Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109740 | XP_013467061.1 | 99.224 | 773 | 5 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109740 | sp|Q8S403|PHO1_ARATH | 65.992 | 791 | 241 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109740 | A0A072VHJ2 | 99.224 | 773 | 5 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1597 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015580 | Msa0109740 | 0.927479 | 1.109587e-91 | -8.615850e-47 |
| Msa0109740 | Msa0156060 | 0.945381 | 3.395790e-104 | -8.615850e-47 |
| Msa0109740 | Msa0156100 | 0.935547 | 7.139658e-97 | -8.615850e-47 |
| Msa0109740 | Msa0272600 | 0.810488 | 1.124208e-50 | -8.615850e-47 |
| Msa0109740 | Msa0312810 | 0.801036 | 1.088160e-48 | -8.615850e-47 |
| Msa0109740 | Msa0931750 | 0.806852 | 6.725571e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109740 | MtrunA17_Chr1g0166651 | 99.224 | 773 | 5 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1597 |
| Msa0109740 | MtrunA17_Chr1g0187381 | 77.320 | 776 | 166 | 4 | 1 | 771 | 54 | 824 | 0.0 | 1241 |
| Msa0109740 | MtrunA17_Chr8g0368741 | 46.447 | 788 | 396 | 7 | 1 | 771 | 1 | 779 | 0.0 | 710 |
| Msa0109740 | MtrunA17_Chr5g0417841 | 32.650 | 781 | 482 | 11 | 4 | 771 | 3 | 752 | 4.57e-145 | 444 |
| Msa0109740 | MtrunA17_Chr2g0302531 | 34.724 | 815 | 469 | 21 | 2 | 772 | 1 | 796 | 2.11e-144 | 443 |
| Msa0109740 | MtrunA17_Chr7g0217801 | 33.881 | 791 | 492 | 14 | 2 | 772 | 1 | 780 | 1.08e-139 | 431 |
| Msa0109740 | MtrunA17_Chr7g0217771 | 39.205 | 352 | 204 | 5 | 429 | 772 | 1 | 350 | 2.49e-80 | 261 |
| Msa0109740 | MtrunA17_Chr7g0217821 | 35.977 | 353 | 216 | 5 | 429 | 772 | 1 | 352 | 4.85e-71 | 236 |
| Msa0109740 | MtrunA17_Chr7g0217831 | 32.487 | 394 | 234 | 11 | 2 | 380 | 1 | 377 | 1.55e-46 | 170 |
| Msa0109740 | MtrunA17_Chr7g0246941 | 29.446 | 343 | 207 | 14 | 424 | 747 | 76 | 402 | 4.45e-31 | 127 |
| Msa0109740 | MtrunA17_Chr2g0322931 | 27.419 | 372 | 233 | 13 | 404 | 754 | 91 | 446 | 2.12e-29 | 122 |
| Msa0109740 | MtrunA17_Chr7g0217781 | 32.143 | 196 | 115 | 3 | 188 | 380 | 7 | 187 | 3.21e-24 | 100 |
| Msa0109740 | MtrunA17_Chr7g0217791 | 32.895 | 152 | 93 | 5 | 2 | 145 | 1 | 151 | 2.26e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109740 | AT3G23430.1 | 65.992 | 791 | 241 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1058 |
| Msa0109740 | AT1G68740.1 | 46.809 | 799 | 383 | 11 | 1 | 772 | 1 | 784 | 0.0 | 684 |
| Msa0109740 | AT1G68740.2 | 45.068 | 730 | 359 | 11 | 1 | 703 | 1 | 715 | 0.0 | 585 |
| Msa0109740 | AT3G29060.1 | 32.527 | 827 | 463 | 13 | 2 | 767 | 1 | 793 | 1.03e-146 | 449 |
| Msa0109740 | AT1G35350.1 | 34.610 | 783 | 464 | 15 | 2 | 771 | 1 | 748 | 1.67e-144 | 442 |
| Msa0109740 | AT1G26730.1 | 34.363 | 777 | 460 | 14 | 2 | 765 | 1 | 740 | 2.24e-144 | 442 |
| Msa0109740 | AT1G14040.1 | 31.879 | 825 | 496 | 15 | 2 | 772 | 1 | 813 | 4.07e-143 | 441 |
| Msa0109740 | AT4G25350.1 | 32.991 | 779 | 479 | 10 | 2 | 772 | 1 | 744 | 3.33e-139 | 428 |
| Msa0109740 | AT1G69480.2 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.76e-138 | 426 |
| Msa0109740 | AT1G69480.1 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.76e-138 | 426 |
| Msa0109740 | AT2G03260.1 | 31.779 | 815 | 499 | 10 | 2 | 771 | 1 | 803 | 2.42e-136 | 423 |
| Msa0109740 | AT2G03240.1 | 33.094 | 837 | 476 | 18 | 2 | 771 | 1 | 820 | 2.76e-135 | 421 |
| Msa0109740 | AT1G35350.2 | 39.764 | 508 | 300 | 4 | 268 | 771 | 59 | 564 | 1.57e-127 | 392 |
| Msa0109740 | AT2G03260.2 | 39.038 | 520 | 295 | 6 | 267 | 771 | 78 | 590 | 6.30e-124 | 384 |
| Msa0109740 | AT1G26730.2 | 31.755 | 718 | 440 | 14 | 2 | 706 | 1 | 681 | 3.02e-112 | 357 |
| Msa0109740 | AT2G03250.1 | 30.601 | 732 | 446 | 20 | 2 | 707 | 1 | 696 | 4.94e-98 | 320 |
| Msa0109740 | AT2G03250.2 | 29.791 | 621 | 382 | 16 | 2 | 604 | 1 | 585 | 3.31e-73 | 250 |
| Msa0109740 | AT2G32295.1 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.36e-29 | 123 |
| Msa0109740 | AT2G32295.2 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.36e-29 | 123 |
| Msa0109740 | AT5G35730.1 | 26.822 | 343 | 216 | 13 | 424 | 747 | 102 | 428 | 1.29e-27 | 117 |
Find 147 sgRNAs with CRISPR-Local
Find 518 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTGTGCATCTTCTTCTT+AGG | 0.158333 | 1_3:-21815594 | Msa0109740:CDS |
| CTTCATACCTGAATGATATT+TGG | 0.178770 | 1_3:+21822964 | None:intergenic |
| TCTCTTGTTTCCTATAAAAT+TGG | 0.193619 | 1_3:+21821357 | None:intergenic |
| ATGAAATTTACCTTATAAAA+TGG | 0.199099 | 1_3:+21815217 | None:intergenic |
| ATCTCTAAGCCATGCATTTC+TGG | 0.202156 | 1_3:+21814493 | None:intergenic |
| TTGGGAGCTTGTTCTTCTTT+AGG | 0.202238 | 1_3:+21823066 | None:intergenic |
| AGCAAAGTGCTTTGTGAATA+TGG | 0.240631 | 1_3:+21816814 | None:intergenic |
| CTTCCAGAATGACAAGTTTC+AGG | 0.243384 | 1_3:+21814881 | None:intergenic |
| ATGACTTTGTATACAACTTT+TGG | 0.258446 | 1_3:-21813507 | Msa0109740:three_prime_UTR |
| AAACCGAATCGAATCGAAAA+TGG | 0.266596 | 1_3:+21823026 | None:intergenic |
| ACAAATGCATCTTTCCATTC+TGG | 0.268062 | 1_3:+21823141 | None:intergenic |
| TAACACTGAGCCAGCTTATA+TGG | 0.270583 | 1_3:-21816288 | Msa0109740:CDS |
| GAAGATTGTAAATGTCAATT+TGG | 0.284176 | 1_3:-21813411 | Msa0109740:three_prime_UTR |
| AGAATTTCTGTTAGCTTCAT+TGG | 0.286639 | 1_3:-21813932 | Msa0109740:CDS |
| GATCAAAGCTCAAATTATTC+AGG | 0.296286 | 1_3:-21821194 | Msa0109740:intron |
| TTGGCCTTCTCAAAACTTAC+AGG | 0.301447 | 1_3:-21819102 | Msa0109740:intron |
| CATCCCTGGAATTCTTCTTC+TGG | 0.305890 | 1_3:-21815539 | Msa0109740:intron |
| TACATTGTATCAATTGTATT+GGG | 0.320853 | 1_3:-21814552 | Msa0109740:CDS |
| CACCAAATCCTCCCACAAAA+TGG | 0.322606 | 1_3:+21819228 | None:intergenic |
| TATACAAAGTCATAATTTCT+AGG | 0.335003 | 1_3:+21813517 | None:intergenic |
| TTGTAGCCTTCCACATGTAT+AGG | 0.342705 | 1_3:+21815722 | None:intergenic |
| CTCTCAAACATAGAGAAATA+TGG | 0.343344 | 1_3:-21823199 | Msa0109740:exon |
| GATACCATTGCTAAGGCATT+TGG | 0.344575 | 1_3:-21814951 | Msa0109740:CDS |
| TGACTCTGATGTTGCACATT+TGG | 0.345973 | 1_3:-21814687 | Msa0109740:CDS |
| CATCCTGAAACTTGTCATTC+TGG | 0.357319 | 1_3:-21814884 | Msa0109740:CDS |
| TGTAAAGAGGAATATGTTAT+AGG | 0.363657 | 1_3:+21823258 | None:intergenic |
| CATCTTCTTCTTAGGGCTGC+AGG | 0.364468 | 1_3:-21815586 | Msa0109740:CDS |
| GCTAGATGAAGAGCTTAATA+AGG | 0.366604 | 1_3:-21821384 | Msa0109740:CDS |
| CTACATTGTATCAATTGTAT+TGG | 0.370636 | 1_3:-21814553 | Msa0109740:CDS |
| GCCTTTGTTGGTGTGGTGGC+TGG | 0.373706 | 1_3:+21819268 | None:intergenic |
| GGTTGTGCATCTTCTTCTTA+GGG | 0.381083 | 1_3:-21815593 | Msa0109740:CDS |
| GGGCGATAGAATATATCTAA+TGG | 0.382429 | 1_3:+21815286 | None:intergenic |
| AGTCTACACTTGTTCATGTA+TGG | 0.384683 | 1_3:-21815751 | Msa0109740:CDS |
| CTAACCAGAAGAAGAATTCC+AGG | 0.386872 | 1_3:+21815535 | None:intergenic |
| ATATAAGCTGGCTCAGTGTT+AGG | 0.387839 | 1_3:+21816290 | None:intergenic |
| GACTGCTGTGGTTGGGTCAA+TGG | 0.390307 | 1_3:-21815614 | Msa0109740:CDS |
| CATATGGTCACCTTCTTTGT+CGG | 0.390777 | 1_3:-21816734 | Msa0109740:intron |
| TGAGAGAAAGTAGGTGAAGT+AGG | 0.393294 | 1_3:+21823216 | None:intergenic |
| TAACAAACCAAATATCATTC+AGG | 0.396672 | 1_3:-21822971 | Msa0109740:intron |
| ACCCTTTCGTGATGCAGATT+CGG | 0.399651 | 1_3:-21813691 | Msa0109740:CDS |
| GGAGTAGCCAAAGTCTCCTT+TGG | 0.403059 | 1_3:+21823047 | None:intergenic |
| AGCCATGCATTTCTGGAGTT+AGG | 0.404681 | 1_3:+21814500 | None:intergenic |
| TCTAACAACCTTGTTTGAAC+AGG | 0.405992 | 1_3:+21813952 | None:intergenic |
| ATGAAAGGTTGTTAGACTAA+TGG | 0.409132 | 1_3:-21816849 | Msa0109740:intron |
| GTTGAACTCTATAAAGGCCT+TGG | 0.409693 | 1_3:-21819121 | Msa0109740:CDS |
| CTAAGGCATTTGGAGACAAC+TGG | 0.410888 | 1_3:-21814941 | Msa0109740:CDS |
| GGCAATGTTGATGCCATCCC+TGG | 0.418502 | 1_3:-21815553 | Msa0109740:CDS |
| GAGCATATACTACATGTCTA+TGG | 0.419044 | 1_3:-21814450 | Msa0109740:intron |
| AATAACTTGCAGAAGCTGTT+TGG | 0.419783 | 1_3:+21817034 | None:intergenic |
| TGGCAGCTCACTAAATATAG+TGG | 0.425101 | 1_3:-21817513 | Msa0109740:intron |
| GAGAGAAAGTAGGTGAAGTA+GGG | 0.425778 | 1_3:+21823217 | None:intergenic |
| CAAGCTCCCAAAGGAGACTT+TGG | 0.433450 | 1_3:-21823054 | Msa0109740:CDS |
| AGAAAGTAGGTGAAGTAGGG+GGG | 0.438666 | 1_3:+21823220 | None:intergenic |
| GGCGATAGAATATATCTAAT+GGG | 0.443564 | 1_3:+21815287 | None:intergenic |
| TTCTTTACAGGGTTATGTAC+AGG | 0.444953 | 1_3:-21816374 | Msa0109740:intron |
| GAATAATTTGAGCTTTGATC+GGG | 0.445025 | 1_3:+21821197 | None:intergenic |
| ATCTCGGCGTTGGAATTTCT+CGG | 0.447193 | 1_3:+21821233 | None:intergenic |
| AAGCAGTCTACCCTGTCTTC+AGG | 0.450330 | 1_3:-21816265 | Msa0109740:intron |
| TAAAAGATGCGCATTGCAAA+TGG | 0.466249 | 1_3:-21813547 | Msa0109740:three_prime_UTR |
| ACAGCCGTTATAGCCTTTGT+TGG | 0.466698 | 1_3:+21819256 | None:intergenic |
| AAATTCAGAAACATCACAAA+TGG | 0.467434 | 1_3:-21819398 | Msa0109740:CDS |
| CACACCAACAAAGGCTATAA+CGG | 0.472144 | 1_3:-21819260 | Msa0109740:CDS |
| GTGTCTGCAATGGTTGCAGC+CGG | 0.472477 | 1_3:-21814647 | Msa0109740:CDS |
| GTGAATAGTCCTATAAAAGA+AGG | 0.475341 | 1_3:-21819208 | Msa0109740:CDS |
| CTATGCTTTAGTGCTGTGCT+TGG | 0.483927 | 1_3:+21815667 | None:intergenic |
| GAGGGCATTGGAATTTCTAC+AGG | 0.486316 | 1_3:-21813897 | Msa0109740:intron |
| TGAATAATTTGAGCTTTGAT+CGG | 0.488297 | 1_3:+21821196 | None:intergenic |
| TATTCATGACTGCTGTGGTT+GGG | 0.496288 | 1_3:-21815621 | Msa0109740:CDS |
| TCTGCATCACGAAAGGGTAA+TGG | 0.496655 | 1_3:+21813696 | None:intergenic |
| TAGATGTTGTACCTGAAGAC+AGG | 0.498885 | 1_3:+21816254 | None:intergenic |
| GGCTGATCAACTTACTAGCC+AGG | 0.504259 | 1_3:-21815073 | Msa0109740:intron |
| GAGTAGCCAAAGTCTCCTTT+GGG | 0.508035 | 1_3:+21823048 | None:intergenic |
| ACGAGAGAAAATCTCGGCGT+TGG | 0.512373 | 1_3:+21821223 | None:intergenic |
| CTCTATGTTTGAGAGAAAGT+AGG | 0.513312 | 1_3:+21823207 | None:intergenic |
| GTATTCATGACTGCTGTGGT+TGG | 0.517470 | 1_3:-21815622 | Msa0109740:CDS |
| CATTGGAGGTTATTAGAAGA+GGG | 0.518967 | 1_3:-21813915 | Msa0109740:CDS |
| ATTTCTGTTAGCTTCATTGG+AGG | 0.519416 | 1_3:-21813929 | Msa0109740:CDS |
| TGAGAACCTTTCTGCACTTG+AGG | 0.521867 | 1_3:+21816755 | None:intergenic |
| AGTGCAGAAAGGTTCTCATA+TGG | 0.524689 | 1_3:-21816750 | Msa0109740:CDS |
| GAAAGTAGGTGAAGTAGGGG+GGG | 0.526768 | 1_3:+21823221 | None:intergenic |
| TGTTGCACATTTGGCTAACA+TGG | 0.528897 | 1_3:-21814678 | Msa0109740:CDS |
| TCATTCTGGAAGATTATACA+TGG | 0.529538 | 1_3:-21814870 | Msa0109740:CDS |
| GAGAAAGTAGGTGAAGTAGG+GGG | 0.530029 | 1_3:+21823219 | None:intergenic |
| TCCGAATCTGCATCACGAAA+GGG | 0.530756 | 1_3:+21813690 | None:intergenic |
| TGTCTGCAATGGTTGCAGCC+GGG | 0.531098 | 1_3:-21814646 | Msa0109740:CDS |
| GATGGAGGATAGTGAAGAAG+AGG | 0.531469 | 1_3:-21821471 | Msa0109740:CDS |
| ATCCGAATCTGCATCACGAA+AGG | 0.533826 | 1_3:+21813689 | None:intergenic |
| AGTCCTATAAAAGAAGGGTA+TGG | 0.535476 | 1_3:-21819202 | Msa0109740:CDS |
| GGGATGGCATCAACATTGCC+CGG | 0.536864 | 1_3:+21815556 | None:intergenic |
| AGAGAGTGAGTTTCTTGAGA+GGG | 0.543146 | 1_3:-21821339 | Msa0109740:CDS |
| TGTTAGACTAATGGATGAAG+TGG | 0.544462 | 1_3:-21816840 | Msa0109740:CDS |
| CGGATGAAGCAGAAACGAGT+TGG | 0.546512 | 1_3:+21815265 | None:intergenic |
| TTAAAACCTCAAGTGCAGAA+AGG | 0.546793 | 1_3:-21816761 | Msa0109740:CDS |
| GGATGAAGCAGAAACGAGTT+GGG | 0.549629 | 1_3:+21815266 | None:intergenic |
| AGGTTATTAGAAGAGGGCAT+TGG | 0.550858 | 1_3:-21813909 | Msa0109740:CDS |
| TTAAACAACTTCTCACTGAC+CGG | 0.552571 | 1_3:-21821277 | Msa0109740:CDS |
| GCCGGGGCTAGAGTAACATA+TGG | 0.552597 | 1_3:-21814629 | Msa0109740:CDS |
| CTAGGTGAGGAGGAAAATGA+TGG | 0.553948 | 1_3:-21821489 | Msa0109740:intron |
| TAGACTGCTTCCATATAAGC+TGG | 0.554839 | 1_3:+21816278 | None:intergenic |
| AAGCTCAACTAATACCAGAA+TGG | 0.558338 | 1_3:-21823155 | Msa0109740:CDS |
| AGAGAAAGTAGGTGAAGTAG+GGG | 0.560209 | 1_3:+21823218 | None:intergenic |
| CGTTATAGCCTTTGTTGGTG+TGG | 0.564522 | 1_3:+21819261 | None:intergenic |
| GAAGTTATTACCGACAAAGA+AGG | 0.566027 | 1_3:+21816724 | None:intergenic |
| ATTACTACAGGTTCTTCTAG+TGG | 0.568364 | 1_3:-21815106 | Msa0109740:intron |
| GTCTGCAATGGTTGCAGCCG+GGG | 0.570056 | 1_3:-21814645 | Msa0109740:CDS |
| AAGTGGGGCCTGTTCAAACA+AGG | 0.571452 | 1_3:-21813960 | Msa0109740:CDS |
| TGTGATAATCACTTCTGTGA+TGG | 0.578841 | 1_3:-21814576 | Msa0109740:CDS |
| GAGAGTGAGTTTCTTGAGAG+GGG | 0.579909 | 1_3:-21821338 | Msa0109740:CDS |
| GACTGTCATGCACTTCAAAG+TGG | 0.581782 | 1_3:-21813977 | Msa0109740:CDS |
| TCATTGGAGGTTATTAGAAG+AGG | 0.582043 | 1_3:-21813916 | Msa0109740:CDS |
| AACGAGCATCTAAACAATGT+TGG | 0.586936 | 1_3:-21813744 | Msa0109740:CDS |
| ATCCTAACTCCAGAAATGCA+TGG | 0.587354 | 1_3:-21814502 | Msa0109740:CDS |
| TCCAGCCACCACACCAACAA+AGG | 0.591128 | 1_3:-21819269 | Msa0109740:CDS |
| TATAGCCTTTGTTGGTGTGG+TGG | 0.591860 | 1_3:+21819264 | None:intergenic |
| GTCTCCAAATGCCTTAGCAA+TGG | 0.595254 | 1_3:+21814947 | None:intergenic |
| GGGCTAGAGTAACATATGGC+AGG | 0.598969 | 1_3:-21814625 | Msa0109740:CDS |
| ACTGTCATGCACTTCAAAGT+GGG | 0.599916 | 1_3:-21813976 | Msa0109740:CDS |
| CACTGTATTCATGACTGCTG+TGG | 0.600052 | 1_3:-21815626 | Msa0109740:CDS |
| TGAATAGTCCTATAAAAGAA+GGG | 0.602645 | 1_3:-21819207 | Msa0109740:CDS |
| GCCATATGTTACTCTAGCCC+CGG | 0.604469 | 1_3:+21814628 | None:intergenic |
| GTATACAGATACCATTGCTA+AGG | 0.606320 | 1_3:-21814958 | Msa0109740:intron |
| TCGTGTTATGCTAGGTGAGG+AGG | 0.606435 | 1_3:-21821499 | Msa0109740:intron |
| CAGAATGACAAGTTTCAGGA+TGG | 0.607771 | 1_3:+21814885 | None:intergenic |
| GATGCAGATTCGGATAATTG+AGG | 0.609576 | 1_3:-21813681 | Msa0109740:exon |
| GGTGAGGAGGAAAATGATGG+AGG | 0.614036 | 1_3:-21821486 | Msa0109740:CDS |
| GCGGATAGAAGAATGTAAAG+AGG | 0.619017 | 1_3:+21823245 | None:intergenic |
| GAGAGAAAATACCACACAAG+TGG | 0.620395 | 1_3:+21816312 | None:intergenic |
| AAATATGGTGAAATTCTCAA+AGG | 0.620764 | 1_3:-21823184 | Msa0109740:exon |
| AAGAGAGTGAGTTTCTTGAG+AGG | 0.626823 | 1_3:-21821340 | Msa0109740:CDS |
| GGGAGAACGAGAGAAAATCT+CGG | 0.628260 | 1_3:+21821217 | None:intergenic |
| ATTACTAGTGTATAAGACGA+TGG | 0.628674 | 1_3:-21814715 | Msa0109740:intron |
| GCAATCTTGGCCCACTTGTG+TGG | 0.629460 | 1_3:-21816323 | Msa0109740:CDS |
| ACATTTCATTAGTTCAGACA+AGG | 0.639364 | 1_3:-21816992 | Msa0109740:intron |
| ATGCAACCTATACATGTGGA+AGG | 0.640304 | 1_3:-21815728 | Msa0109740:CDS |
| CAGAAGAAGAATTCCAGGGA+TGG | 0.644693 | 1_3:+21815540 | None:intergenic |
| GTTGCACATTTGGCTAACAT+GGG | 0.650024 | 1_3:-21814677 | Msa0109740:CDS |
| TTGCACATTTGGCTAACATG+GGG | 0.654335 | 1_3:-21814676 | Msa0109740:CDS |
| AGAGAAAATACCACACAAGT+GGG | 0.657293 | 1_3:+21816313 | None:intergenic |
| AAAGAAGAACAAGCTCCCAA+AGG | 0.658529 | 1_3:-21823063 | Msa0109740:CDS |
| CTGTCATGCACTTCAAAGTG+GGG | 0.659135 | 1_3:-21813975 | Msa0109740:CDS |
| TAACCAGAAGAAGAATTCCA+GGG | 0.669293 | 1_3:+21815536 | None:intergenic |
| AGATGTTGTACCTGAAGACA+GGG | 0.672666 | 1_3:+21816255 | None:intergenic |
| ACATTAAAAGCATACCTGGA+GGG | 0.674727 | 1_3:+21814805 | None:intergenic |
| ATGGATGCAACCTATACATG+TGG | 0.686696 | 1_3:-21815732 | Msa0109740:CDS |
| GGGGAAGTATGTGTCTGCAA+TGG | 0.699297 | 1_3:-21814657 | Msa0109740:CDS |
| AGACTATGTTACGAATAACA+CGG | 0.732001 | 1_3:+21815245 | None:intergenic |
| TCGGCGTTGGAATTTCTCGG+CGG | 0.748932 | 1_3:+21821236 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATATATGTTTTTTTTTA+AGG | - | chr1_3:21814150-21814169 | Msa0109740:intron | 10.0% |
| !!! | TTCTTAATTTTTTTTTGTTA+GGG | + | chr1_3:21815019-21815038 | None:intergenic | 10.0% |
| !!! | TTTCTTAATTTTTTTTTGTT+AGG | + | chr1_3:21815020-21815039 | None:intergenic | 10.0% |
| !!! | TCATGAATAATAATTTTTTT+GGG | + | chr1_3:21815870-21815889 | None:intergenic | 10.0% |
| !!! | TTCATGAATAATAATTTTTT+TGG | + | chr1_3:21815871-21815890 | None:intergenic | 10.0% |
| !!! | TAGCTAAATATTTTTTATTT+GGG | + | chr1_3:21815923-21815942 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTGTTAACATAT+CGG | - | chr1_3:21816299-21816318 | Msa0109740:CDS | 10.0% |
| !! | TATCTTTAAATTTAATATGT+TGG | - | chr1_3:21816551-21816570 | Msa0109740:intron | 10.0% |
| !! | AAAACAAATGATTAATTATT+TGG | + | chr1_3:21816854-21816873 | None:intergenic | 10.0% |
| !!! | TCAAATAAATTTTCTTTTTT+TGG | + | chr1_3:21817769-21817788 | None:intergenic | 10.0% |
| !!! | TTATTTCTTTTTAATTAATG+AGG | - | chr1_3:21817799-21817818 | Msa0109740:intron | 10.0% |
| !! | TTTGTATGATAATATATAAT+TGG | - | chr1_3:21818086-21818105 | Msa0109740:intron | 10.0% |
| !! | TTAAAATTGATAAATGTTAA+CGG | - | chr1_3:21818462-21818481 | Msa0109740:intron | 10.0% |
| !!! | TATATTATTTTGATTATGAA+AGG | - | chr1_3:21819766-21819785 | Msa0109740:intron | 10.0% |
| !!! | TATAATTTTATTTTCTTTAC+AGG | - | chr1_3:21820244-21820263 | Msa0109740:intron | 10.0% |
| !!! | ATAATTTTATTTTCTTTACA+GGG | - | chr1_3:21820245-21820264 | Msa0109740:intron | 10.0% |
| !!! | TTTATTTTTTTGTTGAAAAA+TGG | + | chr1_3:21820447-21820466 | None:intergenic | 10.0% |
| !! | CTGAAAATAAAAATATATTA+GGG | + | chr1_3:21820692-21820711 | None:intergenic | 10.0% |
| !! | ACTGAAAATAAAAATATATT+AGG | + | chr1_3:21820693-21820712 | None:intergenic | 10.0% |
| !!! | TATGAAGTTTATTAGTTTTT+GGG | - | chr1_3:21813682-21813701 | Msa0109740:exon | 15.0% |
| !! | AAACAAAAGAAAAATCATAA+TGG | + | chr1_3:21813764-21813783 | None:intergenic | 15.0% |
| !! | TGAAACTTTATACTATTATT+TGG | + | chr1_3:21813943-21813962 | None:intergenic | 15.0% |
| !!! | TTTTTAATCTATACAAATCA+AGG | + | chr1_3:21814256-21814275 | None:intergenic | 15.0% |
| !!! | TTTTATTGAACTATATAGTT+TGG | + | chr1_3:21814369-21814388 | None:intergenic | 15.0% |
| !!! | TTTAACTTTCTTAATCATTT+GGG | + | chr1_3:21814493-21814512 | None:intergenic | 15.0% |
| !!! | ATTTAACTTTCTTAATCATT+TGG | + | chr1_3:21814494-21814513 | None:intergenic | 15.0% |
| !! | ACTCAAAATATAATTCAAAA+AGG | - | chr1_3:21814792-21814811 | Msa0109740:intron | 15.0% |
| !!! | TTTTTCTACTTTTCTTTTTT+GGG | - | chr1_3:21814884-21814903 | Msa0109740:CDS | 15.0% |
| !! | AGACATATATATTTACATAA+AGG | + | chr1_3:21815629-21815648 | None:intergenic | 15.0% |
| !!! | CATGAATAATAATTTTTTTG+GGG | + | chr1_3:21815869-21815888 | None:intergenic | 15.0% |
| !!! | AGCTAAATATTTTTTATTTG+GGG | + | chr1_3:21815922-21815941 | None:intergenic | 15.0% |
| !!! | GTAGCTAAATATTTTTTATT+TGG | + | chr1_3:21815924-21815943 | None:intergenic | 15.0% |
| !!! | TTCAACAAATAAATTTGTTT+GGG | + | chr1_3:21815947-21815966 | None:intergenic | 15.0% |
| !!! | TTTCAACAAATAAATTTGTT+TGG | + | chr1_3:21815948-21815967 | None:intergenic | 15.0% |
| !!! | TTGTATTAATTTGACAATTT+CGG | - | chr1_3:21816011-21816030 | Msa0109740:intron | 15.0% |
| !!! | CCAATAAATTATAACTTTTT+AGG | + | chr1_3:21816516-21816535 | None:intergenic | 15.0% |
| !! | CCTAAAAAGTTATAATTTAT+TGG | - | chr1_3:21816513-21816532 | Msa0109740:intron | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_3:21816756-21816775 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTCATAAGTGT+TGG | - | chr1_3:21816762-21816781 | Msa0109740:CDS | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_3:21816756-21816775 | None:intergenic | 15.0% |
| !! | TTAGTAAAACTATACAAAAT+TGG | - | chr1_3:21816906-21816925 | Msa0109740:intron | 15.0% |
| !!! | TTTTCTAATCTAATTTGATA+AGG | - | chr1_3:21818178-21818197 | Msa0109740:intron | 15.0% |
| !!! | ATCGAATAAATTATTTTCAT+CGG | + | chr1_3:21818828-21818847 | None:intergenic | 15.0% |
| !!! | TTTAAAATAACCAAATCAAA+TGG | + | chr1_3:21819689-21819708 | None:intergenic | 15.0% |
| !!! | TAATACTTTCTTTTACAAAT+TGG | + | chr1_3:21820015-21820034 | None:intergenic | 15.0% |
| !! | CAAAAATAATATTTCGATAT+GGG | + | chr1_3:21820042-21820061 | None:intergenic | 15.0% |
| !! | TCAAAAATAATATTTCGATA+TGG | + | chr1_3:21820043-21820062 | None:intergenic | 15.0% |
| !!! | AAAATGTCATATCTTATTTT+TGG | + | chr1_3:21820424-21820443 | None:intergenic | 15.0% |
| !! | ATGAAATTTACCTTATAAAA+TGG | + | chr1_3:21821416-21821435 | None:intergenic | 15.0% |
| !!! | ATATAAAATAAGATTTTACC+TGG | + | chr1_3:21821578-21821597 | None:intergenic | 15.0% |
| !! | TTGAAATTATTGTTAGAATT+TGG | - | chr1_3:21822235-21822254 | Msa0109740:intron | 15.0% |
| !!! | AATATTTTATTTAGGCTAAT+CGG | + | chr1_3:21822508-21822527 | None:intergenic | 15.0% |
| !!! | ATTAGCCTAAATAAAATATT+AGG | - | chr1_3:21822508-21822527 | Msa0109740:intron | 15.0% |
| !! | TTAGCCTAAATAAAATATTA+GGG | - | chr1_3:21822509-21822528 | Msa0109740:intron | 15.0% |
| !! | TCACTTTAATTAATCAAAAA+TGG | - | chr1_3:21822581-21822600 | Msa0109740:intron | 15.0% |
| !! | TTCTTAAAACTGAAAAAAAA+AGG | + | chr1_3:21822794-21822813 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATCATTTCAACA+AGG | + | chr1_3:21823174-21823193 | None:intergenic | 15.0% |
| !!! | GTATGAAGTTTATTAGTTTT+TGG | - | chr1_3:21813681-21813700 | Msa0109740:exon | 20.0% |
| !!! | TTTTTGTTTTTGTTGCAATA+AGG | + | chr1_3:21813830-21813849 | None:intergenic | 20.0% |
| !!! | CTTCAATCTTTTATATGATA+TGG | - | chr1_3:21813908-21813927 | Msa0109740:CDS | 20.0% |
| !! | GTAACATATATTTCTTACAA+AGG | - | chr1_3:21814101-21814120 | Msa0109740:intron | 20.0% |
| !! | AATAGTGTAACATAAGTAAT+AGG | + | chr1_3:21814518-21814537 | None:intergenic | 20.0% |
| !!! | TTTTTCATTGGTAGAAAAAA+AGG | + | chr1_3:21814553-21814572 | None:intergenic | 20.0% |
| !!! | TCTTATATTTTATTCACTAG+AGG | + | chr1_3:21814591-21814610 | None:intergenic | 20.0% |
| !! | AAATATAATTCAAAAAGGAG+TGG | - | chr1_3:21814797-21814816 | Msa0109740:intron | 20.0% |
| !! | AAAAAGAAAAGTAGAAAAAG+AGG | + | chr1_3:21814883-21814902 | None:intergenic | 20.0% |
| !!! | CTTTTTCTACTTTTCTTTTT+TGG | - | chr1_3:21814883-21814902 | Msa0109740:CDS | 20.0% |
| !!! | TGATTGAATTTTATTGTCTA+TGG | + | chr1_3:21815076-21815095 | None:intergenic | 20.0% |
| !! | GTTCATAAAAAATTACAAAG+AGG | + | chr1_3:21815486-21815505 | None:intergenic | 20.0% |
| !! | ATTATTATTCATGAATGAGT+CGG | - | chr1_3:21815876-21815895 | Msa0109740:intron | 20.0% |
| !!! | TCAACAAATAAATTTGTTTG+GGG | + | chr1_3:21815946-21815965 | None:intergenic | 20.0% |
| !! | AATAACTTATTTGTTTACGT+TGG | - | chr1_3:21816122-21816141 | Msa0109740:intron | 20.0% |
| !!! | TTAACATATCGGTTAAATTT+AGG | - | chr1_3:21816310-21816329 | Msa0109740:CDS | 20.0% |
| !!! | ATTTTTAAGTTAAGTACCTA+AGG | - | chr1_3:21816367-21816386 | Msa0109740:CDS | 20.0% |
| !! | CTAAAATTAAACAAAACCTT+AGG | + | chr1_3:21816386-21816405 | None:intergenic | 20.0% |
| !!! | GCAAATTTTTACCATAAAAA+AGG | + | chr1_3:21816455-21816474 | None:intergenic | 20.0% |
| !!! | AAAACAAATGATTAGTTAGT+TGG | + | chr1_3:21816730-21816749 | None:intergenic | 20.0% |
| !!! | TTTTGCATGTTAATCATATA+TGG | + | chr1_3:21817157-21817176 | None:intergenic | 20.0% |
| !! | GTAATAAGAAAAATCCATAA+CGG | + | chr1_3:21817185-21817204 | None:intergenic | 20.0% |
| !! | ATATCAACTTTAGCAAAAAA+TGG | - | chr1_3:21817263-21817282 | Msa0109740:intron | 20.0% |
| !! | AAAAAAAGGAAAACCTAAAA+TGG | - | chr1_3:21817322-21817341 | Msa0109740:intron | 20.0% |
| !! | GTGATAGAGATAAAAATATA+CGG | + | chr1_3:21817649-21817668 | None:intergenic | 20.0% |
| !!! | TCAAGACATTTCTATTTTTA+GGG | - | chr1_3:21817906-21817925 | Msa0109740:intron | 20.0% |
| !! | AATATATAATTGGATGACTA+TGG | - | chr1_3:21818096-21818115 | Msa0109740:intron | 20.0% |
| !! | ATATATAATTGGATGACTAT+GGG | - | chr1_3:21818097-21818116 | Msa0109740:intron | 20.0% |
| !! | TTGATAAGGTAGAATAAAAA+TGG | - | chr1_3:21818192-21818211 | Msa0109740:intron | 20.0% |
| !! | TTTATGAGTAGAACAAATAT+TGG | + | chr1_3:21818370-21818389 | None:intergenic | 20.0% |
| !! | TAATTTCCAAAAATAAGAAG+AGG | - | chr1_3:21818582-21818601 | Msa0109740:intron | 20.0% |
| !! | GAATAACACATAATATATGT+AGG | - | chr1_3:21818675-21818694 | Msa0109740:intron | 20.0% |
| !!! | ATTTTAAATGTGAAAAAGTG+AGG | + | chr1_3:21818724-21818743 | None:intergenic | 20.0% |
| !!! | AAAAGTACTTATGGTAATTT+GGG | + | chr1_3:21819057-21819076 | None:intergenic | 20.0% |
| !!! | AAAAAGTACTTATGGTAATT+TGG | + | chr1_3:21819058-21819077 | None:intergenic | 20.0% |
| !!! | CTTATGAAAAAAAGTACTTA+TGG | + | chr1_3:21819066-21819085 | None:intergenic | 20.0% |
| !!! | TAACAACATTCTATTGTTTT+TGG | - | chr1_3:21819097-21819116 | Msa0109740:intron | 20.0% |
| !! | TTATTCATGCAAACTATATT+GGG | + | chr1_3:21819339-21819358 | None:intergenic | 20.0% |
| !! | TTTATTCATGCAAACTATAT+TGG | + | chr1_3:21819340-21819359 | None:intergenic | 20.0% |
| !! | AAGTTTACTTTACTTTCATT+TGG | + | chr1_3:21819365-21819384 | None:intergenic | 20.0% |
| !! | CTATGTCTATATTAGTAAAT+TGG | - | chr1_3:21819942-21819961 | Msa0109740:intron | 20.0% |
| !! | GACCAAACTTTAAATTATTA+TGG | - | chr1_3:21820083-21820102 | Msa0109740:intron | 20.0% |
| !!! | GACCATAATAATTTAAAGTT+TGG | + | chr1_3:21820088-21820107 | None:intergenic | 20.0% |
| !! | ATCAATTAAGGTTTAATGTA+TGG | + | chr1_3:21820222-21820241 | None:intergenic | 20.0% |
| !! | TCAATTTATGTGTAGTTTAA+TGG | + | chr1_3:21820753-21820772 | None:intergenic | 20.0% |
| !! | ATAATAACTGTACTAATGAA+TGG | - | chr1_3:21820819-21820838 | Msa0109740:intron | 20.0% |
| !! | AAATAGAACGAAACTAAAAA+TGG | - | chr1_3:21821124-21821143 | Msa0109740:intron | 20.0% |
| !! | TGAAAAACTGCAAAAATAAA+CGG | + | chr1_3:21821307-21821326 | None:intergenic | 20.0% |
| !! | TGATTTAATATCATTACTAC+AGG | - | chr1_3:21821512-21821531 | Msa0109740:intron | 20.0% |
| !!! | TCAACATTTTTACTATTTCA+TGG | - | chr1_3:21821650-21821669 | Msa0109740:intron | 20.0% |
| !! | TACATTGTATCAATTGTATT+GGG | - | chr1_3:21822078-21822097 | Msa0109740:intron | 20.0% |
| !!! | ATATTTTATTTAGGCTAATC+GGG | + | chr1_3:21822507-21822526 | None:intergenic | 20.0% |
| !!! | ACAACCCTAATATTTTATTT+AGG | + | chr1_3:21822516-21822535 | None:intergenic | 20.0% |
| !! | AATTAATCAAAAATGGACAT+TGG | - | chr1_3:21822588-21822607 | Msa0109740:intron | 20.0% |
| !! | TATACAAAGTCATAATTTCT+AGG | + | chr1_3:21823116-21823135 | None:intergenic | 20.0% |
| ! | TGTAAAGAGGAATATGTTAT+AGG | + | chr1_3:21813375-21813394 | None:intergenic | 25.0% |
| ! | AAATATGGTGAAATTCTCAA+AGG | - | chr1_3:21813446-21813465 | Msa0109740:three_prime_UTR | 25.0% |
| ! | TAACAAACCAAATATCATTC+AGG | - | chr1_3:21813659-21813678 | Msa0109740:three_prime_UTR | 25.0% |
| ! | TCAAGACAATGAAATGAAAA+TGG | - | chr1_3:21813871-21813890 | Msa0109740:intron | 25.0% |
| !! | AAAAGATTGAAGAAAAGTGT+TGG | + | chr1_3:21813900-21813919 | None:intergenic | 25.0% |
| ! | ACTTGAACGATTAATCTTTA+TGG | + | chr1_3:21814412-21814431 | None:intergenic | 25.0% |
| !!! | ATGAATGAGTGTTTTTTCAT+TGG | + | chr1_3:21814565-21814584 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr1_3:21814715-21814734 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr1_3:21814728-21814747 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr1_3:21814727-21814746 | Msa0109740:intron | 25.0% |
| !! | TACCATTAAAGTTAGTTTAG+TGG | - | chr1_3:21814842-21814861 | Msa0109740:CDS | 25.0% |
| !!! | AGAAAAAGAGGTTTTAGAAA+AGG | + | chr1_3:21814871-21814890 | None:intergenic | 25.0% |
| !! | ATAAGGTGAACCAATTTTAT+AGG | - | chr1_3:21815263-21815282 | Msa0109740:CDS | 25.0% |
| !! | TCTCTTGTTTCCTATAAAAT+TGG | + | chr1_3:21815276-21815295 | None:intergenic | 25.0% |
| !! | TGAATAATTTGAGCTTTGAT+CGG | + | chr1_3:21815437-21815456 | None:intergenic | 25.0% |
| !!! | AAAATTTTGATTTGCTTCGT+TGG | + | chr1_3:21815681-21815700 | None:intergenic | 25.0% |
| ! | ATTTCGATAACAACAACTTA+AGG | + | chr1_3:21816410-21816429 | None:intergenic | 25.0% |
| !!! | CTAAAAACACTCCTTTTTTA+TGG | - | chr1_3:21816441-21816460 | Msa0109740:intron | 25.0% |
| ! | GGTAAAACTATACAAATTTG+TGG | - | chr1_3:21816783-21816802 | Msa0109740:CDS | 25.0% |
| ! | ACTATACAAAATTGGATCTT+TGG | - | chr1_3:21816914-21816933 | Msa0109740:intron | 25.0% |
| !! | GTATGGAAATTGTATTTCTA+AGG | - | chr1_3:21817009-21817028 | Msa0109740:CDS | 25.0% |
| !! | AAAATTTTGTTCACGTGATA+TGG | - | chr1_3:21817116-21817135 | Msa0109740:intron | 25.0% |
| ! | AAATTCAGAAACATCACAAA+TGG | - | chr1_3:21817232-21817251 | Msa0109740:intron | 25.0% |
| !! | ATTTTGTTAATTCAGCAACA+AGG | - | chr1_3:21817291-21817310 | Msa0109740:intron | 25.0% |
| !! | TTTTGTTAATTCAGCAACAA+GGG | - | chr1_3:21817292-21817311 | Msa0109740:intron | 25.0% |
| ! | TGAATAGTCCTATAAAAGAA+GGG | - | chr1_3:21817423-21817442 | Msa0109740:intron | 25.0% |
| !!! | GTCAAGACATTTCTATTTTT+AGG | - | chr1_3:21817905-21817924 | Msa0109740:intron | 25.0% |
| ! | CATGATTGGATCAATTAAAT+TGG | + | chr1_3:21817953-21817972 | None:intergenic | 25.0% |
| ! | TTTCATCCATAATATTGAAG+TGG | + | chr1_3:21818248-21818267 | None:intergenic | 25.0% |
| !!! | TTTTCTCCTCTTCTTATTTT+TGG | + | chr1_3:21818591-21818610 | None:intergenic | 25.0% |
| ! | ATTGAGGTGTATAAGTAAAA+AGG | - | chr1_3:21818615-21818634 | Msa0109740:intron | 25.0% |
| ! | TTTAGATATTGAACAATCTG+AGG | + | chr1_3:21818782-21818801 | None:intergenic | 25.0% |
| ! | AAGGAATTACAAATACGTAA+AGG | + | chr1_3:21819032-21819051 | None:intergenic | 25.0% |
| !! | TTTTAGTGTACCATTTGATT+TGG | - | chr1_3:21819676-21819695 | Msa0109740:intron | 25.0% |
| ! | TAGAGTGTATAATGATTATG+TGG | - | chr1_3:21819715-21819734 | Msa0109740:intron | 25.0% |
| !!! | TTATGTGGTTTTGCAATAAT+TGG | - | chr1_3:21819730-21819749 | Msa0109740:intron | 25.0% |
| ! | TAGACATAGATTTGATATAG+TGG | + | chr1_3:21819931-21819950 | None:intergenic | 25.0% |
| !! | TAATTTAAAGTTTGGTCGTT+AGG | + | chr1_3:21820080-21820099 | None:intergenic | 25.0% |
| !! | GGTTTTTAAATGAAAGAGTT+AGG | + | chr1_3:21820591-21820610 | None:intergenic | 25.0% |
| ! | ATGTGTTAAATTGAAGAGTT+AGG | - | chr1_3:21820623-21820642 | Msa0109740:intron | 25.0% |
| ! | GTTTGACATTATAATCTCAA+AGG | + | chr1_3:21821218-21821237 | None:intergenic | 25.0% |
| !! | TAATGTCAAACTTTTATCAC+TGG | - | chr1_3:21821227-21821246 | Msa0109740:CDS | 25.0% |
| !!! | CATACATTTTTTGAAGCAAT+TGG | - | chr1_3:21821433-21821452 | Msa0109740:CDS | 25.0% |
| !!! | TCTCATTTTTGCCATATTTT+TGG | - | chr1_3:21821798-21821817 | Msa0109740:intron | 25.0% |
| ! | CTACATTGTATCAATTGTAT+TGG | - | chr1_3:21822077-21822096 | Msa0109740:intron | 25.0% |
| !!! | AGTATATGCTCTTATTTTTC+AGG | + | chr1_3:21822171-21822190 | None:intergenic | 25.0% |
| ! | TCAATACTTAGATTAGAAAG+AGG | + | chr1_3:21822219-21822238 | None:intergenic | 25.0% |
| !! | TTATTGTTAGAATTTGGCTT+CGG | - | chr1_3:21822241-21822260 | Msa0109740:intron | 25.0% |
| !!! | ATTCTAAAATACGTTCAATC+GGG | + | chr1_3:21822279-21822298 | None:intergenic | 25.0% |
| !!! | CATTCTAAAATACGTTCAAT+CGG | + | chr1_3:21822280-21822299 | None:intergenic | 25.0% |
| !!! | GATTGAACGTATTTTAGAAT+GGG | - | chr1_3:21822279-21822298 | Msa0109740:intron | 25.0% |
| !!! | CAAATGTTTTGACAAATGTT+GGG | + | chr1_3:21822339-21822358 | None:intergenic | 25.0% |
| !!! | TCAAATGTTTTGACAAATGT+TGG | + | chr1_3:21822340-21822359 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGCGTGATTTTTT+AGG | + | chr1_3:21822464-21822483 | None:intergenic | 25.0% |
| !! | CAAAAACAACTGTATCTTTT+TGG | - | chr1_3:21822475-21822494 | Msa0109740:intron | 25.0% |
| ! | ATAAAATATTAGGGTTGTGT+CGG | - | chr1_3:21822518-21822537 | Msa0109740:intron | 25.0% |
| !!! | TTTTTTCTCAACATGTCTAT+AGG | + | chr1_3:21823002-21823021 | None:intergenic | 25.0% |
| !! | ATGACTTTGTATACAACTTT+TGG | - | chr1_3:21823123-21823142 | Msa0109740:CDS | 25.0% |
| ! | GAAGATTGTAAATGTCAATT+TGG | - | chr1_3:21823219-21823238 | Msa0109740:five_prime_UTR | 25.0% |
| CTCTCAAACATAGAGAAATA+TGG | - | chr1_3:21813431-21813450 | Msa0109740:three_prime_UTR | 30.0% | |
| CTTCATACCTGAATGATATT+TGG | + | chr1_3:21813669-21813688 | None:intergenic | 30.0% | |
| ! | TTGTTGTTCTGTAACATGTT+AGG | - | chr1_3:21813715-21813734 | Msa0109740:CDS | 30.0% |
| TGTTGTTCTGTAACATGTTA+GGG | - | chr1_3:21813716-21813735 | Msa0109740:CDS | 30.0% | |
| TAATGAAGCCATGAATGAAA+GGG | + | chr1_3:21814053-21814072 | None:intergenic | 30.0% | |
| TGTTAGCAACAATATACATC+CGG | - | chr1_3:21814188-21814207 | Msa0109740:intron | 30.0% | |
| TTTACAATAACACCATCAGA+TGG | - | chr1_3:21814285-21814304 | Msa0109740:intron | 30.0% | |
| ATCAGATGGTACAAAATTCA+CGG | - | chr1_3:21814299-21814318 | Msa0109740:intron | 30.0% | |
| ! | GAAATGACATTTAGAATGTG+AGG | - | chr1_3:21814323-21814342 | Msa0109740:intron | 30.0% |
| TTTCTTAATCATTTGGGTCA+AGG | + | chr1_3:21814487-21814506 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr1_3:21814627-21814646 | Msa0109740:CDS | 30.0% |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr1_3:21814753-21814772 | Msa0109740:intron | 30.0% | |
| !!! | AAAAGAGGTTTTAGAAAAGG+AGG | + | chr1_3:21814868-21814887 | None:intergenic | 30.0% |
| AAAACGAGTTTGGCATTATT+GGG | - | chr1_3:21814936-21814955 | Msa0109740:CDS | 30.0% | |
| TAATTATGTCGTGTTATGCT+AGG | - | chr1_3:21815123-21815142 | Msa0109740:intron | 30.0% | |
| ! | TGCACAATTATTTTCAGAAG+AGG | - | chr1_3:21815198-21815217 | Msa0109740:intron | 30.0% |
| ! | GAATAATTTGAGCTTTGATC+GGG | + | chr1_3:21815436-21815455 | None:intergenic | 30.0% |
| GATCAAAGCTCAAATTATTC+AGG | - | chr1_3:21815436-21815455 | Msa0109740:intron | 30.0% | |
| ACGCAGTTAGACATTAAATA+TGG | + | chr1_3:21815724-21815743 | None:intergenic | 30.0% | |
| TCCTTTGTCCAAGTTTAAAT+CGG | - | chr1_3:21815790-21815809 | Msa0109740:intron | 30.0% | |
| ACACGCTATTTAGAAAAGTT+GGG | + | chr1_3:21816218-21816237 | None:intergenic | 30.0% | |
| ! | AGCTAGCAAATATTTTACGA+GGG | + | chr1_3:21816614-21816633 | None:intergenic | 30.0% |
| ! | AAGCTAGCAAATATTTTACG+AGG | + | chr1_3:21816615-21816634 | None:intergenic | 30.0% |
| TGTTAAATGAGTTTAAGCAG+CGG | + | chr1_3:21816640-21816659 | None:intergenic | 30.0% | |
| ATGTATGTATGTGTGTGTAA+AGG | - | chr1_3:21816819-21816838 | Msa0109740:CDS | 30.0% | |
| CATGCGCACAATAAATATTT+GGG | - | chr1_3:21816937-21816956 | Msa0109740:intron | 30.0% | |
| ATGCGCACAATAAATATTTG+GGG | - | chr1_3:21816938-21816957 | Msa0109740:intron | 30.0% | |
| CATGCAAAATAAAACCGTTA+TGG | - | chr1_3:21817168-21817187 | Msa0109740:intron | 30.0% | |
| ACAAGGGTAAAGACAAAAAA+AGG | - | chr1_3:21817308-21817327 | Msa0109740:intron | 30.0% | |
| !!! | TCAATTCTCATTGCCATTTT+AGG | + | chr1_3:21817338-21817357 | None:intergenic | 30.0% |
| GTGAATAGTCCTATAAAAGA+AGG | - | chr1_3:21817422-21817441 | Msa0109740:intron | 30.0% | |
| ! | GCTTTTGTTGAACTCTATAA+AGG | - | chr1_3:21817503-21817522 | Msa0109740:CDS | 30.0% |
| TTAATGAGGCTAATCATATG+TGG | - | chr1_3:21817813-21817832 | Msa0109740:intron | 30.0% | |
| CACGTAAAATGTTGGATAAT+TGG | - | chr1_3:21817849-21817868 | Msa0109740:intron | 30.0% | |
| ! | TTTTGTGACATACTCATGAT+TGG | + | chr1_3:21817967-21817986 | None:intergenic | 30.0% |
| AAATGAGAAATACCCTGATT+TGG | + | chr1_3:21818007-21818026 | None:intergenic | 30.0% | |
| ! | AAATCAGGGTATTTCTCATT+TGG | - | chr1_3:21818006-21818025 | Msa0109740:intron | 30.0% |
| CCATAATATTGAAGTGGTTT+CGG | + | chr1_3:21818242-21818261 | None:intergenic | 30.0% | |
| !! | AAAAATTGGTGTTAATCCTC+TGG | - | chr1_3:21818289-21818308 | Msa0109740:intron | 30.0% |
| CTTAACAATTTGTCAGTTGT+TGG | - | chr1_3:21818406-21818425 | Msa0109740:intron | 30.0% | |
| ACCATTTCAACACAATTGTT+TGG | - | chr1_3:21818438-21818457 | Msa0109740:intron | 30.0% | |
| ACCAAACAATTGTGTTGAAA+TGG | + | chr1_3:21818442-21818461 | None:intergenic | 30.0% | |
| AAGAGGAGAAAATAGTATTG+AGG | - | chr1_3:21818599-21818618 | Msa0109740:intron | 30.0% | |
| CATAATATATGTAGGAGTCA+TGG | - | chr1_3:21818683-21818702 | Msa0109740:intron | 30.0% | |
| ACTTATGGTAATTTGGGTAA+AGG | + | chr1_3:21819051-21819070 | None:intergenic | 30.0% | |
| ! | ATACCTTGTCAAACTTTTTG+AGG | + | chr1_3:21819156-21819175 | None:intergenic | 30.0% |
| TCAAAAAGTTTGACAAGGTA+TGG | - | chr1_3:21819155-21819174 | Msa0109740:CDS | 30.0% | |
| TCACTTTAACCCTATTAATC+AGG | - | chr1_3:21819566-21819585 | Msa0109740:intron | 30.0% | |
| ACATTTCATTAGTTCAGACA+AGG | - | chr1_3:21819638-21819657 | Msa0109740:intron | 30.0% | |
| ATGAAAGGTTGTTAGACTAA+TGG | - | chr1_3:21819781-21819800 | Msa0109740:intron | 30.0% | |
| TGCTAGCAATGATAGAAAAA+AGG | - | chr1_3:21819835-21819854 | Msa0109740:intron | 30.0% | |
| ACTATGTTTATCACACTTAG+TGG | + | chr1_3:21820191-21820210 | None:intergenic | 30.0% | |
| ! | GTTTTGTGTATATGCAATCT+TGG | - | chr1_3:21820294-21820313 | Msa0109740:intron | 30.0% |
| ! | TTTTGGTCATATGAAGAACT+AGG | + | chr1_3:21820407-21820426 | None:intergenic | 30.0% |
| CATAATAGTCCATGAAATGT+CGG | + | chr1_3:21821254-21821273 | None:intergenic | 30.0% | |
| GGCGATAGAATATATCTAAT+GGG | + | chr1_3:21821346-21821365 | None:intergenic | 30.0% | |
| AGACTATGTTACGAATAACA+CGG | + | chr1_3:21821388-21821407 | None:intergenic | 30.0% | |
| !!! | TCTTCTAGTGGACTTTTTTA+TGG | - | chr1_3:21821536-21821555 | Msa0109740:intron | 30.0% |
| ! | TCATTCTGGAAGATTATACA+TGG | - | chr1_3:21821760-21821779 | Msa0109740:intron | 30.0% |
| ! | TTCAACATTAAAAGCATACC+TGG | + | chr1_3:21821832-21821851 | None:intergenic | 30.0% |
| ATTACTAGTGTATAAGACGA+TGG | - | chr1_3:21821915-21821934 | Msa0109740:intron | 30.0% | |
| ! | ATTGTATTGGGATTTTGTCA+AGG | - | chr1_3:21822090-21822109 | Msa0109740:intron | 30.0% |
| !! | CGATTGAACGTATTTTAGAA+TGG | - | chr1_3:21822278-21822297 | Msa0109740:intron | 30.0% |
| !! | GTCAAAACATTTGATTTGTC+TGG | - | chr1_3:21822346-21822365 | Msa0109740:intron | 30.0% |
| !! | CTAAAACATTTGATTTTGCC+CGG | + | chr1_3:21822415-21822434 | None:intergenic | 30.0% |
| !!! | TGTTTTAGAAAATGTGCAGA+TGG | - | chr1_3:21822427-21822446 | Msa0109740:intron | 30.0% |
| !!! | GTTTTAGAAAATGTGCAGAT+GGG | - | chr1_3:21822428-21822447 | Msa0109740:intron | 30.0% |
| !!! | ATGTTGTTTTAAGAGTGACT+TGG | - | chr1_3:21822625-21822644 | Msa0109740:intron | 30.0% |
| ! | AGAATTTCTGTTAGCTTCAT+TGG | - | chr1_3:21822698-21822717 | Msa0109740:intron | 30.0% |
| ! | TTAGCTGTTCTAAGTTGTTT+AGG | + | chr1_3:21822765-21822784 | None:intergenic | 30.0% |
| !! | AACTTAACTTGTTTGTGAAC+AGG | - | chr1_3:21822857-21822876 | Msa0109740:intron | 30.0% |
| ! | TTGTATACAACTTTTGGTCT+TGG | - | chr1_3:21823129-21823148 | Msa0109740:CDS | 30.0% |
| CTCTATGTTTGAGAGAAAGT+AGG | + | chr1_3:21813426-21813445 | None:intergenic | 35.0% | |
| AAGCTCAACTAATACCAGAA+TGG | - | chr1_3:21813475-21813494 | Msa0109740:three_prime_UTR | 35.0% | |
| ACAAATGCATCTTTCCATTC+TGG | + | chr1_3:21813492-21813511 | None:intergenic | 35.0% | |
| !! | ACTCCATTTTCGATTCGATT+CGG | - | chr1_3:21813601-21813620 | Msa0109740:three_prime_UTR | 35.0% |
| AAACCGAATCGAATCGAAAA+TGG | + | chr1_3:21813607-21813626 | None:intergenic | 35.0% | |
| CTAATGAAGCCATGAATGAA+AGG | + | chr1_3:21814054-21814073 | None:intergenic | 35.0% | |
| ! | GTGAATTTTGTACCATCTGA+TGG | + | chr1_3:21814300-21814319 | None:intergenic | 35.0% |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr1_3:21814632-21814651 | None:intergenic | 35.0% | |
| AGAGAGAAAAAGAAAGAGAG+AGG | + | chr1_3:21814692-21814711 | None:intergenic | 35.0% | |
| GGCCACTAAACTAACTTTAA+TGG | + | chr1_3:21814847-21814866 | None:intergenic | 35.0% | |
| AAAGCTAGTGAAAACGAGTT+TGG | - | chr1_3:21814926-21814945 | Msa0109740:CDS | 35.0% | |
| GAAAACGAGTTTGGCATTAT+TGG | - | chr1_3:21814935-21814954 | Msa0109740:CDS | 35.0% | |
| TTTGGCATTATTGGGACTAA+GGG | - | chr1_3:21814944-21814963 | Msa0109740:CDS | 35.0% | |
| TAGTTTCGTGTGATGTTGTA+TGG | + | chr1_3:21814989-21815008 | None:intergenic | 35.0% | |
| !!! | AAGTGCATGTGTTTTTTGCA+AGG | - | chr1_3:21815224-21815243 | Msa0109740:intron | 35.0% |
| GCTAGATGAAGAGCTTAATA+AGG | - | chr1_3:21815246-21815265 | Msa0109740:CDS | 35.0% | |
| TTAAACAACTTCTCACTGAC+CGG | - | chr1_3:21815353-21815372 | Msa0109740:intron | 35.0% | |
| !!! | ATTTTGATTTGCTTCGTTGG+AGG | + | chr1_3:21815678-21815697 | None:intergenic | 35.0% |
| TCCGATTTAAACTTGGACAA+AGG | + | chr1_3:21815794-21815813 | None:intergenic | 35.0% | |
| TAAGGACTCCGATTTAAACT+TGG | + | chr1_3:21815801-21815820 | None:intergenic | 35.0% | |
| !!! | TAATTTTTTTGGGGTAGCCT+TGG | + | chr1_3:21815860-21815879 | None:intergenic | 35.0% |
| GACACGCTATTTAGAAAAGT+TGG | + | chr1_3:21816219-21816238 | None:intergenic | 35.0% | |
| ! | CTAGCAAATATTTTACGAGG+GGG | + | chr1_3:21816612-21816631 | None:intergenic | 35.0% |
| ! | GCTAGCAAATATTTTACGAG+GGG | + | chr1_3:21816613-21816632 | None:intergenic | 35.0% |
| GCATGCGCACAATAAATATT+TGG | - | chr1_3:21816936-21816955 | Msa0109740:intron | 35.0% | |
| ATACGTCGCACTAAATCAAA+AGG | + | chr1_3:21816993-21817012 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTAGTGCGACGTA+TGG | - | chr1_3:21816992-21817011 | Msa0109740:intron | 35.0% |
| AGTCCTATAAAAGAAGGGTA+TGG | - | chr1_3:21817428-21817447 | Msa0109740:intron | 35.0% | |
| ! | TCTCCATACCCTTCTTTTAT+AGG | + | chr1_3:21817434-21817453 | None:intergenic | 35.0% |
| !!! | ATGACCTGTAAGTTTTGAGA+AGG | + | chr1_3:21817535-21817554 | None:intergenic | 35.0% |
| ! | ATGTTGGATAATTGGTGACT+TGG | - | chr1_3:21817857-21817876 | Msa0109740:intron | 35.0% |
| GATATTAGCTGGGTATTAGT+GGG | - | chr1_3:21817883-21817902 | Msa0109740:intron | 35.0% | |
| AGTGTGAATGAATCCAAATC+AGG | - | chr1_3:21817991-21818010 | Msa0109740:intron | 35.0% | |
| GTGTGAATGAATCCAAATCA+GGG | - | chr1_3:21817992-21818011 | Msa0109740:intron | 35.0% | |
| CCGAAACCACTTCAATATTA+TGG | - | chr1_3:21818239-21818258 | Msa0109740:intron | 35.0% | |
| ! | TTTTACTCCTAACCGAACAT+CGG | + | chr1_3:21818342-21818361 | None:intergenic | 35.0% |
| ! | CTATAAAGTAGTTTGGTGGT+TGG | + | chr1_3:21818756-21818775 | None:intergenic | 35.0% |
| GAGTCTATAAAGTAGTTTGG+TGG | + | chr1_3:21818760-21818779 | None:intergenic | 35.0% | |
| GAGGAGTCTATAAAGTAGTT+TGG | + | chr1_3:21818763-21818782 | None:intergenic | 35.0% | |
| CACATTGCTAAAAAGCTCAT+CGG | + | chr1_3:21818873-21818892 | None:intergenic | 35.0% | |
| !! | TGAGCTTTTTAGCAATGTGA+TGG | - | chr1_3:21818874-21818893 | Msa0109740:intron | 35.0% |
| AGAATGCTGCATTATGGTAT+GGG | + | chr1_3:21818901-21818920 | None:intergenic | 35.0% | |
| TAGAATGCTGCATTATGGTA+TGG | + | chr1_3:21818902-21818921 | None:intergenic | 35.0% | |
| CTTGTTAGAATGCTGCATTA+TGG | + | chr1_3:21818907-21818926 | None:intergenic | 35.0% | |
| GATCCTCAAAAAGTTTGACA+AGG | - | chr1_3:21819150-21819169 | Msa0109740:CDS | 35.0% | |
| TGTATAGTGCACGTGTAATA+AGG | + | chr1_3:21819196-21819215 | None:intergenic | 35.0% | |
| ! | TCACGTTCTTTTGTGTTTCT+TGG | - | chr1_3:21819273-21819292 | Msa0109740:CDS | 35.0% |
| ! | TTTCTTGGTCAGTTGCATTT+TGG | - | chr1_3:21819288-21819307 | Msa0109740:CDS | 35.0% |
| ! | TTCTTGGTCAGTTGCATTTT+GGG | - | chr1_3:21819289-21819308 | Msa0109740:CDS | 35.0% |
| TATTGGGCAAAGTAAGATGT+AGG | + | chr1_3:21819323-21819342 | None:intergenic | 35.0% | |
| AATGAAACATCTTCACGTGA+GGG | + | chr1_3:21819451-21819470 | None:intergenic | 35.0% | |
| AAATGAAACATCTTCACGTG+AGG | + | chr1_3:21819452-21819471 | None:intergenic | 35.0% | |
| AGGGTTAAAGTGATCTCATT+AGG | + | chr1_3:21819559-21819578 | None:intergenic | 35.0% | |
| CTTTAACCCTATTAATCAGG+TGG | - | chr1_3:21819569-21819588 | Msa0109740:intron | 35.0% | |
| ! | AATAACTTGCAGAAGCTGTT+TGG | + | chr1_3:21819599-21819618 | None:intergenic | 35.0% |
| ! | TGTTAGACTAATGGATGAAG+TGG | - | chr1_3:21819790-21819809 | Msa0109740:intron | 35.0% |
| ! | AGCAAAGTGCTTTGTGAATA+TGG | + | chr1_3:21819819-21819838 | None:intergenic | 35.0% |
| TTAAAACCTCAAGTGCAGAA+AGG | - | chr1_3:21819869-21819888 | Msa0109740:intron | 35.0% | |
| GAAGTTATTACCGACAAAGA+AGG | + | chr1_3:21819909-21819928 | None:intergenic | 35.0% | |
| TTCTTTACAGGGTTATGTAC+AGG | - | chr1_3:21820256-21820275 | Msa0109740:intron | 35.0% | |
| AGAGAAAATACCACACAAGT+GGG | + | chr1_3:21820320-21820339 | None:intergenic | 35.0% | |
| TCTTCAGGTACAACATCTAA+TGG | - | chr1_3:21820380-21820399 | Msa0109740:intron | 35.0% | |
| TTAACACATCATGTGTCTGA+CGG | + | chr1_3:21820612-21820631 | None:intergenic | 35.0% | |
| AGTCTACACTTGTTCATGTA+TGG | - | chr1_3:21820879-21820898 | Msa0109740:intron | 35.0% | |
| TAACCAGAAGAAGAATTCCA+GGG | + | chr1_3:21821097-21821116 | None:intergenic | 35.0% | |
| ! | CGACATTTCATGGACTATTA+TGG | - | chr1_3:21821252-21821271 | Msa0109740:CDS | 35.0% |
| GGGCGATAGAATATATCTAA+TGG | + | chr1_3:21821347-21821366 | None:intergenic | 35.0% | |
| ! | AGTCTGCTCTCCATTTTATA+AGG | - | chr1_3:21821403-21821422 | Msa0109740:CDS | 35.0% |
| ATTACTACAGGTTCTTCTAG+TGG | - | chr1_3:21821524-21821543 | Msa0109740:intron | 35.0% | |
| GTATACAGATACCATTGCTA+AGG | - | chr1_3:21821672-21821691 | Msa0109740:intron | 35.0% | |
| ! | ACATTAAAAGCATACCTGGA+GGG | + | chr1_3:21821828-21821847 | None:intergenic | 35.0% |
| ! | AACATTAAAAGCATACCTGG+AGG | + | chr1_3:21821829-21821848 | None:intergenic | 35.0% |
| TGTGATAATCACTTCTGTGA+TGG | - | chr1_3:21822054-21822073 | Msa0109740:intron | 35.0% | |
| ! | ATTGGGATTTTGTCAAGGAT+TGG | - | chr1_3:21822095-21822114 | Msa0109740:intron | 35.0% |
| ! | TTGGGATTTTGTCAAGGATT+GGG | - | chr1_3:21822096-21822115 | Msa0109740:intron | 35.0% |
| GAGCATATACTACATGTCTA+TGG | - | chr1_3:21822180-21822199 | Msa0109740:intron | 35.0% | |
| ! | GAATTTGGCTTCGGTTAAAT+TGG | - | chr1_3:21822250-21822269 | Msa0109740:intron | 35.0% |
| !!! | AAGAAGTTACCGCTTTTTTG+TGG | + | chr1_3:21822310-21822329 | None:intergenic | 35.0% |
| !! | TTTTATTTAGGCTAATCGGG+CGG | + | chr1_3:21822504-21822523 | None:intergenic | 35.0% |
| !!! | GGTCAAGTGTCTCTTTTTTT+GGG | - | chr1_3:21822544-21822563 | Msa0109740:intron | 35.0% |
| AAAAATGGACATTGGATTGC+AGG | - | chr1_3:21822596-21822615 | Msa0109740:intron | 35.0% | |
| ! | TCTAACAACCTTGTTTGAAC+AGG | + | chr1_3:21822681-21822700 | None:intergenic | 35.0% |
| ! | ATTTCTGTTAGCTTCATTGG+AGG | - | chr1_3:21822701-21822720 | Msa0109740:intron | 35.0% |
| TCATTGGAGGTTATTAGAAG+AGG | - | chr1_3:21822714-21822733 | Msa0109740:intron | 35.0% | |
| CATTGGAGGTTATTAGAAGA+GGG | - | chr1_3:21822715-21822734 | Msa0109740:intron | 35.0% | |
| !! | TAACTTGTTTGTGAACAGGT+TGG | - | chr1_3:21822861-21822880 | Msa0109740:intron | 35.0% |
| AACGAGCATCTAAACAATGT+TGG | - | chr1_3:21822886-21822905 | Msa0109740:intron | 35.0% | |
| ! | CGCATCTTTTACATCACAAT+TGG | + | chr1_3:21823074-21823093 | None:intergenic | 35.0% |
| TAAAAGATGCGCATTGCAAA+TGG | - | chr1_3:21823083-21823102 | Msa0109740:CDS | 35.0% | |
| GCGGATAGAAGAATGTAAAG+AGG | + | chr1_3:21813388-21813407 | None:intergenic | 40.0% | |
| AGAGAAAGTAGGTGAAGTAG+GGG | + | chr1_3:21813415-21813434 | None:intergenic | 40.0% | |
| GAGAGAAAGTAGGTGAAGTA+GGG | + | chr1_3:21813416-21813435 | None:intergenic | 40.0% | |
| TGAGAGAAAGTAGGTGAAGT+AGG | + | chr1_3:21813417-21813436 | None:intergenic | 40.0% | |
| ! | TTGGGAGCTTGTTCTTCTTT+AGG | + | chr1_3:21813567-21813586 | None:intergenic | 40.0% |
| AAAGAAGAACAAGCTCCCAA+AGG | - | chr1_3:21813567-21813586 | Msa0109740:three_prime_UTR | 40.0% | |
| TCATTCATGGCTTCATTAGC+TGG | - | chr1_3:21814055-21814074 | Msa0109740:intron | 40.0% | |
| GAGAAAAAGAAAGAGAGAGG+AGG | + | chr1_3:21814689-21814708 | None:intergenic | 40.0% | |
| GTTTGGCATTATTGGGACTA+AGG | - | chr1_3:21814943-21814962 | Msa0109740:CDS | 40.0% | |
| TTGGCATTATTGGGACTAAG+GGG | - | chr1_3:21814945-21814964 | Msa0109740:CDS | 40.0% | |
| AAGAGAGTGAGTTTCTTGAG+AGG | - | chr1_3:21815290-21815309 | Msa0109740:CDS | 40.0% | |
| AGAGAGTGAGTTTCTTGAGA+GGG | - | chr1_3:21815291-21815310 | Msa0109740:CDS | 40.0% | |
| !!! | TCGGCGGCAGATTATTTTTT+CGG | + | chr1_3:21815381-21815400 | None:intergenic | 40.0% |
| GTCTAAACCTCTAGTAGAAG+AGG | - | chr1_3:21815645-21815664 | Msa0109740:CDS | 40.0% | |
| AAATCGGAGTCCTTAAACTC+AGG | - | chr1_3:21815806-21815825 | Msa0109740:intron | 40.0% | |
| AATCGGAGTCCTTAAACTCA+GGG | - | chr1_3:21815807-21815826 | Msa0109740:intron | 40.0% | |
| CATAGCCCTTCATTAGTATG+AGG | - | chr1_3:21815831-21815850 | Msa0109740:intron | 40.0% | |
| GGCTACCTCATACTAATGAA+GGG | + | chr1_3:21815839-21815858 | None:intergenic | 40.0% | |
| TGGCTACCTCATACTAATGA+AGG | + | chr1_3:21815840-21815859 | None:intergenic | 40.0% | |
| TCATTAGTATGAGGTAGCCA+AGG | - | chr1_3:21815840-21815859 | Msa0109740:intron | 40.0% | |
| !! | ATCAAAAGGCACTTGGAGAA+AGG | + | chr1_3:21816979-21816998 | None:intergenic | 40.0% |
| !! | GCACTAAATCAAAAGGCACT+TGG | + | chr1_3:21816986-21817005 | None:intergenic | 40.0% |
| CACACCAACAAAGGCTATAA+CGG | - | chr1_3:21817370-21817389 | Msa0109740:intron | 40.0% | |
| !! | GGCTGTTACTTCCATTTTGT+GGG | - | chr1_3:21817391-21817410 | Msa0109740:intron | 40.0% |
| !! | TGTTACTTCCATTTTGTGGG+AGG | - | chr1_3:21817394-21817413 | Msa0109740:intron | 40.0% |
| ! | TTCCATTTTGTGGGAGGATT+TGG | - | chr1_3:21817400-21817419 | Msa0109740:intron | 40.0% |
| GTTGAACTCTATAAAGGCCT+TGG | - | chr1_3:21817509-21817528 | Msa0109740:CDS | 40.0% | |
| !!! | TGTAAGTTTTGAGAAGGCCA+AGG | + | chr1_3:21817529-21817548 | None:intergenic | 40.0% |
| ! | TTGGCCTTCTCAAAACTTAC+AGG | - | chr1_3:21817528-21817547 | Msa0109740:intron | 40.0% |
| CAGTAGAGCACGTAAAATGT+TGG | - | chr1_3:21817841-21817860 | Msa0109740:intron | 40.0% | |
| ! | TTGGATAATTGGTGACTTGG+TGG | - | chr1_3:21817860-21817879 | Msa0109740:intron | 40.0% |
| !! | TGGATAATTGGTGACTTGGT+GGG | - | chr1_3:21817861-21817880 | Msa0109740:intron | 40.0% |
| GGATATTAGCTGGGTATTAG+TGG | - | chr1_3:21817882-21817901 | Msa0109740:intron | 40.0% | |
| GGTCTTGATTATCCGATGTT+CGG | - | chr1_3:21818327-21818346 | Msa0109740:intron | 40.0% | |
| TGATTATCCGATGTTCGGTT+AGG | - | chr1_3:21818332-21818351 | Msa0109740:intron | 40.0% | |
| TGGCAGCTCACTAAATATAG+TGG | - | chr1_3:21819117-21819136 | Msa0109740:CDS | 40.0% | |
| AGTGCAGAAAGGTTCTCATA+TGG | - | chr1_3:21819880-21819899 | Msa0109740:intron | 40.0% | |
| CATATGGTCACCTTCTTTGT+CGG | - | chr1_3:21819896-21819915 | Msa0109740:intron | 40.0% | |
| CTGATGTGATTGTCACATAG+TGG | - | chr1_3:21820165-21820184 | Msa0109740:intron | 40.0% | |
| GAGAGAAAATACCACACAAG+TGG | + | chr1_3:21820321-21820340 | None:intergenic | 40.0% | |
| ! | ATATAAGCTGGCTCAGTGTT+AGG | + | chr1_3:21820343-21820362 | None:intergenic | 40.0% |
| TAACACTGAGCCAGCTTATA+TGG | - | chr1_3:21820342-21820361 | Msa0109740:intron | 40.0% | |
| TAGACTGCTTCCATATAAGC+TGG | + | chr1_3:21820355-21820374 | None:intergenic | 40.0% | |
| AGATGTTGTACCTGAAGACA+GGG | + | chr1_3:21820378-21820397 | None:intergenic | 40.0% | |
| TAGATGTTGTACCTGAAGAC+AGG | + | chr1_3:21820379-21820398 | None:intergenic | 40.0% | |
| TCTTTATTCAGTCGCGAGTT+GGG | + | chr1_3:21820564-21820583 | None:intergenic | 40.0% | |
| TTCTTTATTCAGTCGCGAGT+TGG | + | chr1_3:21820565-21820584 | None:intergenic | 40.0% | |
| ATGGATGCAACCTATACATG+TGG | - | chr1_3:21820898-21820917 | Msa0109740:intron | 40.0% | |
| ATGCAACCTATACATGTGGA+AGG | - | chr1_3:21820902-21820921 | Msa0109740:intron | 40.0% | |
| TTGTAGCCTTCCACATGTAT+AGG | + | chr1_3:21820911-21820930 | None:intergenic | 40.0% | |
| TATTCATGACTGCTGTGGTT+GGG | - | chr1_3:21821009-21821028 | Msa0109740:intron | 40.0% | |
| TGGTTGTGCATCTTCTTCTT+AGG | - | chr1_3:21821036-21821055 | Msa0109740:intron | 40.0% | |
| GGTTGTGCATCTTCTTCTTA+GGG | - | chr1_3:21821037-21821056 | Msa0109740:intron | 40.0% | |
| CTAACCAGAAGAAGAATTCC+AGG | + | chr1_3:21821098-21821117 | None:intergenic | 40.0% | |
| GTTCAAAATCAGCAGCACAA+AGG | + | chr1_3:21821282-21821301 | None:intergenic | 40.0% | |
| ! | GATACCATTGCTAAGGCATT+TGG | - | chr1_3:21821679-21821698 | Msa0109740:intron | 40.0% |
| CAGAATGACAAGTTTCAGGA+TGG | + | chr1_3:21821748-21821767 | None:intergenic | 40.0% | |
| CATCCTGAAACTTGTCATTC+TGG | - | chr1_3:21821746-21821765 | Msa0109740:intron | 40.0% | |
| CTTCCAGAATGACAAGTTTC+AGG | + | chr1_3:21821752-21821771 | None:intergenic | 40.0% | |
| TGACTCTGATGTTGCACATT+TGG | - | chr1_3:21821943-21821962 | Msa0109740:intron | 40.0% | |
| TGTTGCACATTTGGCTAACA+TGG | - | chr1_3:21821952-21821971 | Msa0109740:intron | 40.0% | |
| GTTGCACATTTGGCTAACAT+GGG | - | chr1_3:21821953-21821972 | Msa0109740:intron | 40.0% | |
| TTGCACATTTGGCTAACATG+GGG | - | chr1_3:21821954-21821973 | Msa0109740:intron | 40.0% | |
| ! | TGGGATTTTGTCAAGGATTG+GGG | - | chr1_3:21822097-21822116 | Msa0109740:intron | 40.0% |
| ATCCTAACTCCAGAAATGCA+TGG | - | chr1_3:21822128-21822147 | Msa0109740:intron | 40.0% | |
| ATCTCTAAGCCATGCATTTC+TGG | + | chr1_3:21822140-21822159 | None:intergenic | 40.0% | |
| CTAAAATACGTTCAATCGGG+TGG | + | chr1_3:21822276-21822295 | None:intergenic | 40.0% | |
| TGGGTTTAGCCACAAAAAAG+CGG | - | chr1_3:21822298-21822317 | Msa0109740:intron | 40.0% | |
| TTTATTTAGGCTAATCGGGC+GGG | + | chr1_3:21822503-21822522 | None:intergenic | 40.0% | |
| AATATTAGGGTTGTGTCGGA+CGG | - | chr1_3:21822522-21822541 | Msa0109740:intron | 40.0% | |
| !!! | GGGTCAAGTGTCTCTTTTTT+TGG | - | chr1_3:21822543-21822562 | Msa0109740:intron | 40.0% |
| ACTGTCATGCACTTCAAAGT+GGG | - | chr1_3:21822654-21822673 | Msa0109740:intron | 40.0% | |
| ! | AGGTTATTAGAAGAGGGCAT+TGG | - | chr1_3:21822721-21822740 | Msa0109740:intron | 40.0% |
| GATGCAGATTCGGATAATTG+AGG | - | chr1_3:21822949-21822968 | Msa0109740:intron | 40.0% | |
| AGAAAGTAGGTGAAGTAGGG+GGG | + | chr1_3:21813413-21813432 | None:intergenic | 45.0% | |
| GAGAAAGTAGGTGAAGTAGG+GGG | + | chr1_3:21813414-21813433 | None:intergenic | 45.0% | |
| GAGTAGCCAAAGTCTCCTTT+GGG | + | chr1_3:21813585-21813604 | None:intergenic | 45.0% | |
| ACAACCCTCCCTTTCATTCA+TGG | - | chr1_3:21814042-21814061 | Msa0109740:intron | 45.0% | |
| GAAGCCATGAATGAAAGGGA+GGG | + | chr1_3:21814049-21814068 | None:intergenic | 45.0% | |
| TGAAGCCATGAATGAAAGGG+AGG | + | chr1_3:21814050-21814069 | None:intergenic | 45.0% | |
| ! | CACATTTTGCGCACAACTAC+CGG | + | chr1_3:21814210-21814229 | None:intergenic | 45.0% |
| ATGTCGTGTTATGCTAGGTG+AGG | - | chr1_3:21815128-21815147 | Msa0109740:intron | 45.0% | |
| CTAGGTGAGGAGGAAAATGA+TGG | - | chr1_3:21815141-21815160 | Msa0109740:intron | 45.0% | |
| GATGGAGGATAGTGAAGAAG+AGG | - | chr1_3:21815159-21815178 | Msa0109740:intron | 45.0% | |
| GAGAGTGAGTTTCTTGAGAG+GGG | - | chr1_3:21815292-21815311 | Msa0109740:CDS | 45.0% | |
| !!! | GCAGATTATTTTTTCGGCGC+CGG | + | chr1_3:21815375-21815394 | None:intergenic | 45.0% |
| ! | ATCTCGGCGTTGGAATTTCT+CGG | + | chr1_3:21815400-21815419 | None:intergenic | 45.0% |
| GGGAGAACGAGAGAAAATCT+CGG | + | chr1_3:21815416-21815435 | None:intergenic | 45.0% | |
| AGTCTAGCCTCTTCTACTAG+AGG | + | chr1_3:21815655-21815674 | None:intergenic | 45.0% | |
| ATCGGAGTCCTTAAACTCAG+GGG | - | chr1_3:21815808-21815827 | Msa0109740:intron | 45.0% | |
| TATAGCCTTTGTTGGTGTGG+TGG | + | chr1_3:21817369-21817388 | None:intergenic | 45.0% | |
| CGTTATAGCCTTTGTTGGTG+TGG | + | chr1_3:21817372-21817391 | None:intergenic | 45.0% | |
| ACAGCCGTTATAGCCTTTGT+TGG | + | chr1_3:21817377-21817396 | None:intergenic | 45.0% | |
| !! | CGGCTGTTACTTCCATTTTG+TGG | - | chr1_3:21817390-21817409 | Msa0109740:intron | 45.0% |
| CACCAAATCCTCCCACAAAA+TGG | + | chr1_3:21817405-21817424 | None:intergenic | 45.0% | |
| !! | TGACTTGGTGGGATATTAGC+TGG | - | chr1_3:21817872-21817891 | Msa0109740:intron | 45.0% |
| !! | GACTTGGTGGGATATTAGCT+GGG | - | chr1_3:21817873-21817892 | Msa0109740:intron | 45.0% |
| GAAGTGGTTTCGGTTAGAAC+AGG | + | chr1_3:21818232-21818251 | None:intergenic | 45.0% | |
| ! | TGTTAATCCTCTGGTTCCCA+GGG | - | chr1_3:21818298-21818317 | Msa0109740:intron | 45.0% |
| ! | AATCAAGACCCCTTTTCCCT+GGG | + | chr1_3:21818317-21818336 | None:intergenic | 45.0% |
| ! | TAATCAAGACCCCTTTTCCC+TGG | + | chr1_3:21818318-21818337 | None:intergenic | 45.0% |
| TTGTCCCTGTGAGCTTAACT+CGG | - | chr1_3:21818641-21818660 | Msa0109740:intron | 45.0% | |
| !! | AACAGTGTCGATGCCTGAAA+AGG | - | chr1_3:21818930-21818949 | Msa0109740:intron | 45.0% |
| GGCATGCCACCTGATTAATA+GGG | + | chr1_3:21819578-21819597 | None:intergenic | 45.0% | |
| TGGCATGCCACCTGATTAAT+AGG | + | chr1_3:21819579-21819598 | None:intergenic | 45.0% | |
| TGAGAACCTTTCTGCACTTG+AGG | + | chr1_3:21819878-21819897 | None:intergenic | 45.0% | |
| TTCAGTTCGTGAGCTGTGAT+CGG | + | chr1_3:21820507-21820526 | None:intergenic | 45.0% | |
| CTATGCTTTAGTGCTGTGCT+TGG | + | chr1_3:21820966-21820985 | None:intergenic | 45.0% | |
| CACTGTATTCATGACTGCTG+TGG | - | chr1_3:21821004-21821023 | Msa0109740:intron | 45.0% | |
| GTATTCATGACTGCTGTGGT+TGG | - | chr1_3:21821008-21821027 | Msa0109740:intron | 45.0% | |
| !!! | TAGGGCTGCAGGATTTTTTC+CGG | - | chr1_3:21821055-21821074 | Msa0109740:intron | 45.0% |
| CAGAAGAAGAATTCCAGGGA+TGG | + | chr1_3:21821093-21821112 | None:intergenic | 45.0% | |
| CATCCCTGGAATTCTTCTTC+TGG | - | chr1_3:21821091-21821110 | Msa0109740:intron | 45.0% | |
| ATCACTGGACCGACATTTCA+TGG | - | chr1_3:21821242-21821261 | Msa0109740:CDS | 45.0% | |
| GGATGAAGCAGAAACGAGTT+GGG | + | chr1_3:21821367-21821386 | None:intergenic | 45.0% | |
| GTCTCCAAATGCCTTAGCAA+TGG | + | chr1_3:21821686-21821705 | None:intergenic | 45.0% | |
| ! | CTAAGGCATTTGGAGACAAC+TGG | - | chr1_3:21821689-21821708 | Msa0109740:intron | 45.0% |
| ! | GGGATTTTGTCAAGGATTGG+GGG | - | chr1_3:21822098-21822117 | Msa0109740:intron | 45.0% |
| !! | AGCCATGCATTTCTGGAGTT+AGG | + | chr1_3:21822133-21822152 | None:intergenic | 45.0% |
| GCATTGCCTGATTGTGTAAC+CGG | - | chr1_3:21822393-21822412 | Msa0109740:intron | 45.0% | |
| CATTGCCTGATTGTGTAACC+GGG | - | chr1_3:21822394-21822413 | Msa0109740:intron | 45.0% | |
| ! | TTTTGCCCGGTTACACAATC+AGG | + | chr1_3:21822402-21822421 | None:intergenic | 45.0% |
| TTATTTAGGCTAATCGGGCG+GGG | + | chr1_3:21822502-21822521 | None:intergenic | 45.0% | |
| ATATTAGGGTTGTGTCGGAC+GGG | - | chr1_3:21822523-21822542 | Msa0109740:intron | 45.0% | |
| GACTGTCATGCACTTCAAAG+TGG | - | chr1_3:21822653-21822672 | Msa0109740:intron | 45.0% | |
| CTGTCATGCACTTCAAAGTG+GGG | - | chr1_3:21822655-21822674 | Msa0109740:intron | 45.0% | |
| !! | GAGGGCATTGGAATTTCTAC+AGG | - | chr1_3:21822733-21822752 | Msa0109740:intron | 45.0% |
| TCTGCATCACGAAAGGGTAA+TGG | + | chr1_3:21822937-21822956 | None:intergenic | 45.0% | |
| ACCCTTTCGTGATGCAGATT+CGG | - | chr1_3:21822939-21822958 | Msa0109740:intron | 45.0% | |
| TCCGAATCTGCATCACGAAA+GGG | + | chr1_3:21822943-21822962 | None:intergenic | 45.0% | |
| ATCCGAATCTGCATCACGAA+AGG | + | chr1_3:21822944-21822963 | None:intergenic | 45.0% | |
| !! | TAAATAAATAAATAAGTATA+TGG | - | chr1_3:21813983-21814002 | Msa0109740:CDS | 5.0% |
| !!! | TTTATTTTTTTCTTTAAATT+TGG | - | chr1_3:21816586-21816605 | Msa0109740:intron | 5.0% |
| !! | AAAAAAATACATAAAATTAA+AGG | - | chr1_3:21817706-21817725 | Msa0109740:intron | 5.0% |
| !!! | AATTTTTTTAATCAATTTAA+TGG | + | chr1_3:21818276-21818295 | None:intergenic | 5.0% |
| !! | ATTAAATTGATTAAAAAAAT+TGG | - | chr1_3:21818275-21818294 | Msa0109740:intron | 5.0% |
| !! | TAAAATTATAAAATCAATTA+AGG | + | chr1_3:21820234-21820253 | None:intergenic | 5.0% |
| GAAAGTAGGTGAAGTAGGGG+GGG | + | chr1_3:21813412-21813431 | None:intergenic | 50.0% | |
| CAAGCTCCCAAAGGAGACTT+TGG | - | chr1_3:21813576-21813595 | Msa0109740:three_prime_UTR | 50.0% | |
| GGAGTAGCCAAAGTCTCCTT+TGG | + | chr1_3:21813586-21813605 | None:intergenic | 50.0% | |
| TCGTGTTATGCTAGGTGAGG+AGG | - | chr1_3:21815131-21815150 | Msa0109740:intron | 50.0% | |
| GGTGAGGAGGAAAATGATGG+AGG | - | chr1_3:21815144-21815163 | Msa0109740:intron | 50.0% | |
| ACGAGAGAAAATCTCGGCGT+TGG | + | chr1_3:21815410-21815429 | None:intergenic | 50.0% | |
| TTCGGTTAGAACAGGTGTGC+TGG | + | chr1_3:21818224-21818243 | None:intergenic | 50.0% | |
| ! | GTGTTAATCCTCTGGTTCCC+AGG | - | chr1_3:21818297-21818316 | Msa0109740:intron | 50.0% |
| CCAACCGAGTTAAGCTCACA+GGG | + | chr1_3:21818648-21818667 | None:intergenic | 50.0% | |
| ACCAACCGAGTTAAGCTCAC+AGG | + | chr1_3:21818649-21818668 | None:intergenic | 50.0% | |
| GTGAGCTTAACTCGGTTGGT+AGG | - | chr1_3:21818649-21818668 | Msa0109740:intron | 50.0% | |
| AGGAGTCATGGTTCGAACTC+TGG | - | chr1_3:21818695-21818714 | Msa0109740:intron | 50.0% | |
| GATGCCTGAAAAGGACCAGT+GGG | - | chr1_3:21818939-21818958 | Msa0109740:intron | 50.0% | |
| AAAAGGACCAGTGGGACTGT+GGG | - | chr1_3:21818947-21818966 | Msa0109740:intron | 50.0% | |
| AAGCAGTCTACCCTGTCTTC+AGG | - | chr1_3:21820365-21820384 | Msa0109740:intron | 50.0% | |
| ! | ATTCAGTCGCGAGTTGGGAT+CGG | + | chr1_3:21820559-21820578 | None:intergenic | 50.0% |
| CATCTTCTTCTTAGGGCTGC+AGG | - | chr1_3:21821044-21821063 | Msa0109740:intron | 50.0% | |
| !!! | AGGGCTGCAGGATTTTTTCC+GGG | - | chr1_3:21821056-21821075 | Msa0109740:intron | 50.0% |
| CGGATGAAGCAGAAACGAGT+TGG | + | chr1_3:21821368-21821387 | None:intergenic | 50.0% | |
| GGCTGATCAACTTACTAGCC+AGG | - | chr1_3:21821557-21821576 | Msa0109740:intron | 50.0% | |
| ! | TGGAGGGCACGCCAAAAATA+TGG | + | chr1_3:21821812-21821831 | None:intergenic | 50.0% |
| !!! | ATATTTTTGGCGTGCCCTCC+AGG | - | chr1_3:21821811-21821830 | Msa0109740:intron | 50.0% |
| ! | GGGGAAGTATGTGTCTGCAA+TGG | - | chr1_3:21821973-21821992 | Msa0109740:intron | 50.0% |
| GCCATATGTTACTCTAGCCC+CGG | + | chr1_3:21822005-21822024 | None:intergenic | 50.0% | |
| GGGCTAGAGTAACATATGGC+AGG | - | chr1_3:21822005-21822024 | Msa0109740:intron | 50.0% | |
| TATTTAGGCTAATCGGGCGG+GGG | + | chr1_3:21822501-21822520 | None:intergenic | 50.0% | |
| AAGTGGGGCCTGTTCAAACA+AGG | - | chr1_3:21822670-21822689 | Msa0109740:intron | 50.0% | |
| ! | TCGGCGTTGGAATTTCTCGG+CGG | + | chr1_3:21815397-21815416 | None:intergenic | 55.0% |
| GGGCTATGCCCCTGAGTTTA+AGG | + | chr1_3:21815819-21815838 | None:intergenic | 55.0% | |
| TCCAGCCACCACACCAACAA+AGG | - | chr1_3:21817361-21817380 | Msa0109740:intron | 55.0% | |
| ! | TCCTCTGGTTCCCAGGGAAA+AGG | - | chr1_3:21818304-21818323 | Msa0109740:intron | 55.0% |
| ! | CCTCTGGTTCCCAGGGAAAA+GGG | - | chr1_3:21818305-21818324 | Msa0109740:intron | 55.0% |
| ! | CTCTGGTTCCCAGGGAAAAG+GGG | - | chr1_3:21818306-21818325 | Msa0109740:intron | 55.0% |
| CCCTGTGAGCTTAACTCGGT+TGG | - | chr1_3:21818645-21818664 | Msa0109740:intron | 55.0% | |
| CGATGCCTGAAAAGGACCAG+TGG | - | chr1_3:21818938-21818957 | Msa0109740:intron | 55.0% | |
| ! | CAGTCCCACTGGTCCTTTTC+AGG | + | chr1_3:21818946-21818965 | None:intergenic | 55.0% |
| GAAAAGGACCAGTGGGACTG+TGG | - | chr1_3:21818946-21818965 | Msa0109740:intron | 55.0% | |
| GCAATCTTGGCCCACTTGTG+TGG | - | chr1_3:21820307-21820326 | Msa0109740:intron | 55.0% | |
| GACTGCTGTGGTTGGGTCAA+TGG | - | chr1_3:21821016-21821035 | Msa0109740:intron | 55.0% | |
| GGGATGGCATCAACATTGCC+CGG | + | chr1_3:21821077-21821096 | None:intergenic | 55.0% | |
| GGCAATGTTGATGCCATCCC+TGG | - | chr1_3:21821077-21821096 | Msa0109740:intron | 55.0% | |
| GTGTCTGCAATGGTTGCAGC+CGG | - | chr1_3:21821983-21822002 | Msa0109740:intron | 55.0% | |
| TGTCTGCAATGGTTGCAGCC+GGG | - | chr1_3:21821984-21822003 | Msa0109740:intron | 55.0% | |
| GCCGGGGCTAGAGTAACATA+TGG | - | chr1_3:21822001-21822020 | Msa0109740:intron | 55.0% | |
| TAGGTGAAGTAGGGGGGGTG+CGG | + | chr1_3:21813407-21813426 | None:intergenic | 60.0% | |
| GCCTTTGTTGGTGTGGTGGC+TGG | + | chr1_3:21817365-21817384 | None:intergenic | 60.0% | |
| ! | CCCTTTTCCCTGGGAACCAG+AGG | + | chr1_3:21818308-21818327 | None:intergenic | 60.0% |
| GTCTGCAATGGTTGCAGCCG+GGG | - | chr1_3:21821985-21822004 | Msa0109740:intron | 60.0% | |
| TGCTGCTCCCACAGTCCCAC+TGG | + | chr1_3:21818957-21818976 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 21813368 | 21823284 | 21813368 | ID=Msa0109740;Name=Msa0109740 |
| chr1_3 | mRNA | 21813368 | 21823284 | 21813368 | ID=Msa0109740-mRNA-1;Parent=Msa0109740;Name=Msa0109740-mRNA-1;_AED=0.11;_eAED=0.11;_QI=82|1|1|1|1|1|14|315|772 |
| chr1_3 | exon | 21813368 | 21813773 | 21813368 | ID=Msa0109740-mRNA-1:exon:7863;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21813898 | 21814034 | 21813898 | ID=Msa0109740-mRNA-1:exon:7862;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21814451 | 21814729 | 21814451 | ID=Msa0109740-mRNA-1:exon:7861;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21814820 | 21814972 | 21814820 | ID=Msa0109740-mRNA-1:exon:7860;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21815074 | 21815118 | 21815074 | ID=Msa0109740-mRNA-1:exon:7859;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21815228 | 21815332 | 21815228 | ID=Msa0109740-mRNA-1:exon:7858;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21815540 | 21815789 | 21815540 | ID=Msa0109740-mRNA-1:exon:7857;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21816266 | 21816386 | 21816266 | ID=Msa0109740-mRNA-1:exon:7856;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21816735 | 21816864 | 21816735 | ID=Msa0109740-mRNA-1:exon:7855;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21816993 | 21817064 | 21816993 | ID=Msa0109740-mRNA-1:exon:7854;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21817481 | 21817529 | 21817481 | ID=Msa0109740-mRNA-1:exon:7853;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21819103 | 21819445 | 21819103 | ID=Msa0109740-mRNA-1:exon:7852;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21821195 | 21821507 | 21821195 | ID=Msa0109740-mRNA-1:exon:7851;Parent=Msa0109740-mRNA-1 |
| chr1_3 | exon | 21822972 | 21823284 | 21822972 | ID=Msa0109740-mRNA-1:exon:7850;Parent=Msa0109740-mRNA-1 |
| chr1_3 | five_prime_UTR | 21823203 | 21823284 | 21823203 | ID=Msa0109740-mRNA-1:five_prime_utr;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21822972 | 21823202 | 21822972 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21821195 | 21821507 | 21821195 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21819103 | 21819445 | 21819103 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21817481 | 21817529 | 21817481 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21816993 | 21817064 | 21816993 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21816735 | 21816864 | 21816735 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21816266 | 21816386 | 21816266 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21815540 | 21815789 | 21815540 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21815228 | 21815332 | 21815228 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21815074 | 21815118 | 21815074 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21814820 | 21814972 | 21814820 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21814451 | 21814729 | 21814451 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21813898 | 21814034 | 21813898 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | CDS | 21813683 | 21813773 | 21813683 | ID=Msa0109740-mRNA-1:cds;Parent=Msa0109740-mRNA-1 |
| chr1_3 | three_prime_UTR | 21813368 | 21813682 | 21813368 | ID=Msa0109740-mRNA-1:three_prime_utr;Parent=Msa0109740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
