATCTGCATGGT+TGG 0.402559 4_2:-72412944 Msa0620670:CDS
ATCCATTAGCGATCTCAATA+AGG 0.403036 4_2:+72413903 None:intergenic
GAAAGTGACTGTGAAGAGTT+TGG 0.407597 4_2:-72414154 Msa0620670:CDS
TGTGTGCGATCTCCGATTCC+GGG 0.408544 4_2:-72412818 Msa0620670:CDS
CGGTATTAGTGCTCTTGTTA+GGG 0.411071 4_2:-72412170 Msa0620670:three_prime_UTR
ATCACTTGAAAGCCTACAAT+TGG 0.412655 4_2:-72413324 Msa0620670:CDS
CCAAAGAAGTCGAAGAAAAC+AGG 0.414246 4_2:+72413660 None:intergenic
CTGCATCACGAGGAGGATTA+GGG 0.415640 4_2:-72414054 Msa0620670:CDS
TGGAAACCCTAATTGAAATA+GGG 0.415958 4_2:+72415287 None:intergenic
AGCCTCTCTCACTAACATTT+GGG 0.422860 4_2:+72413534 None:intergenic
GTGTGCCAGGGCTGCTATCC+CGG 0.423492 4_2:+72412800 None:intergenic
CTGCTTTGGGATCAAGGATC+TGG 0.424806 4_2:-72413216 Msa0620670:CDS
CTTAAGGGAGTCACAGATGC+TGG 0.425211 4_2:-72413056 Msa0620670:CDS
GGCCTTATTGAGATCGCTAA+TGG 0.425507 4_2:-72413905 Msa0620670:CDS
CATCAAGATCACAAAGCAAT+TGG 0.425806 4_2:+72412847 None:intergenic
ATCTCAAAGAGGCACTCATC+TGG 0.426649 4_2:+72414316 None:intergenic
AAAGTTCTGCCCAAATCTTA+AGG 0.427807 4_2:-72413732 Msa0620670:CDS
CTACAGATTCTTTCTCTGTC+AGG 0.430438 4_2:-72412762 Msa0620670:CDS
ATTTGATTTGTGAGTATTGA+AGG 0.431110 4_2:+72415201 None:intergenic
CGATTCCGGGATAGCAGCCC+TGG 0.432829 4_2:-72412805 Msa0620670:CDS
TGTTAGTGAGAGAGGCTTCT+GGG 0.434709 4_2:-72413528 Msa0620670:CDS
AAAGCCTTGTCGGAAATTGC+AGG 0.435432 4_2:+72413845 None:intergenic
AGGGTAGCGTTGCCAAATCC+AGG 0.436782 4_2:+72413131 None:intergenic
TTAATGAACCATTCATTGTA+TGG 0.438116 4_2:-72415434 Msa0620670:five_prime_UTR
CATTCTCCATCGAAAACAAA+TGG 0.441047 4_2:+72414376 None:intergenic
TTACCCGCTTTGAGAAAATT+GGG 0.441746 4_2:-72412714 Msa0620670:CDS
ATCTACCGGGTTCTGGAGTT+AGG 0.442050 4_2:-72412338 Msa0620670:three_prime_UTR
TAACTGTGGTGCAAAATTGA+AGG 0.443191 4_2:-72413255 Msa0620670:CDS
CAGAAGCATAAGCCAGCGTT+TGG 0.444467 4_2:+72414243 None:intergenic
GAATCTTTGTTACTTTGGGT+TGG 0.446597 4_2:-72412316 Msa0620670:three_prime_UTR
GGTGAGCTGCTTTGGGATCA+AGG 0.449178 4_2:-72413222 Msa0620670:CDS
GCACTCCTTTCTTCACCAAC+AGG 0.449873 4_2:+72414280 None:intergenic
GCTGGATATTTAGTCCCAAA+AGG 0.450825 4_2:+72412685 None:intergenic
ATCAAGGACTGTGCCGGTGT+TGG 0.452196 4_2:-72413701 Msa0620670:CDS
AACTTTAACAAGACCAGCCT+CGG 0.457238 4_2:+72413010 None:intergenic
CTAGCTGTTATTGGACACTA+TGG 0.460329 4_2:-72413590 Msa0620670:CDS
TTCAAGTGATATAGCAGCCT+TGG 0.460685 4_2:+72413337 None:intergenic
GGGATACCTTTCCCGAAGCT+TGG 0.461300 4_2:-72414125 Msa0620670:CDS
CAACTTGAGGGCCAAGAGAC+AGG 0.463141 4_2:+72414440 None:intergenic
TGTGCCGGTGTTGGGGATCA+AGG 0.466975 4_2:-72413692 Msa0620670:CDS
TTATCGATCTGTAACTGCCC+TGG 0.467205 4_2:-72413149 Msa0620670:CDS
CCGAAGCTTGGAAGGAAAGA+AGG 0.469354 4_2:-72414113 Msa0620670:CDS
AATGATAACTCGGTCAGATT+CGG 0.472690 4_2:+72413800 None:intergenic
CTCCCAAATGTTAGTGAGAG+AGG 0.473423 4_2:-72413536 Msa0620670:CDS
CGCGTTCTGAGTTGCTTCCA+CGG 0.473495 4_2:+72414020 None:intergenic
AACTGCGGTTAAAGCCTTGT+CGG 0.474915 4_2:+72413835 None:intergenic
TTGCTTGAGAGCTCCGAGGC+TGG 0.476623 4_2:-72413023 Msa0620670:CDS
CTGCTTGTGTTTCCAAACGC+TGG 0.478903 4_2:-72414255 Msa0620670:CDS
TGGGATCAAGGATCTGGACT+TGG 0.479690 4_2:-72413210 Msa0620670:CDS
AGACTTGCTGCTATTGCAGT+TGG 0.480536 4_2:-72414079 Msa0620670:CDS
CAGGGCTGCTATCCCGGAAT+CGG 0.488751 4_2:+72412806 None:intergenic
GCAGAGGAGTAACCGATGTT+GGG 0.492742 4_2:-72413451 Msa0620670:CDS
ATCTCTGAGAACACATCTAC+CGG 0.494866 4_2:-72412352 Msa0620670:three_prime_UTR
AACGCTACCCTTTCTGTACT+CGG 0.496998 4_2:-72413119 Msa0620670:CDS
ACGGATTCCCATACAATGAA+TGG 0.499139 4_2:+72415426 None:intergenic
TTCTCTGTCAGGCTGCACTT+TGG 0.500531 4_2:-72412751 Msa0620670:CDS
TGTAAGAGACAAGTGGGAAA+CGG 0.500705 4_2:+72415407 None:intergenic
TTGATCATCATCCAGCGACT+CGG 0.505056 4_2:-72412487 Msa0620670:three_prime_UTR
GCACCCATGTCTCAAGTCTT+CGG 0.505219 4_2:-72415117 Msa0620670:exon
CAGGGATGAAACTACTTTGT+CGG 0.506121 4_2:+72412962 None:intergenic
TCTTAAGGTTATATCTATCA+AGG 0.507799 4_2:-72413717 Msa0620670:CDS
TGCAGAGGAGTAACCGATGT+TGG 0.509560 4_2:-72413452 Msa0620670:CDS
GCCTCGGAGCTCTCAAGCAA+TGG 0.512849 4_2:+72413026 None:intergenic
GGTTGCCTGTTGGTGAAGAA+AGG 0.514240 4_2:-72414285 Msa0620670:CDS
AGTGATTCACAAGGAGATAC+AGG 0.516560 4_2:+72413179 None:intergenic
GACTTCTTTGGTTCTGACAA+AGG 0.516837 4_2:-72413648 Msa0620670:CDS
TGCTGATTGAATTGCAATGC+TGG 0.518629 4_2:+72412667 None:intergenic
TTTGACTCAAACGGAGGTAT+CGG 0.518846 4_2:-72412190 Msa0620670:three_prime_UTR
AGACCTTCATTGCGAATGCT+AGG 0.519816 4_2:+72413767 None:intergenic
TGTCCTAGCATTCGCAATGA+AGG 0.520385 4_2:-72413770 Msa0620670:CDS
TAATGAACCATTCATTGTAT+GGG 0.522711 4_2:-72415433 Msa0620670:five_prime_UTR
TGATCATCATCCAGCGACTC+GGG 0.524753 4_2:-72412486 Msa0620670:three_prime_UTR
GAACGCGGCGTGACAACTCT+AGG 0.525236 4_2:-72414004 Msa0620670:CDS
CGTTTGAGTCAAAACACCTA+TGG 0.525854 4_2:+72412200 None:intergenic
TACCTTTCCCGAAGCTTGGA+AGG 0.529475 4_2:-72414121 Msa0620670:CDS
CAAGGACTGTGCCGGTGTTG+GGG 0.530233 4_2:-72413699 Msa0620670:CDS
TGCTTGTTGAACATCTTTGG+AGG 0.531336 4_2:-72412629 Msa0620670:CDS
TTCCTTCCAAGCTTCGGGAA+AGG 0.533717 4_2:+72414119 None:intergenic
CTGGATATTTAGTCCCAAAA+GGG 0.534654 4_2:+72412686 None:intergenic
TCCAACCATGCAGATTGACC+AGG 0.536554 4_2:+72412943 None:intergenic
GGTCTCAAAGCAGTTGCTAG+TGG 0.537588 4_2:-72413983 Msa0620670:CDS
GGCCAAGGCCCTCGAAAACA+AGG 0.538671 4_2:+72412115 None:intergenic
AACATCGGTTACTCCTCTGC+AGG 0.539479 4_2:+72413454 None:intergenic
AAAGGTGAAGCTTCAAGCAC+TGG 0.541994 4_2:-72413630 Msa0620670:CDS
AGCTAGAGAGAGATCAGAAA+CGG 0.542100 4_2:+72413607 None:intergenic
CAGAGGGAACTAAGAAATTG+TGG 0.543960 4_2:+72412256 None:intergenic
TTCGAGGGCCTTGGCCGTGG+CGG 0.544881 4_2:-72412108 Msa0620670:three_prime_UTR
ATAACTTGCCGCCACGGCCA+AGG 0.549106 4_2:+72412100 None:intergenic
GGGATTGAAGCTGTTGGAAA+GGG 0.549164 4_2:-72413431 Msa0620670:CDS
TCATCCCTGGTCAATCTGCA+TGG 0.552095 4_2:-72412948 Msa0620670:CDS
GTTGGGGATCAAGGAATCGC+TGG 0.553667 4_2:-72413683 Msa0620670:CDS
TAAATCTTGCAGTTCAGGAA+AGG 0.554597 4_2:+72412598 None:intergenic
CTGTGAAGAGTTTGGAGGTG+AGG 0.561043 4_2:-72414146 Msa0620670:CDS
GATAGTAGACATCAACTTGA+GGG 0.562773 4_2:+72414428 None:intergenic
CGACAAAGTAGTTTCATCCC+TGG 0.562846 4_2:-72412961 Msa0620670:CDS
ATCTGTACCACGGTGTCCAT+AGG 0.566349 4_2:-72412216 Msa0620670:three_prime_UTR
TGTGAAGAGTTTGGAGGTGA+GGG 0.567927 4_2:-72414145 Msa0620670:CDS
AATTCAACTTGTTGAAGCTG+AGG 0.567931 4_2:+72413086 None:intergenic
CAAAACAGAATTCCAATCAA+AGG 0.568133 4_2:+72412414 None:intergenic
ATATACCATACAAACACAAA+GGG 0.571845 4_2:+72411941 None:intergenic
GCTGCACTTTGGTTACGGAC+AGG 0.573743 4_2:-72412740 Msa0620670:CDS
ATATCTATCAAGGACTGTGC+CGG 0.574521 4_2:-72413707 Msa0620670:CDS
ACAACTTTCCGAGTACAGAA+AGG 0.575435 4_2:+72413111 None:intergenic
AAAGGAAGCAACCACATACA+TGG 0.575615 4_2:+72412388 None:intergenic
AAAGAGAAAGACTTTAGAGA+AGG 0.577504 4_2:+72413956 None:intergenic
CAACTTTCCGAGTACAGAAA+GGG 0.577567 4_2:+72413112 None:intergenic
ATTCAACTTGTTGAAGCTGA+GGG 0.582352 4_2:+72413087 None:intergenic
TTAAGGGAGTCACAGATGCT+GGG 0.582917 4_2:-72413055 Msa0620670:CDS
AAATTGCAGGGCATTTGCAA+AGG 0.585154 4_2:+72413858 None:intergenic
GAATTTGTGTTATGAAATCG+TGG 0.585664 4_2:+72415260 None:intergenic
ACATGTATAACTTGCCGCCA+CGG 0.587512 4_2:+72412094 None:intergenic
CTGCAAGATTTAATCTCACA+TGG 0.587811 4_2:-72412587 Msa0620670:three_prime_UTR
CTTGTTAAAGTTAATCTCAG+TGG 0.588339 4_2:-72412999 Msa0620670:CDS
CGGATTGATTTCATTCACCA+AGG 0.590158 4_2:-72413354 Msa0620670:CDS
AATGAAGGTCTACAAGCCAT+TGG 0.590793 4_2:-72413755 Msa0620670:CDS
GGTTAAATGACTGCATACTC+CGG 0.591159 4_2:+72412454 None:intergenic
TTTATTCTCGTCATTTGAGG+AGG 0.593111 4_2:+72414180 None:intergenic
ATTTGGGCAGAACTTTCCAA+TGG 0.599132 4_2:+72413739 None:intergenic
TATTTAGTCCCAAAAGGGTG+TGG 0.603959 4_2:+72412691 None:intergenic
GAGGAAATTAAGGACAAGAT+CGG 0.606521 4_2:+72413556 None:intergenic
AAGCCTTGTCGGAAATTGCA+GGG 0.607035 4_2:+72413846 None:intergenic
TTAGGGAAGCTTGCAATCCG+TGG 0.607817 4_2:-72414037 Msa0620670:CDS
TGTGCATTTCTCTCAGACAA+CGG 0.609269 4_2:-72413374 Msa0620670:CDS
CATGCAGAAGTCTAGTTACA+CGG 0.612777 4_2:-72412543 Msa0620670:three_prime_UTR
AATATACCATACAAACACAA+AGG 0.613737 4_2:+72411940 None:intergenic
GGAAGAAATTTGCTTCCTTG+GGG 0.618210 4_2:+72414461 None:intergenic
TGGGATTGAAGCTGTTGGAA+AGG 0.620246 4_2:-72413432 Msa0620670:CDS
CTCACAATTGCATCCTGCAG+AGG 0.621245 4_2:-72413467 Msa0620670:CDS
AACAGCTTCAATCCCAACAT+CGG 0.622290 4_2:+72413439 None:intergenic
ACCCAAATTGGGTAATTCTG+TGG 0.625237 4_2:+72413294 None:intergenic
ATCTTTAGAAGGTTGCCTGT+TGG 0.625556 4_2:-72414295 Msa0620670:CDS
GGATAGTAGACATCAACTTG+AGG 0.626268 4_2:+72414427 None:intergenic
ACACGTGATCTCTTCTGAGG+TGG 0.627046 4_2:+72414406 None:intergenic
ATGCCCTGCAATTTCCGACA+AGG 0.628954 4_2:-72413849 Msa0620670:CDS
GGAATCGGAGATCGCACACA+AGG 0.629259 4_2:+72412821 None:intergenic
CGGACACTTCTTTGCAACTG+CGG 0.631276 4_2:+72413820 None:intergenic
GGGTAGCGTTGCCAAATCCA+GGG 0.632564 4_2:+72413132 None:intergenic
CTGACACGTGATCTCTTCTG+AGG 0.633789 4_2:+72414403 None:intergenic
ACAAGACTCTAATGATAACT+CGG 0.633790 4_2:+72413790 None:intergenic
GATGTTGGGATTGAAGCTGT+TGG 0.634700 4_2:-72413437 Msa0620670:CDS
CTCTCTCACTAACATTTGGG+AGG 0.636568 4_2:+72413537 None:intergenic
AGTGACTGTGAAGAGTTTGG+AGG 0.636749 4_2:-72414151 Msa0620670:CDS
AAAGCCGAAGACTTGAGACA+TGG 0.637618 4_2:+72415113 None:intergenic
AAGCCGAAGACTTGAGACAT+GGG 0.649190 4_2:+72415114 None:intergenic
GATTCCTTGATCCCCAACAC+CGG 0.655421 4_2:+72413688 None:intergenic
TCCATTGCTTGAGAGCTCCG+AGG 0.656114 4_2:-72413027 Msa0620670:CDS
ACCTTCTAAAGATCTCAAAG+AGG 0.665153 4_2:+72414305 None:intergenic
CGTGGAAGCAACTCAGAACG+CGG 0.669342 4_2:-72414019 Msa0620670:CDS
TCTCTGAGAACACATCTACC+GGG 0.675257 4_2:-72412351 Msa0620670:three_prime_UTR
GTTGGAACTGCATCACGAGG+AGG 0.679979 4_2:-72414061 Msa0620670:CDS
AGATTCCTAACTCCAGAACC+CGG 0.680416 4_2:+72412333 None:intergenic
CCAACCATGCAGATTGACCA+GGG 0.686419 4_2:+72412944 None:intergenic
GGTTTGTGTATAACCCACCA+TGG 0.686541 4_2:+72414482 None:intergenic
AATAGCAGCAAGTCTAACAT+CGG 0.688914 4_2:+72414087 None:intergenic
AATGAACGAAGTGATTCACA+AGG 0.695476 4_2:+72413170 None:intergenic
GCAGTTGGAACTGCATCACG+AGG 0.700255 4_2:-72414064 Msa0620670:CDS
AAAAGAAAGAGAAAATTTGG+GGG 0.715461 4_2:+72415314 None:intergenic
TGGGTTATACACAAACCCCA+AGG 0.726645 4_2:-72414476 Msa0620670:CDS
CAAAACACCTATGGACACCG+TGG 0.762343 4_2:+72412209 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAGAGAAAATTT+GGG + chr4_2:72411986-72412005 None:intergenic 15.0%
!! AAAAAAAGAAAGAGAAAATT+TGG + chr4_2:72411987-72412006 None:intergenic 15.0%
!!! TATTTGATTCATAGATTTTT+AGG - chr4_2:72412236-72412255 Msa0620670:three_prime_UTR 15.0%
!! AAAAAGAAAGAGAAAATTTG+GGG + chr4_2:72411985-72412004 None:intergenic 20.0%
!!! AATTCTCTTAATTTGTTATG+TGG - chr4_2:72412409-72412428 Msa0620670:three_prime_UTR 20.0%
!! AGATCTATAAGATTAGTATT+TGG - chr4_2:72412491-72412510 Msa0620670:three_prime_UTR 20.0%
!! GATCTATAAGATTAGTATTT+GGG - chr4_2:72412492-72412511 Msa0620670:three_prime_UTR 20.0%
!!! TTTTACTTTTCTGATATCAT+AGG - chr4_2:72412624-72412643 Msa0620670:CDS 20.0%
!! TAGATATAACCTTAAGATTT+GGG + chr4_2:72413575-72413594 None:intergenic 20.0%
!! ATAGATATAACCTTAAGATT+TGG + chr4_2:72413576-72413595 None:intergenic 20.0%
!!! CAAATTTTATTTCATCATTG+TGG + chr4_2:72415382-72415401 None:intergenic 20.0%
!!! AATATCAAAACAAATGCTTT+TGG + chr4_2:72415415-72415434 None:intergenic 20.0%
! TTAATGAACCATTCATTGTA+TGG - chr4_2:72411861-72411880 Msa0620670:three_prime_UTR 25.0%
! TAATGAACCATTCATTGTAT+GGG - chr4_2:72411862-72411881 Msa0620670:three_prime_UTR 25.0%
!! TTTTATTGTAAGAGACAAGT+GGG + chr4_2:72411897-72411916 None:intergenic 25.0%
!! TTTTTATTGTAAGAGACAAG+TGG + chr4_2:72411898-72411917 None:intergenic 25.0%
! AATGAAAAATGAAGGGAAAA+GGG + chr4_2:72411925-72411944 None:intergenic 25.0%
! GAAGATGAATGAAAAATGAA+GGG + chr4_2:72411932-72411951 None:intergenic 25.0%
! AGAAGATGAATGAAAAATGA+AGG + chr4_2:72411933-72411952 None:intergenic 25.0%
! AAAAGAAAGAGAAAATTTGG+GGG + chr4_2:72411984-72412003 None:intergenic 25.0%
!!! TTTTTTGCCCTATTTCAATT+AGG - chr4_2:72412001-72412020 Msa0620670:three_prime_UTR 25.0%
!! TTTTTGCCCTATTTCAATTA+GGG - chr4_2:72412002-72412021 Msa0620670:three_prime_UTR 25.0%
!!! ATTTGATTTGTGAGTATTGA+AGG + chr4_2:72412097-72412116 None:intergenic 25.0%
!!! ATTCATAGATTTTTAGGTTG+TGG - chr4_2:72412242-72412261 Msa0620670:three_prime_UTR 25.0%
!!! TTCATAGATTTTTAGGTTGT+GGG - chr4_2:72412243-72412262 Msa0620670:three_prime_UTR 25.0%
!!! ATGATGATTTTGATGTTCAT+AGG - chr4_2:72412323-72412342 Msa0620670:three_prime_UTR 25.0%
!!! TCTTAATTTGTTATGTGGTA+TGG - chr4_2:72412414-72412433 Msa0620670:three_prime_UTR 25.0%
!!! ACATAGTTTTGATTGATTAG+CGG - chr4_2:72412527-72412546 Msa0620670:three_prime_UTR 25.0%
! TCTTAAGGTTATATCTATCA+AGG - chr4_2:72413578-72413597 Msa0620670:CDS 25.0%
!!! AAAATTGAAGGCTTTTTCTA+TGG - chr4_2:72414052-72414071 Msa0620670:CDS 25.0%
!!! TGATATTTTTACAACCTTCA+AGG + chr4_2:72414394-72414413 None:intergenic 25.0%
!!! TTTTTTGGTCCATTAACTTT+GGG - chr4_2:72414783-72414802 Msa0620670:intron 25.0%
! AAGGAATCTGCAAAAAAATA+TGG + chr4_2:72414865-72414884 None:intergenic 25.0%
!!! TTAGGAATCTTTGTTACTTT+GGG - chr4_2:72414975-72414994 Msa0620670:intron 25.0%
!!! AAAGGTTGTTTTTTTATACC+AGG - chr4_2:72415251-72415270 Msa0620670:five_prime_UTR 25.0%
! TGAAGCCTTAAAAAAAACTA+GGG + chr4_2:72415277-72415296 None:intergenic 25.0%
! ATGAAGCCTTAAAAAAAACT+AGG + chr4_2:72415278-72415297 None:intergenic 25.0%
! ATATACCATACAAACACAAA+GGG + chr4_2:72415357-72415376 None:intergenic 25.0%
! AATATACCATACAAACACAA+AGG + chr4_2:72415358-72415377 None:intergenic 25.0%
GAATGAAAAATGAAGGGAAA+AGG + chr4_2:72411926-72411945 None:intergenic 30.0%
TGGAAACCCTAATTGAAATA+GGG + chr4_2:72412011-72412030 None:intergenic 30.0%
TTGGAAACCCTAATTGAAAT+AGG + chr4_2:72412012-72412031 None:intergenic 30.0%
TGTTATGAAATCGTGGAAAT+TGG + chr4_2:72412031-72412050 None:intergenic 30.0%
GAATTTGTGTTATGAAATCG+TGG + chr4_2:72412038-72412057 None:intergenic 30.0%
TTAAGTGGTGAAATTTCAAC+TGG - chr4_2:72412449-72412468 Msa0620670:three_prime_UTR 30.0%
TAAGTGGTGAAATTTCAACT+GGG - chr4_2:72412450-72412469 Msa0620670:three_prime_UTR 30.0%
CTATAAGATTAGTATTTGGG+AGG - chr4_2:72412495-72412514 Msa0620670:three_prime_UTR 30.0%
!!! TTGAGAAGTTTGTTTTGCAT+AGG - chr4_2:72412655-72412674 Msa0620670:CDS 30.0%
!!! AGCAGTTTTGTTGAATTTGA+TGG - chr4_2:72412687-72412706 Msa0620670:CDS 30.0%
! CATTTTATTCTCGTCATTTG+AGG + chr4_2:72413121-72413140 None:intergenic 30.0%
CTCAAATGACGAGAATAAAA+TGG - chr4_2:72413119-72413138 Msa0620670:CDS 30.0%
! AAAGAGAAAGACTTTAGAGA+AGG + chr4_2:72413342-72413361 None:intergenic 30.0%
!! CTCTAAAGTCTTTCTCTTTA+TGG - chr4_2:72413343-72413362 Msa0620670:CDS 30.0%
TTATGGAATGTTTCTTCTGT+TGG - chr4_2:72413360-72413379 Msa0620670:CDS 30.0%
ACAAGACTCTAATGATAACT+CGG + chr4_2:72413508-72413527 None:intergenic 30.0%
TAACATTTGGGAGGAAATTA+AGG + chr4_2:72413752-72413771 None:intergenic 30.0%
! AGATGTACGCTTTTCAAATT+AGG + chr4_2:72413894-72413913 None:intergenic 30.0%
!! ATTACCCAATTTGGGTTTTT+CGG - chr4_2:72414008-72414027 Msa0620670:CDS 30.0%
! ATTTTGCACCACAGTTAAAA+AGG + chr4_2:72414037-72414056 None:intergenic 30.0%
! CTTCAACAAGTTGAATTAAC+TGG - chr4_2:72414215-72414234 Msa0620670:CDS 30.0%
AGTTGAATTAACTGGACTTA+AGG - chr4_2:72414223-72414242 Msa0620670:CDS 30.0%
GTTGAATTAACTGGACTTAA+GGG - chr4_2:72414224-72414243 Msa0620670:CDS 30.0%
CTTGTTAAAGTTAATCTCAG+TGG - chr4_2:72414296-72414315 Msa0620670:CDS 30.0%
TTAATCTCACATGGCAATTT+AGG - chr4_2:72414717-72414736 Msa0620670:intron 30.0%
!!! GTTTTTTGGTCCATTAACTT+TGG - chr4_2:72414782-72414801 Msa0620670:intron 30.0%
! TTTTTGCAGATTCCTTTGAT+TGG - chr4_2:72414869-72414888 Msa0620670:intron 30.0%
CAAAACAGAATTCCAATCAA+AGG + chr4_2:72414884-72414903 None:intergenic 30.0%
! CTTTGATTGGAATTCTGTTT+TGG - chr4_2:72414882-72414901 Msa0620670:intron 30.0%
! GTTAGGAATCTTTGTTACTT+TGG - chr4_2:72414974-72414993 Msa0620670:intron 30.0%
ACTGTAAAAACATAGACAGA+GGG + chr4_2:72415058-72415077 None:intergenic 30.0%
AACTGTAAAAACATAGACAG+AGG + chr4_2:72415059-72415078 None:intergenic 30.0%
! TTTTACAGTTATCTGTACCA+CGG - chr4_2:72415069-72415088 Msa0620670:intron 30.0%
AAAAATGAAGGGAAAAGGGA+AGG + chr4_2:72411921-72411940 None:intergenic 35.0%
AGATTGAGAGAGAGAAAAAG+AGG + chr4_2:72412060-72412079 None:intergenic 35.0%
AGCAAAGAAGAAGAAGAAGA+CGG + chr4_2:72412123-72412142 None:intergenic 35.0%
!!! CTTTTTTTGCACTCTTTGGA+GGG - chr4_2:72412144-72412163 Msa0620670:three_prime_UTR 35.0%
CAACCAAAAATAGTAGCATG+CGG - chr4_2:72412282-72412301 Msa0620670:three_prime_UTR 35.0%
ATGTGGTATGGATAATCATG+TGG - chr4_2:72412426-72412445 Msa0620670:three_prime_UTR 35.0%
TGGATAATCATGTGGTTAAG+TGG - chr4_2:72412434-72412453 Msa0620670:three_prime_UTR 35.0%
AACGATTGTGCAAAATCATC+AGG + chr4_2:72412769-72412788 None:intergenic 35.0%
! AGGAAGAAATTTGCTTCCTT+GGG + chr4_2:72412838-72412857 None:intergenic 35.0%
GATAGTAGACATCAACTTGA+GGG + chr4_2:72412870-72412889 None:intergenic 35.0%
!! AGTGTTCCATTTGTTTTCGA+TGG - chr4_2:72412913-72412932 Msa0620670:CDS 35.0%
CATTCTCCATCGAAAACAAA+TGG + chr4_2:72412922-72412941 None:intergenic 35.0%
!! CATTTGTTTTCGATGGAGAA+TGG - chr4_2:72412920-72412939 Msa0620670:CDS 35.0%
! ACCTTCTAAAGATCTCAAAG+AGG + chr4_2:72412993-72413012 None:intergenic 35.0%
TTTATTCTCGTCATTTGAGG+AGG + chr4_2:72413118-72413137 None:intergenic 35.0%
AATAGCAGCAAGTCTAACAT+CGG + chr4_2:72413211-72413230 None:intergenic 35.0%
ATCCATTAGCGATCTCAATA+AGG + chr4_2:72413395-72413414 None:intergenic 35.0%
AATGATAACTCGGTCAGATT+CGG + chr4_2:72413498-72413517 None:intergenic 35.0%
AAAGTTCTGCCCAAATCTTA+AGG - chr4_2:72413563-72413582 Msa0620670:CDS 35.0%
GAGGAAATTAAGGACAAGAT+CGG + chr4_2:72413742-72413761 None:intergenic 35.0%
ATCACTTGAAAGCCTACAAT+TGG - chr4_2:72413971-72413990 Msa0620670:CDS 35.0%
TAACTGTGGTGCAAAATTGA+AGG - chr4_2:72414040-72414059 Msa0620670:CDS 35.0%
AATGAACGAAGTGATTCACA+AGG + chr4_2:72414128-72414147 None:intergenic 35.0%
!! ATTCAACTTGTTGAAGCTGA+GGG + chr4_2:72414211-72414230 None:intergenic 35.0%
!! AATTCAACTTGTTGAAGCTG+AGG + chr4_2:72414212-72414231 None:intergenic 35.0%
CATCAAGATCACAAAGCAAT+TGG + chr4_2:72414451-72414470 None:intergenic 35.0%
!! TTACCCGCTTTGAGAAAATT+GGG - chr4_2:72414581-72414600 Msa0620670:intron 35.0%
CTGGATATTTAGTCCCAAAA+GGG + chr4_2:72414612-72414631 None:intergenic 35.0%
! AGATGCTTGTTGAACATCTT+TGG - chr4_2:72414663-72414682 Msa0620670:intron 35.0%
TAAATCTTGCAGTTCAGGAA+AGG + chr4_2:72414700-72414719 None:intergenic 35.0%
GAGATTAAATCTTGCAGTTC+AGG + chr4_2:72414705-72414724 None:intergenic 35.0%
CTGCAAGATTTAATCTCACA+TGG - chr4_2:72414708-72414727 Msa0620670:intron 35.0%
!!! TACACGGCATAGTAGTTTTT+TGG - chr4_2:72414768-72414787 Msa0620670:intron 35.0%
TGATCAAGACCCAAAGTTAA+TGG + chr4_2:72414795-72414814 None:intergenic 35.0%
! TGTGGTTGCTTCCTTTTAAA+TGG - chr4_2:72414914-72414933 Msa0620670:intron 35.0%
GAGATATGCAGCCATTTAAA+AGG + chr4_2:72414928-72414947 None:intergenic 35.0%
!! GAATCTTTGTTACTTTGGGT+TGG - chr4_2:72414979-72414998 Msa0620670:intron 35.0%
!!! TTTTTAGCTCGGCTTTGTAT+CGG - chr4_2:72415011-72415030 Msa0620670:intron 35.0%
!!! CATAGGTGTTTTGACTCAAA+CGG - chr4_2:72415096-72415115 Msa0620670:intron 35.0%
!!! TTATGAAGCCTTGTTTTCGA+GGG - chr4_2:72415172-72415191 Msa0620670:five_prime_UTR 35.0%
! CCATGACAATCTTTTTCCAT+CGG - chr4_2:72415227-72415246 Msa0620670:five_prime_UTR 35.0%
! CATGACAATCTTTTTCCATC+GGG - chr4_2:72415228-72415247 Msa0620670:five_prime_UTR 35.0%
AAAAAAACAACCTTTCCCGA+TGG + chr4_2:72415246-72415265 None:intergenic 35.0%
ACGGATTCCCATACAATGAA+TGG + chr4_2:72411872-72411891 None:intergenic 40.0%
TGTAAGAGACAAGTGGGAAA+CGG + chr4_2:72411891-72411910 None:intergenic 40.0%
!!! GCTGCTTTTTTTGCACTCTT+TGG - chr4_2:72412140-72412159 Msa0620670:three_prime_UTR 40.0%
!!! GCTTTTTTTGCACTCTTTGG+AGG - chr4_2:72412143-72412162 Msa0620670:three_prime_UTR 40.0%
! GAACCGCATGCTACTATTTT+TGG + chr4_2:72412288-72412307 None:intergenic 40.0%
GCACAATCGTTTATGTTCTC+AGG - chr4_2:72412778-72412797 Msa0620670:CDS 40.0%
! TCAGGTGATAACTTTTGCCA+TGG - chr4_2:72412796-72412815 Msa0620670:CDS 40.0%
! GTGATAACTTTTGCCATGGT+GGG - chr4_2:72412800-72412819 Msa0620670:CDS 40.0%
! GGAAGAAATTTGCTTCCTTG+GGG + chr4_2:72412837-72412856 None:intergenic 40.0%
! CAGGAAGAAATTTGCTTCCT+TGG + chr4_2:72412839-72412858 None:intergenic 40.0%
GCAAATTTCTTCCTGTCTCT+TGG - chr4_2:72412844-72412863 Msa0620670:CDS 40.0%
GGATAGTAGACATCAACTTG+AGG + chr4_2:72412871-72412890 None:intergenic 40.0%
!! GCCTCTTTGAGATCTTTAGA+AGG - chr4_2:72412989-72413008 Msa0620670:CDS 40.0%
! ATCTTTAGAAGGTTGCCTGT+TGG - chr4_2:72413000-72413019 Msa0620670:CDS 40.0%
!!! CATTTGAGGAGGTACTTTTG+TGG + chr4_2:72413107-72413126 None:intergenic 40.0%
GAAAGTGACTGTGAAGAGTT+TGG - chr4_2:72413141-72413160 Msa0620670:CDS 40.0%
!! GTTTCTTCTGTTGGTGATGA+AGG - chr4_2:72413369-72413388 Msa0620670:CDS 40.0%
! AAATTGCAGGGCATTTGCAA+AGG + chr4_2:72413440-72413459 None:intergenic 40.0%
AATGAAGGTCTACAAGCCAT+TGG - chr4_2:72413540-72413559 Msa0620670:CDS 40.0%
ATTTGGGCAGAACTTTCCAA+TGG + chr4_2:72413559-72413578 None:intergenic 40.0%
ATATCTATCAAGGACTGTGC+CGG - chr4_2:72413588-72413607 Msa0620670:CDS 40.0%
CCAAAGAAGTCGAAGAAAAC+AGG + chr4_2:72413638-72413657 None:intergenic 40.0%
! CCTGTTTTCTTCGACTTCTT+TGG - chr4_2:72413635-72413654 Msa0620670:CDS 40.0%
!! GACTTCTTTGGTTCTGACAA+AGG - chr4_2:72413647-72413666 Msa0620670:CDS 40.0%
AGCTAGAGAGAGATCAGAAA+CGG + chr4_2:72413691-72413710 None:intergenic 40.0%
GATCTCTCTCTAGCTGTTAT+TGG - chr4_2:72413696-72413715 Msa0620670:CDS 40.0%
CTAGCTGTTATTGGACACTA+TGG - chr4_2:72413705-72413724 Msa0620670:CDS 40.0%
AGCCTCTCTCACTAACATTT+GGG + chr4_2:72413764-72413783 None:intergenic 40.0%
AAGCCTCTCTCACTAACATT+TGG + chr4_2:72413765-72413784 None:intergenic 40.0%
TGGGTTATGGGAAATGCTAA+TGG - chr4_2:72413786-72413805 Msa0620670:CDS 40.0%
AACAGCTTCAATCCCAACAT+CGG + chr4_2:72413859-72413878 None:intergenic 40.0%
TGTGCATTTCTCTCAGACAA+CGG - chr4_2:72413921-72413940 Msa0620670:CDS 40.0%
! CGGATTGATTTCATTCACCA+AGG - chr4_2:72413941-72413960 Msa0620670:CDS 40.0%
TTCAAGTGATATAGCAGCCT+TGG + chr4_2:72413961-72413980 None:intergenic 40.0%
TGCCACAGAATTACCCAATT+TGG - chr4_2:72413999-72414018 Msa0620670:CDS 40.0%
GCCACAGAATTACCCAATTT+GGG - chr4_2:72414000-72414019 Msa0620670:CDS 40.0%
ACCCAAATTGGGTAATTCTG+TGG + chr4_2:72414004-72414023 None:intergenic 40.0%
! TTTTCTATGGTGAGCTGCTT+TGG - chr4_2:72414065-72414084 Msa0620670:CDS 40.0%
! TTTCTATGGTGAGCTGCTTT+GGG - chr4_2:72414066-72414085 Msa0620670:CDS 40.0%
AGTGATTCACAAGGAGATAC+AGG + chr4_2:72414119-72414138 None:intergenic 40.0%
CAACTTTCCGAGTACAGAAA+GGG + chr4_2:72414186-72414205 None:intergenic 40.0%
ACAACTTTCCGAGTACAGAA+AGG + chr4_2:72414187-72414206 None:intergenic 40.0%
AACTTTAACAAGACCAGCCT+CGG + chr4_2:72414288-72414307 None:intergenic 40.0%
CAGGGATGAAACTACTTTGT+CGG + chr4_2:72414336-72414355 None:intergenic 40.0%
CTCGAAATTCTGAACCTTGA+AGG - chr4_2:72414377-72414396 Msa0620670:CDS 40.0%
CTACAGATTCTTTCTCTGTC+AGG - chr4_2:72414533-72414552 Msa0620670:intron 40.0%
!! CTTACCCGCTTTGAGAAAAT+TGG - chr4_2:72414580-72414599 Msa0620670:intron 40.0%
TATTTAGTCCCAAAAGGGTG+TGG + chr4_2:72414607-72414626 None:intergenic 40.0%
GCTGGATATTTAGTCCCAAA+AGG + chr4_2:72414613-72414632 None:intergenic 40.0%
! TGCTGATTGAATTGCAATGC+TGG + chr4_2:72414631-72414650 None:intergenic 40.0%
! TGCTTGTTGAACATCTTTGG+AGG - chr4_2:72414666-72414685 Msa0620670:intron 40.0%
CATGCAGAAGTCTAGTTACA+CGG - chr4_2:72414752-72414771 Msa0620670:intron 40.0%
GGTTAAATGACTGCATACTC+CGG + chr4_2:72414844-72414863 None:intergenic 40.0%
AAAGGAAGCAACCACATACA+TGG + chr4_2:72414910-72414929 None:intergenic 40.0%
! ATCTCTGAGAACACATCTAC+CGG - chr4_2:72414943-72414962 Msa0620670:intron 40.0%
AAAGCCGAGCTAAAAACATC+AGG + chr4_2:72415007-72415026 None:intergenic 40.0%
CAGAGGGAACTAAGAAATTG+TGG + chr4_2:72415042-72415061 None:intergenic 40.0%
CGTTTGAGTCAAAACACCTA+TGG + chr4_2:72415098-72415117 None:intergenic 40.0%
! TTTGACTCAAACGGAGGTAT+CGG - chr4_2:72415105-72415124 Msa0620670:intron 40.0%
TCGGTATTAGTGCTCTTGTT+AGG - chr4_2:72415124-72415143 Msa0620670:exon 40.0%
CGGTATTAGTGCTCTTGTTA+GGG - chr4_2:72415125-72415144 Msa0620670:exon 40.0%
!!! GTTATGAAGCCTTGTTTTCG+AGG - chr4_2:72415171-72415190 Msa0620670:five_prime_UTR 40.0%
CCGATGGAAAAAGATTGTCA+TGG + chr4_2:72415230-72415249 None:intergenic 40.0%
! CAATCTTTTTCCATCGGGAA+AGG - chr4_2:72415233-72415252 Msa0620670:five_prime_UTR 40.0%
CCTTAAAAAAAACTAGGGCC+TGG + chr4_2:72415272-72415291 None:intergenic 40.0%
!!! CCAGGCCCTAGTTTTTTTTA+AGG - chr4_2:72415269-72415288 Msa0620670:five_prime_UTR 40.0%
ATCTGCCCTTTGTGTTTGTA+TGG - chr4_2:72415349-72415368 Msa0620670:five_prime_UTR 40.0%
AAGCCGAAGACTTGAGACAT+GGG + chr4_2:72412184-72412203 None:intergenic 45.0%
AAAGCCGAAGACTTGAGACA+TGG + chr4_2:72412185-72412204 None:intergenic 45.0%
! TCTCAAGTCTTCGGCTTTTC+TGG - chr4_2:72412187-72412206 Msa0620670:three_prime_UTR 45.0%
! GGTGATAACTTTTGCCATGG+TGG - chr4_2:72412799-72412818 Msa0620670:CDS 45.0%
GGTTTGTGTATAACCCACCA+TGG + chr4_2:72412816-72412835 None:intergenic 45.0%
TGGGTTATACACAAACCCCA+AGG - chr4_2:72412819-72412838 Msa0620670:CDS 45.0%
!! ATCTCAAAGAGGCACTCATC+TGG + chr4_2:72412982-72413001 None:intergenic 45.0%
AGTGACTGTGAAGAGTTTGG+AGG - chr4_2:72413144-72413163 Msa0620670:CDS 45.0%
TGTGAAGAGTTTGGAGGTGA+GGG - chr4_2:72413150-72413169 Msa0620670:CDS 45.0%
CTTCTTTCCTTCCAAGCTTC+GGG + chr4_2:72413184-72413203 None:intergenic 45.0%
CCTTCTTTCCTTCCAAGCTT+CGG + chr4_2:72413185-72413204 None:intergenic 45.0%
!! AGACTTGCTGCTATTGCAGT+TGG - chr4_2:72413216-72413235 Msa0620670:CDS 45.0%
!! GGCCTTATTGAGATCGCTAA+TGG - chr4_2:72413390-72413409 Msa0620670:CDS 45.0%
! AAGCCTTGTCGGAAATTGCA+GGG + chr4_2:72413452-72413471 None:intergenic 45.0%
! AAAGCCTTGTCGGAAATTGC+AGG + chr4_2:72413453-72413472 None:intergenic 45.0%
! AACTGCGGTTAAAGCCTTGT+CGG + chr4_2:72413463-72413482 None:intergenic 45.0%
TGTCCTAGCATTCGCAATGA+AGG - chr4_2:72413525-72413544 Msa0620670:CDS 45.0%
AGACCTTCATTGCGAATGCT+AGG + chr4_2:72413531-72413550 None:intergenic 45.0%
AAAGGTGAAGCTTCAAGCAC+TGG - chr4_2:72413665-72413684 Msa0620670:CDS 45.0%
CTCTCTCACTAACATTTGGG+AGG + chr4_2:72413761-72413780 None:intergenic 45.0%
CTCCCAAATGTTAGTGAGAG+AGG - chr4_2:72413759-72413778 Msa0620670:CDS 45.0%
ATGTTAGTGAGAGAGGCTTC+TGG - chr4_2:72413766-72413785 Msa0620670:CDS 45.0%
TGTTAGTGAGAGAGGCTTCT+GGG - chr4_2:72413767-72413786 Msa0620670:CDS 45.0%
GATGTTGGGATTGAAGCTGT+TGG - chr4_2:72413858-72413877 Msa0620670:CDS 45.0%
TGGGATTGAAGCTGTTGGAA+AGG - chr4_2:72413863-72413882 Msa0620670:CDS 45.0%
GGGATTGAAGCTGTTGGAAA+GGG - chr4_2:72413864-72413883 Msa0620670:CDS 45.0%
TGTGGCACTCTTCCAATTGT+AGG + chr4_2:72413986-72414005 None:intergenic 45.0%
GACGCCGAAAAACCCAAATT+GGG + chr4_2:72414015-72414034 None:intergenic 45.0%
!! TTCGGCGTCCTTTTTAACTG+TGG - chr4_2:72414026-72414045 Msa0620670:CDS 45.0%
TTATCGATCTGTAACTGCCC+TGG - chr4_2:72414146-72414165 Msa0620670:CDS 45.0%
ATCTGTAACTGCCCTGGATT+TGG - chr4_2:72414152-72414171 Msa0620670:CDS 45.0%
AACGCTACCCTTTCTGTACT+CGG - chr4_2:72414176-72414195 Msa0620670:CDS 45.0%
TTAAGGGAGTCACAGATGCT+GGG - chr4_2:72414240-72414259 Msa0620670:CDS 45.0%
CGACAAAGTAGTTTCATCCC+TGG - chr4_2:72414334-72414353 Msa0620670:CDS 45.0%
! TATCTGTTTTGCGTGTGCCA+GGG + chr4_2:72414510-72414529 None:intergenic 45.0%
! TTATCTGTTTTGCGTGTGCC+AGG + chr4_2:72414511-72414530 None:intergenic 45.0%
! TGGCCCAATTTTCTCAAAGC+GGG + chr4_2:72414587-72414606 None:intergenic 45.0%
! GTGGCCCAATTTTCTCAAAG+CGG + chr4_2:72414588-72414607 None:intergenic 45.0%
! AAAATTGGGCCACACCCTTT+TGG - chr4_2:72414595-72414614 Msa0620670:intron 45.0%
! AAATTGGGCCACACCCTTTT+GGG - chr4_2:72414596-72414615 Msa0620670:intron 45.0%
TTGATCATCATCCAGCGACT+CGG - chr4_2:72414808-72414827 Msa0620670:intron 45.0%
GACTGCATACTCCGGAAAAA+GGG + chr4_2:72414836-72414855 None:intergenic 45.0%
TGACTGCATACTCCGGAAAA+AGG + chr4_2:72414837-72414856 None:intergenic 45.0%
!!! CTGTTTTGGCACCATGTATG+TGG - chr4_2:72414896-72414915 Msa0620670:intron 45.0%
! TCTCTGAGAACACATCTACC+GGG - chr4_2:72414944-72414963 Msa0620670:intron 45.0%
AGATTCCTAACTCCAGAACC+CGG + chr4_2:72414965-72414984 None:intergenic 45.0%
!!! GGCACCTGATGTTTTTAGCT+CGG - chr4_2:72415000-72415019 Msa0620670:intron 45.0%
!!! AGGTGTTTTGACTCAAACGG+AGG - chr4_2:72415099-72415118 Msa0620670:intron 45.0%
TTAGGGTTGTTGCAGTTGTC+TGG - chr4_2:72415142-72415161 Msa0620670:five_prime_UTR 45.0%
! ACATGTATAACTTGCCGCCA+CGG + chr4_2:72415204-72415223 None:intergenic 45.0%
!!! TATTTTTTATGAAATAATTA+TGG - chr4_2:72412376-72412395 Msa0620670:three_prime_UTR 5.0%
!!! ATTTTTTATGAAATAATTAT+GGG - chr4_2:72412377-72412396 Msa0620670:three_prime_UTR 5.0%
GCACCCATGTCTCAAGTCTT+CGG - chr4_2:72412178-72412197 Msa0620670:three_prime_UTR 50.0%
! ACACGTGATCTCTTCTGAGG+TGG + chr4_2:72412892-72412911 None:intergenic 50.0%
CTGACACGTGATCTCTTCTG+AGG + chr4_2:72412895-72412914 None:intergenic 50.0%
! GGTTGCCTGTTGGTGAAGAA+AGG - chr4_2:72413010-72413029 Msa0620670:CDS 50.0%
GCACTCCTTTCTTCACCAAC+AGG + chr4_2:72413018-72413037 None:intergenic 50.0%
CTGCTTGTGTTTCCAAACGC+TGG - chr4_2:72413040-72413059 Msa0620670:CDS 50.0%
! CAGAAGCATAAGCCAGCGTT+TGG + chr4_2:72413055-72413074 None:intergenic 50.0%
CTGTGAAGAGTTTGGAGGTG+AGG - chr4_2:72413149-72413168 Msa0620670:CDS 50.0%
TACCTTTCCCGAAGCTTGGA+AGG - chr4_2:72413174-72413193 Msa0620670:CDS 50.0%
TTCCTTCCAAGCTTCGGGAA+AGG + chr4_2:72413179-72413198 None:intergenic 50.0%
CCGAAGCTTGGAAGGAAAGA+AGG - chr4_2:72413182-72413201 Msa0620670:CDS 50.0%
ACTGCATCACGAGGAGGATT+AGG - chr4_2:72413240-72413259 Msa0620670:CDS 50.0%
CTGCATCACGAGGAGGATTA+GGG - chr4_2:72413241-72413260 Msa0620670:CDS 50.0%
TTAGGGAAGCTTGCAATCCG+TGG - chr4_2:72413258-72413277 Msa0620670:CDS 50.0%
GGTCTCAAAGCAGTTGCTAG+TGG - chr4_2:72413312-72413331 Msa0620670:CDS 50.0%
ATGCCCTGCAATTTCCGACA+AGG - chr4_2:72413446-72413465 Msa0620670:CDS 50.0%
CGGACACTTCTTTGCAACTG+CGG + chr4_2:72413478-72413497 None:intergenic 50.0%
GATTCCTTGATCCCCAACAC+CGG + chr4_2:72413610-72413629 None:intergenic 50.0%
TGAGAGAGGCTTCTGGGTTA+TGG - chr4_2:72413773-72413792 Msa0620670:CDS 50.0%
GAGAGAGGCTTCTGGGTTAT+GGG - chr4_2:72413774-72413793 Msa0620670:CDS 50.0%
CTCACAATTGCATCCTGCAG+AGG - chr4_2:72413828-72413847 Msa0620670:CDS 50.0%
! AACATCGGTTACTCCTCTGC+AGG + chr4_2:72413844-72413863 None:intergenic 50.0%
TGCAGAGGAGTAACCGATGT+TGG - chr4_2:72413843-72413862 Msa0620670:CDS 50.0%
GCAGAGGAGTAACCGATGTT+GGG - chr4_2:72413844-72413863 Msa0620670:CDS 50.0%
GGACGCCGAAAAACCCAAAT+TGG + chr4_2:72414016-72414035 None:intergenic 50.0%
!! CTGCTTTGGGATCAAGGATC+TGG - chr4_2:72414079-72414098 Msa0620670:CDS 50.0%
TGGGATCAAGGATCTGGACT+TGG - chr4_2:72414085-72414104 Msa0620670:CDS 50.0%
CTTAAGGGAGTCACAGATGC+TGG - chr4_2:72414239-72414258 Msa0620670:CDS 50.0%
TCATCCCTGGTCAATCTGCA+TGG - chr4_2:72414347-72414366 Msa0620670:CDS 50.0%
CCAACCATGCAGATTGACCA+GGG + chr4_2:72414354-72414373 None:intergenic 50.0%
TCCAACCATGCAGATTGACC+AGG + chr4_2:72414355-72414374 None:intergenic 50.0%
TTGTGTGCGATCTCCGATTC+CGG - chr4_2:72414476-72414495 Msa0620670:CDS 50.0%
TTCTCTGTCAGGCTGCACTT+TGG - chr4_2:72414544-72414563 Msa0620670:intron 50.0%
GTCAGGCTGCACTTTGGTTA+CGG - chr4_2:72414550-72414569 Msa0620670:intron 50.0%
TGATCATCATCCAGCGACTC+GGG - chr4_2:72414809-72414828 Msa0620670:intron 50.0%
AGAACACATCTACCGGGTTC+TGG - chr4_2:72414950-72414969 Msa0620670:intron 50.0%
!! ATCTACCGGGTTCTGGAGTT+AGG - chr4_2:72414957-72414976 Msa0620670:intron 50.0%
ATCTGTACCACGGTGTCCAT+AGG - chr4_2:72415079-72415098 Msa0620670:intron 50.0%
CAAAACACCTATGGACACCG+TGG + chr4_2:72415089-72415108 None:intergenic 50.0%
CAACTTGAGGGCCAAGAGAC+AGG + chr4_2:72412858-72412877 None:intergenic 55.0%
GGGATACCTTTCCCGAAGCT+TGG - chr4_2:72413170-72413189 Msa0620670:CDS 55.0%
GCAGTTGGAACTGCATCACG+AGG - chr4_2:72413231-72413250 Msa0620670:CDS 55.0%
GTTGGAACTGCATCACGAGG+AGG - chr4_2:72413234-72413253 Msa0620670:CDS 55.0%
! CGCGTTCTGAGTTGCTTCCA+CGG + chr4_2:72413278-72413297 None:intergenic 55.0%
CGTGGAAGCAACTCAGAACG+CGG - chr4_2:72413276-72413295 Msa0620670:CDS 55.0%
! ATCAAGGACTGTGCCGGTGT+TGG - chr4_2:72413594-72413613 Msa0620670:CDS 55.0%
! TCAAGGACTGTGCCGGTGTT+GGG - chr4_2:72413595-72413614 Msa0620670:CDS 55.0%
GTTGGGGATCAAGGAATCGC+TGG - chr4_2:72413612-72413631 Msa0620670:CDS 55.0%
!! GGTGAGCTGCTTTGGGATCA+AGG - chr4_2:72414073-72414092 Msa0620670:CDS 55.0%
GGGTAGCGTTGCCAAATCCA+GGG + chr4_2:72414166-72414185 None:intergenic 55.0%
AGGGTAGCGTTGCCAAATCC+AGG + chr4_2:72414167-72414186 None:intergenic 55.0%
TCCATTGCTTGAGAGCTCCG+AGG - chr4_2:72414268-72414287 Msa0620670:CDS 55.0%
CCCTGGTCAATCTGCATGGT+TGG - chr4_2:72414351-72414370 Msa0620670:CDS 55.0%
GGAATCGGAGATCGCACACA+AGG + chr4_2:72414477-72414496 None:intergenic 55.0%
TGTGTGCGATCTCCGATTCC+GGG - chr4_2:72414477-72414496 Msa0620670:CDS 55.0%
GCTGCACTTTGGTTACGGAC+AGG - chr4_2:72414555-72414574 Msa0620670:intron 55.0%
!!! AGCCTTGTTTTCGAGGGCCT+TGG - chr4_2:72415178-72415197 Msa0620670:five_prime_UTR 55.0%
GAACGCGGCGTGACAACTCT+AGG - chr4_2:72413291-72413310 Msa0620670:CDS 60.0%
! CAAGGACTGTGCCGGTGTTG+GGG - chr4_2:72413596-72413615 Msa0620670:CDS 60.0%
! TGTGCCGGTGTTGGGGATCA+AGG - chr4_2:72413603-72413622 Msa0620670:CDS 60.0%
GCCTCGGAGCTCTCAAGCAA+TGG + chr4_2:72414272-72414291 None:intergenic 60.0%
TTGCTTGAGAGCTCCGAGGC+TGG - chr4_2:72414272-72414291 Msa0620670:CDS 60.0%
CAGGGCTGCTATCCCGGAAT+CGG + chr4_2:72414492-72414511 None:intergenic 60.0%
GAAAAAGGGACCCGAGTCGC+TGG + chr4_2:72414822-72414841 None:intergenic 60.0%
!! GCGACTCGGGTCCCTTTTTC+CGG - chr4_2:72414822-72414841 Msa0620670:intron 60.0%
GGCCAAGGCCCTCGAAAACA+AGG + chr4_2:72415183-72415202 None:intergenic 60.0%
! ATAACTTGCCGCCACGGCCA+AGG + chr4_2:72415198-72415217 None:intergenic 60.0%
CGATTCCGGGATAGCAGCCC+TGG - chr4_2:72414490-72414509 Msa0620670:CDS 65.0%
GTGTGCCAGGGCTGCTATCC+CGG + chr4_2:72414498-72414517 None:intergenic 65.0%
!! GTTTTCGAGGGCCTTGGCCG+TGG - chr4_2:72415184-72415203 Msa0620670:five_prime_UTR 65.0%
TTCGAGGGCCTTGGCCGTGG+CGG - chr4_2:72415187-72415206 Msa0620670:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 72411836 72415481 72411836 ID=Msa0620670;Name=Msa0620670
chr4_2 mRNA 72411836 72415481 72411836 ID=Msa0620670-mRNA-1;Parent=Msa0620670;Name=Msa0620670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=348|1|1|1|0|0|2|775|643
chr4_2 exon 72411836 72414517 72411836 ID=Msa0620670-mRNA-1:exon:21546;Parent=Msa0620670-mRNA-1
chr4_2 exon 72415109 72415481 72415109 ID=Msa0620670-mRNA-1:exon:21545;Parent=Msa0620670-mRNA-1
chr4_2 five_prime_UTR 72415134 72415481 72415134 ID=Msa0620670-mRNA-1:five_prime_utr;Parent=Msa0620670-mRNA-1
chr4_2 CDS 72415109 72415133 72415109 ID=Msa0620670-mRNA-1:cds;Parent=Msa0620670-mRNA-1
chr4_2 CDS 72412611 72414517 72412611 ID=Msa0620670-mRNA-1:cds;Parent=Msa0620670-mRNA-1
chr4_2 three_prime_UTR 72411836 72412610 72411836 ID=Msa0620670-mRNA-1:three_prime_utr;Parent=Msa0620670-mRNA-1
Gene Sequence

>Msa0620670

ATGTCTCAAGTCTTCGGCTTTTCTGGTGATAACTTTTGCCATGGTGGGTTATACACAAACCCCAAGGAAGCAAATTTCTTCCTGTCTCTTGGCCCTCAAGTTGATGTCTACTATCCACCTCAGAAGAGATCACGTGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTTGAGCAGAAGCAGAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAAAGGAGTGCATCTGCTTGTGTTTCCAAACGCTGGCTTATGCTTCTGAGCAATATTTGCAAGAATGAAATCTGTAGCCACAAAAGTACCTCCTCAAATGACGAGAATAAAATGGAAAGTGACTGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGAAGCTTGGAAGGAAAGAAGGCAACCGATGTTAGACTTGCTGCTATTGCAGTTGGAACTGCATCACGAGGAGGATTAGGGAAGCTTGCAATCCGTGGAAGCAACTCAGAACGCGGCGTGACAACTCTAGGTCTCAAAGCAGTTGCTAGTGGATGTCCTTCTCTAAAGTCTTTCTCTTTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTTATTGAGATCGCTAATGGATGTCAAAAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCCGACAAGGCTTTAACCGCAGTTGCAAAGAAGTGTCCGAATCTGACCGAGTTATCATTAGAGTCTTGTCCTAGCATTCGCAATGAAGGTCTACAAGCCATTGGAAAGTTCTGCCCAAATCTTAAGGTTATATCTATCAAGGACTGTGCCGGTGTTGGGGATCAAGGAATCGCTGGCCTGTTTTCTTCGACTTCTTTGGTTCTGACAAAGGTGAAGCTTCAAGCACTGGCCGTTTCTGATCTCTCTCTAGCTGTTATTGGACACTATGGCAAAACAGTTACCGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGAGGCTTCTGGGTTATGGGAAATGCTAATGGATTGCATAAACTGAAGTCACTCACAATTGCATCCTGCAGAGGAGTAACCGATGTTGGGATTGAAGCTGTTGGAAAGGGCTGTCCTAATTTGAAAAGCGTACATCTTCATAAGTGTGCATTTCTCTCAGACAACGGATTGATTTCATTCACCAAGGCTGCTATATCACTTGAAAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTTTTTCTATGGTGAGCTGCTTTGGGATCAAGGATCTGGACTTGGAATTGTCACCTGTATCTCCTTGTGAATCACTTCGTTCATTATCGATCTGTAACTGCCCTGGATTTGGCAACGCTACCCTTTCTGTACTCGGAAAGTTGTGCCCTCAGCTTCAACAAGTTGAATTAACTGGACTTAAGGGAGTCACAGATGCTGGGTTGCTTCCATTGCTTGAGAGCTCCGAGGCTGGTCTTGTTAAAGTTAATCTCAGTGGTTGCATCAATCTTACCGACAAAGTAGTTTCATCCCTGGTCAATCTGCATGGTTGGACTCTCGAAATTCTGAACCTTGAAGGTTGTAAAAATATCAGCAATGCTAGCTTGATAGCAATTGCTGAGCATTGCCAATTGCTTTGTGATCTTGATGTTTCCTTGTGTGCGATCTCCGATTCCGGGATAGCAGCCCTGGCACACGCAAAACAGATAAATCTACAGATTCTTTCTCTGTCAGGCTGCACTTTGGTTACGGACAGGAGCTTACCCGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTAAATATCCAGCATTGCAATTCAATCAGCAGCAGCGCTGTTGAGATGCTTGTTGAACATCTTTGGAGGTGTGACATCCTTTCCTGA
Protein sequence

>Msa0620670

MSQVFGFSGDNFCHGGLYTNPKEANFFLSLGPQVDVYYPPQKRSRVSVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNICKNEICSHKSTSSNDENKMESDCEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLAIRGSNSERGVTTLGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALTAVAKKCPNLTELSLESCPSIRNEGLQAIGKFCPNLKVISIKDCAGVGDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNANGLHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKAFSMVSCFGIKDLDLELSPVSPCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCINLTDKVVSSLVNLHGWTLEILNLEGCKNISNASLIAIAEHCQLLCDLDVSLCAISDSGIAALAHAKQINLQILSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSAVEMLVEHLWRCDILS*