Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156060 | sp|Q8S403|PHO1_ARATH | 65.866 | 791 | 242 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1056 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156060 | A0A072VHJ2 | 99.094 | 773 | 6 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1596 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015580 | Msa0156060 | 0.951799 | 9.502262e-110 | -8.615850e-47 |
| Msa0109740 | Msa0156060 | 0.945381 | 3.395790e-104 | -8.615850e-47 |
| Msa0156060 | Msa0156100 | 0.992414 | 3.784878e-193 | -8.615850e-47 |
| Msa0156060 | Msa0170830 | 0.803059 | 4.176356e-49 | -8.615850e-47 |
| Msa0156060 | Msa0191990 | 0.844205 | 8.731340e-59 | -8.615850e-47 |
| Msa0156060 | Msa0192680 | 0.838645 | 2.543271e-57 | -8.615850e-47 |
| Msa0156060 | Msa0272600 | 0.850875 | 1.279350e-60 | -8.615850e-47 |
| Msa0156060 | Msa0312810 | 0.846805 | 1.724647e-59 | -8.615850e-47 |
| Msa0156060 | Msa0434130 | 0.820225 | 7.674892e-53 | -8.615850e-47 |
| Msa0156060 | Msa0477910 | 0.814720 | 1.334365e-51 | -8.615850e-47 |
| Msa0156060 | Msa0521950 | 0.806439 | 8.221440e-50 | -8.615850e-47 |
| Msa0156060 | Msa0581570 | 0.853034 | 3.119752e-61 | -8.615850e-47 |
| Msa0156060 | Msa0931750 | 0.863723 | 2.030781e-64 | -8.615850e-47 |
| Msa0156060 | Msa1451520 | 0.840899 | 6.584155e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156060 | MtrunA17_Chr1g0166651 | 99.094 | 773 | 6 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1596 |
| Msa0156060 | MtrunA17_Chr1g0187381 | 77.191 | 776 | 167 | 4 | 1 | 771 | 54 | 824 | 0.0 | 1239 |
| Msa0156060 | MtrunA17_Chr8g0368741 | 46.320 | 788 | 397 | 7 | 1 | 771 | 1 | 779 | 0.0 | 709 |
| Msa0156060 | MtrunA17_Chr5g0417841 | 32.650 | 781 | 482 | 11 | 4 | 771 | 3 | 752 | 3.85e-145 | 444 |
| Msa0156060 | MtrunA17_Chr2g0302531 | 34.601 | 815 | 470 | 21 | 2 | 772 | 1 | 796 | 5.89e-144 | 442 |
| Msa0156060 | MtrunA17_Chr7g0217801 | 33.755 | 791 | 493 | 14 | 2 | 772 | 1 | 780 | 3.11e-139 | 429 |
| Msa0156060 | MtrunA17_Chr7g0217771 | 38.920 | 352 | 205 | 5 | 429 | 772 | 1 | 350 | 7.10e-80 | 260 |
| Msa0156060 | MtrunA17_Chr7g0217821 | 35.694 | 353 | 217 | 5 | 429 | 772 | 1 | 352 | 1.26e-70 | 235 |
| Msa0156060 | MtrunA17_Chr7g0217831 | 32.487 | 394 | 234 | 11 | 2 | 380 | 1 | 377 | 1.62e-46 | 170 |
| Msa0156060 | MtrunA17_Chr7g0246941 | 29.446 | 343 | 207 | 14 | 424 | 747 | 76 | 402 | 7.71e-31 | 126 |
| Msa0156060 | MtrunA17_Chr2g0322931 | 27.419 | 372 | 233 | 13 | 404 | 754 | 91 | 446 | 2.62e-29 | 122 |
| Msa0156060 | MtrunA17_Chr7g0217781 | 32.143 | 196 | 115 | 3 | 188 | 380 | 7 | 187 | 2.95e-24 | 101 |
| Msa0156060 | MtrunA17_Chr7g0217791 | 32.895 | 152 | 93 | 5 | 2 | 145 | 1 | 151 | 2.29e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156060 | AT3G23430.1 | 65.866 | 791 | 242 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1056 |
| Msa0156060 | AT1G68740.1 | 46.683 | 799 | 384 | 11 | 1 | 772 | 1 | 784 | 0.0 | 683 |
| Msa0156060 | AT1G68740.2 | 44.932 | 730 | 360 | 11 | 1 | 703 | 1 | 715 | 0.0 | 584 |
| Msa0156060 | AT3G29060.1 | 32.406 | 827 | 464 | 13 | 2 | 767 | 1 | 793 | 2.30e-146 | 449 |
| Msa0156060 | AT1G35350.1 | 34.483 | 783 | 465 | 15 | 2 | 771 | 1 | 748 | 3.65e-144 | 441 |
| Msa0156060 | AT1G26730.1 | 34.234 | 777 | 461 | 14 | 2 | 765 | 1 | 740 | 5.87e-144 | 441 |
| Msa0156060 | AT1G14040.1 | 31.758 | 825 | 497 | 15 | 2 | 772 | 1 | 813 | 1.07e-142 | 439 |
| Msa0156060 | AT4G25350.1 | 32.991 | 779 | 479 | 10 | 2 | 772 | 1 | 744 | 4.54e-139 | 428 |
| Msa0156060 | AT1G69480.2 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.70e-138 | 426 |
| Msa0156060 | AT1G69480.1 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.70e-138 | 426 |
| Msa0156060 | AT2G03260.1 | 31.656 | 815 | 500 | 10 | 2 | 771 | 1 | 803 | 6.38e-136 | 422 |
| Msa0156060 | AT2G03240.1 | 32.975 | 837 | 477 | 18 | 2 | 771 | 1 | 820 | 5.22e-135 | 420 |
| Msa0156060 | AT1G35350.2 | 39.567 | 508 | 301 | 4 | 268 | 771 | 59 | 564 | 4.20e-127 | 391 |
| Msa0156060 | AT2G03260.2 | 38.846 | 520 | 296 | 6 | 267 | 771 | 78 | 590 | 1.77e-123 | 383 |
| Msa0156060 | AT1G26730.2 | 31.616 | 718 | 441 | 14 | 2 | 706 | 1 | 681 | 1.14e-111 | 355 |
| Msa0156060 | AT2G03250.1 | 30.464 | 732 | 447 | 20 | 2 | 707 | 1 | 696 | 1.66e-97 | 318 |
| Msa0156060 | AT2G03250.2 | 29.630 | 621 | 383 | 16 | 2 | 604 | 1 | 585 | 6.43e-73 | 249 |
| Msa0156060 | AT2G32295.1 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.78e-29 | 123 |
| Msa0156060 | AT2G32295.2 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.78e-29 | 123 |
| Msa0156060 | AT5G35730.1 | 26.822 | 343 | 216 | 13 | 424 | 747 | 102 | 428 | 1.90e-27 | 117 |
Find 147 sgRNAs with CRISPR-Local
Find 591 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTGTGCATCTTCTTCTT+AGG | 0.158333 | 1_4:-21674204 | Msa0156060:CDS |
| CTTCATACCTGAATGATATT+TGG | 0.178770 | 1_4:+21682678 | None:intergenic |
| TCTCTTGTTTCCTATAAAAT+TGG | 0.193619 | 1_4:+21680757 | None:intergenic |
| ATCTCTAAGCCATGCATTTC+TGG | 0.202156 | 1_4:+21673136 | None:intergenic |
| TTGGGAGCTTGTTCTTCTTT+AGG | 0.202238 | 1_4:+21682780 | None:intergenic |
| AGCAAAGTGCTTTGTGAATA+TGG | 0.240631 | 1_4:+21675770 | None:intergenic |
| CTTCCAGAATGACAAGTTTC+AGG | 0.243384 | 1_4:+21673524 | None:intergenic |
| ATGACTTTGTATACAACTTT+TGG | 0.258446 | 1_4:-21672150 | Msa0156060:three_prime_UTR |
| AAACCGAATCGAATCGAAAA+TGG | 0.266596 | 1_4:+21682740 | None:intergenic |
| ACAAATGCATCTTTCCATTC+TGG | 0.268062 | 1_4:+21682855 | None:intergenic |
| TAACACTGAGCCAGCTTATA+TGG | 0.270583 | 1_4:-21675017 | Msa0156060:CDS |
| GAAGATTGTAAATGTCAATT+TGG | 0.284176 | 1_4:-21672054 | Msa0156060:three_prime_UTR |
| ATGAAACTTACCCTATAAAA+TGG | 0.285149 | 1_4:+21673858 | None:intergenic |
| AGAATTTCTGTTAGCTTCAT+TGG | 0.286639 | 1_4:-21672575 | Msa0156060:CDS |
| GATCAAAGCTCAAATTATTC+AGG | 0.296286 | 1_4:-21680594 | Msa0156060:intron |
| TTGGCCTTCTCAAAACTTAC+AGG | 0.301447 | 1_4:-21678498 | Msa0156060:intron |
| CATCCCTGGAATTCTTCTTC+TGG | 0.305890 | 1_4:-21674149 | Msa0156060:intron |
| TACATTGTATCAATTGTATT+GGG | 0.320853 | 1_4:-21673195 | Msa0156060:CDS |
| CACCAAATCCTCCCACAAAA+TGG | 0.322606 | 1_4:+21678624 | None:intergenic |
| TATACAAAGTCATAATTTCT+AGG | 0.335003 | 1_4:+21672160 | None:intergenic |
| TTGTAGCCTTCCACATGTAT+AGG | 0.342705 | 1_4:+21674332 | None:intergenic |
| CTCTCAAACATAGAGAAATA+TGG | 0.343344 | 1_4:-21682913 | Msa0156060:exon |
| GATACCATTGCTAAGGCATT+TGG | 0.344575 | 1_4:-21673594 | Msa0156060:CDS |
| TGACTCTGATGTTGCACATT+TGG | 0.345973 | 1_4:-21673330 | Msa0156060:CDS |
| CATCCTGAAACTTGTCATTC+TGG | 0.357319 | 1_4:-21673527 | Msa0156060:CDS |
| TGTAAAGAGGAATATGTTAT+AGG | 0.363657 | 1_4:+21682972 | None:intergenic |
| CATCTTCTTCTTAGGGCTGC+AGG | 0.364468 | 1_4:-21674196 | Msa0156060:CDS |
| GCTAGATGAAGAGCTTAATA+AGG | 0.366604 | 1_4:-21680784 | Msa0156060:CDS |
| CTACATTGTATCAATTGTAT+TGG | 0.370636 | 1_4:-21673196 | Msa0156060:CDS |
| GCCTTTGTTGGTGTGGTGGC+TGG | 0.373706 | 1_4:+21678664 | None:intergenic |
| GGTTGTGCATCTTCTTCTTA+GGG | 0.381083 | 1_4:-21674203 | Msa0156060:CDS |
| AGTCTACACTTGTTCATGTA+TGG | 0.384683 | 1_4:-21674361 | Msa0156060:CDS |
| CTAACCAGAAGAAGAATTCC+AGG | 0.386872 | 1_4:+21674145 | None:intergenic |
| ATATAAGCTGGCTCAGTGTT+AGG | 0.387839 | 1_4:+21675019 | None:intergenic |
| GACTGCTGTGGTTGGGTCAA+TGG | 0.390307 | 1_4:-21674224 | Msa0156060:CDS |
| CATATGGTCACCTTCTTTGT+CGG | 0.390777 | 1_4:-21675690 | Msa0156060:intron |
| TGAGAGAAAGTAGGTGAAGT+AGG | 0.393294 | 1_4:+21682930 | None:intergenic |
| TAACAAACCAAATATCATTC+AGG | 0.396672 | 1_4:-21682685 | Msa0156060:intron |
| ACCCTTTCGTGATGCAGATT+CGG | 0.399651 | 1_4:-21672334 | Msa0156060:CDS |
| GGAGTAGCCAAAGTCTCCTT+TGG | 0.403059 | 1_4:+21682761 | None:intergenic |
| AGCCATGCATTTCTGGAGTT+AGG | 0.404681 | 1_4:+21673143 | None:intergenic |
| TCTAACAACCTTGTTTGAAC+AGG | 0.405992 | 1_4:+21672595 | None:intergenic |
| ATGAAAGGTTGTTAGACTAA+TGG | 0.409132 | 1_4:-21675805 | Msa0156060:intron |
| GTTGAACTCTATAAAGGCCT+TGG | 0.409693 | 1_4:-21678517 | Msa0156060:CDS |
| CTAAGGCATTTGGAGACAAC+TGG | 0.410888 | 1_4:-21673584 | Msa0156060:CDS |
| AATAACTTGCAGAAGCTGTT+TGG | 0.412963 | 1_4:+21676042 | None:intergenic |
| GGCAATGTTGATGCCATCCC+TGG | 0.418502 | 1_4:-21674163 | Msa0156060:CDS |
| GAGCATATACTACATGTCTA+TGG | 0.419044 | 1_4:-21673093 | Msa0156060:intron |
| TGGCAGCTCACTAAATATAG+TGG | 0.425101 | 1_4:-21676898 | Msa0156060:intron |
| GAGAGAAAGTAGGTGAAGTA+GGG | 0.425778 | 1_4:+21682931 | None:intergenic |
| CAAGCTCCCAAAGGAGACTT+TGG | 0.433450 | 1_4:-21682768 | Msa0156060:CDS |
| AGAAAGTAGGTGAAGTAGGG+GGG | 0.438666 | 1_4:+21682934 | None:intergenic |
| TTCTCTACAGGGTTATGTAC+AGG | 0.442470 | 1_4:-21675103 | Msa0156060:intron |
| GAATAATTTGAGCTTTGATC+GGG | 0.445025 | 1_4:+21680597 | None:intergenic |
| ATCTCGGCGTTGGAATTTCT+CGG | 0.447193 | 1_4:+21680633 | None:intergenic |
| AAGCAGTCTACCCTGTCTTC+AGG | 0.450330 | 1_4:-21674994 | Msa0156060:intron |
| TAAAAGATGCGCATTGCAAA+TGG | 0.466249 | 1_4:-21672190 | Msa0156060:three_prime_UTR |
| ACAGCCGTTATAGCCTTTGT+TGG | 0.466698 | 1_4:+21678652 | None:intergenic |
| AAATTCAGAAACATCACAAA+TGG | 0.467434 | 1_4:-21678794 | Msa0156060:CDS |
| CACACCAACAAAGGCTATAA+CGG | 0.472144 | 1_4:-21678656 | Msa0156060:CDS |
| GTGTCTGCAATGGTTGCAGC+CGG | 0.472477 | 1_4:-21673290 | Msa0156060:CDS |
| GTGAATAGTCCTATAAAAGA+AGG | 0.475341 | 1_4:-21678604 | Msa0156060:CDS |
| GAGGGCATTGGAATTTCTAC+AGG | 0.486316 | 1_4:-21672540 | Msa0156060:intron |
| GGCGATAGAATATATCTAAC+GGG | 0.488082 | 1_4:+21673928 | None:intergenic |
| TGAATAATTTGAGCTTTGAT+CGG | 0.488297 | 1_4:+21680596 | None:intergenic |
| CTATGCTTTAATGCTGTGCT+TGG | 0.496091 | 1_4:+21674277 | None:intergenic |
| TATTCATGACTGCTGTGGTT+GGG | 0.496288 | 1_4:-21674231 | Msa0156060:CDS |
| TCTGCATCACGAAAGGGTAA+TGG | 0.496655 | 1_4:+21672339 | None:intergenic |
| GAGAAGTTGTACCTGAAGAC+AGG | 0.507117 | 1_4:+21674983 | None:intergenic |
| GAGTAGCCAAAGTCTCCTTT+GGG | 0.508035 | 1_4:+21682762 | None:intergenic |
| ACGAGAGAAAATCTCGGCGT+TGG | 0.512373 | 1_4:+21680623 | None:intergenic |
| CTCTATGTTTGAGAGAAAGT+AGG | 0.513312 | 1_4:+21682921 | None:intergenic |
| GTATTCATGACTGCTGTGGT+TGG | 0.517470 | 1_4:-21674232 | Msa0156060:CDS |
| CATTGGAGGTTATTAGAAGA+GGG | 0.518967 | 1_4:-21672558 | Msa0156060:CDS |
| ATTTCTGTTAGCTTCATTGG+AGG | 0.519416 | 1_4:-21672572 | Msa0156060:CDS |
| TGAGAACCTTTCTGCACTTG+AGG | 0.521867 | 1_4:+21675711 | None:intergenic |
| AGTGCAGAAAGGTTCTCATA+TGG | 0.524689 | 1_4:-21675706 | Msa0156060:CDS |
| GAAAGTAGGTGAAGTAGGGG+GGG | 0.526768 | 1_4:+21682935 | None:intergenic |
| TTAAACAACTTCTTACTGAC+CGG | 0.527734 | 1_4:-21680677 | Msa0156060:CDS |
| TGTTGCACATTTGGCTAACA+TGG | 0.528897 | 1_4:-21673321 | Msa0156060:CDS |
| TCATTCTGGAAGATTATACA+TGG | 0.529538 | 1_4:-21673513 | Msa0156060:CDS |
| GAGAAAGTAGGTGAAGTAGG+GGG | 0.530029 | 1_4:+21682933 | None:intergenic |
| TCCGAATCTGCATCACGAAA+GGG | 0.530756 | 1_4:+21672333 | None:intergenic |
| TGTCTGCAATGGTTGCAGCC+GGG | 0.531098 | 1_4:-21673289 | Msa0156060:CDS |
| GATGGAGGATAGTGAAGAAG+AGG | 0.531469 | 1_4:-21680871 | Msa0156060:CDS |
| ATCCGAATCTGCATCACGAA+AGG | 0.533826 | 1_4:+21672332 | None:intergenic |
| AGTCCTATAAAAGAAGGGTA+TGG | 0.535476 | 1_4:-21678598 | Msa0156060:CDS |
| GGGATGGCATCAACATTGCC+CGG | 0.536864 | 1_4:+21674166 | None:intergenic |
| GGCTGATCAACTTACCAGCC+AGG | 0.540561 | 1_4:-21673714 | Msa0156060:intron |
| AGAGAGTGAGTTTCTTGAGA+GGG | 0.543146 | 1_4:-21680739 | Msa0156060:CDS |
| TGTTAGACTAATGGATGAAG+TGG | 0.544462 | 1_4:-21675796 | Msa0156060:CDS |
| CGGATGAAGCAGAAACGAGT+TGG | 0.546512 | 1_4:+21673906 | None:intergenic |
| TTAAAACCTCAAGTGCAGAA+AGG | 0.546793 | 1_4:-21675717 | Msa0156060:CDS |
| GGATGAAGCAGAAACGAGTT+GGG | 0.549629 | 1_4:+21673907 | None:intergenic |
| AGGTTATTAGAAGAGGGCAT+TGG | 0.550858 | 1_4:-21672552 | Msa0156060:CDS |
| GCCGGGGCTAGAGTAACATA+TGG | 0.552597 | 1_4:-21673272 | Msa0156060:CDS |
| CTAGGTGAGGAGGAAAATGA+TGG | 0.553948 | 1_4:-21680889 | Msa0156060:intron |
| TAGACTGCTTCCATATAAGC+TGG | 0.554839 | 1_4:+21675007 | None:intergenic |
| AAGCTCAACTAATACCAGAA+TGG | 0.558338 | 1_4:-21682869 | Msa0156060:CDS |
| AGAGAAAGTAGGTGAAGTAG+GGG | 0.560209 | 1_4:+21682932 | None:intergenic |
| CGTTATAGCCTTTGTTGGTG+TGG | 0.564522 | 1_4:+21678657 | None:intergenic |
| GAAGTTATTACCGACAAAGA+AGG | 0.566027 | 1_4:+21675680 | None:intergenic |
| ATTACTACAGGTTCTTCTAG+TGG | 0.568364 | 1_4:-21673747 | Msa0156060:intron |
| GTCTGCAATGGTTGCAGCCG+GGG | 0.570056 | 1_4:-21673288 | Msa0156060:CDS |
| AAGTGGGGCCTGTTCAAACA+AGG | 0.571452 | 1_4:-21672603 | Msa0156060:CDS |
| TGTGATAATCACTTCTGTGA+TGG | 0.578841 | 1_4:-21673219 | Msa0156060:CDS |
| GAGAGTGAGTTTCTTGAGAG+GGG | 0.579909 | 1_4:-21680738 | Msa0156060:CDS |
| GACTGTCATGCACTTCAAAG+TGG | 0.581782 | 1_4:-21672620 | Msa0156060:CDS |
| TCATTGGAGGTTATTAGAAG+AGG | 0.582043 | 1_4:-21672559 | Msa0156060:CDS |
| AACGAGCATCTAAACAATGT+TGG | 0.586936 | 1_4:-21672387 | Msa0156060:CDS |
| ATCCTAACTCCAGAAATGCA+TGG | 0.587354 | 1_4:-21673145 | Msa0156060:CDS |
| TCCAGCCACCACACCAACAA+AGG | 0.591128 | 1_4:-21678665 | Msa0156060:CDS |
| TATAGCCTTTGTTGGTGTGG+TGG | 0.591860 | 1_4:+21678660 | None:intergenic |
| GTCTCCAAATGCCTTAGCAA+TGG | 0.595254 | 1_4:+21673590 | None:intergenic |
| GGGCTAGAGTAACATATGGC+AGG | 0.598969 | 1_4:-21673268 | Msa0156060:CDS |
| GGGCGATAGAATATATCTAA+CGG | 0.599745 | 1_4:+21673927 | None:intergenic |
| ACTGTCATGCACTTCAAAGT+GGG | 0.599916 | 1_4:-21672619 | Msa0156060:CDS |
| CACTGTATTCATGACTGCTG+TGG | 0.600052 | 1_4:-21674236 | Msa0156060:CDS |
| TGAATAGTCCTATAAAAGAA+GGG | 0.602645 | 1_4:-21678603 | Msa0156060:CDS |
| GCCATATGTTACTCTAGCCC+CGG | 0.604469 | 1_4:+21673271 | None:intergenic |
| ATATACAGATACCATTGCTA+AGG | 0.605910 | 1_4:-21673601 | Msa0156060:intron |
| TCGTGTTATGCTAGGTGAGG+AGG | 0.606435 | 1_4:-21680899 | Msa0156060:intron |
| CAGAATGACAAGTTTCAGGA+TGG | 0.607771 | 1_4:+21673528 | None:intergenic |
| GATGCAGATTCGGATAATTG+AGG | 0.609576 | 1_4:-21672324 | Msa0156060:exon |
| GGTGAGGAGGAAAATGATGG+AGG | 0.614036 | 1_4:-21680886 | Msa0156060:CDS |
| GCGGATAGAAGAATGTAAAG+AGG | 0.619017 | 1_4:+21682959 | None:intergenic |
| GAGAGAAAATACCACACAAG+TGG | 0.620395 | 1_4:+21675041 | None:intergenic |
| AAATATGGTGAAATTCTCAA+AGG | 0.620764 | 1_4:-21682898 | Msa0156060:exon |
| AAGAGAGTGAGTTTCTTGAG+AGG | 0.626823 | 1_4:-21680740 | Msa0156060:CDS |
| GGGAGAACGAGAGAAAATCT+CGG | 0.628260 | 1_4:+21680617 | None:intergenic |
| ATTACTAGTGTATAAGACGA+TGG | 0.628674 | 1_4:-21673358 | Msa0156060:intron |
| GCAATCTTGGCCCACTTGTG+TGG | 0.629460 | 1_4:-21675052 | Msa0156060:CDS |
| ACATTTCATTAGTTCAGACA+AGG | 0.639364 | 1_4:-21676000 | Msa0156060:intron |
| ATGCAACCTATACATGTGGA+AGG | 0.640304 | 1_4:-21674338 | Msa0156060:CDS |
| CAGAAGAAGAATTCCAGGGA+TGG | 0.644693 | 1_4:+21674150 | None:intergenic |
| GTTGCACATTTGGCTAACAT+GGG | 0.650024 | 1_4:-21673320 | Msa0156060:CDS |
| TTGCACATTTGGCTAACATG+GGG | 0.654335 | 1_4:-21673319 | Msa0156060:CDS |
| AGAGAAAATACCACACAAGT+GGG | 0.657293 | 1_4:+21675042 | None:intergenic |
| AAAGAAGAACAAGCTCCCAA+AGG | 0.658529 | 1_4:-21682777 | Msa0156060:CDS |
| CTGTCATGCACTTCAAAGTG+GGG | 0.659135 | 1_4:-21672618 | Msa0156060:CDS |
| AGAAGTTGTACCTGAAGACA+GGG | 0.667478 | 1_4:+21674984 | None:intergenic |
| TAACCAGAAGAAGAATTCCA+GGG | 0.669293 | 1_4:+21674146 | None:intergenic |
| ACATTAAAAGCATACCTGGA+GGG | 0.674727 | 1_4:+21673448 | None:intergenic |
| ATGGATGCAACCTATACATG+TGG | 0.686696 | 1_4:-21674342 | Msa0156060:CDS |
| GGGGAAGTATGTGTCTGCAA+TGG | 0.699297 | 1_4:-21673300 | Msa0156060:CDS |
| AAACTATGTTACGAATAACA+CGG | 0.734521 | 1_4:+21673886 | None:intergenic |
| TCGGCGTTGGAATTTCTCGG+CGG | 0.748932 | 1_4:+21680636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCATATATGTTTTTTTTA+AGG | - | chr1_4:21672788-21672807 | Msa0156060:intron | 10.0% |
| !!! | TTCTTAATTTTTTTTTGTTA+GGG | + | chr1_4:21673976-21673995 | None:intergenic | 10.0% |
| !!! | TTTCTTAATTTTTTTTTGTT+AGG | + | chr1_4:21673977-21673996 | None:intergenic | 10.0% |
| !!! | TCATGAATAATAATTTTTTT+GGG | + | chr1_4:21674830-21674849 | None:intergenic | 10.0% |
| !!! | TTCATGAATAATAATTTTTT+TGG | + | chr1_4:21674831-21674850 | None:intergenic | 10.0% |
| !!! | TAGCTAAATATTTTTTATTT+GGG | + | chr1_4:21674883-21674902 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTGTTAACATAT+CGG | - | chr1_4:21675259-21675278 | Msa0156060:intron | 10.0% |
| !! | TATCTTTAAATTTAATATGT+TGG | - | chr1_4:21675511-21675530 | Msa0156060:intron | 10.0% |
| !! | AAAACAAATGATTAATTATT+TGG | + | chr1_4:21675814-21675833 | None:intergenic | 10.0% |
| !!! | TCAAATAAATTTTCTTTTTT+TGG | + | chr1_4:21676730-21676749 | None:intergenic | 10.0% |
| !!! | TTATTTCTTTTTAATTAATG+AGG | - | chr1_4:21676760-21676779 | Msa0156060:intron | 10.0% |
| !! | TTTGTATGATAATATATAAT+TGG | - | chr1_4:21677047-21677066 | Msa0156060:intron | 10.0% |
| !! | TTAAAATTGATAAATGTTAA+CGG | - | chr1_4:21677423-21677442 | Msa0156060:intron | 10.0% |
| !! | TATAATTAAAAAACAAACTT+TGG | - | chr1_4:21677516-21677535 | Msa0156060:intron | 10.0% |
| !! | ATAATTAAAAAACAAACTTT+GGG | - | chr1_4:21677517-21677536 | Msa0156060:intron | 10.0% |
| !!! | ATCTAATTTTTTTATAGTTT+AGG | - | chr1_4:21678359-21678378 | Msa0156060:intron | 10.0% |
| !! | TTACCAAAAAAATAAATTAA+AGG | - | chr1_4:21679031-21679050 | Msa0156060:intron | 10.0% |
| !! | AAAAAAATAAATTAAAGGAA+GGG | - | chr1_4:21679036-21679055 | Msa0156060:intron | 10.0% |
| !!! | TATAATATTTTGATTATGAA+AGG | - | chr1_4:21679167-21679186 | Msa0156060:intron | 10.0% |
| !! | TATAATCAGATAATATAATT+TGG | + | chr1_4:21679541-21679560 | None:intergenic | 10.0% |
| !! | TAAAATTATAAAATCAACTA+AGG | + | chr1_4:21679862-21679881 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTGTTGAAAAA+TGG | + | chr1_4:21680075-21680094 | None:intergenic | 10.0% |
| !! | CTGAAAATAAAAAAAATTAA+GGG | + | chr1_4:21680515-21680534 | None:intergenic | 10.0% |
| !!! | TATGAAGTTTATTAGTTTTT+GGG | - | chr1_4:21672325-21672344 | Msa0156060:exon | 15.0% |
| !! | AAACAAAAGAAAAATCATAA+TGG | + | chr1_4:21672407-21672426 | None:intergenic | 15.0% |
| !! | TGAAACTTTATACTATTATT+TGG | + | chr1_4:21672586-21672605 | None:intergenic | 15.0% |
| !!! | TTTTTAATCTATACAAATCA+AGG | + | chr1_4:21672894-21672913 | None:intergenic | 15.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | + | chr1_4:21673000-21673019 | None:intergenic | 15.0% |
| !!! | TTTTATTGAACTATATAGTT+TGG | + | chr1_4:21673333-21673352 | None:intergenic | 15.0% |
| !!! | TTTAACTTTCTTAATCATTT+GGG | + | chr1_4:21673457-21673476 | None:intergenic | 15.0% |
| !!! | ATTTAACTTTCTTAATCATT+TGG | + | chr1_4:21673458-21673477 | None:intergenic | 15.0% |
| !!! | TTATATATTTTATTCACTAG+AGG | + | chr1_4:21673555-21673574 | None:intergenic | 15.0% |
| !!! | TTTTTCTACTTTTCTTTTTT+GGG | - | chr1_4:21673847-21673866 | Msa0156060:intron | 15.0% |
| !! | TTCATAAAAAAATTACAAAG+AGG | + | chr1_4:21674443-21674462 | None:intergenic | 15.0% |
| !! | AGACATATATATTTACATAA+AGG | + | chr1_4:21674589-21674608 | None:intergenic | 15.0% |
| !!! | CATGAATAATAATTTTTTTG+GGG | + | chr1_4:21674829-21674848 | None:intergenic | 15.0% |
| !!! | AGCTAAATATTTTTTATTTG+GGG | + | chr1_4:21674882-21674901 | None:intergenic | 15.0% |
| !!! | GTAGCTAAATATTTTTTATT+TGG | + | chr1_4:21674884-21674903 | None:intergenic | 15.0% |
| !!! | TTCAACAAATAAATTTGTTT+GGG | + | chr1_4:21674907-21674926 | None:intergenic | 15.0% |
| !!! | TTTCAACAAATAAATTTGTT+TGG | + | chr1_4:21674908-21674927 | None:intergenic | 15.0% |
| !!! | TTGTATTAATTTGACAATTT+CGG | - | chr1_4:21674971-21674990 | Msa0156060:intron | 15.0% |
| !!! | CCAATAAATTATAACTTTTT+AGG | + | chr1_4:21675476-21675495 | None:intergenic | 15.0% |
| !! | CCTAAAAAGTTATAATTTAT+TGG | - | chr1_4:21675473-21675492 | Msa0156060:intron | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_4:21675716-21675735 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTCATAAGTGT+TGG | - | chr1_4:21675722-21675741 | Msa0156060:CDS | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_4:21675716-21675735 | None:intergenic | 15.0% |
| !! | TTAGTAAAACTATACAAAAT+TGG | - | chr1_4:21675867-21675886 | Msa0156060:intron | 15.0% |
| !!! | TTTTCTAATCTAATTTGATA+AGG | - | chr1_4:21677139-21677158 | Msa0156060:intron | 15.0% |
| !!! | ATCGAATAAATTATTTTCAT+CGG | + | chr1_4:21677800-21677819 | None:intergenic | 15.0% |
| !! | AAATGAAACAAAAAAAATTG+GGG | + | chr1_4:21678239-21678258 | None:intergenic | 15.0% |
| !! | CAAATGAAACAAAAAAAATT+GGG | + | chr1_4:21678240-21678259 | None:intergenic | 15.0% |
| !! | TCAAATGAAACAAAAAAAAT+TGG | + | chr1_4:21678241-21678260 | None:intergenic | 15.0% |
| !! | TAGCTAAATATATAATAATG+GGG | + | chr1_4:21678292-21678311 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATAATAAT+GGG | + | chr1_4:21678293-21678312 | None:intergenic | 15.0% |
| !!! | CTTCCTTTAATTTATTTTTT+TGG | + | chr1_4:21679037-21679056 | None:intergenic | 15.0% |
| !! | CAAAAAAATAAATTAAAGGA+AGG | - | chr1_4:21679035-21679054 | Msa0156060:intron | 15.0% |
| !!! | TTTAAAATAACCAAATCTTA+TGG | + | chr1_4:21679088-21679107 | None:intergenic | 15.0% |
| !!! | TAATACTTTTTTATACAAGT+AGG | + | chr1_4:21679416-21679435 | None:intergenic | 15.0% |
| !!! | GAAGAATAATATTTTGATTT+GGG | + | chr1_4:21679443-21679462 | None:intergenic | 15.0% |
| !!! | TGAAGAATAATATTTTGATT+TGG | + | chr1_4:21679444-21679463 | None:intergenic | 15.0% |
| !!! | TATAATTTTATTTTCTCTAC+AGG | - | chr1_4:21679872-21679891 | Msa0156060:intron | 15.0% |
| !!! | ATAATTTTATTTTCTCTACA+GGG | - | chr1_4:21679873-21679892 | Msa0156060:intron | 15.0% |
| !!! | AAAATGTCATATCTTATTTT+TGG | + | chr1_4:21680052-21680071 | None:intergenic | 15.0% |
| !! | GCTGAAAATAAAAAAAATTA+AGG | + | chr1_4:21680516-21680535 | None:intergenic | 15.0% |
| !! | AAACAAAACTAAACTAAAAA+TGG | - | chr1_4:21680871-21680890 | Msa0156060:CDS | 15.0% |
| !!! | GTACTAGTTATTATTTTATA+AGG | - | chr1_4:21680925-21680944 | Msa0156060:intron | 15.0% |
| !! | TGAAAAACTGTAAAAATAAA+CGG | + | chr1_4:21681023-21681042 | None:intergenic | 15.0% |
| !! | TTGAAATTATTGTTAGAATT+TGG | - | chr1_4:21681949-21681968 | Msa0156060:intron | 15.0% |
| !!! | AATATTTTATTTAGGCTAAT+CGG | + | chr1_4:21682222-21682241 | None:intergenic | 15.0% |
| !!! | ATTAGCCTAAATAAAATATT+AGG | - | chr1_4:21682222-21682241 | Msa0156060:intron | 15.0% |
| !! | TTAGCCTAAATAAAATATTA+GGG | - | chr1_4:21682223-21682242 | Msa0156060:intron | 15.0% |
| !! | TCACTTTAATTAATCAAAAA+TGG | - | chr1_4:21682295-21682314 | Msa0156060:intron | 15.0% |
| !! | TTCTTAAAACTGAAAAAAAA+AGG | + | chr1_4:21682508-21682527 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATCATTTCAACA+AGG | + | chr1_4:21682888-21682907 | None:intergenic | 15.0% |
| !!! | GTATGAAGTTTATTAGTTTT+TGG | - | chr1_4:21672324-21672343 | Msa0156060:exon | 20.0% |
| !!! | TTTTTGTTTTTGTTGCAATA+AGG | + | chr1_4:21672473-21672492 | None:intergenic | 20.0% |
| !!! | CTTCAATCTTTTATATGATA+TGG | - | chr1_4:21672551-21672570 | Msa0156060:CDS | 20.0% |
| !! | GTAACATATATTTCTTACAA+AGG | - | chr1_4:21672740-21672759 | Msa0156060:intron | 20.0% |
| !! | CAATTTCTTGATAAAATCTA+AGG | + | chr1_4:21673001-21673020 | None:intergenic | 20.0% |
| !! | AATAGTGTAACATAAGTAAT+AGG | + | chr1_4:21673482-21673501 | None:intergenic | 20.0% |
| !!! | TTTTTCATTGGTAGAAAAAA+AGG | + | chr1_4:21673517-21673536 | None:intergenic | 20.0% |
| !!! | AACTACTTTTTAACAACTTT+TGG | - | chr1_4:21673593-21673612 | Msa0156060:CDS | 20.0% |
| !! | ACTCAAAACATAATTCAAAA+AGG | - | chr1_4:21673755-21673774 | Msa0156060:intron | 20.0% |
| !! | AAAAAGAAAAGTAGAAAAAG+AGG | + | chr1_4:21673846-21673865 | None:intergenic | 20.0% |
| !!! | CTTTTTCTACTTTTCTTTTT+TGG | - | chr1_4:21673846-21673865 | Msa0156060:intron | 20.0% |
| !!! | TGATTGAATTTTATTGTCTA+TGG | + | chr1_4:21674033-21674052 | None:intergenic | 20.0% |
| !!! | AAAATTTTGATTTGCTTCAT+TGG | + | chr1_4:21674641-21674660 | None:intergenic | 20.0% |
| !! | ATTATTATTCATGAATGAGT+CGG | - | chr1_4:21674836-21674855 | Msa0156060:intron | 20.0% |
| !!! | TCAACAAATAAATTTGTTTG+GGG | + | chr1_4:21674906-21674925 | None:intergenic | 20.0% |
| !! | AATAACTTATTTGTTTACGT+TGG | - | chr1_4:21675082-21675101 | Msa0156060:CDS | 20.0% |
| !!! | TTAACATATCGGTTAAATTT+AGG | - | chr1_4:21675270-21675289 | Msa0156060:intron | 20.0% |
| !!! | ATTTTTAAGTTAAGTACCTA+AGG | - | chr1_4:21675327-21675346 | Msa0156060:intron | 20.0% |
| !! | CTAAAATTAAACAAAACCTT+AGG | + | chr1_4:21675346-21675365 | None:intergenic | 20.0% |
| !!! | GCAAATTTTTACCATAAAAA+AGG | + | chr1_4:21675415-21675434 | None:intergenic | 20.0% |
| !!! | AAAACAAATGATTAGTTAGT+TGG | + | chr1_4:21675690-21675709 | None:intergenic | 20.0% |
| !!! | TTTTGCATGTTAATCATATA+TGG | + | chr1_4:21676118-21676137 | None:intergenic | 20.0% |
| !! | GTAATAAGAAAAATCCATAA+CGG | + | chr1_4:21676146-21676165 | None:intergenic | 20.0% |
| !! | ATATCAACTTTAGCAAAAAA+TGG | - | chr1_4:21676224-21676243 | Msa0156060:intron | 20.0% |
| !! | AAAAAAAGGAAAACCTAAAA+TGG | - | chr1_4:21676283-21676302 | Msa0156060:intron | 20.0% |
| !! | GTGATAGAGATAAAAATATA+CGG | + | chr1_4:21676610-21676629 | None:intergenic | 20.0% |
| !!! | TCAAGACATTTCTATTTTTA+GGG | - | chr1_4:21676867-21676886 | Msa0156060:CDS | 20.0% |
| !! | AATATATAATTGGATGACTA+TGG | - | chr1_4:21677057-21677076 | Msa0156060:intron | 20.0% |
| !! | ATATATAATTGGATGACTAT+GGG | - | chr1_4:21677058-21677077 | Msa0156060:intron | 20.0% |
| !! | TTGATAAGGTAGAATAAAAA+TGG | - | chr1_4:21677153-21677172 | Msa0156060:intron | 20.0% |
| !! | TTTATGAGTAGAACAAATAT+TGG | + | chr1_4:21677331-21677350 | None:intergenic | 20.0% |
| !! | TAATTTCCAAAAATAAGAAG+AGG | - | chr1_4:21677543-21677562 | Msa0156060:intron | 20.0% |
| !! | GAATAACACATAATATATGT+AGG | - | chr1_4:21677636-21677655 | Msa0156060:intron | 20.0% |
| !!! | AAAAGTACTTATGGTAATTT+GGG | + | chr1_4:21678029-21678048 | None:intergenic | 20.0% |
| !!! | AAAAAGTACTTATGGTAATT+TGG | + | chr1_4:21678030-21678049 | None:intergenic | 20.0% |
| !!! | CTTATGAAAAAAAGTACTTA+TGG | + | chr1_4:21678038-21678057 | None:intergenic | 20.0% |
| !!! | TAACAACATTCTATTGTTTT+TGG | - | chr1_4:21678069-21678088 | Msa0156060:intron | 20.0% |
| !! | GGTAGCTAAATATATAATAA+TGG | + | chr1_4:21678294-21678313 | None:intergenic | 20.0% |
| !! | ATGACAATTAAACTTATTTG+AGG | + | chr1_4:21678315-21678334 | None:intergenic | 20.0% |
| !! | TTATTCATGCAAACTATATT+GGG | + | chr1_4:21678683-21678702 | None:intergenic | 20.0% |
| !! | TTTATTCATGCAAACTATAT+TGG | + | chr1_4:21678684-21678703 | None:intergenic | 20.0% |
| !! | AAGTTTACTTTACTTTCATT+TGG | + | chr1_4:21678709-21678728 | None:intergenic | 20.0% |
| !! | TCAAAATATTATTCTTCATC+AGG | - | chr1_4:21679446-21679465 | Msa0156060:intron | 20.0% |
| !!! | GGTTTTTAAATAAAAGAGTT+AGG | + | chr1_4:21680416-21680435 | None:intergenic | 20.0% |
| !! | TCAAATTGAAAAGTTATGAT+TGG | - | chr1_4:21680451-21680470 | Msa0156060:intron | 20.0% |
| !!! | TGTTAGTTAGTACATTTTAA+TGG | + | chr1_4:21680567-21680586 | None:intergenic | 20.0% |
| !!! | ATATTATTATTTGAGACGAA+CGG | - | chr1_4:21680903-21680922 | Msa0156060:intron | 20.0% |
| !!! | CATACATTTTTTGAAACAAT+TGG | - | chr1_4:21681149-21681168 | Msa0156060:intron | 20.0% |
| !! | TGATTTAATATCATTACTAC+AGG | - | chr1_4:21681228-21681247 | Msa0156060:intron | 20.0% |
| !!! | ATATAACATAAGATTTTACC+TGG | + | chr1_4:21681294-21681313 | None:intergenic | 20.0% |
| !! | TACATTGTATCAATTGTATT+GGG | - | chr1_4:21681792-21681811 | Msa0156060:intron | 20.0% |
| !!! | ATATTTTATTTAGGCTAATC+GGG | + | chr1_4:21682221-21682240 | None:intergenic | 20.0% |
| !!! | ACAACCCTAATATTTTATTT+AGG | + | chr1_4:21682230-21682249 | None:intergenic | 20.0% |
| !! | AATTAATCAAAAATGGACAT+TGG | - | chr1_4:21682302-21682321 | Msa0156060:intron | 20.0% |
| !! | TATACAAAGTCATAATTTCT+AGG | + | chr1_4:21682830-21682849 | None:intergenic | 20.0% |
| ! | TGTAAAGAGGAATATGTTAT+AGG | + | chr1_4:21672018-21672037 | None:intergenic | 25.0% |
| ! | AAATATGGTGAAATTCTCAA+AGG | - | chr1_4:21672089-21672108 | Msa0156060:three_prime_UTR | 25.0% |
| ! | TAACAAACCAAATATCATTC+AGG | - | chr1_4:21672302-21672321 | Msa0156060:three_prime_UTR | 25.0% |
| ! | TCAAGACAATGAAATGAAAA+TGG | - | chr1_4:21672514-21672533 | Msa0156060:intron | 25.0% |
| !! | AAAAGATTGAAGAAAAGTGT+TGG | + | chr1_4:21672543-21672562 | None:intergenic | 25.0% |
| !! | TATTGGCTAACATTAATTTC+AGG | + | chr1_4:21673025-21673044 | None:intergenic | 25.0% |
| ! | AGAAAAATTCAAGAATGACA+TGG | + | chr1_4:21673129-21673148 | None:intergenic | 25.0% |
| !! | CTGATTGTGTTATTGTAAAT+AGG | + | chr1_4:21673183-21673202 | None:intergenic | 25.0% |
| ! | TTTACAATAACACAATCAGA+TGG | - | chr1_4:21673184-21673203 | Msa0156060:CDS | 25.0% |
| !! | CAAATGATATTTAGAATGTG+AGG | - | chr1_4:21673287-21673306 | Msa0156060:CDS | 25.0% |
| ! | ACTTGAACGATTAATCTTTA+TGG | + | chr1_4:21673376-21673395 | None:intergenic | 25.0% |
| !!! | ATGAATGAGTGTTTTTTCAT+TGG | + | chr1_4:21673529-21673548 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr1_4:21680238-21680257 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr1_4:21680225-21680244 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr1_4:21673690-21673709 | Msa0156060:intron | 25.0% |
| ! | AAACATAATTCAAAAAGGAG+TGG | - | chr1_4:21673760-21673779 | Msa0156060:intron | 25.0% |
| !! | TACCATTAAAGTTAGTTTAG+TGG | - | chr1_4:21673805-21673824 | Msa0156060:intron | 25.0% |
| !!! | AGAAAAAGAGGTTTTAGAAA+AGG | + | chr1_4:21673834-21673853 | None:intergenic | 25.0% |
| !! | ATAAGGTGAACCAATTTTAT+AGG | - | chr1_4:21674220-21674239 | Msa0156060:CDS | 25.0% |
| !! | TCTCTTGTTTCCTATAAAAT+TGG | + | chr1_4:21674233-21674252 | None:intergenic | 25.0% |
| !! | TGAATAATTTGAGCTTTGAT+CGG | + | chr1_4:21674394-21674413 | None:intergenic | 25.0% |
| ! | ATTTCGATAACAACAACTTA+AGG | + | chr1_4:21675370-21675389 | None:intergenic | 25.0% |
| !!! | CTAAAAACACTCCTTTTTTA+TGG | - | chr1_4:21675401-21675420 | Msa0156060:intron | 25.0% |
| ! | GGTAAAACTATACAAATTTG+TGG | - | chr1_4:21675743-21675762 | Msa0156060:CDS | 25.0% |
| ! | ACTATACAAAATTGGATCTT+TGG | - | chr1_4:21675875-21675894 | Msa0156060:intron | 25.0% |
| !! | GTATGGAAATTGTATTTCTA+AGG | - | chr1_4:21675970-21675989 | Msa0156060:intron | 25.0% |
| !! | AAAATTTTGTTCACGTGATA+TGG | - | chr1_4:21676077-21676096 | Msa0156060:intron | 25.0% |
| ! | AAATTCAGAAACATCACAAA+TGG | - | chr1_4:21676193-21676212 | Msa0156060:intron | 25.0% |
| !! | ATTTTGTTAATTCAGCAACA+AGG | - | chr1_4:21676252-21676271 | Msa0156060:intron | 25.0% |
| !! | TTTTGTTAATTCAGCAACAA+GGG | - | chr1_4:21676253-21676272 | Msa0156060:intron | 25.0% |
| ! | TGAATAGTCCTATAAAAGAA+GGG | - | chr1_4:21676384-21676403 | Msa0156060:intron | 25.0% |
| !!! | GTCAAGACATTTCTATTTTT+AGG | - | chr1_4:21676866-21676885 | Msa0156060:CDS | 25.0% |
| ! | CATGATTGGATCAATTAAAT+TGG | + | chr1_4:21676914-21676933 | None:intergenic | 25.0% |
| ! | TTTCATCCATAATATTGAAG+TGG | + | chr1_4:21677209-21677228 | None:intergenic | 25.0% |
| !!! | TTTTCTCCTCTTCTTATTTT+TGG | + | chr1_4:21677552-21677571 | None:intergenic | 25.0% |
| ! | ATTGAGGTGTATAAGTAAAA+AGG | - | chr1_4:21677576-21677595 | Msa0156060:intron | 25.0% |
| ! | GAAATAAATGTGAAAAAGTG+AGG | + | chr1_4:21677685-21677704 | None:intergenic | 25.0% |
| ! | TTTAGATATTGAACAATCTG+AGG | + | chr1_4:21677754-21677773 | None:intergenic | 25.0% |
| ! | AAGGAATTACAAATACGTAA+AGG | + | chr1_4:21678004-21678023 | None:intergenic | 25.0% |
| !! | TTTTAGTGTACCATAAGATT+TGG | - | chr1_4:21679075-21679094 | Msa0156060:intron | 25.0% |
| !!! | TTATGTGGTTTTGCAATAAT+TGG | - | chr1_4:21679131-21679150 | Msa0156060:intron | 25.0% |
| ! | TAGACATAGATTTGATATAG+TGG | + | chr1_4:21679332-21679351 | None:intergenic | 25.0% |
| ! | CTATGTCTATATTAGTGAAT+TGG | - | chr1_4:21679343-21679362 | Msa0156060:intron | 25.0% |
| ! | ATAATAGGAAAATACTTGTG+TGG | + | chr1_4:21679826-21679845 | None:intergenic | 25.0% |
| ! | GGTTTAATGTATGGAATAAT+AGG | + | chr1_4:21679841-21679860 | None:intergenic | 25.0% |
| ! | ATCAACTAAGGTTTAATGTA+TGG | + | chr1_4:21679850-21679869 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr1_4:21673690-21673709 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr1_4:21680225-21680244 | Msa0156060:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr1_4:21680238-21680257 | Msa0156060:intron | 25.0% |
| !! | ATTTGAAACATCATGTTTGA+CGG | + | chr1_4:21680437-21680456 | None:intergenic | 25.0% |
| ! | AAACTATGTTACGAATAACA+CGG | + | chr1_4:21681104-21681123 | None:intergenic | 25.0% |
| ! | ATGAAACTTACCCTATAAAA+TGG | + | chr1_4:21681132-21681151 | None:intergenic | 25.0% |
| !!! | TCTCATTTTTGCCATATTTT+TGG | - | chr1_4:21681512-21681531 | Msa0156060:intron | 25.0% |
| ! | CTACATTGTATCAATTGTAT+TGG | - | chr1_4:21681791-21681810 | Msa0156060:intron | 25.0% |
| !!! | AGTATATGCTCTTATTTTTC+AGG | + | chr1_4:21681885-21681904 | None:intergenic | 25.0% |
| ! | TCAATACTTAGATTAGAAAG+AGG | + | chr1_4:21681933-21681952 | None:intergenic | 25.0% |
| !! | TTATTGTTAGAATTTGGCTT+CGG | - | chr1_4:21681955-21681974 | Msa0156060:intron | 25.0% |
| !!! | CAAATGTTTTGACAAATGTT+GGG | + | chr1_4:21682053-21682072 | None:intergenic | 25.0% |
| !!! | TCAAATGTTTTGACAAATGT+TGG | + | chr1_4:21682054-21682073 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGCGTGATTTTTT+AGG | + | chr1_4:21682178-21682197 | None:intergenic | 25.0% |
| !! | CAAAAACAACTGTATCTTTT+TGG | - | chr1_4:21682189-21682208 | Msa0156060:intron | 25.0% |
| ! | ATAAAATATTAGGGTTGTGT+CGG | - | chr1_4:21682232-21682251 | Msa0156060:intron | 25.0% |
| !!! | TTTTTTCTCAACATGTCTAT+AGG | + | chr1_4:21682716-21682735 | None:intergenic | 25.0% |
| !! | ATGACTTTGTATACAACTTT+TGG | - | chr1_4:21682837-21682856 | Msa0156060:CDS | 25.0% |
| ! | GAAGATTGTAAATGTCAATT+TGG | - | chr1_4:21682933-21682952 | Msa0156060:five_prime_UTR | 25.0% |
| CTCTCAAACATAGAGAAATA+TGG | - | chr1_4:21672074-21672093 | Msa0156060:three_prime_UTR | 30.0% | |
| CTTCATACCTGAATGATATT+TGG | + | chr1_4:21672312-21672331 | None:intergenic | 30.0% | |
| ! | TTGTTGTTCTGTAACATGTT+AGG | - | chr1_4:21672358-21672377 | Msa0156060:CDS | 30.0% |
| TGTTGTTCTGTAACATGTTA+GGG | - | chr1_4:21672359-21672378 | Msa0156060:CDS | 30.0% | |
| TAATGAAGCCATGAATGAAA+GGG | + | chr1_4:21672692-21672711 | None:intergenic | 30.0% | |
| TGTTAGCAACAATATACATC+CGG | - | chr1_4:21672826-21672845 | Msa0156060:intron | 30.0% | |
| AGAAAGATTCAAGAATGACA+TGG | - | chr1_4:21672963-21672982 | Msa0156060:intron | 30.0% | |
| CAATAAAATCTCAACTTGAC+CGG | - | chr1_4:21673040-21673059 | Msa0156060:intron | 30.0% | |
| ATCAGATGGTACAAAATTCA+CGG | - | chr1_4:21673198-21673217 | Msa0156060:CDS | 30.0% | |
| ! | GAAATGACATTTAGAATGTG+AGG | - | chr1_4:21673222-21673241 | Msa0156060:CDS | 30.0% |
| TTTCTTAATCATTTGGGTCA+AGG | + | chr1_4:21673451-21673470 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr1_4:21680251-21680270 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr1_4:21673716-21673735 | Msa0156060:CDS | 30.0% | |
| !!! | AAAAGAGGTTTTAGAAAAGG+AGG | + | chr1_4:21673831-21673850 | None:intergenic | 30.0% |
| TAATTATGTCGTGTTATGCT+AGG | - | chr1_4:21674080-21674099 | Msa0156060:intron | 30.0% | |
| TTAAACAACTTCTTACTGAC+CGG | - | chr1_4:21674310-21674329 | Msa0156060:CDS | 30.0% | |
| ! | GAATAATTTGAGCTTTGATC+GGG | + | chr1_4:21674393-21674412 | None:intergenic | 30.0% |
| GATCAAAGCTCAAATTATTC+AGG | - | chr1_4:21674393-21674412 | Msa0156060:intron | 30.0% | |
| !!! | ATTTTGATTTGCTTCATTGG+AGG | + | chr1_4:21674638-21674657 | None:intergenic | 30.0% |
| ACGCAGTTAGACATTAAATA+TGG | + | chr1_4:21674684-21674703 | None:intergenic | 30.0% | |
| TCCTTTGTCCAAGTTTAAAT+CGG | - | chr1_4:21674750-21674769 | Msa0156060:intron | 30.0% | |
| ACACGCTATTTAGAAAAGTT+GGG | + | chr1_4:21675178-21675197 | None:intergenic | 30.0% | |
| ! | AGCTAGCAAATATTTTACGA+GGG | + | chr1_4:21675574-21675593 | None:intergenic | 30.0% |
| ! | AAGCTAGCAAATATTTTACG+AGG | + | chr1_4:21675575-21675594 | None:intergenic | 30.0% |
| TGTTAAATGAGTTTAAGCAG+CGG | + | chr1_4:21675600-21675619 | None:intergenic | 30.0% | |
| ATGTATGTATGTGTGTGTAA+AGG | - | chr1_4:21675779-21675798 | Msa0156060:CDS | 30.0% | |
| CATGCGCACAATAAATATTT+GGG | - | chr1_4:21675898-21675917 | Msa0156060:intron | 30.0% | |
| ATGCGCACAATAAATATTTG+GGG | - | chr1_4:21675899-21675918 | Msa0156060:intron | 30.0% | |
| CATGCAAAATAAAACCGTTA+TGG | - | chr1_4:21676129-21676148 | Msa0156060:intron | 30.0% | |
| ACAAGGGTAAAGACAAAAAA+AGG | - | chr1_4:21676269-21676288 | Msa0156060:intron | 30.0% | |
| !!! | TCAATTCTCATTGCCATTTT+AGG | + | chr1_4:21676299-21676318 | None:intergenic | 30.0% |
| GTGAATAGTCCTATAAAAGA+AGG | - | chr1_4:21676383-21676402 | Msa0156060:intron | 30.0% | |
| ! | GCTTTTGTTGAACTCTATAA+AGG | - | chr1_4:21676464-21676483 | Msa0156060:intron | 30.0% |
| TTAATGAGGCTAATCATATG+TGG | - | chr1_4:21676774-21676793 | Msa0156060:intron | 30.0% | |
| CACGTAAAATGTTGGATAAT+TGG | - | chr1_4:21676810-21676829 | Msa0156060:intron | 30.0% | |
| ! | TTTTGTGACATACTCATGAT+TGG | + | chr1_4:21676928-21676947 | None:intergenic | 30.0% |
| AAATGAGAAATACCCTGATT+TGG | + | chr1_4:21676968-21676987 | None:intergenic | 30.0% | |
| ! | AAATCAGGGTATTTCTCATT+TGG | - | chr1_4:21676967-21676986 | Msa0156060:intron | 30.0% |
| CCATAATATTGAAGTGGTTT+CGG | + | chr1_4:21677203-21677222 | None:intergenic | 30.0% | |
| !! | AAAAATTGGTGTTAATCCTC+TGG | - | chr1_4:21677250-21677269 | Msa0156060:intron | 30.0% |
| CTTAACAATTTGTCAGTTGT+TGG | - | chr1_4:21677367-21677386 | Msa0156060:intron | 30.0% | |
| ACCATTTCAACACAATTGTT+TGG | - | chr1_4:21677399-21677418 | Msa0156060:intron | 30.0% | |
| ACCAAACAATTGTGTTGAAA+TGG | + | chr1_4:21677403-21677422 | None:intergenic | 30.0% | |
| AAGAGGAGAAAATAGTATTG+AGG | - | chr1_4:21677560-21677579 | Msa0156060:intron | 30.0% | |
| CATAATATATGTAGGAGTCA+TGG | - | chr1_4:21677644-21677663 | Msa0156060:intron | 30.0% | |
| ACTTATGGTAATTTGGGTAA+AGG | + | chr1_4:21678023-21678042 | None:intergenic | 30.0% | |
| ! | ATACCTTGTCAAACTTTTTG+AGG | + | chr1_4:21678128-21678147 | None:intergenic | 30.0% |
| TCAAAAAGTTTGACAAGGTA+TGG | - | chr1_4:21678127-21678146 | Msa0156060:intron | 30.0% | |
| ! | TATAATAATGGGGTAGCTAA+AGG | + | chr1_4:21678282-21678301 | None:intergenic | 30.0% |
| CTCTCTTTATAGTTGCTAAA+AGG | + | chr1_4:21678386-21678405 | None:intergenic | 30.0% | |
| ATTTGTACATATGTATGCAG+CGG | + | chr1_4:21678555-21678574 | None:intergenic | 30.0% | |
| TTTAACCCTATTGATCAATC+AGG | - | chr1_4:21678915-21678934 | Msa0156060:intron | 30.0% | |
| ACATTTCATTAGTTCAGACA+AGG | - | chr1_4:21678987-21679006 | Msa0156060:intron | 30.0% | |
| ! | GAGAGTGTATAATGATTATG+TGG | - | chr1_4:21679116-21679135 | Msa0156060:intron | 30.0% |
| ATGAAAGGTTGTTAGACTAA+TGG | - | chr1_4:21679182-21679201 | Msa0156060:intron | 30.0% | |
| TGCTAGCAATGATAGAAAAA+AGG | - | chr1_4:21679236-21679255 | Msa0156060:intron | 30.0% | |
| ! | TAATTTAGAGTTCGGTTGTT+AGG | + | chr1_4:21679481-21679500 | None:intergenic | 30.0% |
| AACCGAACTCTAAATTATCA+GGG | - | chr1_4:21679484-21679503 | Msa0156060:intron | 30.0% | |
| ACTATGTTTATCACACTTAG+TGG | + | chr1_4:21679642-21679661 | None:intergenic | 30.0% | |
| ! | GTTTTGTGTATATGCAATCT+TGG | - | chr1_4:21679922-21679941 | Msa0156060:intron | 30.0% |
| ! | TTTTGGTCATATGAAGAACT+AGG | + | chr1_4:21680035-21680054 | None:intergenic | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr1_4:21680251-21680270 | Msa0156060:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr1_4:21680323-21680342 | None:intergenic | 30.0% |
| ! | TAAGGTCAAACTTTTATCAC+TGG | - | chr1_4:21680943-21680962 | Msa0156060:intron | 30.0% |
| !!! | TAGTTTGCTCTCCATTTTAT+AGG | - | chr1_4:21681118-21681137 | Msa0156060:intron | 30.0% |
| !! | AGTTTGCTCTCCATTTTATA+GGG | - | chr1_4:21681119-21681138 | Msa0156060:intron | 30.0% |
| !!! | TCTTCTAGTGGACTTTTTTA+TGG | - | chr1_4:21681252-21681271 | Msa0156060:intron | 30.0% |
| ATATACAGATACCATTGCTA+AGG | - | chr1_4:21681386-21681405 | Msa0156060:intron | 30.0% | |
| ! | TCATTCTGGAAGATTATACA+TGG | - | chr1_4:21681474-21681493 | Msa0156060:intron | 30.0% |
| ! | TTCAACATTAAAAGCATACC+TGG | + | chr1_4:21681546-21681565 | None:intergenic | 30.0% |
| ATTACTAGTGTATAAGACGA+TGG | - | chr1_4:21681629-21681648 | Msa0156060:intron | 30.0% | |
| ! | ATTGTATTGGGATTTTGTCA+AGG | - | chr1_4:21681804-21681823 | Msa0156060:intron | 30.0% |
| !! | GTCAAAACATTTGATTTGTC+TGG | - | chr1_4:21682060-21682079 | Msa0156060:intron | 30.0% |
| !! | CTAAAACATTTGATTTTGCC+CGG | + | chr1_4:21682129-21682148 | None:intergenic | 30.0% |
| !!! | TGTTTTAGAAAATGTGCAGA+TGG | - | chr1_4:21682141-21682160 | Msa0156060:intron | 30.0% |
| !!! | GTTTTAGAAAATGTGCAGAT+GGG | - | chr1_4:21682142-21682161 | Msa0156060:intron | 30.0% |
| !!! | ATGTTGTTTTAAGAGTGACT+TGG | - | chr1_4:21682339-21682358 | Msa0156060:intron | 30.0% |
| ! | AGAATTTCTGTTAGCTTCAT+TGG | - | chr1_4:21682412-21682431 | Msa0156060:intron | 30.0% |
| ! | TTAGCTGTTCTAAGTTGTTT+AGG | + | chr1_4:21682479-21682498 | None:intergenic | 30.0% |
| !! | AACTTAACTTGTTTGTGAAC+AGG | - | chr1_4:21682571-21682590 | Msa0156060:intron | 30.0% |
| ! | TTGTATACAACTTTTGGTCT+TGG | - | chr1_4:21682843-21682862 | Msa0156060:CDS | 30.0% |
| CTCTATGTTTGAGAGAAAGT+AGG | + | chr1_4:21672069-21672088 | None:intergenic | 35.0% | |
| AAGCTCAACTAATACCAGAA+TGG | - | chr1_4:21672118-21672137 | Msa0156060:three_prime_UTR | 35.0% | |
| ACAAATGCATCTTTCCATTC+TGG | + | chr1_4:21672135-21672154 | None:intergenic | 35.0% | |
| !! | ACTCCATTTTCGATTCGATT+CGG | - | chr1_4:21672244-21672263 | Msa0156060:three_prime_UTR | 35.0% |
| AAACCGAATCGAATCGAAAA+TGG | + | chr1_4:21672250-21672269 | None:intergenic | 35.0% | |
| CTAATGAAGCCATGAATGAA+AGG | + | chr1_4:21672693-21672712 | None:intergenic | 35.0% | |
| !!! | CGGTCAAGTTGAGATTTTAT+TGG | + | chr1_4:21673042-21673061 | None:intergenic | 35.0% |
| GGCCACTAAACTAACTTTAA+TGG | + | chr1_4:21673810-21673829 | None:intergenic | 35.0% | |
| AAAGCTAGTGAAAACGAGTT+TGG | - | chr1_4:21673889-21673908 | Msa0156060:CDS | 35.0% | |
| AAACGAGTTTGGCATTATTG+AGG | - | chr1_4:21673900-21673919 | Msa0156060:CDS | 35.0% | |
| AACGAGTTTGGCATTATTGA+GGG | - | chr1_4:21673901-21673920 | Msa0156060:CDS | 35.0% | |
| TAGTTTCGTGTGATATGGTA+TGG | + | chr1_4:21673946-21673965 | None:intergenic | 35.0% | |
| CACAATAGTTTCGTGTGATA+TGG | + | chr1_4:21673951-21673970 | None:intergenic | 35.0% | |
| ! | TGCACAATTGTTTTCAGAAG+AGG | - | chr1_4:21674155-21674174 | Msa0156060:CDS | 35.0% |
| !!! | AAGTGCATGTGTTTTTTGCA+AGG | - | chr1_4:21674181-21674200 | Msa0156060:CDS | 35.0% |
| GCTAGATGAAGAGCTTAATA+AGG | - | chr1_4:21674203-21674222 | Msa0156060:CDS | 35.0% | |
| TCCGATTTAAACTTGGACAA+AGG | + | chr1_4:21674754-21674773 | None:intergenic | 35.0% | |
| TAAGGACTCCGATTTAAACT+TGG | + | chr1_4:21674761-21674780 | None:intergenic | 35.0% | |
| !!! | TAATTTTTTTGGGGTAGCCT+TGG | + | chr1_4:21674820-21674839 | None:intergenic | 35.0% |
| GACACGCTATTTAGAAAAGT+TGG | + | chr1_4:21675179-21675198 | None:intergenic | 35.0% | |
| ! | CTAGCAAATATTTTACGAGG+GGG | + | chr1_4:21675572-21675591 | None:intergenic | 35.0% |
| ! | GCTAGCAAATATTTTACGAG+GGG | + | chr1_4:21675573-21675592 | None:intergenic | 35.0% |
| GCATGCGCACAATAAATATT+TGG | - | chr1_4:21675897-21675916 | Msa0156060:intron | 35.0% | |
| ATACGTCGCACTAAATCAAA+AGG | + | chr1_4:21675954-21675973 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTAGTGCGACGTA+TGG | - | chr1_4:21675953-21675972 | Msa0156060:intron | 35.0% |
| AGTCCTATAAAAGAAGGGTA+TGG | - | chr1_4:21676389-21676408 | Msa0156060:intron | 35.0% | |
| ! | TCTCCATACCCTTCTTTTAT+AGG | + | chr1_4:21676395-21676414 | None:intergenic | 35.0% |
| !!! | ATGACCTGTAAGTTTTGAGA+AGG | + | chr1_4:21676496-21676515 | None:intergenic | 35.0% |
| ! | ATGTTGGATAATTGGTGACT+TGG | - | chr1_4:21676818-21676837 | Msa0156060:intron | 35.0% |
| GATATTAGCTGGGTATTAGT+GGG | - | chr1_4:21676844-21676863 | Msa0156060:intron | 35.0% | |
| AGTGTGAATGAATCCAAATC+AGG | - | chr1_4:21676952-21676971 | Msa0156060:intron | 35.0% | |
| GTGTGAATGAATCCAAATCA+GGG | - | chr1_4:21676953-21676972 | Msa0156060:intron | 35.0% | |
| CCGAAACCACTTCAATATTA+TGG | - | chr1_4:21677200-21677219 | Msa0156060:intron | 35.0% | |
| ! | TTTTACTCCTAACCGAACAT+CGG | + | chr1_4:21677303-21677322 | None:intergenic | 35.0% |
| ! | CTATAAAGTAGTTTGGTGGT+TGG | + | chr1_4:21677728-21677747 | None:intergenic | 35.0% |
| GAGTCTATAAAGTAGTTTGG+TGG | + | chr1_4:21677732-21677751 | None:intergenic | 35.0% | |
| GAGGAGTCTATAAAGTAGTT+TGG | + | chr1_4:21677735-21677754 | None:intergenic | 35.0% | |
| !! | TGAGCTTTTTAGCAATGTGA+TGG | - | chr1_4:21677846-21677865 | Msa0156060:intron | 35.0% |
| AGAATGCTGCATTATGGTAT+GGG | + | chr1_4:21677873-21677892 | None:intergenic | 35.0% | |
| TAGAATGCTGCATTATGGTA+TGG | + | chr1_4:21677874-21677893 | None:intergenic | 35.0% | |
| CTTGTTAGAATGCTGCATTA+TGG | + | chr1_4:21677879-21677898 | None:intergenic | 35.0% | |
| GATCCTCAAAAAGTTTGACA+AGG | - | chr1_4:21678122-21678141 | Msa0156060:intron | 35.0% | |
| TGTATAGTGCACGTGTAATA+AGG | + | chr1_4:21678168-21678187 | None:intergenic | 35.0% | |
| GTGCACTATACATACATACA+GGG | - | chr1_4:21678176-21678195 | Msa0156060:intron | 35.0% | |
| TGCACTATACATACATACAG+GGG | - | chr1_4:21678177-21678196 | Msa0156060:intron | 35.0% | |
| CGAAGCTAAGTAACAACTAT+GGG | - | chr1_4:21678200-21678219 | Msa0156060:intron | 35.0% | |
| GAAGCTAAGTAACAACTATG+GGG | - | chr1_4:21678201-21678220 | Msa0156060:intron | 35.0% | |
| !!! | AGCTAGCAACTTTTTTACGA+GGG | + | chr1_4:21678529-21678548 | None:intergenic | 35.0% |
| !!! | AAGCTAGCAACTTTTTTACG+AGG | + | chr1_4:21678530-21678549 | None:intergenic | 35.0% |
| ! | TCACGTTCTTTTGTGTTTCT+TGG | - | chr1_4:21678617-21678636 | Msa0156060:CDS | 35.0% |
| ! | TTTCTTGGTCAGTTGCATTT+TGG | - | chr1_4:21678632-21678651 | Msa0156060:CDS | 35.0% |
| ! | TTCTTGGTCAGTTGCATTTT+GGG | - | chr1_4:21678633-21678652 | Msa0156060:CDS | 35.0% |
| TATTGGGCAAAGTAAGATGT+AGG | + | chr1_4:21678667-21678686 | None:intergenic | 35.0% | |
| AATGAAACATCTTCACGTGA+GGG | + | chr1_4:21678794-21678813 | None:intergenic | 35.0% | |
| AAATGAAACATCTTCACGTG+AGG | + | chr1_4:21678795-21678814 | None:intergenic | 35.0% | |
| AGGGTTAAAGTGATCTCATT+AGG | + | chr1_4:21678904-21678923 | None:intergenic | 35.0% | |
| ! | AATAACTTGCAGAAGCTGTT+TGG | + | chr1_4:21678948-21678967 | None:intergenic | 35.0% |
| ! | TGTTAGACTAATGGATGAAG+TGG | - | chr1_4:21679191-21679210 | Msa0156060:intron | 35.0% |
| ! | AGCAAAGTGCTTTGTGAATA+TGG | + | chr1_4:21679220-21679239 | None:intergenic | 35.0% |
| TTAAAACCTCAAGTGCAGAA+AGG | - | chr1_4:21679270-21679289 | Msa0156060:intron | 35.0% | |
| GAAGTTATTACCGACAAAGA+AGG | + | chr1_4:21679310-21679329 | None:intergenic | 35.0% | |
| CAACCGAACTCTAAATTATC+AGG | - | chr1_4:21679483-21679502 | Msa0156060:intron | 35.0% | |
| ! | GACCCTGATAATTTAGAGTT+CGG | + | chr1_4:21679489-21679508 | None:intergenic | 35.0% |
| ATCGTCTGATTCTCAAAAGA+AGG | + | chr1_4:21679513-21679532 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr1_4:21679754-21679773 | None:intergenic | 35.0% | |
| TCTCTTCTCTCTCATTTCTT+TGG | - | chr1_4:21679768-21679787 | Msa0156060:intron | 35.0% | |
| AGAGAAAATACCACACAAGT+GGG | + | chr1_4:21679948-21679967 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr1_4:21680318-21680337 | Msa0156060:intron | 35.0% | |
| CATTAACAACTTATCACAGC+TGG | - | chr1_4:21680371-21680390 | Msa0156060:intron | 35.0% | |
| AGTCTACACTTGTTCATGTA+TGG | - | chr1_4:21680626-21680645 | Msa0156060:CDS | 35.0% | |
| TAACCAGAAGAAGAATTCCA+GGG | + | chr1_4:21680844-21680863 | None:intergenic | 35.0% | |
| CAAAATAGTCCATGAAGTGT+CGG | + | chr1_4:21680970-21680989 | None:intergenic | 35.0% | |
| GGCGATAGAATATATCTAAC+GGG | + | chr1_4:21681062-21681081 | None:intergenic | 35.0% | |
| GGGCGATAGAATATATCTAA+CGG | + | chr1_4:21681063-21681082 | None:intergenic | 35.0% | |
| ATTACTACAGGTTCTTCTAG+TGG | - | chr1_4:21681240-21681259 | Msa0156060:intron | 35.0% | |
| ! | AACATAAGATTTTACCTGGC+TGG | + | chr1_4:21681290-21681309 | None:intergenic | 35.0% |
| ! | ACATTAAAAGCATACCTGGA+GGG | + | chr1_4:21681542-21681561 | None:intergenic | 35.0% |
| ! | AACATTAAAAGCATACCTGG+AGG | + | chr1_4:21681543-21681562 | None:intergenic | 35.0% |
| TGTGATAATCACTTCTGTGA+TGG | - | chr1_4:21681768-21681787 | Msa0156060:intron | 35.0% | |
| ! | ATTGGGATTTTGTCAAGGAT+TGG | - | chr1_4:21681809-21681828 | Msa0156060:intron | 35.0% |
| ! | TTGGGATTTTGTCAAGGATT+GGG | - | chr1_4:21681810-21681829 | Msa0156060:intron | 35.0% |
| GAGCATATACTACATGTCTA+TGG | - | chr1_4:21681894-21681913 | Msa0156060:intron | 35.0% | |
| ! | GAATTTGGCTTCGGTTAAAT+TGG | - | chr1_4:21681964-21681983 | Msa0156060:intron | 35.0% |
| !!! | AAGAAGTTACCGCTTTTTTG+TGG | + | chr1_4:21682024-21682043 | None:intergenic | 35.0% |
| !! | TTTTATTTAGGCTAATCGGG+CGG | + | chr1_4:21682218-21682237 | None:intergenic | 35.0% |
| !!! | GGTCAAGTGTCTCTTTTTTT+GGG | - | chr1_4:21682258-21682277 | Msa0156060:intron | 35.0% |
| AAAAATGGACATTGGATTGC+AGG | - | chr1_4:21682310-21682329 | Msa0156060:intron | 35.0% | |
| ! | TCTAACAACCTTGTTTGAAC+AGG | + | chr1_4:21682395-21682414 | None:intergenic | 35.0% |
| ! | ATTTCTGTTAGCTTCATTGG+AGG | - | chr1_4:21682415-21682434 | Msa0156060:intron | 35.0% |
| TCATTGGAGGTTATTAGAAG+AGG | - | chr1_4:21682428-21682447 | Msa0156060:intron | 35.0% | |
| CATTGGAGGTTATTAGAAGA+GGG | - | chr1_4:21682429-21682448 | Msa0156060:intron | 35.0% | |
| !! | TAACTTGTTTGTGAACAGGT+TGG | - | chr1_4:21682575-21682594 | Msa0156060:intron | 35.0% |
| AACGAGCATCTAAACAATGT+TGG | - | chr1_4:21682600-21682619 | Msa0156060:intron | 35.0% | |
| ! | CGCATCTTTTACATCACAAT+TGG | + | chr1_4:21682788-21682807 | None:intergenic | 35.0% |
| TAAAAGATGCGCATTGCAAA+TGG | - | chr1_4:21682797-21682816 | Msa0156060:CDS | 35.0% | |
| GCGGATAGAAGAATGTAAAG+AGG | + | chr1_4:21672031-21672050 | None:intergenic | 40.0% | |
| AGAGAAAGTAGGTGAAGTAG+GGG | + | chr1_4:21672058-21672077 | None:intergenic | 40.0% | |
| GAGAGAAAGTAGGTGAAGTA+GGG | + | chr1_4:21672059-21672078 | None:intergenic | 40.0% | |
| TGAGAGAAAGTAGGTGAAGT+AGG | + | chr1_4:21672060-21672079 | None:intergenic | 40.0% | |
| ! | TTGGGAGCTTGTTCTTCTTT+AGG | + | chr1_4:21672210-21672229 | None:intergenic | 40.0% |
| AAAGAAGAACAAGCTCCCAA+AGG | - | chr1_4:21672210-21672229 | Msa0156060:three_prime_UTR | 40.0% | |
| TCATTCATGGCTTCATTAGC+TGG | - | chr1_4:21672694-21672713 | Msa0156060:intron | 40.0% | |
| TCAACTTGACCGGAAATCAT+GGG | - | chr1_4:21673050-21673069 | Msa0156060:intron | 40.0% | |
| ! | ATGGTGGGACTGAAATCTAA+TGG | - | chr1_4:21673092-21673111 | Msa0156060:intron | 40.0% |
| ATGCGATGGCACAAAATTGA+TGG | - | chr1_4:21673263-21673282 | Msa0156060:CDS | 40.0% | |
| ACGAGTTTGGCATTATTGAG+GGG | - | chr1_4:21673902-21673921 | Msa0156060:CDS | 40.0% | |
| AAGAGAGTGAGTTTCTTGAG+AGG | - | chr1_4:21674247-21674266 | Msa0156060:CDS | 40.0% | |
| AGAGAGTGAGTTTCTTGAGA+GGG | - | chr1_4:21674248-21674267 | Msa0156060:CDS | 40.0% | |
| !!! | TCGGCGGCAGATTATTTTTT+CGG | + | chr1_4:21674338-21674357 | None:intergenic | 40.0% |
| GTCTAAACCTCTAGTAGAAG+AGG | - | chr1_4:21674605-21674624 | Msa0156060:intron | 40.0% | |
| AAATCGGAGTCCTTAAACTC+AGG | - | chr1_4:21674766-21674785 | Msa0156060:intron | 40.0% | |
| AATCGGAGTCCTTAAACTCA+GGG | - | chr1_4:21674767-21674786 | Msa0156060:intron | 40.0% | |
| CATAGCCCTTCATTAGTATG+AGG | - | chr1_4:21674791-21674810 | Msa0156060:intron | 40.0% | |
| GGCTACCTCATACTAATGAA+GGG | + | chr1_4:21674799-21674818 | None:intergenic | 40.0% | |
| TGGCTACCTCATACTAATGA+AGG | + | chr1_4:21674800-21674819 | None:intergenic | 40.0% | |
| TCATTAGTATGAGGTAGCCA+AGG | - | chr1_4:21674800-21674819 | Msa0156060:intron | 40.0% | |
| !! | ATCAAAAGGCACTTGGAGAA+AGG | + | chr1_4:21675940-21675959 | None:intergenic | 40.0% |
| !! | GCACTAAATCAAAAGGCACT+TGG | + | chr1_4:21675947-21675966 | None:intergenic | 40.0% |
| CACACCAACAAAGGCTATAA+CGG | - | chr1_4:21676331-21676350 | Msa0156060:intron | 40.0% | |
| !! | GGCTGTTACTTCCATTTTGT+GGG | - | chr1_4:21676352-21676371 | Msa0156060:intron | 40.0% |
| !! | TGTTACTTCCATTTTGTGGG+AGG | - | chr1_4:21676355-21676374 | Msa0156060:intron | 40.0% |
| ! | TTCCATTTTGTGGGAGGATT+TGG | - | chr1_4:21676361-21676380 | Msa0156060:intron | 40.0% |
| GTTGAACTCTATAAAGGCCT+TGG | - | chr1_4:21676470-21676489 | Msa0156060:intron | 40.0% | |
| !!! | TGTAAGTTTTGAGAAGGCCA+AGG | + | chr1_4:21676490-21676509 | None:intergenic | 40.0% |
| ! | TTGGCCTTCTCAAAACTTAC+AGG | - | chr1_4:21676489-21676508 | Msa0156060:intron | 40.0% |
| CAGTAGAGCACGTAAAATGT+TGG | - | chr1_4:21676802-21676821 | Msa0156060:intron | 40.0% | |
| ! | TTGGATAATTGGTGACTTGG+TGG | - | chr1_4:21676821-21676840 | Msa0156060:intron | 40.0% |
| !! | TGGATAATTGGTGACTTGGT+GGG | - | chr1_4:21676822-21676841 | Msa0156060:intron | 40.0% |
| GGATATTAGCTGGGTATTAG+TGG | - | chr1_4:21676843-21676862 | Msa0156060:intron | 40.0% | |
| GGTCTTGATTATCCGATGTT+CGG | - | chr1_4:21677288-21677307 | Msa0156060:intron | 40.0% | |
| TGATTATCCGATGTTCGGTT+AGG | - | chr1_4:21677293-21677312 | Msa0156060:intron | 40.0% | |
| TGGCAGCTCACTAAATATAG+TGG | - | chr1_4:21678089-21678108 | Msa0156060:intron | 40.0% | |
| CGTGCACTATACATACATAC+AGG | - | chr1_4:21678175-21678194 | Msa0156060:intron | 40.0% | |
| GCGAAGCTAAGTAACAACTA+TGG | - | chr1_4:21678199-21678218 | Msa0156060:intron | 40.0% | |
| TAACAACTATGGGGTAGCAT+TGG | - | chr1_4:21678210-21678229 | Msa0156060:intron | 40.0% | |
| !!! | CTAGCAACTTTTTTACGAGG+GGG | + | chr1_4:21678527-21678546 | None:intergenic | 40.0% |
| !!! | GCTAGCAACTTTTTTACGAG+GGG | + | chr1_4:21678528-21678547 | None:intergenic | 40.0% |
| AACCCTATTGATCAATCAGG+TGG | - | chr1_4:21678918-21678937 | Msa0156060:intron | 40.0% | |
| AGCCACCTGATTGATCAATA+GGG | + | chr1_4:21678923-21678942 | None:intergenic | 40.0% | |
| AAGCCACCTGATTGATCAAT+AGG | + | chr1_4:21678924-21678943 | None:intergenic | 40.0% | |
| AGTGCAGAAAGGTTCTCATA+TGG | - | chr1_4:21679281-21679300 | Msa0156060:intron | 40.0% | |
| CATATGGTCACCTTCTTTGT+CGG | - | chr1_4:21679297-21679316 | Msa0156060:intron | 40.0% | |
| CTGATGTGATTGTCACATAG+TGG | - | chr1_4:21679616-21679635 | Msa0156060:intron | 40.0% | |
| TATTCCGAGAAAGACTTGTG+TGG | - | chr1_4:21679666-21679685 | Msa0156060:intron | 40.0% | |
| TTTGGTTGTGACCACACAAT+GGG | - | chr1_4:21679786-21679805 | Msa0156060:intron | 40.0% | |
| GAAAATACTTGTGTGGACCA+GGG | + | chr1_4:21679819-21679838 | None:intergenic | 40.0% | |
| TTCTCTACAGGGTTATGTAC+AGG | - | chr1_4:21679884-21679903 | Msa0156060:intron | 40.0% | |
| GAGAGAAAATACCACACAAG+TGG | + | chr1_4:21679949-21679968 | None:intergenic | 40.0% | |
| ! | ATATAAGCTGGCTCAGTGTT+AGG | + | chr1_4:21679971-21679990 | None:intergenic | 40.0% |
| TAACACTGAGCCAGCTTATA+TGG | - | chr1_4:21679970-21679989 | Msa0156060:intron | 40.0% | |
| TAGACTGCTTCCATATAAGC+TGG | + | chr1_4:21679983-21680002 | None:intergenic | 40.0% | |
| AGAAGTTGTACCTGAAGACA+GGG | + | chr1_4:21680006-21680025 | None:intergenic | 40.0% | |
| TCTTCAGGTACAACTTCTCA+TGG | - | chr1_4:21680008-21680027 | Msa0156060:intron | 40.0% | |
| ! | TTTAGTTCGCGAGCTGTAAT+CGG | + | chr1_4:21680139-21680158 | None:intergenic | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr1_4:21680261-21680280 | Msa0156060:intron | 40.0% | |
| ATGGATGCAACCTATACATG+TGG | - | chr1_4:21680645-21680664 | Msa0156060:CDS | 40.0% | |
| ATGCAACCTATACATGTGGA+AGG | - | chr1_4:21680649-21680668 | Msa0156060:CDS | 40.0% | |
| TTGTAGCCTTCCACATGTAT+AGG | + | chr1_4:21680658-21680677 | None:intergenic | 40.0% | |
| CTATGCTTTAATGCTGTGCT+TGG | + | chr1_4:21680713-21680732 | None:intergenic | 40.0% | |
| TATTCATGACTGCTGTGGTT+GGG | - | chr1_4:21680756-21680775 | Msa0156060:CDS | 40.0% | |
| TGGTTGTGCATCTTCTTCTT+AGG | - | chr1_4:21680783-21680802 | Msa0156060:CDS | 40.0% | |
| GGTTGTGCATCTTCTTCTTA+GGG | - | chr1_4:21680784-21680803 | Msa0156060:CDS | 40.0% | |
| CTAACCAGAAGAAGAATTCC+AGG | + | chr1_4:21680845-21680864 | None:intergenic | 40.0% | |
| !! | CGACACTTCATGGACTATTT+TGG | - | chr1_4:21680968-21680987 | Msa0156060:intron | 40.0% |
| ! | GATACCATTGCTAAGGCATT+TGG | - | chr1_4:21681393-21681412 | Msa0156060:intron | 40.0% |
| CAGAATGACAAGTTTCAGGA+TGG | + | chr1_4:21681462-21681481 | None:intergenic | 40.0% | |
| CATCCTGAAACTTGTCATTC+TGG | - | chr1_4:21681460-21681479 | Msa0156060:intron | 40.0% | |
| CTTCCAGAATGACAAGTTTC+AGG | + | chr1_4:21681466-21681485 | None:intergenic | 40.0% | |
| TGACTCTGATGTTGCACATT+TGG | - | chr1_4:21681657-21681676 | Msa0156060:intron | 40.0% | |
| TGTTGCACATTTGGCTAACA+TGG | - | chr1_4:21681666-21681685 | Msa0156060:intron | 40.0% | |
| GTTGCACATTTGGCTAACAT+GGG | - | chr1_4:21681667-21681686 | Msa0156060:intron | 40.0% | |
| TTGCACATTTGGCTAACATG+GGG | - | chr1_4:21681668-21681687 | Msa0156060:intron | 40.0% | |
| ! | TGGGATTTTGTCAAGGATTG+GGG | - | chr1_4:21681811-21681830 | Msa0156060:intron | 40.0% |
| ATCCTAACTCCAGAAATGCA+TGG | - | chr1_4:21681842-21681861 | Msa0156060:intron | 40.0% | |
| ATCTCTAAGCCATGCATTTC+TGG | + | chr1_4:21681854-21681873 | None:intergenic | 40.0% | |
| CTAAAATACGTTCAATCGGG+TGG | + | chr1_4:21681990-21682009 | None:intergenic | 40.0% | |
| TGGGTTTAGCCACAAAAAAG+CGG | - | chr1_4:21682012-21682031 | Msa0156060:intron | 40.0% | |
| TTTATTTAGGCTAATCGGGC+GGG | + | chr1_4:21682217-21682236 | None:intergenic | 40.0% | |
| AATATTAGGGTTGTGTCGGA+CGG | - | chr1_4:21682236-21682255 | Msa0156060:intron | 40.0% | |
| !!! | GGGTCAAGTGTCTCTTTTTT+TGG | - | chr1_4:21682257-21682276 | Msa0156060:intron | 40.0% |
| ACTGTCATGCACTTCAAAGT+GGG | - | chr1_4:21682368-21682387 | Msa0156060:intron | 40.0% | |
| ! | AGGTTATTAGAAGAGGGCAT+TGG | - | chr1_4:21682435-21682454 | Msa0156060:intron | 40.0% |
| GATGCAGATTCGGATAATTG+AGG | - | chr1_4:21682663-21682682 | Msa0156060:intron | 40.0% | |
| AGAAAGTAGGTGAAGTAGGG+GGG | + | chr1_4:21672056-21672075 | None:intergenic | 45.0% | |
| GAGAAAGTAGGTGAAGTAGG+GGG | + | chr1_4:21672057-21672076 | None:intergenic | 45.0% | |
| GAGTAGCCAAAGTCTCCTTT+GGG | + | chr1_4:21672228-21672247 | None:intergenic | 45.0% | |
| GAAGCCATGAATGAAAGGGA+GGG | + | chr1_4:21672688-21672707 | None:intergenic | 45.0% | |
| TGAAGCCATGAATGAAAGGG+AGG | + | chr1_4:21672689-21672708 | None:intergenic | 45.0% | |
| ! | CACATTTTGCGCACAACTAC+CGG | + | chr1_4:21672848-21672867 | None:intergenic | 45.0% |
| CTCAACTTGACCGGAAATCA+TGG | - | chr1_4:21673049-21673068 | Msa0156060:intron | 45.0% | |
| TTTGTGCCATCGCATACACT+AGG | + | chr1_4:21673258-21673277 | None:intergenic | 45.0% | |
| ATGTCGTGTTATGCTAGGTG+AGG | - | chr1_4:21674085-21674104 | Msa0156060:intron | 45.0% | |
| CTAGGTGAGGAGGAAAATGA+TGG | - | chr1_4:21674098-21674117 | Msa0156060:intron | 45.0% | |
| GATGGAGGATAGTGAAGAAG+AGG | - | chr1_4:21674116-21674135 | Msa0156060:intron | 45.0% | |
| GAGAGTGAGTTTCTTGAGAG+GGG | - | chr1_4:21674249-21674268 | Msa0156060:CDS | 45.0% | |
| !!! | GCAGATTATTTTTTCGGCGC+CGG | + | chr1_4:21674332-21674351 | None:intergenic | 45.0% |
| ! | ATCTCGGCGTTGGAATTTCT+CGG | + | chr1_4:21674357-21674376 | None:intergenic | 45.0% |
| GGGAGAACGAGAGAAAATCT+CGG | + | chr1_4:21674373-21674392 | None:intergenic | 45.0% | |
| AGTCTAGCCTCTTCTACTAG+AGG | + | chr1_4:21674615-21674634 | None:intergenic | 45.0% | |
| ATCGGAGTCCTTAAACTCAG+GGG | - | chr1_4:21674768-21674787 | Msa0156060:intron | 45.0% | |
| TATAGCCTTTGTTGGTGTGG+TGG | + | chr1_4:21676330-21676349 | None:intergenic | 45.0% | |
| CGTTATAGCCTTTGTTGGTG+TGG | + | chr1_4:21676333-21676352 | None:intergenic | 45.0% | |
| ACAGCCGTTATAGCCTTTGT+TGG | + | chr1_4:21676338-21676357 | None:intergenic | 45.0% | |
| !! | CGGCTGTTACTTCCATTTTG+TGG | - | chr1_4:21676351-21676370 | Msa0156060:intron | 45.0% |
| CACCAAATCCTCCCACAAAA+TGG | + | chr1_4:21676366-21676385 | None:intergenic | 45.0% | |
| !! | TGACTTGGTGGGATATTAGC+TGG | - | chr1_4:21676833-21676852 | Msa0156060:intron | 45.0% |
| !! | GACTTGGTGGGATATTAGCT+GGG | - | chr1_4:21676834-21676853 | Msa0156060:intron | 45.0% |
| GAAGTGGTTTCGGTTAGAAC+AGG | + | chr1_4:21677193-21677212 | None:intergenic | 45.0% | |
| ! | TGTTAATCCTCTGGTTCCCA+GGG | - | chr1_4:21677259-21677278 | Msa0156060:intron | 45.0% |
| ! | AATCAAGACCCCTTTTCCCT+GGG | + | chr1_4:21677278-21677297 | None:intergenic | 45.0% |
| ! | TAATCAAGACCCCTTTTCCC+TGG | + | chr1_4:21677279-21677298 | None:intergenic | 45.0% |
| TTGTCCCTGTGAGCTTAACT+CGG | - | chr1_4:21677602-21677621 | Msa0156060:intron | 45.0% | |
| !! | AACAGTGTCGATGCCTGAAA+AGG | - | chr1_4:21677902-21677921 | Msa0156060:intron | 45.0% |
| TGAGAACCTTTCTGCACTTG+AGG | + | chr1_4:21679279-21679298 | None:intergenic | 45.0% | |
| TGGTCCACACAAGTCTTTCT+CGG | + | chr1_4:21679673-21679692 | None:intergenic | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | + | chr1_4:21679699-21679718 | None:intergenic | 45.0% | |
| CTTTGGTTGTGACCACACAA+TGG | - | chr1_4:21679785-21679804 | Msa0156060:intron | 45.0% | |
| TTGGTTGTGACCACACAATG+GGG | - | chr1_4:21679787-21679806 | Msa0156060:intron | 45.0% | |
| GGAAAATACTTGTGTGGACC+AGG | + | chr1_4:21679820-21679839 | None:intergenic | 45.0% | |
| GAGAAGTTGTACCTGAAGAC+AGG | + | chr1_4:21680007-21680026 | None:intergenic | 45.0% | |
| CACTGTATTCATGACTGCTG+TGG | - | chr1_4:21680751-21680770 | Msa0156060:CDS | 45.0% | |
| GTATTCATGACTGCTGTGGT+TGG | - | chr1_4:21680755-21680774 | Msa0156060:CDS | 45.0% | |
| !!! | TAGGGCTGCAGGATTTTTTC+CGG | - | chr1_4:21680802-21680821 | Msa0156060:CDS | 45.0% |
| CAGAAGAAGAATTCCAGGGA+TGG | + | chr1_4:21680840-21680859 | None:intergenic | 45.0% | |
| CATCCCTGGAATTCTTCTTC+TGG | - | chr1_4:21680838-21680857 | Msa0156060:CDS | 45.0% | |
| GCTCATAATCAGCAGCACAA+AGG | + | chr1_4:21680998-21681017 | None:intergenic | 45.0% | |
| GGATGAAGCAGAAACGAGTT+GGG | + | chr1_4:21681083-21681102 | None:intergenic | 45.0% | |
| GTCTCCAAATGCCTTAGCAA+TGG | + | chr1_4:21681400-21681419 | None:intergenic | 45.0% | |
| ! | CTAAGGCATTTGGAGACAAC+TGG | - | chr1_4:21681403-21681422 | Msa0156060:intron | 45.0% |
| ! | GGGATTTTGTCAAGGATTGG+GGG | - | chr1_4:21681812-21681831 | Msa0156060:intron | 45.0% |
| !! | AGCCATGCATTTCTGGAGTT+AGG | + | chr1_4:21681847-21681866 | None:intergenic | 45.0% |
| GCATTGCCTGATTGTGTAAC+CGG | - | chr1_4:21682107-21682126 | Msa0156060:intron | 45.0% | |
| CATTGCCTGATTGTGTAACC+GGG | - | chr1_4:21682108-21682127 | Msa0156060:intron | 45.0% | |
| ! | TTTTGCCCGGTTACACAATC+AGG | + | chr1_4:21682116-21682135 | None:intergenic | 45.0% |
| TTATTTAGGCTAATCGGGCG+GGG | + | chr1_4:21682216-21682235 | None:intergenic | 45.0% | |
| ATATTAGGGTTGTGTCGGAC+GGG | - | chr1_4:21682237-21682256 | Msa0156060:intron | 45.0% | |
| GACTGTCATGCACTTCAAAG+TGG | - | chr1_4:21682367-21682386 | Msa0156060:intron | 45.0% | |
| CTGTCATGCACTTCAAAGTG+GGG | - | chr1_4:21682369-21682388 | Msa0156060:intron | 45.0% | |
| !! | GAGGGCATTGGAATTTCTAC+AGG | - | chr1_4:21682447-21682466 | Msa0156060:intron | 45.0% |
| TCTGCATCACGAAAGGGTAA+TGG | + | chr1_4:21682651-21682670 | None:intergenic | 45.0% | |
| ACCCTTTCGTGATGCAGATT+CGG | - | chr1_4:21682653-21682672 | Msa0156060:intron | 45.0% | |
| TCCGAATCTGCATCACGAAA+GGG | + | chr1_4:21682657-21682676 | None:intergenic | 45.0% | |
| ATCCGAATCTGCATCACGAA+AGG | + | chr1_4:21682658-21682677 | None:intergenic | 45.0% | |
| !! | AAAATAAATAAATAAGTATA+TGG | - | chr1_4:21672622-21672641 | Msa0156060:CDS | 5.0% |
| !!! | TTTATTTTTTTCTTTAAATT+TGG | - | chr1_4:21675546-21675565 | Msa0156060:intron | 5.0% |
| !! | AAAAAAATACATAAAATTAA+AGG | - | chr1_4:21676667-21676686 | Msa0156060:intron | 5.0% |
| !!! | AATTTTTTTAATCAATTTAA+TGG | + | chr1_4:21677237-21677256 | None:intergenic | 5.0% |
| !! | ATTAAATTGATTAAAAAAAT+TGG | - | chr1_4:21677236-21677255 | Msa0156060:intron | 5.0% |
| !!! | AAAAATAATTTTTTTACATT+AGG | - | chr1_4:21678501-21678520 | Msa0156060:CDS | 5.0% |
| GAAAGTAGGTGAAGTAGGGG+GGG | + | chr1_4:21672055-21672074 | None:intergenic | 50.0% | |
| CAAGCTCCCAAAGGAGACTT+TGG | - | chr1_4:21672219-21672238 | Msa0156060:three_prime_UTR | 50.0% | |
| GGAGTAGCCAAAGTCTCCTT+TGG | + | chr1_4:21672229-21672248 | None:intergenic | 50.0% | |
| ACAGCCCTCCCTTTCATTCA+TGG | - | chr1_4:21672681-21672700 | Msa0156060:intron | 50.0% | |
| CTTGACCGGAAATCATGGGA+TGG | - | chr1_4:21673054-21673073 | Msa0156060:intron | 50.0% | |
| ATGGGATGGTGCGGAAATCA+TGG | - | chr1_4:21673068-21673087 | Msa0156060:intron | 50.0% | |
| TGGGATGGTGCGGAAATCAT+GGG | - | chr1_4:21673069-21673088 | Msa0156060:intron | 50.0% | |
| ATGGTGCGGAAATCATGGGA+TGG | - | chr1_4:21673073-21673092 | Msa0156060:intron | 50.0% | |
| TGCGGAAATCATGGGATGGT+GGG | - | chr1_4:21673077-21673096 | Msa0156060:intron | 50.0% | |
| TCGTGTTATGCTAGGTGAGG+AGG | - | chr1_4:21674088-21674107 | Msa0156060:intron | 50.0% | |
| GGTGAGGAGGAAAATGATGG+AGG | - | chr1_4:21674101-21674120 | Msa0156060:intron | 50.0% | |
| ACGAGAGAAAATCTCGGCGT+TGG | + | chr1_4:21674367-21674386 | None:intergenic | 50.0% | |
| TTCGGTTAGAACAGGTGTGC+TGG | + | chr1_4:21677185-21677204 | None:intergenic | 50.0% | |
| ! | GTGTTAATCCTCTGGTTCCC+AGG | - | chr1_4:21677258-21677277 | Msa0156060:intron | 50.0% |
| CCAACCGAGTTAAGCTCACA+GGG | + | chr1_4:21677609-21677628 | None:intergenic | 50.0% | |
| ACCAACCGAGTTAAGCTCAC+AGG | + | chr1_4:21677610-21677629 | None:intergenic | 50.0% | |
| GTGAGCTTAACTCGGTTGGT+AGG | - | chr1_4:21677610-21677629 | Msa0156060:intron | 50.0% | |
| AGGAGTCATGGTTCGAACTC+TGG | - | chr1_4:21677656-21677675 | Msa0156060:intron | 50.0% | |
| GATGCCTGAAAAGGACCAGT+GGG | - | chr1_4:21677911-21677930 | Msa0156060:intron | 50.0% | |
| AAAAGGACCAGTGGGACTGT+GGG | - | chr1_4:21677919-21677938 | Msa0156060:intron | 50.0% | |
| GAGAAAGACTTGTGTGGACC+AGG | - | chr1_4:21679672-21679691 | Msa0156060:intron | 50.0% | |
| TGGACCAGGACCACACAATT+GGG | - | chr1_4:21679686-21679705 | Msa0156060:intron | 50.0% | |
| CAAACCCAATTGTGTGGTCC+TGG | + | chr1_4:21679693-21679712 | None:intergenic | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | - | chr1_4:21679691-21679710 | Msa0156060:intron | 50.0% | |
| TGTGACCACACAATGGGGTT+TGG | - | chr1_4:21679792-21679811 | Msa0156060:intron | 50.0% | |
| AAGCAGTCTACCCTGTCTTC+AGG | - | chr1_4:21679993-21680012 | Msa0156060:intron | 50.0% | |
| CATCTTCTTCTTAGGGCTGC+AGG | - | chr1_4:21680791-21680810 | Msa0156060:CDS | 50.0% | |
| !!! | AGGGCTGCAGGATTTTTTCC+GGG | - | chr1_4:21680803-21680822 | Msa0156060:CDS | 50.0% |
| ATCACTGGACCGACACTTCA+TGG | - | chr1_4:21680958-21680977 | Msa0156060:intron | 50.0% | |
| CGGATGAAGCAGAAACGAGT+TGG | + | chr1_4:21681084-21681103 | None:intergenic | 50.0% | |
| ! | TGGAGGGCACGCCAAAAATA+TGG | + | chr1_4:21681526-21681545 | None:intergenic | 50.0% |
| !!! | ATATTTTTGGCGTGCCCTCC+AGG | - | chr1_4:21681525-21681544 | Msa0156060:intron | 50.0% |
| ! | GGGGAAGTATGTGTCTGCAA+TGG | - | chr1_4:21681687-21681706 | Msa0156060:intron | 50.0% |
| GCCATATGTTACTCTAGCCC+CGG | + | chr1_4:21681719-21681738 | None:intergenic | 50.0% | |
| GGGCTAGAGTAACATATGGC+AGG | - | chr1_4:21681719-21681738 | Msa0156060:intron | 50.0% | |
| TATTTAGGCTAATCGGGCGG+GGG | + | chr1_4:21682215-21682234 | None:intergenic | 50.0% | |
| AAGTGGGGCCTGTTCAAACA+AGG | - | chr1_4:21682384-21682403 | Msa0156060:intron | 50.0% | |
| CCGCACCATCCCATGATTTC+CGG | + | chr1_4:21673062-21673081 | None:intergenic | 55.0% | |
| CCGGAAATCATGGGATGGTG+CGG | - | chr1_4:21673059-21673078 | Msa0156060:intron | 55.0% | |
| GTGCGGAAATCATGGGATGG+TGG | - | chr1_4:21673076-21673095 | Msa0156060:intron | 55.0% | |
| GAGACGCCTAGTGTATGCGA+TGG | - | chr1_4:21673249-21673268 | Msa0156060:CDS | 55.0% | |
| ! | TCGGCGTTGGAATTTCTCGG+CGG | + | chr1_4:21674354-21674373 | None:intergenic | 55.0% |
| GGGCTATGCCCCTGAGTTTA+AGG | + | chr1_4:21674779-21674798 | None:intergenic | 55.0% | |
| TCCAGCCACCACACCAACAA+AGG | - | chr1_4:21676322-21676341 | Msa0156060:intron | 55.0% | |
| ! | TCCTCTGGTTCCCAGGGAAA+AGG | - | chr1_4:21677265-21677284 | Msa0156060:intron | 55.0% |
| ! | CCTCTGGTTCCCAGGGAAAA+GGG | - | chr1_4:21677266-21677285 | Msa0156060:intron | 55.0% |
| ! | CTCTGGTTCCCAGGGAAAAG+GGG | - | chr1_4:21677267-21677286 | Msa0156060:intron | 55.0% |
| CCCTGTGAGCTTAACTCGGT+TGG | - | chr1_4:21677606-21677625 | Msa0156060:intron | 55.0% | |
| CGATGCCTGAAAAGGACCAG+TGG | - | chr1_4:21677910-21677929 | Msa0156060:intron | 55.0% | |
| ! | CAGTCCCACTGGTCCTTTTC+AGG | + | chr1_4:21677918-21677937 | None:intergenic | 55.0% |
| GAAAAGGACCAGTGGGACTG+TGG | - | chr1_4:21677918-21677937 | Msa0156060:intron | 55.0% | |
| GTGGACCAGGACCACACAAT+TGG | - | chr1_4:21679685-21679704 | Msa0156060:intron | 55.0% | |
| AGGGACCAAACCCCATTGTG+TGG | + | chr1_4:21679800-21679819 | None:intergenic | 55.0% | |
| ! | ACACAATGGGGTTTGGTCCC+TGG | - | chr1_4:21679799-21679818 | Msa0156060:intron | 55.0% |
| GCAATCTTGGCCCACTTGTG+TGG | - | chr1_4:21679935-21679954 | Msa0156060:intron | 55.0% | |
| GACTGCTGTGGTTGGGTCAA+TGG | - | chr1_4:21680763-21680782 | Msa0156060:CDS | 55.0% | |
| GGGATGGCATCAACATTGCC+CGG | + | chr1_4:21680824-21680843 | None:intergenic | 55.0% | |
| GGCAATGTTGATGCCATCCC+TGG | - | chr1_4:21680824-21680843 | Msa0156060:CDS | 55.0% | |
| GGCTGATCAACTTACCAGCC+AGG | - | chr1_4:21681273-21681292 | Msa0156060:intron | 55.0% | |
| GTGTCTGCAATGGTTGCAGC+CGG | - | chr1_4:21681697-21681716 | Msa0156060:intron | 55.0% | |
| TGTCTGCAATGGTTGCAGCC+GGG | - | chr1_4:21681698-21681717 | Msa0156060:intron | 55.0% | |
| GCCGGGGCTAGAGTAACATA+TGG | - | chr1_4:21681715-21681734 | Msa0156060:intron | 55.0% | |
| TAGGTGAAGTAGGGGGGGTG+CGG | + | chr1_4:21672050-21672069 | None:intergenic | 60.0% | |
| GCCTTTGTTGGTGTGGTGGC+TGG | + | chr1_4:21676326-21676345 | None:intergenic | 60.0% | |
| ! | CCCTTTTCCCTGGGAACCAG+AGG | + | chr1_4:21677269-21677288 | None:intergenic | 60.0% |
| GTCTGCAATGGTTGCAGCCG+GGG | - | chr1_4:21681699-21681718 | Msa0156060:intron | 60.0% | |
| TGCTGCTCCCACAGTCCCAC+TGG | + | chr1_4:21677929-21677948 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 21672011 | 21682998 | 21672011 | ID=Msa0156060;Name=Msa0156060 |
| chr1_4 | mRNA | 21672011 | 21682998 | 21672011 | ID=Msa0156060-mRNA-1;Parent=Msa0156060;Name=Msa0156060-mRNA-1;_AED=0.12;_eAED=0.12;_QI=82|1|1|1|1|1|14|315|772 |
| chr1_4 | exon | 21672011 | 21672416 | 21672011 | ID=Msa0156060-mRNA-1:exon:7849;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21672541 | 21672677 | 21672541 | ID=Msa0156060-mRNA-1:exon:7848;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21673094 | 21673372 | 21673094 | ID=Msa0156060-mRNA-1:exon:7847;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21673463 | 21673615 | 21673463 | ID=Msa0156060-mRNA-1:exon:7846;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21673715 | 21673759 | 21673715 | ID=Msa0156060-mRNA-1:exon:7845;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21673869 | 21673973 | 21673869 | ID=Msa0156060-mRNA-1:exon:7844;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21674150 | 21674399 | 21674150 | ID=Msa0156060-mRNA-1:exon:7843;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21674995 | 21675115 | 21674995 | ID=Msa0156060-mRNA-1:exon:7842;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21675691 | 21675820 | 21675691 | ID=Msa0156060-mRNA-1:exon:7841;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21676001 | 21676072 | 21676001 | ID=Msa0156060-mRNA-1:exon:7840;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21676866 | 21676914 | 21676866 | ID=Msa0156060-mRNA-1:exon:7839;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21678499 | 21678841 | 21678499 | ID=Msa0156060-mRNA-1:exon:7838;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21680595 | 21680907 | 21680595 | ID=Msa0156060-mRNA-1:exon:7837;Parent=Msa0156060-mRNA-1 |
| chr1_4 | exon | 21682686 | 21682998 | 21682686 | ID=Msa0156060-mRNA-1:exon:7836;Parent=Msa0156060-mRNA-1 |
| chr1_4 | five_prime_UTR | 21682917 | 21682998 | 21682917 | ID=Msa0156060-mRNA-1:five_prime_utr;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21682686 | 21682916 | 21682686 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21680595 | 21680907 | 21680595 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21678499 | 21678841 | 21678499 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21676866 | 21676914 | 21676866 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21676001 | 21676072 | 21676001 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21675691 | 21675820 | 21675691 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21674995 | 21675115 | 21674995 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21674150 | 21674399 | 21674150 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21673869 | 21673973 | 21673869 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21673715 | 21673759 | 21673715 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21673463 | 21673615 | 21673463 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21673094 | 21673372 | 21673094 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21672541 | 21672677 | 21672541 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | CDS | 21672326 | 21672416 | 21672326 | ID=Msa0156060-mRNA-1:cds;Parent=Msa0156060-mRNA-1 |
| chr1_4 | three_prime_UTR | 21672011 | 21672325 | 21672011 | ID=Msa0156060-mRNA-1:three_prime_utr;Parent=Msa0156060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
