AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0006740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006740 MtrunA17_Chr1g0149351 97.356 643 17 0 1 643 1 643 0.0 1259
Msa0006740 MtrunA17_Chr3g0137771 66.202 645 210 4 1 642 1 640 0.0 836
Msa0006740 MtrunA17_Chr4g0063841 61.066 619 231 4 29 643 21 633 0.0 703
Msa0006740 MtrunA17_Chr4g0063861 57.949 390 163 1 254 643 2 390 6.88e-151 441
Msa0006740 MtrunA17_Chr4g0063861 23.399 406 254 10 180 557 6 382 1.10e-16 82.4
Msa0006740 MtrunA17_Chr4g0063851 63.014 146 49 1 35 180 30 170 5.58e-51 176
Msa0006740 MtrunA17_Chr2g0286991 27.258 598 370 17 68 633 11 575 1.39e-39 154
Msa0006740 MtrunA17_Chr2g0286991 27.536 414 260 11 145 558 205 578 4.97e-28 119
Msa0006740 MtrunA17_Chr2g0286991 28.409 264 180 4 145 408 334 588 5.73e-25 109
Msa0006740 MtrunA17_Chr4g0004901 29.505 505 294 21 129 606 162 631 3.21e-30 126
Msa0006740 MtrunA17_Chr4g0004901 28.529 340 205 9 175 513 366 668 7.00e-29 122
Msa0006740 MtrunA17_Chr4g0004901 26.048 334 213 11 321 628 124 449 5.64e-14 75.5
Msa0006740 MtrunA17_Chr7g0272131 29.478 441 274 13 191 606 186 614 1.76e-28 121
Msa0006740 MtrunA17_Chr7g0272131 26.898 461 274 14 205 611 92 543 1.56e-22 102
Msa0006740 MtrunA17_Chr7g0272131 28.745 247 171 4 176 422 350 591 1.74e-19 92.8
Msa0006740 MtrunA17_Chr7g0272131 24.272 412 252 12 180 544 277 675 6.02e-18 88.2
Msa0006740 MtrunA17_Chr7g0272131 27.273 264 179 6 174 433 399 653 1.29e-17 87.0
Msa0006740 MtrunA17_Chr1g0212071 27.128 376 258 8 66 436 18 382 7.00e-27 113
Msa0006740 MtrunA17_Chr1g0212071 28.968 252 171 4 142 391 145 390 5.18e-20 93.2
Msa0006740 MtrunA17_Chr1g0212071 25.625 320 206 8 252 569 93 382 9.61e-20 92.0
Msa0006740 MtrunA17_Chr1g0212071 25.143 350 195 7 202 518 95 410 2.45e-19 90.9
Msa0006740 MtrunA17_Chr1g0212071 29.050 179 124 3 455 632 110 286 3.28e-13 72.0
Msa0006740 MtrunA17_Chr8g0347711 28.184 369 234 7 63 417 10 361 1.88e-24 105
Msa0006740 MtrunA17_Chr8g0347711 28.000 300 185 8 360 635 75 367 7.02e-17 83.2
Msa0006740 MtrunA17_Chr4g0008501 22.991 448 296 14 166 588 145 568 3.87e-20 94.7
Msa0006740 MtrunA17_Chr3g0125671 29.474 190 107 2 210 399 123 285 5.43e-19 89.4
Msa0006740 MtrunA17_Chr3g0125671 34.066 91 60 0 174 264 192 282 7.29e-11 64.3
Msa0006740 MtrunA17_Chr1g0159531 26.577 222 124 3 204 413 105 299 5.44e-18 85.9
Msa0006740 MtrunA17_Chr1g0159531 27.751 209 140 2 180 377 107 315 1.68e-14 75.5
Msa0006740 MtrunA17_Chr1g0159531 26.866 201 108 3 143 307 128 325 8.49e-12 67.0
Msa0006740 MtrunA17_Chr1g0150971 25.666 413 237 15 188 582 339 699 9.07e-18 87.8
Msa0006740 MtrunA17_Chr1g0150971 25.042 595 270 22 180 630 377 939 4.44e-14 75.9
Msa0006740 MtrunA17_Chr4g0002671 23.451 597 353 17 65 609 3 547 9.54e-17 84.0
Msa0006740 MtrunA17_Chr1g0176031 22.830 311 176 5 228 533 92 343 9.17e-16 79.3
Msa0006740 MtrunA17_Chr1g0176031 27.907 301 196 12 336 634 58 339 8.79e-15 76.3
Msa0006740 MtrunA17_Chr1g0176031 29.208 202 137 5 174 374 120 316 1.48e-14 75.5
Msa0006740 MtrunA17_Chr1g0176031 25.820 244 169 7 319 558 79 314 2.01e-14 75.1
Msa0006740 MtrunA17_Chr1g0176031 24.275 276 195 6 191 457 81 351 9.94e-12 67.0
Msa0006740 MtrunA17_Chr5g0432971 22.660 406 264 9 216 609 199 566 1.36e-14 77.0
Msa0006740 MtrunA17_Chr4g0018891 25.843 356 200 13 202 555 189 482 6.29e-14 74.7
Msa0006740 MtrunA17_Chr1g0150991 25.657 495 281 20 162 633 158 588 7.62e-14 74.7
Msa0006740 MtrunA17_Chr5g0446541 22.081 471 298 15 176 609 145 583 9.28e-13 71.2
Msa0006740 MtrunA17_Chr4g0053361 24.070 457 281 16 66 506 44 450 2.48e-12 69.7
Msa0006740 MtrunA17_Chr4g0053361 24.691 405 232 14 224 620 116 455 3.52e-11 66.2
Msa0006740 MtrunA17_Chr1g0152951 23.729 295 199 9 201 484 137 416 5.07e-12 68.9
Msa0006740 MtrunA17_Chr3g0077831 22.571 350 217 10 202 541 192 497 1.06e-11 67.8
Msa0006740 MtrunA17_Chr4g0073771 30.168 179 109 6 229 405 102 266 1.44e-11 65.9
Msa0006740 MtrunA17_Chr4g0070541 25.090 279 195 8 346 618 397 667 1.61e-11 67.4
Msa0006740 MtrunA17_Chr1g0211631 24.066 241 151 4 174 412 296 506 1.63e-11 67.4
Msa0006740 MtrunA17_Chr4g0009861 28.169 142 80 1 172 291 165 306 7.51e-11 64.3
Msa0006740 MtrunA17_Chr3g0079141 24.419 430 270 19 68 485 64 450 7.94e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006740 AT2G25490.1 60.836 646 232 8 1 643 1 628 0.0 768
Msa0006740 AT5G25350.1 58.696 644 242 8 1 642 1 622 0.0 697
Msa0006740 AT4G15475.1 29.116 577 375 19 68 642 11 555 5.42e-46 172
Msa0006740 AT4G15475.1 26.471 340 241 4 125 460 252 586 4.51e-31 129
Msa0006740 AT4G15475.1 26.166 386 245 10 145 503 205 577 7.31e-26 113
Msa0006740 AT5G27920.1 26.177 531 331 16 152 631 82 602 5.78e-30 125
Msa0006740 AT5G27920.1 24.045 445 279 12 217 609 67 504 1.69e-19 93.2
Msa0006740 AT5G23340.1 26.780 295 185 4 306 599 85 349 2.54e-25 109
Msa0006740 AT5G23340.1 23.967 363 266 5 66 426 8 362 1.14e-22 101
Msa0006740 AT5G23340.1 25.281 356 220 8 175 521 84 402 6.60e-18 87.0
Msa0006740 AT5G01720.1 27.397 511 284 16 176 610 85 584 4.66e-23 104
Msa0006740 AT5G01720.1 26.882 372 207 10 129 500 274 580 5.42e-21 98.2
Msa0006740 AT5G01720.1 26.923 208 117 5 176 381 444 618 3.09e-14 76.6
Msa0006740 AT5G01720.1 27.301 326 227 9 307 632 61 376 1.62e-12 71.2
Msa0006740 AT1G21410.2 25.305 328 161 8 204 531 106 349 2.68e-19 90.5
Msa0006740 AT1G21410.2 31.214 173 114 5 464 634 102 271 4.00e-14 74.7
Msa0006740 AT1G21410.2 23.256 215 148 2 180 377 108 322 5.17e-13 71.2
Msa0006740 AT1G21410.1 25.305 328 161 8 204 531 106 349 2.68e-19 90.5
Msa0006740 AT1G21410.1 31.214 173 114 5 464 634 102 271 4.00e-14 74.7
Msa0006740 AT1G21410.1 23.256 215 148 2 180 377 108 322 5.17e-13 71.2
Msa0006740 AT1G77000.2 29.082 196 112 2 204 399 106 274 1.83e-18 88.2
Msa0006740 AT1G77000.2 25.641 234 140 4 180 379 108 341 8.11e-15 77.0
Msa0006740 AT1G77000.1 29.082 196 112 2 204 399 106 274 1.83e-18 88.2
Msa0006740 AT1G77000.1 25.641 234 140 4 180 379 108 341 8.11e-15 77.0
Msa0006740 AT4G33210.1 23.830 470 265 16 131 570 289 695 5.69e-17 85.9
Msa0006740 AT3G07550.1 24.090 357 259 6 62 413 12 361 4.99e-16 80.9
Msa0006740 AT3G07550.1 24.367 316 196 8 193 500 62 342 1.97e-12 70.1
Msa0006740 AT3G07550.1 28.094 299 169 9 348 641 118 375 1.02e-11 67.8
Msa0006740 AT3G07550.2 24.090 357 259 6 62 413 12 361 4.99e-16 80.9
Msa0006740 AT3G07550.2 24.367 316 196 8 193 500 62 342 1.97e-12 70.1
Msa0006740 AT3G07550.2 28.094 299 169 9 348 641 118 375 1.02e-11 67.8
Msa0006740 AT3G58530.1 25.095 263 155 9 180 439 128 351 3.10e-15 78.2
Msa0006740 AT3G58530.1 27.090 299 177 10 347 638 81 345 5.91e-15 77.4
Msa0006740 AT3G58530.1 21.283 343 207 6 193 530 58 342 8.82e-15 76.6
Msa0006740 AT3G07550.3 23.596 356 243 6 58 413 8 334 2.39e-14 75.5
Msa0006740 AT3G07550.3 24.042 287 182 7 215 500 64 315 5.07e-12 68.6
Msa0006740 AT3G07550.3 28.094 299 169 9 348 641 91 348 7.59e-12 67.8
Msa0006740 AT1G80630.1 23.383 402 235 9 200 569 148 508 4.17e-14 75.9
Msa0006740 AT1G55590.1 24.889 225 164 4 172 394 294 515 6.72e-14 75.5
Msa0006740 AT2G06040.1 24.911 281 200 6 337 610 473 749 1.59e-13 74.3
Msa0006740 AT1G47056.1 23.913 460 294 16 41 492 15 426 5.89e-13 72.0
Msa0006740 AT1G47056.1 28.082 292 142 8 347 581 130 410 2.30e-11 67.0
Msa0006740 AT4G07400.1 30.667 150 76 3 177 299 330 478 7.06e-13 72.0
Msa0006740 AT3G50080.1 24.222 450 259 16 57 500 33 406 1.00e-12 71.6
Msa0006740 AT1G77000.3 26.087 184 83 3 204 387 106 236 3.21e-12 67.8
Msa0006740 AT1G77000.4 26.087 184 83 3 204 387 106 236 3.21e-12 67.8
Msa0006740 AT2G17020.1 23.729 531 290 21 183 608 45 565 1.90e-11 67.8
Msa0006740 AT5G67250.1 25.000 308 209 11 201 500 119 412 8.07e-11 65.5

Find 205 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAAGTCTTTCTCTTTA+TGG 0.012962 1_1:-9741835 Msa0006740:CDS
TGCCACAGAATTACCCAATT+TGG 0.171018 1_1:-9741179 Msa0006740:CDS
CTTACCCGCTTTGAGAAAAT+TGG 0.171059 1_1:-9740598 Msa0006740:CDS
TTGGAAACCCTAATTGAAAT+AGG 0.191955 1_1:+9743171 None:intergenic
GATCTCTCTCTAGCTGTTAT+TGG 0.220084 1_1:-9741482 Msa0006740:CDS
TAACATTTGGGAGGAAATTA+AGG 0.226363 1_1:+9741429 None:intergenic
TGACTGCATACTCCGGAAAA+AGG 0.239112 1_1:+9740344 None:intergenic
TGTTATGAAATCGTGGAAAT+TGG 0.244856 1_1:+9743152 None:intergenic
ATAGATATAACCTTAAGATT+TGG 0.265371 1_1:+9741605 None:intergenic
TTAGGAATCTTTGTTACTTT+GGG 0.266239 1_1:-9740202 Msa0006740:three_prime_UTR
TCGGTATTAGTGCTCTTGTT+AGG 0.269533 1_1:-9740053 Msa0006740:three_prime_UTR
CTTCAACAAGTTGAATTAAC+TGG 0.274879 1_1:-9740963 Msa0006740:CDS
TGATCAAGACCCAAAGTTAA+TGG 0.275780 1_1:+9740386 None:intergenic
CCTTCTTTCCTTCCAAGCTT+CGG 0.280846 1_1:+9741996 None:intergenic
TGAGAGAGGCTTCTGGGTTA+TGG 0.281774 1_1:-9741405 Msa0006740:CDS
ATCTGTAACTGCCCTGGATT+TGG 0.285015 1_1:-9741026 Msa0006740:CDS
CAGGAAGAAATTTGCTTCCT+TGG 0.285276 1_1:+9742342 None:intergenic
TTGTGTGCGATCTCCGATTC+CGG 0.288491 1_1:-9740702 Msa0006740:CDS
AATATCAAAACAAATGCTTT+TGG 0.289474 1_1:+9739763 None:intergenic
CTTCTTTCCTTCCAAGCTTC+GGG 0.291790 1_1:+9741997 None:intergenic
CTCAAATGACGAGAATAAAA+TGG 0.294170 1_1:-9742059 Msa0006740:CDS
ACTGCATCACGAGGAGGATT+AGG 0.301726 1_1:-9741938 Msa0006740:CDS
TTAATCTCACACGGCAATTT+AGG 0.302140 1_1:-9740461 Msa0006740:three_prime_UTR
GAGATTAAATCTTGCAGTTC+AGG 0.305334 1_1:+9740476 None:intergenic
AAAATTGGGCCACACCCTTT+TGG 0.309297 1_1:-9740583 Msa0006740:CDS
GAGATATGCAGCCATTTAAA+AGG 0.313992 1_1:+9740252 None:intergenic
TTTCTATGGTAAGCTGCTTT+GGG 0.317243 1_1:-9741112 Msa0006740:CDS
TGTGGCACTCTTCCAATTGT+AGG 0.329715 1_1:+9741195 None:intergenic
TCAAGGACTGTGCCGGTGTT+GGG 0.330559 1_1:-9741583 Msa0006740:CDS
GTTAGGAATCTTTGTTACTT+TGG 0.334438 1_1:-9740203 Msa0006740:three_prime_UTR
AGATGCTTGTTGAACATCTT+TGG 0.338078 1_1:-9740515 Msa0006740:CDS
TAGATATAACCTTAAGATTT+GGG 0.344478 1_1:+9741606 None:intergenic
GCCACAGAATTACCCAATTT+GGG 0.348800 1_1:-9741178 Msa0006740:CDS
GTTGAATTAACTGGACTTAA+GGG 0.349439 1_1:-9740954 Msa0006740:CDS
AGGAAGAAATTTGCTTCCTT+GGG 0.350453 1_1:+9742343 None:intergenic
AGAACACAACTACCGGGTTC+TGG 0.350941 1_1:-9740227 Msa0006740:three_prime_UTR
GCAAATTTCTTCCTGTCTCT+TGG 0.351075 1_1:-9742334 Msa0006740:CDS
CTCGAAATTCTGAACCTTGA+AGG 0.357149 1_1:-9740801 Msa0006740:CDS
ATGTTAGTGAGAGAGGCTTC+TGG 0.357800 1_1:-9741412 Msa0006740:CDS
AAGCCTCTCTCACTAACATT+TGG 0.362156 1_1:+9741416 None:intergenic
AGTTGAATTAACTGGACTTA+AGG 0.362492 1_1:-9740955 Msa0006740:CDS
ATCTGCCCTTTGTGTTTGTA+TGG 0.364723 1_1:-9739826 Msa0006740:three_prime_UTR
GTTTCTTCTGTTGGTGATGA+AGG 0.367259 1_1:-9741809 Msa0006740:CDS
GATAGTGACTGTGAAGAGTT+TGG 0.369471 1_1:-9742037 Msa0006740:CDS
TTATGGAATGTTTCTTCTGT+TGG 0.375011 1_1:-9741818 Msa0006740:CDS
GAGAGAGGCTTCTGGGTTAT+GGG 0.375727 1_1:-9741404 Msa0006740:CDS
GCCTCTTTGAGATCTTTAGA+AGG 0.392355 1_1:-9742189 Msa0006740:CDS
TGGGTTATGGGAAATGCTAA+TGG 0.394159 1_1:-9741392 Msa0006740:CDS
TTAGGGTTGTTGCAGTTGTC+TGG 0.399270 1_1:-9740035 Msa0006740:three_prime_UTR
GTCAGGCTGCACTTTGGTTA+CGG 0.399322 1_1:-9740628 Msa0006740:CDS
CCCTGGTCAATCTGCATGGT+TGG 0.402559 1_1:-9740827 Msa0006740:CDS
ATCCATTAGCGATCTCAATA+AGG 0.403036 1_1:+9741786 None:intergenic
TGTGTGCGATCTCCGATTCC+GGG 0.408544 1_1:-9740701 Msa0006740:CDS
CGGTATTAGTGCTCTTGTTA+GGG 0.411071 1_1:-9740052 Msa0006740:three_prime_UTR
ATCACTTGAAAGCCTACAAT+TGG 0.412655 1_1:-9741207 Msa0006740:CDS
CCAAAGAAGTCGAAGAAAAC+AGG 0.414246 1_1:+9741543 None:intergenic
CTGCATCACGAGGAGGATTA+GGG 0.415640 1_1:-9741937 Msa0006740:CDS
TGGAAACCCTAATTGAAATA+GGG 0.415958 1_1:+9743172 None:intergenic
AGCCTCTCTCACTAACATTT+GGG 0.422860 1_1:+9741417 None:intergenic
GTGTGCCAGGGCTGCTATCC+CGG 0.423492 1_1:+9740683 None:intergenic
CTTAAGGGAGTCACAGATGC+TGG 0.425211 1_1:-9740939 Msa0006740:CDS
GGCCTTATTGAGATCGCTAA+TGG 0.425507 1_1:-9741788 Msa0006740:CDS
CATCAAGATCACAAAGCAAT+TGG 0.425806 1_1:+9740730 None:intergenic
ATCTCAAAGAGGCACTCATC+TGG 0.426649 1_1:+9742199 None:intergenic
AAAGTTCTGCCCAAATCTTA+AGG 0.427807 1_1:-9741615 Msa0006740:CDS
CTACAGATTCTTTCTCTGTC+AGG 0.430438 1_1:-9740645 Msa0006740:CDS
ATTTGATTTGTGAGTATTGA+AGG 0.431110 1_1:+9743086 None:intergenic
CGATTCCGGGATAGCAGCCC+TGG 0.432829 1_1:-9740688 Msa0006740:CDS
TGTTAGTGAGAGAGGCTTCT+GGG 0.434709 1_1:-9741411 Msa0006740:CDS
AGGGTAGCGTTGCCAAATCC+AGG 0.436782 1_1:+9741014 None:intergenic
TTAATGAACCATTCATTGTA+TGG 0.438116 1_1:-9743313 Msa0006740:five_prime_UTR
CATTCTCCATCGAAAACAAA+TGG 0.441047 1_1:+9742259 None:intergenic
AACTGCGATTAAAGCCTTGT+CGG 0.441499 1_1:+9741718 None:intergenic
TTACCCGCTTTGAGAAAATT+GGG 0.441746 1_1:-9740597 Msa0006740:CDS
AAAGCCTTGTCGGAAATTGC+AGG 0.442003 1_1:+9741728 None:intergenic
AACTACCGGGTTCTGGAGTT+AGG 0.442050 1_1:-9740220 Msa0006740:three_prime_UTR
TAACTGTGGTGCAAAATTGA+AGG 0.443191 1_1:-9741138 Msa0006740:CDS
CAGAAGCATAAGCCAGCGTT+TGG 0.444467 1_1:+9742126 None:intergenic
GAATCTTTGTTACTTTGGGT+TGG 0.446597 1_1:-9740198 Msa0006740:three_prime_UTR
CTGCTTTGGGATCAAGGATC+TGG 0.448619 1_1:-9741099 Msa0006740:CDS
GCACTCCTTTCTTCACCAAC+AGG 0.449873 1_1:+9742163 None:intergenic
GGTAAGCTGCTTTGGGATCA+AGG 0.450353 1_1:-9741105 Msa0006740:CDS
GCTGGATATTTAGTCCCAAA+AGG 0.450825 1_1:+9740568 None:intergenic
ATCAAGGACTGTGCCGGTGT+TGG 0.452196 1_1:-9741584 Msa0006740:CDS
ATCTGTACCACGGTGTCAAT+AGG 0.457103 1_1:-9740098 Msa0006740:three_prime_UTR
AACTTTAACAAGACCAGCCT+CGG 0.457238 1_1:+9740893 None:intergenic
CTAGCTGTTATTGGACACTA+TGG 0.460329 1_1:-9741473 Msa0006740:CDS
TTCAAGTGATATAGCAGCCT+TGG 0.460685 1_1:+9741220 None:intergenic
GGGATACCTTTCCCGAAGCT+TGG 0.461300 1_1:-9742008 Msa0006740:CDS
CAACTTGAGGGCCAAGAGAC+AGG 0.463141 1_1:+9742323 None:intergenic
TGTGCCGGTGTTGGGGATCA+AGG 0.466975 1_1:-9741575 Msa0006740:CDS
TTATCGATCTGTAACTGCCC+TGG 0.467205 1_1:-9741032 Msa0006740:CDS
CCGAAGCTTGGAAGGAAAGA+AGG 0.469354 1_1:-9741996 Msa0006740:CDS
CTCCCAAATGTTAGTGAGAG+AGG 0.473423 1_1:-9741419 Msa0006740:CDS
CGCGTTCTGAGTTGCTTCCA+CGG 0.473495 1_1:+9741903 None:intergenic
TTGCTTGAGAGCTCCGAGGC+TGG 0.476623 1_1:-9740906 Msa0006740:CDS
ATCTCTGAGAACACAACTAC+CGG 0.477432 1_1:-9740234 Msa0006740:three_prime_UTR
CTGCTTGTGTTTCCAAACGC+TGG 0.478903 1_1:-9742138 Msa0006740:CDS
TGGGATCAAGGATCTGGACT+TGG 0.479690 1_1:-9741093 Msa0006740:CDS
AGACTTGCTGCTATTGCAGT+TGG 0.480536 1_1:-9741962 Msa0006740:CDS
CAGGGCTGCTATCCCGGAAT+CGG 0.488751 1_1:+9740689 None:intergenic
GCAGAGGAGTAACCGATGTT+GGG 0.492742 1_1:-9741334 Msa0006740:CDS
AACGCTACCCTTTCTGTACT+CGG 0.496998 1_1:-9741002 Msa0006740:CDS
ACGGATTCCCATACAATGAA+TGG 0.499139 1_1:+9743305 None:intergenic
TTGATCATCATCCAGTGACT+CGG 0.499367 1_1:-9740370 Msa0006740:three_prime_UTR
TTCTCTGTCAGGCTGCACTT+TGG 0.500531 1_1:-9740634 Msa0006740:CDS
TGTAAGAGACAAGTGGGAAA+CGG 0.500705 1_1:+9743286 None:intergenic
GCACCCATGTCTCAAGTCTT+CGG 0.505219 1_1:-9743002 Msa0006740:exon
CAGGGATGAAACTACTTTGT+CGG 0.506121 1_1:+9740845 None:intergenic
TCTTAAGGTTATATCTATCA+AGG 0.507799 1_1:-9741600 Msa0006740:CDS
TGCAGAGGAGTAACCGATGT+TGG 0.509560 1_1:-9741335 Msa0006740:CDS
GCCTCGGAGCTCTCAAGCAA+TGG 0.512849 1_1:+9740909 None:intergenic
AGTGATTCACAATGAGATAC+AGG 0.513908 1_1:+9741062 None:intergenic
GGTTGCCTGTTGGTGAAGAA+AGG 0.514240 1_1:-9742168 Msa0006740:CDS
GACTTCTTTGGTTCTGACAA+AGG 0.516837 1_1:-9741531 Msa0006740:CDS
TGCTGATTGAATTGCAATGC+TGG 0.518629 1_1:+9740550 None:intergenic
AGACCTTCATTGCGAATGCT+AGG 0.519816 1_1:+9741650 None:intergenic
TGTCCTAGCATTCGCAATGA+AGG 0.520385 1_1:-9741653 Msa0006740:CDS
TAATGAACCATTCATTGTAT+GGG 0.522711 1_1:-9743312 Msa0006740:five_prime_UTR
GAACGCGGCGTGACAACTCT+AGG 0.525236 1_1:-9741887 Msa0006740:CDS
TACCTTTCCCGAAGCTTGGA+AGG 0.529475 1_1:-9742004 Msa0006740:CDS
CAAGGACTGTGCCGGTGTTG+GGG 0.530233 1_1:-9741582 Msa0006740:CDS
TGCTTGTTGAACATCTTTGG+AGG 0.531336 1_1:-9740512 Msa0006740:CDS
TTCCTTCCAAGCTTCGGGAA+AGG 0.533717 1_1:+9742002 None:intergenic
CTGGATATTTAGTCCCAAAA+GGG 0.534654 1_1:+9740569 None:intergenic
TCCAACCATGCAGATTGACC+AGG 0.536554 1_1:+9740826 None:intergenic
GGTCTCAAAGCAGTTGCTAG+TGG 0.537588 1_1:-9741866 Msa0006740:CDS
GGGATTGAAGCTGTGGGAAA+GGG 0.537959 1_1:-9741314 Msa0006740:CDS
GGCCAAGGCCCTCGAAAACA+AGG 0.538671 1_1:+9739997 None:intergenic
AACATCGGTTACTCCTCTGC+AGG 0.539479 1_1:+9741337 None:intergenic
AAAGGTGAAGCTTCAAGCAC+TGG 0.541994 1_1:-9741513 Msa0006740:CDS
AGCTAGAGAGAGATCAGAAA+CGG 0.542100 1_1:+9741490 None:intergenic
CAGAGGGAACTAAGAAATTG+TGG 0.543960 1_1:+9740138 None:intergenic
TTCGAGGGCCTTGGCCGTGG+CGG 0.544881 1_1:-9739990 Msa0006740:three_prime_UTR
TGGGATTGAAGCTGTGGGAA+AGG 0.545601 1_1:-9741315 Msa0006740:CDS
ATAACTTGCCGCCACGGCCA+AGG 0.549106 1_1:+9739982 None:intergenic
TCATCCCTGGTCAATCTGCA+TGG 0.552095 1_1:-9740831 Msa0006740:CDS
GTTGGGGATCAAGGAATCGC+TGG 0.553667 1_1:-9741566 Msa0006740:CDS
TAAATCTTGCAGTTCAGGAA+AGG 0.554597 1_1:+9740481 None:intergenic
TTTGACTCAAACAGAGGTAT+CGG 0.554604 1_1:-9740072 Msa0006740:three_prime_UTR
CTGTGAAGAGTTTGGAGGTG+AGG 0.561043 1_1:-9742029 Msa0006740:CDS
GATAGTAGACATCAACTTGA+GGG 0.562773 1_1:+9742311 None:intergenic
CGACAAAGTAGTTTCATCCC+TGG 0.562846 1_1:-9740844 Msa0006740:CDS
TGTGAAGAGTTTGGAGGTGA+GGG 0.567927 1_1:-9742028 Msa0006740:CDS
AATTCAACTTGTTGAAGCTG+AGG 0.567931 1_1:+9740969 None:intergenic
ATACACCATACAAACACAAA+GGG 0.569316 1_1:+9739821 None:intergenic
TTAGGGAAGCTTTCAATCCG+TGG 0.570647 1_1:-9741920 Msa0006740:CDS
GCTGCACTTTGGTTACGGAC+AGG 0.573743 1_1:-9740623 Msa0006740:CDS
ATATCTATCAAGGACTGTGC+CGG 0.574521 1_1:-9741590 Msa0006740:CDS
ACAACTTTCCGAGTACAGAA+AGG 0.575435 1_1:+9740994 None:intergenic
AAAGAGAAAGACTTTAGAGA+AGG 0.577504 1_1:+9741839 None:intergenic
CAACTTTCCGAGTACAGAAA+GGG 0.577567 1_1:+9740995 None:intergenic
ATTCAACTTGTTGAAGCTGA+GGG 0.582352 1_1:+9740970 None:intergenic
TTAAGGGAGTCACAGATGCT+GGG 0.582917 1_1:-9740938 Msa0006740:CDS
AAATTGCAGGGCATTTGCAA+AGG 0.585154 1_1:+9741741 None:intergenic
GAATTTGTGTTATGAAATCG+TGG 0.585664 1_1:+9743145 None:intergenic
ACATGTATAACTTGCCGCCA+CGG 0.587512 1_1:+9739976 None:intergenic
CTTGTTAAAGTTAATCTCAG+TGG 0.588339 1_1:-9740882 Msa0006740:CDS
CGATGTTGGGATTGAAGCTG+TGG 0.589444 1_1:-9741321 Msa0006740:CDS
CGGATTGATTTCATTCACCA+AGG 0.590158 1_1:-9741237 Msa0006740:CDS
AATGAAGGTCTACAAGCCAT+TGG 0.590793 1_1:-9741638 Msa0006740:CDS
GGTTAAATGACTGCATACTC+CGG 0.591159 1_1:+9740337 None:intergenic
TTTATTCTCGTCATTTGAGG+AGG 0.593111 1_1:+9742063 None:intergenic
TGATCATCATCCAGTGACTC+GGG 0.594984 1_1:-9740369 Msa0006740:three_prime_UTR
AAGCCTTGTCGGAAATTGCA+GGG 0.597068 1_1:+9741729 None:intergenic
ATTTGGGCAGAACTTTCCAA+TGG 0.599132 1_1:+9741622 None:intergenic
AAAGGCAGCAACCAAATACA+TGG 0.601427 1_1:+9740270 None:intergenic
TATTTAGTCCCAAAAGGGTG+TGG 0.603959 1_1:+9740574 None:intergenic
GAGGAAATTAAGGACAAGAT+CGG 0.606521 1_1:+9741439 None:intergenic
TGTGCATTTCTCTCAGACAA+CGG 0.609269 1_1:-9741257 Msa0006740:CDS
CTGCAAGATTTAATCTCACA+CGG 0.610841 1_1:-9740470 Msa0006740:three_prime_UTR
CATGCAGAAGTCTAGTTACA+CGG 0.612777 1_1:-9740426 Msa0006740:three_prime_UTR
CACAGCTTCAATCCCAACAT+CGG 0.616563 1_1:+9741322 None:intergenic
GGAAGAAATTTGCTTCCTTG+GGG 0.618210 1_1:+9742344 None:intergenic
CTCACAATTGCATCCTGCAG+AGG 0.621245 1_1:-9741350 Msa0006740:CDS
AATGATAACTCGGTCAGAGT+CGG 0.624354 1_1:+9741683 None:intergenic
ACCCAAATTGGGTAATTCTG+TGG 0.625237 1_1:+9741177 None:intergenic
ATCTTTAGAAGGTTGCCTGT+TGG 0.625556 1_1:-9742178 Msa0006740:CDS
GGATAGTAGACATCAACTTG+AGG 0.626268 1_1:+9742310 None:intergenic
ACACGTGATCTCTTCTGAGG+TGG 0.627046 1_1:+9742289 None:intergenic
ATGCCCTGCAATTTCCGACA+AGG 0.628954 1_1:-9741732 Msa0006740:CDS
GGAATCGGAGATCGCACACA+AGG 0.629259 1_1:+9740704 None:intergenic
GGGTAGCGTTGCCAAATCCA+GGG 0.632564 1_1:+9741015 None:intergenic
CTGACACGTGATCTCTTCTG+AGG 0.633789 1_1:+9742286 None:intergenic
ACAAGACTCTAATGATAACT+CGG 0.633790 1_1:+9741673 None:intergenic
CTCTCTCACTAACATTTGGG+AGG 0.636568 1_1:+9741420 None:intergenic
AAAGCCGAAGACTTGAGACA+TGG 0.637618 1_1:+9742998 None:intergenic
AGTGACTGTGAAGAGTTTGG+AGG 0.637667 1_1:-9742034 Msa0006740:CDS
AATACACCATACAAACACAA+AGG 0.641843 1_1:+9739820 None:intergenic
AAGCCGAAGACTTGAGACAT+GGG 0.649190 1_1:+9742999 None:intergenic
GATTCCTTGATCCCCAACAC+CGG 0.655421 1_1:+9741571 None:intergenic
TCCATTGCTTGAGAGCTCCG+AGG 0.656114 1_1:-9740910 Msa0006740:CDS
TCTCTGAGAACACAACTACC+GGG 0.663577 1_1:-9740233 Msa0006740:three_prime_UTR
ACCTTCTAAAGATCTCAAAG+AGG 0.665153 1_1:+9742188 None:intergenic
CGTGGAAGCAACTCAGAACG+CGG 0.669342 1_1:-9741902 Msa0006740:CDS
GTTGGAACTGCATCACGAGG+AGG 0.679979 1_1:-9741944 Msa0006740:CDS
AGATTCCTAACTCCAGAACC+CGG 0.680416 1_1:+9740215 None:intergenic
CCAACCATGCAGATTGACCA+GGG 0.686419 1_1:+9740827 None:intergenic
GGTTTGTGTATAACCCACCA+TGG 0.686541 1_1:+9742365 None:intergenic
AATAGCAGCAAGTCTAACAT+CGG 0.688914 1_1:+9741970 None:intergenic
GCAGTTGGAACTGCATCACG+AGG 0.700255 1_1:-9741947 Msa0006740:CDS
AAAAGAAAGAGAAAATTTGG+GGG 0.715461 1_1:+9743199 None:intergenic
TGGGTTATACACAAACCCCA+AGG 0.726645 1_1:-9742359 Msa0006740:CDS
CAAAACACCTATTGACACCG+TGG 0.742161 1_1:+9740091 None:intergenic
GATGTTGGGATTGAAGCTGT+GGG 0.743132 1_1:-9741320 Msa0006740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAGAGAAAATTT+GGG + chr1_1:9739860-9739879 None:intergenic 15.0%
!! AAAAAAAGAAAGAGAAAATT+TGG + chr1_1:9739861-9739880 None:intergenic 15.0%
!!! TATTTGATTCATAGATTTTT+AGG - chr1_1:9740110-9740129 Msa0006740:three_prime_UTR 15.0%
!! AAAAAGAAAGAGAAAATTTG+GGG + chr1_1:9739859-9739878 None:intergenic 20.0%
!!! AATTCTCTTAATTTGTTATG+TGG - chr1_1:9740283-9740302 Msa0006740:three_prime_UTR 20.0%
!! AGATCTATAAGATTAGTATT+TGG - chr1_1:9740365-9740384 Msa0006740:three_prime_UTR 20.0%
!! GATCTATAAGATTAGTATTT+GGG - chr1_1:9740366-9740385 Msa0006740:three_prime_UTR 20.0%
!!! TTTTACTTTTCTGATATCAT+AGG - chr1_1:9740498-9740517 Msa0006740:CDS 20.0%
!! TAGATATAACCTTAAGATTT+GGG + chr1_1:9741451-9741470 None:intergenic 20.0%
!! ATAGATATAACCTTAAGATT+TGG + chr1_1:9741452-9741471 None:intergenic 20.0%
!!! CAAATTTTATTTCATCATTG+TGG + chr1_1:9743261-9743280 None:intergenic 20.0%
!!! AATATCAAAACAAATGCTTT+TGG + chr1_1:9743294-9743313 None:intergenic 20.0%
! TTAATGAACCATTCATTGTA+TGG - chr1_1:9739741-9739760 Msa0006740:three_prime_UTR 25.0%
! TAATGAACCATTCATTGTAT+GGG - chr1_1:9739742-9739761 Msa0006740:three_prime_UTR 25.0%
!! TTTTATTGTAAGAGACAAGT+GGG + chr1_1:9739777-9739796 None:intergenic 25.0%
!! TTTTTATTGTAAGAGACAAG+TGG + chr1_1:9739778-9739797 None:intergenic 25.0%
! AATGAAAAATGAAGGGAAAA+GGG + chr1_1:9739805-9739824 None:intergenic 25.0%
! GAAGATGAATGAAAAATGAA+GGG + chr1_1:9739812-9739831 None:intergenic 25.0%
! AGAAGATGAATGAAAAATGA+AGG + chr1_1:9739813-9739832 None:intergenic 25.0%
! AAAAGAAAGAGAAAATTTGG+GGG + chr1_1:9739858-9739877 None:intergenic 25.0%
!!! TTTTTTGCCCTATTTCAATT+AGG - chr1_1:9739875-9739894 Msa0006740:three_prime_UTR 25.0%
!! TTTTTGCCCTATTTCAATTA+GGG - chr1_1:9739876-9739895 Msa0006740:three_prime_UTR 25.0%
!!! ATTTGATTTGTGAGTATTGA+AGG + chr1_1:9739971-9739990 None:intergenic 25.0%
!!! ATTCATAGATTTTTAGGTTG+TGG - chr1_1:9740116-9740135 Msa0006740:three_prime_UTR 25.0%
!!! TTCATAGATTTTTAGGTTGT+GGG - chr1_1:9740117-9740136 Msa0006740:three_prime_UTR 25.0%
!!! ATGATGATTTTGATGTTCAT+AGG - chr1_1:9740197-9740216 Msa0006740:three_prime_UTR 25.0%
!!! TCTTAATTTGTTATGTGGTA+TGG - chr1_1:9740288-9740307 Msa0006740:three_prime_UTR 25.0%
!!! ACATAGTTTTGATTGATTAG+CGG - chr1_1:9740401-9740420 Msa0006740:three_prime_UTR 25.0%
! TCTTAAGGTTATATCTATCA+AGG - chr1_1:9741454-9741473 Msa0006740:CDS 25.0%
!!! AAAATTGAAGGCTTTTTCTA+TGG - chr1_1:9741928-9741947 Msa0006740:CDS 25.0%
!!! TGATATTTTTACAACCTTCA+AGG + chr1_1:9742270-9742289 None:intergenic 25.0%
!!! TTTTTTGGTCCATTAACTTT+GGG - chr1_1:9742659-9742678 Msa0006740:intron 25.0%
! AAGGAATCTGCAAAAAAATA+TGG + chr1_1:9742741-9742760 None:intergenic 25.0%
! AAAAACAGAATTCCAATCAA+AGG + chr1_1:9742760-9742779 None:intergenic 25.0%
!! TTTGATTGGAATTCTGTTTT+TGG - chr1_1:9742759-9742778 Msa0006740:intron 25.0%
!!! TTAGGAATCTTTGTTACTTT+GGG - chr1_1:9742852-9742871 Msa0006740:intron 25.0%
!!! AAAGGTTGTTTTTTTATACC+AGG - chr1_1:9743128-9743147 Msa0006740:five_prime_UTR 25.0%
! TGAAGCCTTAAAAAAAACTA+GGG + chr1_1:9743154-9743173 None:intergenic 25.0%
! ATGAAGCCTTAAAAAAAACT+AGG + chr1_1:9743155-9743174 None:intergenic 25.0%
GAATGAAAAATGAAGGGAAA+AGG + chr1_1:9739806-9739825 None:intergenic 30.0%
TGGAAACCCTAATTGAAATA+GGG + chr1_1:9739885-9739904 None:intergenic 30.0%
TTGGAAACCCTAATTGAAAT+AGG + chr1_1:9739886-9739905 None:intergenic 30.0%
TGTTATGAAATCGTGGAAAT+TGG + chr1_1:9739905-9739924 None:intergenic 30.0%
GAATTTGTGTTATGAAATCG+TGG + chr1_1:9739912-9739931 None:intergenic 30.0%
TTAAGTGGTGAAATTTCAAC+TGG - chr1_1:9740323-9740342 Msa0006740:three_prime_UTR 30.0%
TAAGTGGTGAAATTTCAACT+GGG - chr1_1:9740324-9740343 Msa0006740:three_prime_UTR 30.0%
CTATAAGATTAGTATTTGGG+AGG - chr1_1:9740369-9740388 Msa0006740:three_prime_UTR 30.0%
!!! TTGAGAAGTTTGTTTTGCAT+AGG - chr1_1:9740529-9740548 Msa0006740:CDS 30.0%
!!! AGCAGTTTTGTTGAATTTGA+TGG - chr1_1:9740561-9740580 Msa0006740:CDS 30.0%
! CATTTTATTCTCGTCATTTG+AGG + chr1_1:9740997-9741016 None:intergenic 30.0%
CTCAAATGACGAGAATAAAA+TGG - chr1_1:9740995-9741014 Msa0006740:CDS 30.0%
! AAAGAGAAAGACTTTAGAGA+AGG + chr1_1:9741218-9741237 None:intergenic 30.0%
!! CTCTAAAGTCTTTCTCTTTA+TGG - chr1_1:9741219-9741238 Msa0006740:CDS 30.0%
TTATGGAATGTTTCTTCTGT+TGG - chr1_1:9741236-9741255 Msa0006740:CDS 30.0%
ACAAGACTCTAATGATAACT+CGG + chr1_1:9741384-9741403 None:intergenic 30.0%
TAACATTTGGGAGGAAATTA+AGG + chr1_1:9741628-9741647 None:intergenic 30.0%
! AGATGTACGCTTTTCAAATT+AGG + chr1_1:9741770-9741789 None:intergenic 30.0%
!! ATTACCCAATTTGGGTTTTT+CGG - chr1_1:9741884-9741903 Msa0006740:CDS 30.0%
! ATTTTGCACCACAGTTAAAA+AGG + chr1_1:9741913-9741932 None:intergenic 30.0%
! CTTCAACAAGTTGAATTAAC+TGG - chr1_1:9742091-9742110 Msa0006740:CDS 30.0%
AGTTGAATTAACTGGACTTA+AGG - chr1_1:9742099-9742118 Msa0006740:CDS 30.0%
GTTGAATTAACTGGACTTAA+GGG - chr1_1:9742100-9742119 Msa0006740:CDS 30.0%
CTTGTTAAAGTTAATCTCAG+TGG - chr1_1:9742172-9742191 Msa0006740:CDS 30.0%
!!! GTTTTTTGGTCCATTAACTT+TGG - chr1_1:9742658-9742677 Msa0006740:intron 30.0%
! TTTTTGCAGATTCCTTTGAT+TGG - chr1_1:9742745-9742764 Msa0006740:intron 30.0%
! GTTAGGAATCTTTGTTACTT+TGG - chr1_1:9742851-9742870 Msa0006740:intron 30.0%
ACTGTAAAAACATAGACAGA+GGG + chr1_1:9742935-9742954 None:intergenic 30.0%
AACTGTAAAAACATAGACAG+AGG + chr1_1:9742936-9742955 None:intergenic 30.0%
! TTTTACAGTTATCTGTACCA+CGG - chr1_1:9742946-9742965 Msa0006740:intron 30.0%
! CATGACAATCTTTTTCCATT+GGG - chr1_1:9743105-9743124 Msa0006740:five_prime_UTR 30.0%
AAAAAAACAACCTTTCCCAA+TGG + chr1_1:9743123-9743142 None:intergenic 30.0%
ATACACCATACAAACACAAA+GGG + chr1_1:9743236-9743255 None:intergenic 30.0%
AATACACCATACAAACACAA+AGG + chr1_1:9743237-9743256 None:intergenic 30.0%
AAAAATGAAGGGAAAAGGGA+AGG + chr1_1:9739801-9739820 None:intergenic 35.0%
AGATTGAGAGAGAGAAAAAG+AGG + chr1_1:9739934-9739953 None:intergenic 35.0%
AGCAAAGAAGAAGAAGAAGA+CGG + chr1_1:9739997-9740016 None:intergenic 35.0%
!!! CTTTTTTTGCACTCTTTGGA+GGG - chr1_1:9740018-9740037 Msa0006740:three_prime_UTR 35.0%
CAACCAAAAATAGTAGCATG+CGG - chr1_1:9740156-9740175 Msa0006740:three_prime_UTR 35.0%
ATGTGGTATGGATAATCATG+TGG - chr1_1:9740300-9740319 Msa0006740:three_prime_UTR 35.0%
TGGATAATCATGTGGTTAAG+TGG - chr1_1:9740308-9740327 Msa0006740:three_prime_UTR 35.0%
AACGATTGTGCAAAATCATC+AGG + chr1_1:9740645-9740664 None:intergenic 35.0%
! AGGAAGAAATTTGCTTCCTT+GGG + chr1_1:9740714-9740733 None:intergenic 35.0%
GATAGTAGACATCAACTTGA+GGG + chr1_1:9740746-9740765 None:intergenic 35.0%
!! AGTGTTCCATTTGTTTTCGA+TGG - chr1_1:9740789-9740808 Msa0006740:CDS 35.0%
CATTCTCCATCGAAAACAAA+TGG + chr1_1:9740798-9740817 None:intergenic 35.0%
!! CATTTGTTTTCGATGGAGAA+TGG - chr1_1:9740796-9740815 Msa0006740:CDS 35.0%
! ACCTTCTAAAGATCTCAAAG+AGG + chr1_1:9740869-9740888 None:intergenic 35.0%
TTTATTCTCGTCATTTGAGG+AGG + chr1_1:9740994-9741013 None:intergenic 35.0%
AATAGCAGCAAGTCTAACAT+CGG + chr1_1:9741087-9741106 None:intergenic 35.0%
ATCCATTAGCGATCTCAATA+AGG + chr1_1:9741271-9741290 None:intergenic 35.0%
AAAGTTCTGCCCAAATCTTA+AGG - chr1_1:9741439-9741458 Msa0006740:CDS 35.0%
GAGGAAATTAAGGACAAGAT+CGG + chr1_1:9741618-9741637 None:intergenic 35.0%
ATCACTTGAAAGCCTACAAT+TGG - chr1_1:9741847-9741866 Msa0006740:CDS 35.0%
TAACTGTGGTGCAAAATTGA+AGG - chr1_1:9741916-9741935 Msa0006740:CDS 35.0%
! TTTTCTATGGTAAGCTGCTT+TGG - chr1_1:9741941-9741960 Msa0006740:CDS 35.0%
! TTTCTATGGTAAGCTGCTTT+GGG - chr1_1:9741942-9741961 Msa0006740:CDS 35.0%
AGTGATTCACAATGAGATAC+AGG + chr1_1:9741995-9742014 None:intergenic 35.0%
!! ATTCAACTTGTTGAAGCTGA+GGG + chr1_1:9742087-9742106 None:intergenic 35.0%
!! AATTCAACTTGTTGAAGCTG+AGG + chr1_1:9742088-9742107 None:intergenic 35.0%
CATCAAGATCACAAAGCAAT+TGG + chr1_1:9742327-9742346 None:intergenic 35.0%
!! TTACCCGCTTTGAGAAAATT+GGG - chr1_1:9742457-9742476 Msa0006740:intron 35.0%
CTGGATATTTAGTCCCAAAA+GGG + chr1_1:9742488-9742507 None:intergenic 35.0%
! AGATGCTTGTTGAACATCTT+TGG - chr1_1:9742539-9742558 Msa0006740:intron 35.0%
TAAATCTTGCAGTTCAGGAA+AGG + chr1_1:9742576-9742595 None:intergenic 35.0%
GAGATTAAATCTTGCAGTTC+AGG + chr1_1:9742581-9742600 None:intergenic 35.0%
CTGCAAGATTTAATCTCACA+CGG - chr1_1:9742584-9742603 Msa0006740:intron 35.0%
TTAATCTCACACGGCAATTT+AGG - chr1_1:9742593-9742612 Msa0006740:intron 35.0%
!!! TACACGGCATAGTAGTTTTT+TGG - chr1_1:9742644-9742663 Msa0006740:intron 35.0%
TGATCAAGACCCAAAGTTAA+TGG + chr1_1:9742671-9742690 None:intergenic 35.0%
!!! TGTTTTTGGCACCATGTATT+TGG - chr1_1:9742773-9742792 Msa0006740:intron 35.0%
! TTTGGTTGCTGCCTTTTAAA+TGG - chr1_1:9742791-9742810 Msa0006740:intron 35.0%
GAGATATGCAGCCATTTAAA+AGG + chr1_1:9742805-9742824 None:intergenic 35.0%
!! GAATCTTTGTTACTTTGGGT+TGG - chr1_1:9742856-9742875 Msa0006740:intron 35.0%
!!! TTTTTAGCTCGGCTTTGTAT+CGG - chr1_1:9742888-9742907 Msa0006740:intron 35.0%
! TTTGACTCAAACAGAGGTAT+CGG - chr1_1:9742982-9743001 Msa0006740:intron 35.0%
!!! TTATGAAGCCTTGTTTTCGA+GGG - chr1_1:9743049-9743068 Msa0006740:five_prime_UTR 35.0%
CCAATGGAAAAAGATTGTCA+TGG + chr1_1:9743107-9743126 None:intergenic 35.0%
! CCATGACAATCTTTTTCCAT+TGG - chr1_1:9743104-9743123 Msa0006740:five_prime_UTR 35.0%
! CAATCTTTTTCCATTGGGAA+AGG - chr1_1:9743110-9743129 Msa0006740:five_prime_UTR 35.0%
ACGGATTCCCATACAATGAA+TGG + chr1_1:9739752-9739771 None:intergenic 40.0%
TGTAAGAGACAAGTGGGAAA+CGG + chr1_1:9739771-9739790 None:intergenic 40.0%
!!! GCTGCTTTTTTTGCACTCTT+TGG - chr1_1:9740014-9740033 Msa0006740:three_prime_UTR 40.0%
!!! GCTTTTTTTGCACTCTTTGG+AGG - chr1_1:9740017-9740036 Msa0006740:three_prime_UTR 40.0%
! GAACCGCATGCTACTATTTT+TGG + chr1_1:9740162-9740181 None:intergenic 40.0%
GCACAATCGTTTATGTTCTC+AGG - chr1_1:9740654-9740673 Msa0006740:CDS 40.0%
! GGAAGAAATTTGCTTCCTTG+GGG + chr1_1:9740713-9740732 None:intergenic 40.0%
! CAGGAAGAAATTTGCTTCCT+TGG + chr1_1:9740715-9740734 None:intergenic 40.0%
GCAAATTTCTTCCTGTCTCT+TGG - chr1_1:9740720-9740739 Msa0006740:CDS 40.0%
GGATAGTAGACATCAACTTG+AGG + chr1_1:9740747-9740766 None:intergenic 40.0%
!! GCCTCTTTGAGATCTTTAGA+AGG - chr1_1:9740865-9740884 Msa0006740:CDS 40.0%
! ATCTTTAGAAGGTTGCCTGT+TGG - chr1_1:9740876-9740895 Msa0006740:CDS 40.0%
GATAGTGACTGTGAAGAGTT+TGG - chr1_1:9741017-9741036 Msa0006740:CDS 40.0%
!! GTTTCTTCTGTTGGTGATGA+AGG - chr1_1:9741245-9741264 Msa0006740:CDS 40.0%
! AAATTGCAGGGCATTTGCAA+AGG + chr1_1:9741316-9741335 None:intergenic 40.0%
! AACTGCGATTAAAGCCTTGT+CGG + chr1_1:9741339-9741358 None:intergenic 40.0%
AATGATAACTCGGTCAGAGT+CGG + chr1_1:9741374-9741393 None:intergenic 40.0%
AATGAAGGTCTACAAGCCAT+TGG - chr1_1:9741416-9741435 Msa0006740:CDS 40.0%
ATTTGGGCAGAACTTTCCAA+TGG + chr1_1:9741435-9741454 None:intergenic 40.0%
ATATCTATCAAGGACTGTGC+CGG - chr1_1:9741464-9741483 Msa0006740:CDS 40.0%
CCAAAGAAGTCGAAGAAAAC+AGG + chr1_1:9741514-9741533 None:intergenic 40.0%
! CCTGTTTTCTTCGACTTCTT+TGG - chr1_1:9741511-9741530 Msa0006740:CDS 40.0%
!! GACTTCTTTGGTTCTGACAA+AGG - chr1_1:9741523-9741542 Msa0006740:CDS 40.0%
AGCTAGAGAGAGATCAGAAA+CGG + chr1_1:9741567-9741586 None:intergenic 40.0%
GATCTCTCTCTAGCTGTTAT+TGG - chr1_1:9741572-9741591 Msa0006740:CDS 40.0%
CTAGCTGTTATTGGACACTA+TGG - chr1_1:9741581-9741600 Msa0006740:CDS 40.0%
AGCCTCTCTCACTAACATTT+GGG + chr1_1:9741640-9741659 None:intergenic 40.0%
AAGCCTCTCTCACTAACATT+TGG + chr1_1:9741641-9741660 None:intergenic 40.0%
TGGGTTATGGGAAATGCTAA+TGG - chr1_1:9741662-9741681 Msa0006740:CDS 40.0%
TGTGCATTTCTCTCAGACAA+CGG - chr1_1:9741797-9741816 Msa0006740:CDS 40.0%
! CGGATTGATTTCATTCACCA+AGG - chr1_1:9741817-9741836 Msa0006740:CDS 40.0%
TTCAAGTGATATAGCAGCCT+TGG + chr1_1:9741837-9741856 None:intergenic 40.0%
TGCCACAGAATTACCCAATT+TGG - chr1_1:9741875-9741894 Msa0006740:CDS 40.0%
GCCACAGAATTACCCAATTT+GGG - chr1_1:9741876-9741895 Msa0006740:CDS 40.0%
ACCCAAATTGGGTAATTCTG+TGG + chr1_1:9741880-9741899 None:intergenic 40.0%
CAACTTTCCGAGTACAGAAA+GGG + chr1_1:9742062-9742081 None:intergenic 40.0%
ACAACTTTCCGAGTACAGAA+AGG + chr1_1:9742063-9742082 None:intergenic 40.0%
AACTTTAACAAGACCAGCCT+CGG + chr1_1:9742164-9742183 None:intergenic 40.0%
CAGGGATGAAACTACTTTGT+CGG + chr1_1:9742212-9742231 None:intergenic 40.0%
CTCGAAATTCTGAACCTTGA+AGG - chr1_1:9742253-9742272 Msa0006740:CDS 40.0%
CTACAGATTCTTTCTCTGTC+AGG - chr1_1:9742409-9742428 Msa0006740:intron 40.0%
!! CTTACCCGCTTTGAGAAAAT+TGG - chr1_1:9742456-9742475 Msa0006740:intron 40.0%
TATTTAGTCCCAAAAGGGTG+TGG + chr1_1:9742483-9742502 None:intergenic 40.0%
GCTGGATATTTAGTCCCAAA+AGG + chr1_1:9742489-9742508 None:intergenic 40.0%
! TGCTGATTGAATTGCAATGC+TGG + chr1_1:9742507-9742526 None:intergenic 40.0%
! TGCTTGTTGAACATCTTTGG+AGG - chr1_1:9742542-9742561 Msa0006740:intron 40.0%
CATGCAGAAGTCTAGTTACA+CGG - chr1_1:9742628-9742647 Msa0006740:intron 40.0%
TTGATCATCATCCAGTGACT+CGG - chr1_1:9742684-9742703 Msa0006740:intron 40.0%
GGTTAAATGACTGCATACTC+CGG + chr1_1:9742720-9742739 None:intergenic 40.0%
AAAGGCAGCAACCAAATACA+TGG + chr1_1:9742787-9742806 None:intergenic 40.0%
! ATCTCTGAGAACACAACTAC+CGG - chr1_1:9742820-9742839 Msa0006740:intron 40.0%
AAAGCCGAGCTAAAAACATC+AGG + chr1_1:9742884-9742903 None:intergenic 40.0%
CAGAGGGAACTAAGAAATTG+TGG + chr1_1:9742919-9742938 None:intergenic 40.0%
!!! AGGTGTTTTGACTCAAACAG+AGG - chr1_1:9742976-9742995 Msa0006740:intron 40.0%
TCGGTATTAGTGCTCTTGTT+AGG - chr1_1:9743001-9743020 Msa0006740:exon 40.0%
CGGTATTAGTGCTCTTGTTA+GGG - chr1_1:9743002-9743021 Msa0006740:exon 40.0%
!!! GTTATGAAGCCTTGTTTTCG+AGG - chr1_1:9743048-9743067 Msa0006740:five_prime_UTR 40.0%
CCTTAAAAAAAACTAGGGCC+TGG + chr1_1:9743149-9743168 None:intergenic 40.0%
!!! CCAGGCCCTAGTTTTTTTTA+AGG - chr1_1:9743146-9743165 Msa0006740:five_prime_UTR 40.0%
ATCTGCCCTTTGTGTTTGTA+TGG - chr1_1:9743228-9743247 Msa0006740:five_prime_UTR 40.0%
AAGCCGAAGACTTGAGACAT+GGG + chr1_1:9740058-9740077 None:intergenic 45.0%
AAAGCCGAAGACTTGAGACA+TGG + chr1_1:9740059-9740078 None:intergenic 45.0%
! TCTCAAGTCTTCGGCTTTTC+TGG - chr1_1:9740061-9740080 Msa0006740:three_prime_UTR 45.0%
! TCAGGTGATAGCTTTTGCCA+TGG - chr1_1:9740672-9740691 Msa0006740:CDS 45.0%
! GTGATAGCTTTTGCCATGGT+GGG - chr1_1:9740676-9740695 Msa0006740:CDS 45.0%
GGTTTGTGTATAACCCACCA+TGG + chr1_1:9740692-9740711 None:intergenic 45.0%
TGGGTTATACACAAACCCCA+AGG - chr1_1:9740695-9740714 Msa0006740:CDS 45.0%
!! ATCTCAAAGAGGCACTCATC+TGG + chr1_1:9740858-9740877 None:intergenic 45.0%
AGTGACTGTGAAGAGTTTGG+AGG - chr1_1:9741020-9741039 Msa0006740:CDS 45.0%
TGTGAAGAGTTTGGAGGTGA+GGG - chr1_1:9741026-9741045 Msa0006740:CDS 45.0%
CTTCTTTCCTTCCAAGCTTC+GGG + chr1_1:9741060-9741079 None:intergenic 45.0%
CCTTCTTTCCTTCCAAGCTT+CGG + chr1_1:9741061-9741080 None:intergenic 45.0%
!! AGACTTGCTGCTATTGCAGT+TGG - chr1_1:9741092-9741111 Msa0006740:CDS 45.0%
TTAGGGAAGCTTTCAATCCG+TGG - chr1_1:9741134-9741153 Msa0006740:CDS 45.0%
!! GGCCTTATTGAGATCGCTAA+TGG - chr1_1:9741266-9741285 Msa0006740:CDS 45.0%
! AAGCCTTGTCGGAAATTGCA+GGG + chr1_1:9741328-9741347 None:intergenic 45.0%
! AAAGCCTTGTCGGAAATTGC+AGG + chr1_1:9741329-9741348 None:intergenic 45.0%
TGTCCTAGCATTCGCAATGA+AGG - chr1_1:9741401-9741420 Msa0006740:CDS 45.0%
AGACCTTCATTGCGAATGCT+AGG + chr1_1:9741407-9741426 None:intergenic 45.0%
AAAGGTGAAGCTTCAAGCAC+TGG - chr1_1:9741541-9741560 Msa0006740:CDS 45.0%
CTCTCTCACTAACATTTGGG+AGG + chr1_1:9741637-9741656 None:intergenic 45.0%
CTCCCAAATGTTAGTGAGAG+AGG - chr1_1:9741635-9741654 Msa0006740:CDS 45.0%
ATGTTAGTGAGAGAGGCTTC+TGG - chr1_1:9741642-9741661 Msa0006740:CDS 45.0%
TGTTAGTGAGAGAGGCTTCT+GGG - chr1_1:9741643-9741662 Msa0006740:CDS 45.0%
CACAGCTTCAATCCCAACAT+CGG + chr1_1:9741735-9741754 None:intergenic 45.0%
GATGTTGGGATTGAAGCTGT+GGG - chr1_1:9741734-9741753 Msa0006740:CDS 45.0%
TGTGGCACTCTTCCAATTGT+AGG + chr1_1:9741862-9741881 None:intergenic 45.0%
GACGCCGAAAAACCCAAATT+GGG + chr1_1:9741891-9741910 None:intergenic 45.0%
!! TTCGGCGTCCTTTTTAACTG+TGG - chr1_1:9741902-9741921 Msa0006740:CDS 45.0%
TTATCGATCTGTAACTGCCC+TGG - chr1_1:9742022-9742041 Msa0006740:CDS 45.0%
ATCTGTAACTGCCCTGGATT+TGG - chr1_1:9742028-9742047 Msa0006740:CDS 45.0%
AACGCTACCCTTTCTGTACT+CGG - chr1_1:9742052-9742071 Msa0006740:CDS 45.0%
TTAAGGGAGTCACAGATGCT+GGG - chr1_1:9742116-9742135 Msa0006740:CDS 45.0%
CGACAAAGTAGTTTCATCCC+TGG - chr1_1:9742210-9742229 Msa0006740:CDS 45.0%
! TATCTGTTTTGCGTGTGCCA+GGG + chr1_1:9742386-9742405 None:intergenic 45.0%
! TTATCTGTTTTGCGTGTGCC+AGG + chr1_1:9742387-9742406 None:intergenic 45.0%
! TGGCCCAATTTTCTCAAAGC+GGG + chr1_1:9742463-9742482 None:intergenic 45.0%
! GTGGCCCAATTTTCTCAAAG+CGG + chr1_1:9742464-9742483 None:intergenic 45.0%
! AAAATTGGGCCACACCCTTT+TGG - chr1_1:9742471-9742490 Msa0006740:intron 45.0%
! AAATTGGGCCACACCCTTTT+GGG - chr1_1:9742472-9742491 Msa0006740:intron 45.0%
TGATCATCATCCAGTGACTC+GGG - chr1_1:9742685-9742704 Msa0006740:intron 45.0%
GACTGCATACTCCGGAAAAA+GGG + chr1_1:9742712-9742731 None:intergenic 45.0%
TGACTGCATACTCCGGAAAA+AGG + chr1_1:9742713-9742732 None:intergenic 45.0%
! TCTCTGAGAACACAACTACC+GGG - chr1_1:9742821-9742840 Msa0006740:intron 45.0%
AGATTCCTAACTCCAGAACC+CGG + chr1_1:9742842-9742861 None:intergenic 45.0%
!!! GGCACCTGATGTTTTTAGCT+CGG - chr1_1:9742877-9742896 Msa0006740:intron 45.0%
! ATCTGTACCACGGTGTCAAT+AGG - chr1_1:9742956-9742975 Msa0006740:intron 45.0%
CAAAACACCTATTGACACCG+TGG + chr1_1:9742966-9742985 None:intergenic 45.0%
TTAGGGTTGTTGCAGTTGTC+TGG - chr1_1:9743019-9743038 Msa0006740:five_prime_UTR 45.0%
! ACATGTATAACTTGCCGCCA+CGG + chr1_1:9743081-9743100 None:intergenic 45.0%
!!! TATTTTTTATGAAATAATTA+TGG - chr1_1:9740250-9740269 Msa0006740:three_prime_UTR 5.0%
!!! ATTTTTTATGAAATAATTAT+GGG - chr1_1:9740251-9740270 Msa0006740:three_prime_UTR 5.0%
GCACCCATGTCTCAAGTCTT+CGG - chr1_1:9740052-9740071 Msa0006740:three_prime_UTR 50.0%
! GGTGATAGCTTTTGCCATGG+TGG - chr1_1:9740675-9740694 Msa0006740:CDS 50.0%
! ACACGTGATCTCTTCTGAGG+TGG + chr1_1:9740768-9740787 None:intergenic 50.0%
CTGACACGTGATCTCTTCTG+AGG + chr1_1:9740771-9740790 None:intergenic 50.0%
! GGTTGCCTGTTGGTGAAGAA+AGG - chr1_1:9740886-9740905 Msa0006740:CDS 50.0%
GCACTCCTTTCTTCACCAAC+AGG + chr1_1:9740894-9740913 None:intergenic 50.0%
CTGCTTGTGTTTCCAAACGC+TGG - chr1_1:9740916-9740935 Msa0006740:CDS 50.0%
! CAGAAGCATAAGCCAGCGTT+TGG + chr1_1:9740931-9740950 None:intergenic 50.0%
CTGTGAAGAGTTTGGAGGTG+AGG - chr1_1:9741025-9741044 Msa0006740:CDS 50.0%
TACCTTTCCCGAAGCTTGGA+AGG - chr1_1:9741050-9741069 Msa0006740:CDS 50.0%
TTCCTTCCAAGCTTCGGGAA+AGG + chr1_1:9741055-9741074 None:intergenic 50.0%
CCGAAGCTTGGAAGGAAAGA+AGG - chr1_1:9741058-9741077 Msa0006740:CDS 50.0%
ACTGCATCACGAGGAGGATT+AGG - chr1_1:9741116-9741135 Msa0006740:CDS 50.0%
CTGCATCACGAGGAGGATTA+GGG - chr1_1:9741117-9741136 Msa0006740:CDS 50.0%
GGTCTCAAAGCAGTTGCTAG+TGG - chr1_1:9741188-9741207 Msa0006740:CDS 50.0%
ATGCCCTGCAATTTCCGACA+AGG - chr1_1:9741322-9741341 Msa0006740:CDS 50.0%
GATTCCTTGATCCCCAACAC+CGG + chr1_1:9741486-9741505 None:intergenic 50.0%
TGAGAGAGGCTTCTGGGTTA+TGG - chr1_1:9741649-9741668 Msa0006740:CDS 50.0%
GAGAGAGGCTTCTGGGTTAT+GGG - chr1_1:9741650-9741669 Msa0006740:CDS 50.0%
CTCACAATTGCATCCTGCAG+AGG - chr1_1:9741704-9741723 Msa0006740:CDS 50.0%
! AACATCGGTTACTCCTCTGC+AGG + chr1_1:9741720-9741739 None:intergenic 50.0%
TGCAGAGGAGTAACCGATGT+TGG - chr1_1:9741719-9741738 Msa0006740:CDS 50.0%
GCAGAGGAGTAACCGATGTT+GGG - chr1_1:9741720-9741739 Msa0006740:CDS 50.0%
CGATGTTGGGATTGAAGCTG+TGG - chr1_1:9741733-9741752 Msa0006740:CDS 50.0%
TGGGATTGAAGCTGTGGGAA+AGG - chr1_1:9741739-9741758 Msa0006740:CDS 50.0%
GGGATTGAAGCTGTGGGAAA+GGG - chr1_1:9741740-9741759 Msa0006740:CDS 50.0%
GGACGCCGAAAAACCCAAAT+TGG + chr1_1:9741892-9741911 None:intergenic 50.0%
!! GGTAAGCTGCTTTGGGATCA+AGG - chr1_1:9741949-9741968 Msa0006740:CDS 50.0%
!! CTGCTTTGGGATCAAGGATC+TGG - chr1_1:9741955-9741974 Msa0006740:CDS 50.0%
TGGGATCAAGGATCTGGACT+TGG - chr1_1:9741961-9741980 Msa0006740:CDS 50.0%
CTTAAGGGAGTCACAGATGC+TGG - chr1_1:9742115-9742134 Msa0006740:CDS 50.0%
TCATCCCTGGTCAATCTGCA+TGG - chr1_1:9742223-9742242 Msa0006740:CDS 50.0%
CCAACCATGCAGATTGACCA+GGG + chr1_1:9742230-9742249 None:intergenic 50.0%
TCCAACCATGCAGATTGACC+AGG + chr1_1:9742231-9742250 None:intergenic 50.0%
TTGTGTGCGATCTCCGATTC+CGG - chr1_1:9742352-9742371 Msa0006740:CDS 50.0%
TTCTCTGTCAGGCTGCACTT+TGG - chr1_1:9742420-9742439 Msa0006740:intron 50.0%
GTCAGGCTGCACTTTGGTTA+CGG - chr1_1:9742426-9742445 Msa0006740:intron 50.0%
AGAACACAACTACCGGGTTC+TGG - chr1_1:9742827-9742846 Msa0006740:intron 50.0%
!! AACTACCGGGTTCTGGAGTT+AGG - chr1_1:9742834-9742853 Msa0006740:intron 50.0%
CAACTTGAGGGCCAAGAGAC+AGG + chr1_1:9740734-9740753 None:intergenic 55.0%
GGGATACCTTTCCCGAAGCT+TGG - chr1_1:9741046-9741065 Msa0006740:CDS 55.0%
GCAGTTGGAACTGCATCACG+AGG - chr1_1:9741107-9741126 Msa0006740:CDS 55.0%
GTTGGAACTGCATCACGAGG+AGG - chr1_1:9741110-9741129 Msa0006740:CDS 55.0%
! CGCGTTCTGAGTTGCTTCCA+CGG + chr1_1:9741154-9741173 None:intergenic 55.0%
CGTGGAAGCAACTCAGAACG+CGG - chr1_1:9741152-9741171 Msa0006740:CDS 55.0%
! ATCAAGGACTGTGCCGGTGT+TGG - chr1_1:9741470-9741489 Msa0006740:CDS 55.0%
! TCAAGGACTGTGCCGGTGTT+GGG - chr1_1:9741471-9741490 Msa0006740:CDS 55.0%
GTTGGGGATCAAGGAATCGC+TGG - chr1_1:9741488-9741507 Msa0006740:CDS 55.0%
GGGTAGCGTTGCCAAATCCA+GGG + chr1_1:9742042-9742061 None:intergenic 55.0%
AGGGTAGCGTTGCCAAATCC+AGG + chr1_1:9742043-9742062 None:intergenic 55.0%
TCCATTGCTTGAGAGCTCCG+AGG - chr1_1:9742144-9742163 Msa0006740:CDS 55.0%
CCCTGGTCAATCTGCATGGT+TGG - chr1_1:9742227-9742246 Msa0006740:CDS 55.0%
GGAATCGGAGATCGCACACA+AGG + chr1_1:9742353-9742372 None:intergenic 55.0%
TGTGTGCGATCTCCGATTCC+GGG - chr1_1:9742353-9742372 Msa0006740:CDS 55.0%
GCTGCACTTTGGTTACGGAC+AGG - chr1_1:9742431-9742450 Msa0006740:intron 55.0%
GAAAAAGGGACCCGAGTCAC+TGG + chr1_1:9742698-9742717 None:intergenic 55.0%
!! GTGACTCGGGTCCCTTTTTC+CGG - chr1_1:9742698-9742717 Msa0006740:intron 55.0%
!!! AGCCTTGTTTTCGAGGGCCT+TGG - chr1_1:9743055-9743074 Msa0006740:five_prime_UTR 55.0%
GAACGCGGCGTGACAACTCT+AGG - chr1_1:9741167-9741186 Msa0006740:CDS 60.0%
! CAAGGACTGTGCCGGTGTTG+GGG - chr1_1:9741472-9741491 Msa0006740:CDS 60.0%
! TGTGCCGGTGTTGGGGATCA+AGG - chr1_1:9741479-9741498 Msa0006740:CDS 60.0%
GCCTCGGAGCTCTCAAGCAA+TGG + chr1_1:9742148-9742167 None:intergenic 60.0%
TTGCTTGAGAGCTCCGAGGC+TGG - chr1_1:9742148-9742167 Msa0006740:CDS 60.0%
CAGGGCTGCTATCCCGGAAT+CGG + chr1_1:9742368-9742387 None:intergenic 60.0%
GGCCAAGGCCCTCGAAAACA+AGG + chr1_1:9743060-9743079 None:intergenic 60.0%
! ATAACTTGCCGCCACGGCCA+AGG + chr1_1:9743075-9743094 None:intergenic 60.0%
CGATTCCGGGATAGCAGCCC+TGG - chr1_1:9742366-9742385 Msa0006740:CDS 65.0%
GTGTGCCAGGGCTGCTATCC+CGG + chr1_1:9742374-9742393 None:intergenic 65.0%
!! GTTTTCGAGGGCCTTGGCCG+TGG - chr1_1:9743061-9743080 Msa0006740:five_prime_UTR 65.0%
TTCGAGGGCCTTGGCCGTGG+CGG - chr1_1:9743064-9743083 Msa0006740:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 9739716 9743360 9739716 ID=Msa0006740;Name=Msa0006740
chr1_1 mRNA 9739716 9743360 9739716 ID=Msa0006740-mRNA-1;Parent=Msa0006740;Name=Msa0006740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=342|1|1|1|0|0.5|2|778|643
chr1_1 exon 9739716 9742400 9739716 ID=Msa0006740-mRNA-1:exon:3473;Parent=Msa0006740-mRNA-1
chr1_1 exon 9742994 9743360 9742994 ID=Msa0006740-mRNA-1:exon:3472;Parent=Msa0006740-mRNA-1
chr1_1 five_prime_UTR 9743019 9743360 9743019 ID=Msa0006740-mRNA-1:five_prime_utr;Parent=Msa0006740-mRNA-1
chr1_1 CDS 9742994 9743018 9742994 ID=Msa0006740-mRNA-1:cds;Parent=Msa0006740-mRNA-1
chr1_1 CDS 9740494 9742400 9740494 ID=Msa0006740-mRNA-1:cds;Parent=Msa0006740-mRNA-1
chr1_1 three_prime_UTR 9739716 9740493 9739716 ID=Msa0006740-mRNA-1:three_prime_utr;Parent=Msa0006740-mRNA-1
Gene Sequence

>Msa0006740

ATGTCTCAAGTCTTCGGCTTTTCTGGTGATAGCTTTTGCCATGGTGGGTTATACACAAACCCCAAGGAAGCAAATTTCTTCCTGTCTCTTGGCCCTCAAGTTGATGTCTACTATCCACCTCAGAAGAGATCACGTGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTTGAGCAGAAGCAGAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAAAGGAGTGCATCTGCTTGTGTTTCCAAACGCTGGCTTATGCTTCTGAGCAATATTTGCAAGAGTGAAATCTGTAGCAACAAAAGTACCTCCTCAAATGACGAGAATAAAATGGATAGTGACTGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGAAGCTTGGAAGGAAAGAAGGCAACCGATGTTAGACTTGCTGCTATTGCAGTTGGAACTGCATCACGAGGAGGATTAGGGAAGCTTTCAATCCGTGGAAGCAACTCAGAACGCGGCGTGACAACTCTAGGTCTCAAAGCAGTTGCTAGTGGATGTCCTTCTCTAAAGTCTTTCTCTTTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTTATTGAGATCGCTAATGGATGTCAAAAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCCGACAAGGCTTTAATCGCAGTTGCAAAGAAGTGTCCGACTCTGACCGAGTTATCATTAGAGTCTTGTCCTAGCATTCGCAATGAAGGTCTACAAGCCATTGGAAAGTTCTGCCCAAATCTTAAGGTTATATCTATCAAGGACTGTGCCGGTGTTGGGGATCAAGGAATCGCTGGCCTGTTTTCTTCGACTTCTTTGGTTCTGACAAAGGTGAAGCTTCAAGCACTGGCCGTTTCTGATCTCTCTCTAGCTGTTATTGGACACTATGGCAAAACAGTTACCGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGAGGCTTCTGGGTTATGGGAAATGCTAATGGATTGCATAAACTGAAGTCACTCACAATTGCATCCTGCAGAGGAGTAACCGATGTTGGGATTGAAGCTGTGGGAAAGGGCTGTCCTAATTTGAAAAGCGTACATCTTCATAAGTGTGCATTTCTCTCAGACAACGGATTGATTTCATTCACCAAGGCTGCTATATCACTTGAAAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTTTTTCTATGGTAAGCTGCTTTGGGATCAAGGATCTGGACTTGGAATTGTCACCTGTATCTCATTGTGAATCACTTCGTTCATTATCGATCTGTAACTGCCCTGGATTTGGCAACGCTACCCTTTCTGTACTCGGAAAGTTGTGCCCTCAGCTTCAACAAGTTGAATTAACTGGACTTAAGGGAGTCACAGATGCTGGGTTGCTTCCATTGCTTGAGAGCTCCGAGGCTGGTCTTGTTAAAGTTAATCTCAGTGGTTGCATCAATCTTACCGACAAAGTAGTTTCATCCCTGGTCAATCTGCATGGTTGGACTCTCGAAATTCTGAACCTTGAAGGTTGTAAAAATATCAGCAATGCTAGCTTGATTGCAATTGCTGAGCATTGCCAATTGCTTTGTGATCTTGATGTTTCCTTGTGTGCGATCTCCGATTCCGGGATAGCAGCCCTGGCACACGCAAAACAGATAAATCTACAGATTCTTTCTCTGTCAGGCTGCACTTTGGTTACGGACAGGAGCTTACCCGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTAAATATCCAGCATTGCAATTCAATCAGCAGCAGCGCTGTTGAGATGCTTGTTGAACATCTTTGGAGGTGTGACATCCTTTCCTGA
Protein sequence

>Msa0006740

MSQVFGFSGDSFCHGGLYTNPKEANFFLSLGPQVDVYYPPQKRSRVSVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNICKSEICSNKSTSSNDENKMDSDCEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSERGVTTLGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALIAVAKKCPTLTELSLESCPSIRNEGLQAIGKFCPNLKVISIKDCAGVGDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNANGLHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKAFSMVSCFGIKDLDLELSPVSHCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCINLTDKVVSSLVNLHGWTLEILNLEGCKNISNASLIAIAEHCQLLCDLDVSLCAISDSGIAALAHAKQINLQILSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSAVEMLVEHLWRCDILS*