Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156100 | sp|Q8S403|PHO1_ARATH | 65.866 | 791 | 242 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1056 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156100 | A0A072VHJ2 | 99.094 | 773 | 6 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1596 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015580 | Msa0156100 | 0.949767 | 6.529894e-108 | -8.615850e-47 |
| Msa0109740 | Msa0156100 | 0.935547 | 7.139658e-97 | -8.615850e-47 |
| Msa0156060 | Msa0156100 | 0.992414 | 3.784878e-193 | -8.615850e-47 |
| Msa0156100 | Msa0170830 | 0.804711 | 1.894274e-49 | -8.615850e-47 |
| Msa0156100 | Msa0191990 | 0.841512 | 4.541936e-58 | -8.615850e-47 |
| Msa0156100 | Msa0192680 | 0.829706 | 4.429566e-55 | -8.615850e-47 |
| Msa0156100 | Msa0272600 | 0.833791 | 4.354019e-56 | -8.615850e-47 |
| Msa0156100 | Msa0312810 | 0.833383 | 5.505163e-56 | -8.615850e-47 |
| Msa0156100 | Msa0434130 | 0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0156100 | Msa0581570 | 0.850307 | 1.847747e-60 | -8.615850e-47 |
| Msa0156100 | Msa0931750 | 0.856243 | 3.669923e-62 | -8.615850e-47 |
| Msa0156100 | Msa1451520 | 0.830320 | 3.138982e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156100 | MtrunA17_Chr1g0166651 | 99.094 | 773 | 6 | 1 | 1 | 772 | 1 | 773 | 0.0 | 1596 |
| Msa0156100 | MtrunA17_Chr1g0187381 | 77.191 | 776 | 167 | 4 | 1 | 771 | 54 | 824 | 0.0 | 1239 |
| Msa0156100 | MtrunA17_Chr8g0368741 | 46.320 | 788 | 397 | 7 | 1 | 771 | 1 | 779 | 0.0 | 709 |
| Msa0156100 | MtrunA17_Chr5g0417841 | 32.650 | 781 | 482 | 11 | 4 | 771 | 3 | 752 | 3.85e-145 | 444 |
| Msa0156100 | MtrunA17_Chr2g0302531 | 34.601 | 815 | 470 | 21 | 2 | 772 | 1 | 796 | 5.89e-144 | 442 |
| Msa0156100 | MtrunA17_Chr7g0217801 | 33.755 | 791 | 493 | 14 | 2 | 772 | 1 | 780 | 3.11e-139 | 429 |
| Msa0156100 | MtrunA17_Chr7g0217771 | 38.920 | 352 | 205 | 5 | 429 | 772 | 1 | 350 | 7.10e-80 | 260 |
| Msa0156100 | MtrunA17_Chr7g0217821 | 35.694 | 353 | 217 | 5 | 429 | 772 | 1 | 352 | 1.26e-70 | 235 |
| Msa0156100 | MtrunA17_Chr7g0217831 | 32.487 | 394 | 234 | 11 | 2 | 380 | 1 | 377 | 1.62e-46 | 170 |
| Msa0156100 | MtrunA17_Chr7g0246941 | 29.446 | 343 | 207 | 14 | 424 | 747 | 76 | 402 | 7.71e-31 | 126 |
| Msa0156100 | MtrunA17_Chr2g0322931 | 27.419 | 372 | 233 | 13 | 404 | 754 | 91 | 446 | 2.62e-29 | 122 |
| Msa0156100 | MtrunA17_Chr7g0217781 | 32.143 | 196 | 115 | 3 | 188 | 380 | 7 | 187 | 2.95e-24 | 101 |
| Msa0156100 | MtrunA17_Chr7g0217791 | 32.895 | 152 | 93 | 5 | 2 | 145 | 1 | 151 | 2.29e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156100 | AT3G23430.1 | 65.866 | 791 | 242 | 9 | 1 | 772 | 1 | 782 | 0.0 | 1056 |
| Msa0156100 | AT1G68740.1 | 46.683 | 799 | 384 | 11 | 1 | 772 | 1 | 784 | 0.0 | 683 |
| Msa0156100 | AT1G68740.2 | 44.932 | 730 | 360 | 11 | 1 | 703 | 1 | 715 | 0.0 | 584 |
| Msa0156100 | AT3G29060.1 | 32.406 | 827 | 464 | 13 | 2 | 767 | 1 | 793 | 2.30e-146 | 449 |
| Msa0156100 | AT1G35350.1 | 34.483 | 783 | 465 | 15 | 2 | 771 | 1 | 748 | 3.65e-144 | 441 |
| Msa0156100 | AT1G26730.1 | 34.234 | 777 | 461 | 14 | 2 | 765 | 1 | 740 | 5.87e-144 | 441 |
| Msa0156100 | AT1G14040.1 | 31.758 | 825 | 497 | 15 | 2 | 772 | 1 | 813 | 1.07e-142 | 439 |
| Msa0156100 | AT4G25350.1 | 32.991 | 779 | 479 | 10 | 2 | 772 | 1 | 744 | 4.54e-139 | 428 |
| Msa0156100 | AT1G69480.2 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.70e-138 | 426 |
| Msa0156100 | AT1G69480.1 | 33.208 | 801 | 462 | 16 | 2 | 765 | 1 | 765 | 5.70e-138 | 426 |
| Msa0156100 | AT2G03260.1 | 31.656 | 815 | 500 | 10 | 2 | 771 | 1 | 803 | 6.38e-136 | 422 |
| Msa0156100 | AT2G03240.1 | 32.975 | 837 | 477 | 18 | 2 | 771 | 1 | 820 | 5.22e-135 | 420 |
| Msa0156100 | AT1G35350.2 | 39.567 | 508 | 301 | 4 | 268 | 771 | 59 | 564 | 4.20e-127 | 391 |
| Msa0156100 | AT2G03260.2 | 38.846 | 520 | 296 | 6 | 267 | 771 | 78 | 590 | 1.77e-123 | 383 |
| Msa0156100 | AT1G26730.2 | 31.616 | 718 | 441 | 14 | 2 | 706 | 1 | 681 | 1.14e-111 | 355 |
| Msa0156100 | AT2G03250.1 | 30.464 | 732 | 447 | 20 | 2 | 707 | 1 | 696 | 1.66e-97 | 318 |
| Msa0156100 | AT2G03250.2 | 29.630 | 621 | 383 | 16 | 2 | 604 | 1 | 585 | 6.43e-73 | 249 |
| Msa0156100 | AT2G32295.1 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.78e-29 | 123 |
| Msa0156100 | AT2G32295.2 | 28.302 | 371 | 227 | 16 | 424 | 772 | 98 | 451 | 1.78e-29 | 123 |
| Msa0156100 | AT5G35730.1 | 26.822 | 343 | 216 | 13 | 424 | 747 | 102 | 428 | 1.90e-27 | 117 |
Find 147 sgRNAs with CRISPR-Local
Find 591 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTGTGCATCTTCTTCTT+AGG | 0.158333 | 1_4:-21700348 | Msa0156100:CDS |
| CTTCATACCTGAATGATATT+TGG | 0.178770 | 1_4:+21708823 | None:intergenic |
| TCTCTTGTTTCCTATAAAAT+TGG | 0.193619 | 1_4:+21706902 | None:intergenic |
| ATCTCTAAGCCATGCATTTC+TGG | 0.202156 | 1_4:+21699280 | None:intergenic |
| TTGGGAGCTTGTTCTTCTTT+AGG | 0.202238 | 1_4:+21708925 | None:intergenic |
| AGCAAAGTGCTTTGTGAATA+TGG | 0.240631 | 1_4:+21701915 | None:intergenic |
| CTTCCAGAATGACAAGTTTC+AGG | 0.243384 | 1_4:+21699668 | None:intergenic |
| ATGACTTTGTATACAACTTT+TGG | 0.258446 | 1_4:-21698294 | Msa0156100:three_prime_UTR |
| AAACCGAATCGAATCGAAAA+TGG | 0.266596 | 1_4:+21708885 | None:intergenic |
| ACAAATGCATCTTTCCATTC+TGG | 0.268062 | 1_4:+21709000 | None:intergenic |
| TAACACTGAGCCAGCTTATA+TGG | 0.270583 | 1_4:-21701162 | Msa0156100:CDS |
| GAAGATTGTAAATGTCAATT+TGG | 0.284176 | 1_4:-21698198 | Msa0156100:three_prime_UTR |
| ATGAAACTTACCCTATAAAA+TGG | 0.285149 | 1_4:+21700002 | None:intergenic |
| AGAATTTCTGTTAGCTTCAT+TGG | 0.286639 | 1_4:-21698719 | Msa0156100:CDS |
| GATCAAAGCTCAAATTATTC+AGG | 0.296286 | 1_4:-21706739 | Msa0156100:intron |
| TTGGCCTTCTCAAAACTTAC+AGG | 0.301447 | 1_4:-21704643 | Msa0156100:intron |
| CATCCCTGGAATTCTTCTTC+TGG | 0.305890 | 1_4:-21700293 | Msa0156100:intron |
| TACATTGTATCAATTGTATT+GGG | 0.320853 | 1_4:-21699339 | Msa0156100:CDS |
| CACCAAATCCTCCCACAAAA+TGG | 0.322606 | 1_4:+21704769 | None:intergenic |
| TATACAAAGTCATAATTTCT+AGG | 0.335003 | 1_4:+21698304 | None:intergenic |
| TTGTAGCCTTCCACATGTAT+AGG | 0.342705 | 1_4:+21700476 | None:intergenic |
| CTCTCAAACATAGAGAAATA+TGG | 0.343344 | 1_4:-21709058 | Msa0156100:exon |
| GATACCATTGCTAAGGCATT+TGG | 0.344575 | 1_4:-21699738 | Msa0156100:CDS |
| TGACTCTGATGTTGCACATT+TGG | 0.345973 | 1_4:-21699474 | Msa0156100:CDS |
| CATCCTGAAACTTGTCATTC+TGG | 0.357319 | 1_4:-21699671 | Msa0156100:CDS |
| TGTAAAGAGGAATATGTTAT+AGG | 0.363657 | 1_4:+21709117 | None:intergenic |
| CATCTTCTTCTTAGGGCTGC+AGG | 0.364468 | 1_4:-21700340 | Msa0156100:CDS |
| GCTAGATGAAGAGCTTAATA+AGG | 0.366604 | 1_4:-21706929 | Msa0156100:CDS |
| CTACATTGTATCAATTGTAT+TGG | 0.370636 | 1_4:-21699340 | Msa0156100:CDS |
| GCCTTTGTTGGTGTGGTGGC+TGG | 0.373706 | 1_4:+21704809 | None:intergenic |
| GGTTGTGCATCTTCTTCTTA+GGG | 0.381083 | 1_4:-21700347 | Msa0156100:CDS |
| AGTCTACACTTGTTCATGTA+TGG | 0.384683 | 1_4:-21700505 | Msa0156100:CDS |
| CTAACCAGAAGAAGAATTCC+AGG | 0.386872 | 1_4:+21700289 | None:intergenic |
| ATATAAGCTGGCTCAGTGTT+AGG | 0.387839 | 1_4:+21701164 | None:intergenic |
| GACTGCTGTGGTTGGGTCAA+TGG | 0.390307 | 1_4:-21700368 | Msa0156100:CDS |
| CATATGGTCACCTTCTTTGT+CGG | 0.390777 | 1_4:-21701835 | Msa0156100:intron |
| TGAGAGAAAGTAGGTGAAGT+AGG | 0.393294 | 1_4:+21709075 | None:intergenic |
| TAACAAACCAAATATCATTC+AGG | 0.396672 | 1_4:-21708830 | Msa0156100:intron |
| ACCCTTTCGTGATGCAGATT+CGG | 0.399651 | 1_4:-21698478 | Msa0156100:CDS |
| GGAGTAGCCAAAGTCTCCTT+TGG | 0.403059 | 1_4:+21708906 | None:intergenic |
| AGCCATGCATTTCTGGAGTT+AGG | 0.404681 | 1_4:+21699287 | None:intergenic |
| TCTAACAACCTTGTTTGAAC+AGG | 0.405992 | 1_4:+21698739 | None:intergenic |
| ATGAAAGGTTGTTAGACTAA+TGG | 0.409132 | 1_4:-21701950 | Msa0156100:intron |
| GTTGAACTCTATAAAGGCCT+TGG | 0.409693 | 1_4:-21704662 | Msa0156100:CDS |
| CTAAGGCATTTGGAGACAAC+TGG | 0.410888 | 1_4:-21699728 | Msa0156100:CDS |
| AATAACTTGCAGAAGCTGTT+TGG | 0.412963 | 1_4:+21702187 | None:intergenic |
| GGCAATGTTGATGCCATCCC+TGG | 0.418502 | 1_4:-21700307 | Msa0156100:CDS |
| GAGCATATACTACATGTCTA+TGG | 0.419044 | 1_4:-21699237 | Msa0156100:intron |
| TGGCAGCTCACTAAATATAG+TGG | 0.425101 | 1_4:-21703043 | Msa0156100:intron |
| GAGAGAAAGTAGGTGAAGTA+GGG | 0.425778 | 1_4:+21709076 | None:intergenic |
| CAAGCTCCCAAAGGAGACTT+TGG | 0.433450 | 1_4:-21708913 | Msa0156100:CDS |
| AGAAAGTAGGTGAAGTAGGG+GGG | 0.438666 | 1_4:+21709079 | None:intergenic |
| TTCTCTACAGGGTTATGTAC+AGG | 0.442470 | 1_4:-21701248 | Msa0156100:intron |
| GAATAATTTGAGCTTTGATC+GGG | 0.445025 | 1_4:+21706742 | None:intergenic |
| ATCTCGGCGTTGGAATTTCT+CGG | 0.447193 | 1_4:+21706778 | None:intergenic |
| AAGCAGTCTACCCTGTCTTC+AGG | 0.450330 | 1_4:-21701139 | Msa0156100:intron |
| TAAAAGATGCGCATTGCAAA+TGG | 0.466249 | 1_4:-21698334 | Msa0156100:three_prime_UTR |
| ACAGCCGTTATAGCCTTTGT+TGG | 0.466698 | 1_4:+21704797 | None:intergenic |
| AAATTCAGAAACATCACAAA+TGG | 0.467434 | 1_4:-21704939 | Msa0156100:CDS |
| CACACCAACAAAGGCTATAA+CGG | 0.472144 | 1_4:-21704801 | Msa0156100:CDS |
| GTGTCTGCAATGGTTGCAGC+CGG | 0.472477 | 1_4:-21699434 | Msa0156100:CDS |
| GTGAATAGTCCTATAAAAGA+AGG | 0.475341 | 1_4:-21704749 | Msa0156100:CDS |
| GAGGGCATTGGAATTTCTAC+AGG | 0.486316 | 1_4:-21698684 | Msa0156100:intron |
| GGCGATAGAATATATCTAAC+GGG | 0.488082 | 1_4:+21700072 | None:intergenic |
| TGAATAATTTGAGCTTTGAT+CGG | 0.488297 | 1_4:+21706741 | None:intergenic |
| CTATGCTTTAATGCTGTGCT+TGG | 0.496091 | 1_4:+21700421 | None:intergenic |
| TATTCATGACTGCTGTGGTT+GGG | 0.496288 | 1_4:-21700375 | Msa0156100:CDS |
| TCTGCATCACGAAAGGGTAA+TGG | 0.496655 | 1_4:+21698483 | None:intergenic |
| GAGAAGTTGTACCTGAAGAC+AGG | 0.507117 | 1_4:+21701128 | None:intergenic |
| GAGTAGCCAAAGTCTCCTTT+GGG | 0.508035 | 1_4:+21708907 | None:intergenic |
| ACGAGAGAAAATCTCGGCGT+TGG | 0.512373 | 1_4:+21706768 | None:intergenic |
| CTCTATGTTTGAGAGAAAGT+AGG | 0.513312 | 1_4:+21709066 | None:intergenic |
| GTATTCATGACTGCTGTGGT+TGG | 0.517470 | 1_4:-21700376 | Msa0156100:CDS |
| CATTGGAGGTTATTAGAAGA+GGG | 0.518967 | 1_4:-21698702 | Msa0156100:CDS |
| ATTTCTGTTAGCTTCATTGG+AGG | 0.519416 | 1_4:-21698716 | Msa0156100:CDS |
| TGAGAACCTTTCTGCACTTG+AGG | 0.521867 | 1_4:+21701856 | None:intergenic |
| AGTGCAGAAAGGTTCTCATA+TGG | 0.524689 | 1_4:-21701851 | Msa0156100:CDS |
| GAAAGTAGGTGAAGTAGGGG+GGG | 0.526768 | 1_4:+21709080 | None:intergenic |
| TTAAACAACTTCTTACTGAC+CGG | 0.527734 | 1_4:-21706822 | Msa0156100:CDS |
| TGTTGCACATTTGGCTAACA+TGG | 0.528897 | 1_4:-21699465 | Msa0156100:CDS |
| TCATTCTGGAAGATTATACA+TGG | 0.529538 | 1_4:-21699657 | Msa0156100:CDS |
| GAGAAAGTAGGTGAAGTAGG+GGG | 0.530029 | 1_4:+21709078 | None:intergenic |
| TCCGAATCTGCATCACGAAA+GGG | 0.530756 | 1_4:+21698477 | None:intergenic |
| TGTCTGCAATGGTTGCAGCC+GGG | 0.531098 | 1_4:-21699433 | Msa0156100:CDS |
| GATGGAGGATAGTGAAGAAG+AGG | 0.531469 | 1_4:-21707016 | Msa0156100:CDS |
| ATCCGAATCTGCATCACGAA+AGG | 0.533826 | 1_4:+21698476 | None:intergenic |
| AGTCCTATAAAAGAAGGGTA+TGG | 0.535476 | 1_4:-21704743 | Msa0156100:CDS |
| GGGATGGCATCAACATTGCC+CGG | 0.536864 | 1_4:+21700310 | None:intergenic |
| GGCTGATCAACTTACCAGCC+AGG | 0.540561 | 1_4:-21699858 | Msa0156100:intron |
| AGAGAGTGAGTTTCTTGAGA+GGG | 0.543146 | 1_4:-21706884 | Msa0156100:CDS |
| TGTTAGACTAATGGATGAAG+TGG | 0.544462 | 1_4:-21701941 | Msa0156100:CDS |
| CGGATGAAGCAGAAACGAGT+TGG | 0.546512 | 1_4:+21700050 | None:intergenic |
| TTAAAACCTCAAGTGCAGAA+AGG | 0.546793 | 1_4:-21701862 | Msa0156100:CDS |
| GGATGAAGCAGAAACGAGTT+GGG | 0.549629 | 1_4:+21700051 | None:intergenic |
| AGGTTATTAGAAGAGGGCAT+TGG | 0.550858 | 1_4:-21698696 | Msa0156100:CDS |
| GCCGGGGCTAGAGTAACATA+TGG | 0.552597 | 1_4:-21699416 | Msa0156100:CDS |
| CTAGGTGAGGAGGAAAATGA+TGG | 0.553948 | 1_4:-21707034 | Msa0156100:intron |
| TAGACTGCTTCCATATAAGC+TGG | 0.554839 | 1_4:+21701152 | None:intergenic |
| AAGCTCAACTAATACCAGAA+TGG | 0.558338 | 1_4:-21709014 | Msa0156100:CDS |
| AGAGAAAGTAGGTGAAGTAG+GGG | 0.560209 | 1_4:+21709077 | None:intergenic |
| CGTTATAGCCTTTGTTGGTG+TGG | 0.564522 | 1_4:+21704802 | None:intergenic |
| GAAGTTATTACCGACAAAGA+AGG | 0.566027 | 1_4:+21701825 | None:intergenic |
| ATTACTACAGGTTCTTCTAG+TGG | 0.568364 | 1_4:-21699891 | Msa0156100:intron |
| GTCTGCAATGGTTGCAGCCG+GGG | 0.570056 | 1_4:-21699432 | Msa0156100:CDS |
| AAGTGGGGCCTGTTCAAACA+AGG | 0.571452 | 1_4:-21698747 | Msa0156100:CDS |
| TGTGATAATCACTTCTGTGA+TGG | 0.578841 | 1_4:-21699363 | Msa0156100:CDS |
| GAGAGTGAGTTTCTTGAGAG+GGG | 0.579909 | 1_4:-21706883 | Msa0156100:CDS |
| GACTGTCATGCACTTCAAAG+TGG | 0.581782 | 1_4:-21698764 | Msa0156100:CDS |
| TCATTGGAGGTTATTAGAAG+AGG | 0.582043 | 1_4:-21698703 | Msa0156100:CDS |
| AACGAGCATCTAAACAATGT+TGG | 0.586936 | 1_4:-21698531 | Msa0156100:CDS |
| ATCCTAACTCCAGAAATGCA+TGG | 0.587354 | 1_4:-21699289 | Msa0156100:CDS |
| TCCAGCCACCACACCAACAA+AGG | 0.591128 | 1_4:-21704810 | Msa0156100:CDS |
| TATAGCCTTTGTTGGTGTGG+TGG | 0.591860 | 1_4:+21704805 | None:intergenic |
| GTCTCCAAATGCCTTAGCAA+TGG | 0.595254 | 1_4:+21699734 | None:intergenic |
| GGGCTAGAGTAACATATGGC+AGG | 0.598969 | 1_4:-21699412 | Msa0156100:CDS |
| GGGCGATAGAATATATCTAA+CGG | 0.599745 | 1_4:+21700071 | None:intergenic |
| ACTGTCATGCACTTCAAAGT+GGG | 0.599916 | 1_4:-21698763 | Msa0156100:CDS |
| CACTGTATTCATGACTGCTG+TGG | 0.600052 | 1_4:-21700380 | Msa0156100:CDS |
| TGAATAGTCCTATAAAAGAA+GGG | 0.602645 | 1_4:-21704748 | Msa0156100:CDS |
| GCCATATGTTACTCTAGCCC+CGG | 0.604469 | 1_4:+21699415 | None:intergenic |
| ATATACAGATACCATTGCTA+AGG | 0.605910 | 1_4:-21699745 | Msa0156100:intron |
| TCGTGTTATGCTAGGTGAGG+AGG | 0.606435 | 1_4:-21707044 | Msa0156100:intron |
| CAGAATGACAAGTTTCAGGA+TGG | 0.607771 | 1_4:+21699672 | None:intergenic |
| GATGCAGATTCGGATAATTG+AGG | 0.609576 | 1_4:-21698468 | Msa0156100:exon |
| GGTGAGGAGGAAAATGATGG+AGG | 0.614036 | 1_4:-21707031 | Msa0156100:CDS |
| GCGGATAGAAGAATGTAAAG+AGG | 0.619017 | 1_4:+21709104 | None:intergenic |
| GAGAGAAAATACCACACAAG+TGG | 0.620395 | 1_4:+21701186 | None:intergenic |
| AAATATGGTGAAATTCTCAA+AGG | 0.620764 | 1_4:-21709043 | Msa0156100:exon |
| AAGAGAGTGAGTTTCTTGAG+AGG | 0.626823 | 1_4:-21706885 | Msa0156100:CDS |
| GGGAGAACGAGAGAAAATCT+CGG | 0.628260 | 1_4:+21706762 | None:intergenic |
| ATTACTAGTGTATAAGACGA+TGG | 0.628674 | 1_4:-21699502 | Msa0156100:intron |
| GCAATCTTGGCCCACTTGTG+TGG | 0.629460 | 1_4:-21701197 | Msa0156100:CDS |
| ACATTTCATTAGTTCAGACA+AGG | 0.639364 | 1_4:-21702145 | Msa0156100:intron |
| ATGCAACCTATACATGTGGA+AGG | 0.640304 | 1_4:-21700482 | Msa0156100:CDS |
| CAGAAGAAGAATTCCAGGGA+TGG | 0.644693 | 1_4:+21700294 | None:intergenic |
| GTTGCACATTTGGCTAACAT+GGG | 0.650024 | 1_4:-21699464 | Msa0156100:CDS |
| TTGCACATTTGGCTAACATG+GGG | 0.654335 | 1_4:-21699463 | Msa0156100:CDS |
| AGAGAAAATACCACACAAGT+GGG | 0.657293 | 1_4:+21701187 | None:intergenic |
| AAAGAAGAACAAGCTCCCAA+AGG | 0.658529 | 1_4:-21708922 | Msa0156100:CDS |
| CTGTCATGCACTTCAAAGTG+GGG | 0.659135 | 1_4:-21698762 | Msa0156100:CDS |
| AGAAGTTGTACCTGAAGACA+GGG | 0.667478 | 1_4:+21701129 | None:intergenic |
| TAACCAGAAGAAGAATTCCA+GGG | 0.669293 | 1_4:+21700290 | None:intergenic |
| ACATTAAAAGCATACCTGGA+GGG | 0.674727 | 1_4:+21699592 | None:intergenic |
| ATGGATGCAACCTATACATG+TGG | 0.686696 | 1_4:-21700486 | Msa0156100:CDS |
| GGGGAAGTATGTGTCTGCAA+TGG | 0.699297 | 1_4:-21699444 | Msa0156100:CDS |
| AAACTATGTTACGAATAACA+CGG | 0.734521 | 1_4:+21700030 | None:intergenic |
| TCGGCGTTGGAATTTCTCGG+CGG | 0.748932 | 1_4:+21706781 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCATATATGTTTTTTTTA+AGG | - | chr1_4:21698932-21698951 | Msa0156100:intron | 10.0% |
| !!! | TTCTTAATTTTTTTTTGTTA+GGG | + | chr1_4:21700120-21700139 | None:intergenic | 10.0% |
| !!! | TTTCTTAATTTTTTTTTGTT+AGG | + | chr1_4:21700121-21700140 | None:intergenic | 10.0% |
| !!! | TCATGAATAATAATTTTTTT+GGG | + | chr1_4:21700974-21700993 | None:intergenic | 10.0% |
| !!! | TTCATGAATAATAATTTTTT+TGG | + | chr1_4:21700975-21700994 | None:intergenic | 10.0% |
| !!! | TAGCTAAATATTTTTTATTT+GGG | + | chr1_4:21701027-21701046 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTGTTAACATAT+CGG | - | chr1_4:21701403-21701422 | Msa0156100:intron | 10.0% |
| !! | TATCTTTAAATTTAATATGT+TGG | - | chr1_4:21701655-21701674 | Msa0156100:intron | 10.0% |
| !! | AAAACAAATGATTAATTATT+TGG | + | chr1_4:21701958-21701977 | None:intergenic | 10.0% |
| !!! | TCAAATAAATTTTCTTTTTT+TGG | + | chr1_4:21702874-21702893 | None:intergenic | 10.0% |
| !!! | TTATTTCTTTTTAATTAATG+AGG | - | chr1_4:21702904-21702923 | Msa0156100:intron | 10.0% |
| !! | TTTGTATGATAATATATAAT+TGG | - | chr1_4:21703191-21703210 | Msa0156100:intron | 10.0% |
| !! | TTAAAATTGATAAATGTTAA+CGG | - | chr1_4:21703567-21703586 | Msa0156100:intron | 10.0% |
| !! | TATAATTAAAAAACAAACTT+TGG | - | chr1_4:21703660-21703679 | Msa0156100:intron | 10.0% |
| !! | ATAATTAAAAAACAAACTTT+GGG | - | chr1_4:21703661-21703680 | Msa0156100:intron | 10.0% |
| !!! | ATCTAATTTTTTTATAGTTT+AGG | - | chr1_4:21704503-21704522 | Msa0156100:intron | 10.0% |
| !! | TTACCAAAAAAATAAATTAA+AGG | - | chr1_4:21705175-21705194 | Msa0156100:intron | 10.0% |
| !! | AAAAAAATAAATTAAAGGAA+GGG | - | chr1_4:21705180-21705199 | Msa0156100:intron | 10.0% |
| !!! | TATAATATTTTGATTATGAA+AGG | - | chr1_4:21705311-21705330 | Msa0156100:intron | 10.0% |
| !! | TATAATCAGATAATATAATT+TGG | + | chr1_4:21705685-21705704 | None:intergenic | 10.0% |
| !! | TAAAATTATAAAATCAACTA+AGG | + | chr1_4:21706006-21706025 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTGTTGAAAAA+TGG | + | chr1_4:21706219-21706238 | None:intergenic | 10.0% |
| !! | CTGAAAATAAAAAAAATTAA+GGG | + | chr1_4:21706660-21706679 | None:intergenic | 10.0% |
| !!! | TATGAAGTTTATTAGTTTTT+GGG | - | chr1_4:21698469-21698488 | Msa0156100:exon | 15.0% |
| !! | AAACAAAAGAAAAATCATAA+TGG | + | chr1_4:21698551-21698570 | None:intergenic | 15.0% |
| !! | TGAAACTTTATACTATTATT+TGG | + | chr1_4:21698730-21698749 | None:intergenic | 15.0% |
| !!! | TTTTTAATCTATACAAATCA+AGG | + | chr1_4:21699038-21699057 | None:intergenic | 15.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | + | chr1_4:21699144-21699163 | None:intergenic | 15.0% |
| !!! | TTTTATTGAACTATATAGTT+TGG | + | chr1_4:21699477-21699496 | None:intergenic | 15.0% |
| !!! | TTTAACTTTCTTAATCATTT+GGG | + | chr1_4:21699601-21699620 | None:intergenic | 15.0% |
| !!! | ATTTAACTTTCTTAATCATT+TGG | + | chr1_4:21699602-21699621 | None:intergenic | 15.0% |
| !!! | TTATATATTTTATTCACTAG+AGG | + | chr1_4:21699699-21699718 | None:intergenic | 15.0% |
| !!! | TTTTTCTACTTTTCTTTTTT+GGG | - | chr1_4:21699991-21700010 | Msa0156100:intron | 15.0% |
| !! | TTCATAAAAAAATTACAAAG+AGG | + | chr1_4:21700587-21700606 | None:intergenic | 15.0% |
| !! | AGACATATATATTTACATAA+AGG | + | chr1_4:21700733-21700752 | None:intergenic | 15.0% |
| !!! | CATGAATAATAATTTTTTTG+GGG | + | chr1_4:21700973-21700992 | None:intergenic | 15.0% |
| !!! | AGCTAAATATTTTTTATTTG+GGG | + | chr1_4:21701026-21701045 | None:intergenic | 15.0% |
| !!! | GTAGCTAAATATTTTTTATT+TGG | + | chr1_4:21701028-21701047 | None:intergenic | 15.0% |
| !!! | TTCAACAAATAAATTTGTTT+GGG | + | chr1_4:21701051-21701070 | None:intergenic | 15.0% |
| !!! | TTTCAACAAATAAATTTGTT+TGG | + | chr1_4:21701052-21701071 | None:intergenic | 15.0% |
| !!! | TTGTATTAATTTGACAATTT+CGG | - | chr1_4:21701115-21701134 | Msa0156100:intron | 15.0% |
| !!! | CCAATAAATTATAACTTTTT+AGG | + | chr1_4:21701620-21701639 | None:intergenic | 15.0% |
| !! | CCTAAAAAGTTATAATTTAT+TGG | - | chr1_4:21701617-21701636 | Msa0156100:intron | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_4:21701860-21701879 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTCATAAGTGT+TGG | - | chr1_4:21701866-21701885 | Msa0156100:CDS | 15.0% |
| !! | ATGAAAAAAATAAACACTAA+TGG | + | chr1_4:21701860-21701879 | None:intergenic | 15.0% |
| !! | TTAGTAAAACTATACAAAAT+TGG | - | chr1_4:21702011-21702030 | Msa0156100:intron | 15.0% |
| !!! | TTTTCTAATCTAATTTGATA+AGG | - | chr1_4:21703283-21703302 | Msa0156100:intron | 15.0% |
| !!! | ATCGAATAAATTATTTTCAT+CGG | + | chr1_4:21703944-21703963 | None:intergenic | 15.0% |
| !! | AAATGAAACAAAAAAAATTG+GGG | + | chr1_4:21704383-21704402 | None:intergenic | 15.0% |
| !! | CAAATGAAACAAAAAAAATT+GGG | + | chr1_4:21704384-21704403 | None:intergenic | 15.0% |
| !! | TCAAATGAAACAAAAAAAAT+TGG | + | chr1_4:21704385-21704404 | None:intergenic | 15.0% |
| !! | TAGCTAAATATATAATAATG+GGG | + | chr1_4:21704436-21704455 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATAATAAT+GGG | + | chr1_4:21704437-21704456 | None:intergenic | 15.0% |
| !!! | CTTCCTTTAATTTATTTTTT+TGG | + | chr1_4:21705181-21705200 | None:intergenic | 15.0% |
| !! | CAAAAAAATAAATTAAAGGA+AGG | - | chr1_4:21705179-21705198 | Msa0156100:intron | 15.0% |
| !!! | TTTAAAATAACCAAATCTTA+TGG | + | chr1_4:21705232-21705251 | None:intergenic | 15.0% |
| !!! | TAATACTTTTTTATACAAGT+AGG | + | chr1_4:21705560-21705579 | None:intergenic | 15.0% |
| !!! | GAAGAATAATATTTTGATTT+GGG | + | chr1_4:21705587-21705606 | None:intergenic | 15.0% |
| !!! | TGAAGAATAATATTTTGATT+TGG | + | chr1_4:21705588-21705607 | None:intergenic | 15.0% |
| !!! | TATAATTTTATTTTCTCTAC+AGG | - | chr1_4:21706016-21706035 | Msa0156100:intron | 15.0% |
| !!! | ATAATTTTATTTTCTCTACA+GGG | - | chr1_4:21706017-21706036 | Msa0156100:intron | 15.0% |
| !!! | AAAATGTCATATCTTATTTT+TGG | + | chr1_4:21706196-21706215 | None:intergenic | 15.0% |
| !! | GCTGAAAATAAAAAAAATTA+AGG | + | chr1_4:21706661-21706680 | None:intergenic | 15.0% |
| !! | AAACAAAACTAAACTAAAAA+TGG | - | chr1_4:21707016-21707035 | Msa0156100:CDS | 15.0% |
| !!! | GTACTAGTTATTATTTTATA+AGG | - | chr1_4:21707070-21707089 | Msa0156100:intron | 15.0% |
| !! | TGAAAAACTGTAAAAATAAA+CGG | + | chr1_4:21707168-21707187 | None:intergenic | 15.0% |
| !! | TTGAAATTATTGTTAGAATT+TGG | - | chr1_4:21708094-21708113 | Msa0156100:intron | 15.0% |
| !!! | AATATTTTATTTAGGCTAAT+CGG | + | chr1_4:21708367-21708386 | None:intergenic | 15.0% |
| !!! | ATTAGCCTAAATAAAATATT+AGG | - | chr1_4:21708367-21708386 | Msa0156100:intron | 15.0% |
| !! | TTAGCCTAAATAAAATATTA+GGG | - | chr1_4:21708368-21708387 | Msa0156100:intron | 15.0% |
| !! | TCACTTTAATTAATCAAAAA+TGG | - | chr1_4:21708440-21708459 | Msa0156100:intron | 15.0% |
| !! | TTCTTAAAACTGAAAAAAAA+AGG | + | chr1_4:21708653-21708672 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATCATTTCAACA+AGG | + | chr1_4:21709033-21709052 | None:intergenic | 15.0% |
| !!! | GTATGAAGTTTATTAGTTTT+TGG | - | chr1_4:21698468-21698487 | Msa0156100:exon | 20.0% |
| !!! | TTTTTGTTTTTGTTGCAATA+AGG | + | chr1_4:21698617-21698636 | None:intergenic | 20.0% |
| !!! | CTTCAATCTTTTATATGATA+TGG | - | chr1_4:21698695-21698714 | Msa0156100:CDS | 20.0% |
| !! | GTAACATATATTTCTTACAA+AGG | - | chr1_4:21698884-21698903 | Msa0156100:intron | 20.0% |
| !! | CAATTTCTTGATAAAATCTA+AGG | + | chr1_4:21699145-21699164 | None:intergenic | 20.0% |
| !! | AATAGTGTAACATAAGTAAT+AGG | + | chr1_4:21699626-21699645 | None:intergenic | 20.0% |
| !!! | TTTTTCATTGGTAGAAAAAA+AGG | + | chr1_4:21699661-21699680 | None:intergenic | 20.0% |
| !!! | AACTACTTTTTAACAACTTT+TGG | - | chr1_4:21699737-21699756 | Msa0156100:CDS | 20.0% |
| !! | ACTCAAAACATAATTCAAAA+AGG | - | chr1_4:21699899-21699918 | Msa0156100:intron | 20.0% |
| !! | AAAAAGAAAAGTAGAAAAAG+AGG | + | chr1_4:21699990-21700009 | None:intergenic | 20.0% |
| !!! | CTTTTTCTACTTTTCTTTTT+TGG | - | chr1_4:21699990-21700009 | Msa0156100:intron | 20.0% |
| !!! | TGATTGAATTTTATTGTCTA+TGG | + | chr1_4:21700177-21700196 | None:intergenic | 20.0% |
| !!! | AAAATTTTGATTTGCTTCAT+TGG | + | chr1_4:21700785-21700804 | None:intergenic | 20.0% |
| !! | ATTATTATTCATGAATGAGT+CGG | - | chr1_4:21700980-21700999 | Msa0156100:intron | 20.0% |
| !!! | TCAACAAATAAATTTGTTTG+GGG | + | chr1_4:21701050-21701069 | None:intergenic | 20.0% |
| !! | AATAACTTATTTGTTTACGT+TGG | - | chr1_4:21701226-21701245 | Msa0156100:CDS | 20.0% |
| !!! | TTAACATATCGGTTAAATTT+AGG | - | chr1_4:21701414-21701433 | Msa0156100:intron | 20.0% |
| !!! | ATTTTTAAGTTAAGTACCTA+AGG | - | chr1_4:21701471-21701490 | Msa0156100:intron | 20.0% |
| !! | CTAAAATTAAACAAAACCTT+AGG | + | chr1_4:21701490-21701509 | None:intergenic | 20.0% |
| !!! | GCAAATTTTTACCATAAAAA+AGG | + | chr1_4:21701559-21701578 | None:intergenic | 20.0% |
| !!! | AAAACAAATGATTAGTTAGT+TGG | + | chr1_4:21701834-21701853 | None:intergenic | 20.0% |
| !!! | TTTTGCATGTTAATCATATA+TGG | + | chr1_4:21702262-21702281 | None:intergenic | 20.0% |
| !! | GTAATAAGAAAAATCCATAA+CGG | + | chr1_4:21702290-21702309 | None:intergenic | 20.0% |
| !! | ATATCAACTTTAGCAAAAAA+TGG | - | chr1_4:21702368-21702387 | Msa0156100:intron | 20.0% |
| !! | AAAAAAAGGAAAACCTAAAA+TGG | - | chr1_4:21702427-21702446 | Msa0156100:intron | 20.0% |
| !! | GTGATAGAGATAAAAATATA+CGG | + | chr1_4:21702754-21702773 | None:intergenic | 20.0% |
| !!! | TCAAGACATTTCTATTTTTA+GGG | - | chr1_4:21703011-21703030 | Msa0156100:CDS | 20.0% |
| !! | AATATATAATTGGATGACTA+TGG | - | chr1_4:21703201-21703220 | Msa0156100:intron | 20.0% |
| !! | ATATATAATTGGATGACTAT+GGG | - | chr1_4:21703202-21703221 | Msa0156100:intron | 20.0% |
| !! | TTGATAAGGTAGAATAAAAA+TGG | - | chr1_4:21703297-21703316 | Msa0156100:intron | 20.0% |
| !! | TTTATGAGTAGAACAAATAT+TGG | + | chr1_4:21703475-21703494 | None:intergenic | 20.0% |
| !! | TAATTTCCAAAAATAAGAAG+AGG | - | chr1_4:21703687-21703706 | Msa0156100:intron | 20.0% |
| !! | GAATAACACATAATATATGT+AGG | - | chr1_4:21703780-21703799 | Msa0156100:intron | 20.0% |
| !!! | AAAAGTACTTATGGTAATTT+GGG | + | chr1_4:21704173-21704192 | None:intergenic | 20.0% |
| !!! | AAAAAGTACTTATGGTAATT+TGG | + | chr1_4:21704174-21704193 | None:intergenic | 20.0% |
| !!! | CTTATGAAAAAAAGTACTTA+TGG | + | chr1_4:21704182-21704201 | None:intergenic | 20.0% |
| !!! | TAACAACATTCTATTGTTTT+TGG | - | chr1_4:21704213-21704232 | Msa0156100:intron | 20.0% |
| !! | GGTAGCTAAATATATAATAA+TGG | + | chr1_4:21704438-21704457 | None:intergenic | 20.0% |
| !! | ATGACAATTAAACTTATTTG+AGG | + | chr1_4:21704459-21704478 | None:intergenic | 20.0% |
| !! | TTATTCATGCAAACTATATT+GGG | + | chr1_4:21704827-21704846 | None:intergenic | 20.0% |
| !! | TTTATTCATGCAAACTATAT+TGG | + | chr1_4:21704828-21704847 | None:intergenic | 20.0% |
| !! | AAGTTTACTTTACTTTCATT+TGG | + | chr1_4:21704853-21704872 | None:intergenic | 20.0% |
| !! | TCAAAATATTATTCTTCATC+AGG | - | chr1_4:21705590-21705609 | Msa0156100:intron | 20.0% |
| !!! | GGTTTTTAAATAAAAGAGTT+AGG | + | chr1_4:21706561-21706580 | None:intergenic | 20.0% |
| !! | TCAAATTGAAAAGTTATGAT+TGG | - | chr1_4:21706596-21706615 | Msa0156100:intron | 20.0% |
| !!! | TGTTAGTTAGTACATTTTAA+TGG | + | chr1_4:21706712-21706731 | None:intergenic | 20.0% |
| !!! | ATATTATTATTTGAGACGAA+CGG | - | chr1_4:21707048-21707067 | Msa0156100:intron | 20.0% |
| !!! | CATACATTTTTTGAAACAAT+TGG | - | chr1_4:21707294-21707313 | Msa0156100:intron | 20.0% |
| !! | TGATTTAATATCATTACTAC+AGG | - | chr1_4:21707373-21707392 | Msa0156100:intron | 20.0% |
| !!! | ATATAACATAAGATTTTACC+TGG | + | chr1_4:21707439-21707458 | None:intergenic | 20.0% |
| !! | TACATTGTATCAATTGTATT+GGG | - | chr1_4:21707937-21707956 | Msa0156100:intron | 20.0% |
| !!! | ATATTTTATTTAGGCTAATC+GGG | + | chr1_4:21708366-21708385 | None:intergenic | 20.0% |
| !!! | ACAACCCTAATATTTTATTT+AGG | + | chr1_4:21708375-21708394 | None:intergenic | 20.0% |
| !! | AATTAATCAAAAATGGACAT+TGG | - | chr1_4:21708447-21708466 | Msa0156100:intron | 20.0% |
| !! | TATACAAAGTCATAATTTCT+AGG | + | chr1_4:21708975-21708994 | None:intergenic | 20.0% |
| ! | TGTAAAGAGGAATATGTTAT+AGG | + | chr1_4:21698162-21698181 | None:intergenic | 25.0% |
| ! | AAATATGGTGAAATTCTCAA+AGG | - | chr1_4:21698233-21698252 | Msa0156100:three_prime_UTR | 25.0% |
| ! | TAACAAACCAAATATCATTC+AGG | - | chr1_4:21698446-21698465 | Msa0156100:three_prime_UTR | 25.0% |
| ! | TCAAGACAATGAAATGAAAA+TGG | - | chr1_4:21698658-21698677 | Msa0156100:intron | 25.0% |
| !! | AAAAGATTGAAGAAAAGTGT+TGG | + | chr1_4:21698687-21698706 | None:intergenic | 25.0% |
| !! | TATTGGCTAACATTAATTTC+AGG | + | chr1_4:21699169-21699188 | None:intergenic | 25.0% |
| ! | AGAAAAATTCAAGAATGACA+TGG | + | chr1_4:21699273-21699292 | None:intergenic | 25.0% |
| !! | CTGATTGTGTTATTGTAAAT+AGG | + | chr1_4:21699327-21699346 | None:intergenic | 25.0% |
| ! | TTTACAATAACACAATCAGA+TGG | - | chr1_4:21699328-21699347 | Msa0156100:CDS | 25.0% |
| !! | CAAATGATATTTAGAATGTG+AGG | - | chr1_4:21699431-21699450 | Msa0156100:CDS | 25.0% |
| ! | ACTTGAACGATTAATCTTTA+TGG | + | chr1_4:21699520-21699539 | None:intergenic | 25.0% |
| !!! | ATGAATGAGTGTTTTTTCAT+TGG | + | chr1_4:21699673-21699692 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr1_4:21706383-21706402 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr1_4:21706370-21706389 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr1_4:21699834-21699853 | Msa0156100:intron | 25.0% |
| ! | AAACATAATTCAAAAAGGAG+TGG | - | chr1_4:21699904-21699923 | Msa0156100:intron | 25.0% |
| !! | TACCATTAAAGTTAGTTTAG+TGG | - | chr1_4:21699949-21699968 | Msa0156100:intron | 25.0% |
| !!! | AGAAAAAGAGGTTTTAGAAA+AGG | + | chr1_4:21699978-21699997 | None:intergenic | 25.0% |
| !! | ATAAGGTGAACCAATTTTAT+AGG | - | chr1_4:21700364-21700383 | Msa0156100:CDS | 25.0% |
| !! | TCTCTTGTTTCCTATAAAAT+TGG | + | chr1_4:21700377-21700396 | None:intergenic | 25.0% |
| !! | TGAATAATTTGAGCTTTGAT+CGG | + | chr1_4:21700538-21700557 | None:intergenic | 25.0% |
| ! | ATTTCGATAACAACAACTTA+AGG | + | chr1_4:21701514-21701533 | None:intergenic | 25.0% |
| !!! | CTAAAAACACTCCTTTTTTA+TGG | - | chr1_4:21701545-21701564 | Msa0156100:intron | 25.0% |
| ! | GGTAAAACTATACAAATTTG+TGG | - | chr1_4:21701887-21701906 | Msa0156100:CDS | 25.0% |
| ! | ACTATACAAAATTGGATCTT+TGG | - | chr1_4:21702019-21702038 | Msa0156100:intron | 25.0% |
| !! | GTATGGAAATTGTATTTCTA+AGG | - | chr1_4:21702114-21702133 | Msa0156100:intron | 25.0% |
| !! | AAAATTTTGTTCACGTGATA+TGG | - | chr1_4:21702221-21702240 | Msa0156100:intron | 25.0% |
| ! | AAATTCAGAAACATCACAAA+TGG | - | chr1_4:21702337-21702356 | Msa0156100:intron | 25.0% |
| !! | ATTTTGTTAATTCAGCAACA+AGG | - | chr1_4:21702396-21702415 | Msa0156100:intron | 25.0% |
| !! | TTTTGTTAATTCAGCAACAA+GGG | - | chr1_4:21702397-21702416 | Msa0156100:intron | 25.0% |
| ! | TGAATAGTCCTATAAAAGAA+GGG | - | chr1_4:21702528-21702547 | Msa0156100:intron | 25.0% |
| !!! | GTCAAGACATTTCTATTTTT+AGG | - | chr1_4:21703010-21703029 | Msa0156100:intron | 25.0% |
| ! | CATGATTGGATCAATTAAAT+TGG | + | chr1_4:21703058-21703077 | None:intergenic | 25.0% |
| ! | TTTCATCCATAATATTGAAG+TGG | + | chr1_4:21703353-21703372 | None:intergenic | 25.0% |
| !!! | TTTTCTCCTCTTCTTATTTT+TGG | + | chr1_4:21703696-21703715 | None:intergenic | 25.0% |
| ! | ATTGAGGTGTATAAGTAAAA+AGG | - | chr1_4:21703720-21703739 | Msa0156100:intron | 25.0% |
| ! | GAAATAAATGTGAAAAAGTG+AGG | + | chr1_4:21703829-21703848 | None:intergenic | 25.0% |
| ! | TTTAGATATTGAACAATCTG+AGG | + | chr1_4:21703898-21703917 | None:intergenic | 25.0% |
| ! | AAGGAATTACAAATACGTAA+AGG | + | chr1_4:21704148-21704167 | None:intergenic | 25.0% |
| !! | TTTTAGTGTACCATAAGATT+TGG | - | chr1_4:21705219-21705238 | Msa0156100:intron | 25.0% |
| !!! | TTATGTGGTTTTGCAATAAT+TGG | - | chr1_4:21705275-21705294 | Msa0156100:intron | 25.0% |
| ! | TAGACATAGATTTGATATAG+TGG | + | chr1_4:21705476-21705495 | None:intergenic | 25.0% |
| ! | CTATGTCTATATTAGTGAAT+TGG | - | chr1_4:21705487-21705506 | Msa0156100:intron | 25.0% |
| ! | ATAATAGGAAAATACTTGTG+TGG | + | chr1_4:21705970-21705989 | None:intergenic | 25.0% |
| ! | GGTTTAATGTATGGAATAAT+AGG | + | chr1_4:21705985-21706004 | None:intergenic | 25.0% |
| ! | ATCAACTAAGGTTTAATGTA+TGG | + | chr1_4:21705994-21706013 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr1_4:21699834-21699853 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr1_4:21706370-21706389 | Msa0156100:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr1_4:21706383-21706402 | Msa0156100:intron | 25.0% |
| !! | ATTTGAAACATCATGTTTGA+CGG | + | chr1_4:21706582-21706601 | None:intergenic | 25.0% |
| ! | AAACTATGTTACGAATAACA+CGG | + | chr1_4:21707249-21707268 | None:intergenic | 25.0% |
| ! | ATGAAACTTACCCTATAAAA+TGG | + | chr1_4:21707277-21707296 | None:intergenic | 25.0% |
| !!! | TCTCATTTTTGCCATATTTT+TGG | - | chr1_4:21707657-21707676 | Msa0156100:intron | 25.0% |
| ! | CTACATTGTATCAATTGTAT+TGG | - | chr1_4:21707936-21707955 | Msa0156100:intron | 25.0% |
| !!! | AGTATATGCTCTTATTTTTC+AGG | + | chr1_4:21708030-21708049 | None:intergenic | 25.0% |
| ! | TCAATACTTAGATTAGAAAG+AGG | + | chr1_4:21708078-21708097 | None:intergenic | 25.0% |
| !! | TTATTGTTAGAATTTGGCTT+CGG | - | chr1_4:21708100-21708119 | Msa0156100:intron | 25.0% |
| !!! | CAAATGTTTTGACAAATGTT+GGG | + | chr1_4:21708198-21708217 | None:intergenic | 25.0% |
| !!! | TCAAATGTTTTGACAAATGT+TGG | + | chr1_4:21708199-21708218 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGCGTGATTTTTT+AGG | + | chr1_4:21708323-21708342 | None:intergenic | 25.0% |
| !! | CAAAAACAACTGTATCTTTT+TGG | - | chr1_4:21708334-21708353 | Msa0156100:intron | 25.0% |
| ! | ATAAAATATTAGGGTTGTGT+CGG | - | chr1_4:21708377-21708396 | Msa0156100:intron | 25.0% |
| !!! | TTTTTTCTCAACATGTCTAT+AGG | + | chr1_4:21708861-21708880 | None:intergenic | 25.0% |
| !! | ATGACTTTGTATACAACTTT+TGG | - | chr1_4:21708982-21709001 | Msa0156100:CDS | 25.0% |
| ! | GAAGATTGTAAATGTCAATT+TGG | - | chr1_4:21709078-21709097 | Msa0156100:five_prime_UTR | 25.0% |
| CTCTCAAACATAGAGAAATA+TGG | - | chr1_4:21698218-21698237 | Msa0156100:three_prime_UTR | 30.0% | |
| CTTCATACCTGAATGATATT+TGG | + | chr1_4:21698456-21698475 | None:intergenic | 30.0% | |
| ! | TTGTTGTTCTGTAACATGTT+AGG | - | chr1_4:21698502-21698521 | Msa0156100:CDS | 30.0% |
| TGTTGTTCTGTAACATGTTA+GGG | - | chr1_4:21698503-21698522 | Msa0156100:CDS | 30.0% | |
| TAATGAAGCCATGAATGAAA+GGG | + | chr1_4:21698836-21698855 | None:intergenic | 30.0% | |
| TGTTAGCAACAATATACATC+CGG | - | chr1_4:21698970-21698989 | Msa0156100:intron | 30.0% | |
| AGAAAGATTCAAGAATGACA+TGG | - | chr1_4:21699107-21699126 | Msa0156100:intron | 30.0% | |
| CAATAAAATCTCAACTTGAC+CGG | - | chr1_4:21699184-21699203 | Msa0156100:intron | 30.0% | |
| ATCAGATGGTACAAAATTCA+CGG | - | chr1_4:21699342-21699361 | Msa0156100:CDS | 30.0% | |
| ! | GAAATGACATTTAGAATGTG+AGG | - | chr1_4:21699366-21699385 | Msa0156100:CDS | 30.0% |
| TTTCTTAATCATTTGGGTCA+AGG | + | chr1_4:21699595-21699614 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr1_4:21706396-21706415 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr1_4:21699860-21699879 | Msa0156100:CDS | 30.0% | |
| !!! | AAAAGAGGTTTTAGAAAAGG+AGG | + | chr1_4:21699975-21699994 | None:intergenic | 30.0% |
| TAATTATGTCGTGTTATGCT+AGG | - | chr1_4:21700224-21700243 | Msa0156100:intron | 30.0% | |
| TTAAACAACTTCTTACTGAC+CGG | - | chr1_4:21700454-21700473 | Msa0156100:CDS | 30.0% | |
| ! | GAATAATTTGAGCTTTGATC+GGG | + | chr1_4:21700537-21700556 | None:intergenic | 30.0% |
| GATCAAAGCTCAAATTATTC+AGG | - | chr1_4:21700537-21700556 | Msa0156100:intron | 30.0% | |
| !!! | ATTTTGATTTGCTTCATTGG+AGG | + | chr1_4:21700782-21700801 | None:intergenic | 30.0% |
| ACGCAGTTAGACATTAAATA+TGG | + | chr1_4:21700828-21700847 | None:intergenic | 30.0% | |
| TCCTTTGTCCAAGTTTAAAT+CGG | - | chr1_4:21700894-21700913 | Msa0156100:intron | 30.0% | |
| ACACGCTATTTAGAAAAGTT+GGG | + | chr1_4:21701322-21701341 | None:intergenic | 30.0% | |
| ! | AGCTAGCAAATATTTTACGA+GGG | + | chr1_4:21701718-21701737 | None:intergenic | 30.0% |
| ! | AAGCTAGCAAATATTTTACG+AGG | + | chr1_4:21701719-21701738 | None:intergenic | 30.0% |
| TGTTAAATGAGTTTAAGCAG+CGG | + | chr1_4:21701744-21701763 | None:intergenic | 30.0% | |
| ATGTATGTATGTGTGTGTAA+AGG | - | chr1_4:21701923-21701942 | Msa0156100:CDS | 30.0% | |
| CATGCGCACAATAAATATTT+GGG | - | chr1_4:21702042-21702061 | Msa0156100:intron | 30.0% | |
| ATGCGCACAATAAATATTTG+GGG | - | chr1_4:21702043-21702062 | Msa0156100:intron | 30.0% | |
| CATGCAAAATAAAACCGTTA+TGG | - | chr1_4:21702273-21702292 | Msa0156100:intron | 30.0% | |
| ACAAGGGTAAAGACAAAAAA+AGG | - | chr1_4:21702413-21702432 | Msa0156100:intron | 30.0% | |
| !!! | TCAATTCTCATTGCCATTTT+AGG | + | chr1_4:21702443-21702462 | None:intergenic | 30.0% |
| GTGAATAGTCCTATAAAAGA+AGG | - | chr1_4:21702527-21702546 | Msa0156100:intron | 30.0% | |
| ! | GCTTTTGTTGAACTCTATAA+AGG | - | chr1_4:21702608-21702627 | Msa0156100:intron | 30.0% |
| TTAATGAGGCTAATCATATG+TGG | - | chr1_4:21702918-21702937 | Msa0156100:intron | 30.0% | |
| CACGTAAAATGTTGGATAAT+TGG | - | chr1_4:21702954-21702973 | Msa0156100:intron | 30.0% | |
| ! | TTTTGTGACATACTCATGAT+TGG | + | chr1_4:21703072-21703091 | None:intergenic | 30.0% |
| AAATGAGAAATACCCTGATT+TGG | + | chr1_4:21703112-21703131 | None:intergenic | 30.0% | |
| ! | AAATCAGGGTATTTCTCATT+TGG | - | chr1_4:21703111-21703130 | Msa0156100:intron | 30.0% |
| CCATAATATTGAAGTGGTTT+CGG | + | chr1_4:21703347-21703366 | None:intergenic | 30.0% | |
| !! | AAAAATTGGTGTTAATCCTC+TGG | - | chr1_4:21703394-21703413 | Msa0156100:intron | 30.0% |
| CTTAACAATTTGTCAGTTGT+TGG | - | chr1_4:21703511-21703530 | Msa0156100:intron | 30.0% | |
| ACCATTTCAACACAATTGTT+TGG | - | chr1_4:21703543-21703562 | Msa0156100:intron | 30.0% | |
| ACCAAACAATTGTGTTGAAA+TGG | + | chr1_4:21703547-21703566 | None:intergenic | 30.0% | |
| AAGAGGAGAAAATAGTATTG+AGG | - | chr1_4:21703704-21703723 | Msa0156100:intron | 30.0% | |
| CATAATATATGTAGGAGTCA+TGG | - | chr1_4:21703788-21703807 | Msa0156100:intron | 30.0% | |
| ACTTATGGTAATTTGGGTAA+AGG | + | chr1_4:21704167-21704186 | None:intergenic | 30.0% | |
| ! | ATACCTTGTCAAACTTTTTG+AGG | + | chr1_4:21704272-21704291 | None:intergenic | 30.0% |
| TCAAAAAGTTTGACAAGGTA+TGG | - | chr1_4:21704271-21704290 | Msa0156100:intron | 30.0% | |
| ! | TATAATAATGGGGTAGCTAA+AGG | + | chr1_4:21704426-21704445 | None:intergenic | 30.0% |
| CTCTCTTTATAGTTGCTAAA+AGG | + | chr1_4:21704530-21704549 | None:intergenic | 30.0% | |
| ATTTGTACATATGTATGCAG+CGG | + | chr1_4:21704699-21704718 | None:intergenic | 30.0% | |
| TTTAACCCTATTGATCAATC+AGG | - | chr1_4:21705059-21705078 | Msa0156100:intron | 30.0% | |
| ACATTTCATTAGTTCAGACA+AGG | - | chr1_4:21705131-21705150 | Msa0156100:intron | 30.0% | |
| ! | GAGAGTGTATAATGATTATG+TGG | - | chr1_4:21705260-21705279 | Msa0156100:intron | 30.0% |
| ATGAAAGGTTGTTAGACTAA+TGG | - | chr1_4:21705326-21705345 | Msa0156100:intron | 30.0% | |
| TGCTAGCAATGATAGAAAAA+AGG | - | chr1_4:21705380-21705399 | Msa0156100:intron | 30.0% | |
| ! | TAATTTAGAGTTCGGTTGTT+AGG | + | chr1_4:21705625-21705644 | None:intergenic | 30.0% |
| AACCGAACTCTAAATTATCA+GGG | - | chr1_4:21705628-21705647 | Msa0156100:intron | 30.0% | |
| ACTATGTTTATCACACTTAG+TGG | + | chr1_4:21705786-21705805 | None:intergenic | 30.0% | |
| ! | GTTTTGTGTATATGCAATCT+TGG | - | chr1_4:21706066-21706085 | Msa0156100:intron | 30.0% |
| ! | TTTTGGTCATATGAAGAACT+AGG | + | chr1_4:21706179-21706198 | None:intergenic | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr1_4:21706396-21706415 | Msa0156100:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr1_4:21706468-21706487 | None:intergenic | 30.0% |
| ! | TAAGGTCAAACTTTTATCAC+TGG | - | chr1_4:21707088-21707107 | Msa0156100:intron | 30.0% |
| !!! | TAGTTTGCTCTCCATTTTAT+AGG | - | chr1_4:21707263-21707282 | Msa0156100:intron | 30.0% |
| !! | AGTTTGCTCTCCATTTTATA+GGG | - | chr1_4:21707264-21707283 | Msa0156100:intron | 30.0% |
| !!! | TCTTCTAGTGGACTTTTTTA+TGG | - | chr1_4:21707397-21707416 | Msa0156100:intron | 30.0% |
| ATATACAGATACCATTGCTA+AGG | - | chr1_4:21707531-21707550 | Msa0156100:intron | 30.0% | |
| ! | TCATTCTGGAAGATTATACA+TGG | - | chr1_4:21707619-21707638 | Msa0156100:intron | 30.0% |
| ! | TTCAACATTAAAAGCATACC+TGG | + | chr1_4:21707691-21707710 | None:intergenic | 30.0% |
| ATTACTAGTGTATAAGACGA+TGG | - | chr1_4:21707774-21707793 | Msa0156100:intron | 30.0% | |
| ! | ATTGTATTGGGATTTTGTCA+AGG | - | chr1_4:21707949-21707968 | Msa0156100:intron | 30.0% |
| !! | GTCAAAACATTTGATTTGTC+TGG | - | chr1_4:21708205-21708224 | Msa0156100:intron | 30.0% |
| !! | CTAAAACATTTGATTTTGCC+CGG | + | chr1_4:21708274-21708293 | None:intergenic | 30.0% |
| !!! | TGTTTTAGAAAATGTGCAGA+TGG | - | chr1_4:21708286-21708305 | Msa0156100:intron | 30.0% |
| !!! | GTTTTAGAAAATGTGCAGAT+GGG | - | chr1_4:21708287-21708306 | Msa0156100:intron | 30.0% |
| !!! | ATGTTGTTTTAAGAGTGACT+TGG | - | chr1_4:21708484-21708503 | Msa0156100:intron | 30.0% |
| ! | AGAATTTCTGTTAGCTTCAT+TGG | - | chr1_4:21708557-21708576 | Msa0156100:intron | 30.0% |
| ! | TTAGCTGTTCTAAGTTGTTT+AGG | + | chr1_4:21708624-21708643 | None:intergenic | 30.0% |
| !! | AACTTAACTTGTTTGTGAAC+AGG | - | chr1_4:21708716-21708735 | Msa0156100:intron | 30.0% |
| ! | TTGTATACAACTTTTGGTCT+TGG | - | chr1_4:21708988-21709007 | Msa0156100:CDS | 30.0% |
| CTCTATGTTTGAGAGAAAGT+AGG | + | chr1_4:21698213-21698232 | None:intergenic | 35.0% | |
| AAGCTCAACTAATACCAGAA+TGG | - | chr1_4:21698262-21698281 | Msa0156100:three_prime_UTR | 35.0% | |
| ACAAATGCATCTTTCCATTC+TGG | + | chr1_4:21698279-21698298 | None:intergenic | 35.0% | |
| !! | ACTCCATTTTCGATTCGATT+CGG | - | chr1_4:21698388-21698407 | Msa0156100:three_prime_UTR | 35.0% |
| AAACCGAATCGAATCGAAAA+TGG | + | chr1_4:21698394-21698413 | None:intergenic | 35.0% | |
| CTAATGAAGCCATGAATGAA+AGG | + | chr1_4:21698837-21698856 | None:intergenic | 35.0% | |
| !!! | CGGTCAAGTTGAGATTTTAT+TGG | + | chr1_4:21699186-21699205 | None:intergenic | 35.0% |
| GGCCACTAAACTAACTTTAA+TGG | + | chr1_4:21699954-21699973 | None:intergenic | 35.0% | |
| AAAGCTAGTGAAAACGAGTT+TGG | - | chr1_4:21700033-21700052 | Msa0156100:CDS | 35.0% | |
| AAACGAGTTTGGCATTATTG+AGG | - | chr1_4:21700044-21700063 | Msa0156100:CDS | 35.0% | |
| AACGAGTTTGGCATTATTGA+GGG | - | chr1_4:21700045-21700064 | Msa0156100:CDS | 35.0% | |
| TAGTTTCGTGTGATATGGTA+TGG | + | chr1_4:21700090-21700109 | None:intergenic | 35.0% | |
| CACAATAGTTTCGTGTGATA+TGG | + | chr1_4:21700095-21700114 | None:intergenic | 35.0% | |
| ! | TGCACAATTGTTTTCAGAAG+AGG | - | chr1_4:21700299-21700318 | Msa0156100:CDS | 35.0% |
| !!! | AAGTGCATGTGTTTTTTGCA+AGG | - | chr1_4:21700325-21700344 | Msa0156100:CDS | 35.0% |
| GCTAGATGAAGAGCTTAATA+AGG | - | chr1_4:21700347-21700366 | Msa0156100:CDS | 35.0% | |
| TCCGATTTAAACTTGGACAA+AGG | + | chr1_4:21700898-21700917 | None:intergenic | 35.0% | |
| TAAGGACTCCGATTTAAACT+TGG | + | chr1_4:21700905-21700924 | None:intergenic | 35.0% | |
| !!! | TAATTTTTTTGGGGTAGCCT+TGG | + | chr1_4:21700964-21700983 | None:intergenic | 35.0% |
| GACACGCTATTTAGAAAAGT+TGG | + | chr1_4:21701323-21701342 | None:intergenic | 35.0% | |
| ! | CTAGCAAATATTTTACGAGG+GGG | + | chr1_4:21701716-21701735 | None:intergenic | 35.0% |
| ! | GCTAGCAAATATTTTACGAG+GGG | + | chr1_4:21701717-21701736 | None:intergenic | 35.0% |
| GCATGCGCACAATAAATATT+TGG | - | chr1_4:21702041-21702060 | Msa0156100:intron | 35.0% | |
| ATACGTCGCACTAAATCAAA+AGG | + | chr1_4:21702098-21702117 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTAGTGCGACGTA+TGG | - | chr1_4:21702097-21702116 | Msa0156100:intron | 35.0% |
| AGTCCTATAAAAGAAGGGTA+TGG | - | chr1_4:21702533-21702552 | Msa0156100:intron | 35.0% | |
| ! | TCTCCATACCCTTCTTTTAT+AGG | + | chr1_4:21702539-21702558 | None:intergenic | 35.0% |
| !!! | ATGACCTGTAAGTTTTGAGA+AGG | + | chr1_4:21702640-21702659 | None:intergenic | 35.0% |
| ! | ATGTTGGATAATTGGTGACT+TGG | - | chr1_4:21702962-21702981 | Msa0156100:intron | 35.0% |
| GATATTAGCTGGGTATTAGT+GGG | - | chr1_4:21702988-21703007 | Msa0156100:intron | 35.0% | |
| AGTGTGAATGAATCCAAATC+AGG | - | chr1_4:21703096-21703115 | Msa0156100:intron | 35.0% | |
| GTGTGAATGAATCCAAATCA+GGG | - | chr1_4:21703097-21703116 | Msa0156100:intron | 35.0% | |
| CCGAAACCACTTCAATATTA+TGG | - | chr1_4:21703344-21703363 | Msa0156100:intron | 35.0% | |
| ! | TTTTACTCCTAACCGAACAT+CGG | + | chr1_4:21703447-21703466 | None:intergenic | 35.0% |
| ! | CTATAAAGTAGTTTGGTGGT+TGG | + | chr1_4:21703872-21703891 | None:intergenic | 35.0% |
| GAGTCTATAAAGTAGTTTGG+TGG | + | chr1_4:21703876-21703895 | None:intergenic | 35.0% | |
| GAGGAGTCTATAAAGTAGTT+TGG | + | chr1_4:21703879-21703898 | None:intergenic | 35.0% | |
| !! | TGAGCTTTTTAGCAATGTGA+TGG | - | chr1_4:21703990-21704009 | Msa0156100:intron | 35.0% |
| AGAATGCTGCATTATGGTAT+GGG | + | chr1_4:21704017-21704036 | None:intergenic | 35.0% | |
| TAGAATGCTGCATTATGGTA+TGG | + | chr1_4:21704018-21704037 | None:intergenic | 35.0% | |
| CTTGTTAGAATGCTGCATTA+TGG | + | chr1_4:21704023-21704042 | None:intergenic | 35.0% | |
| GATCCTCAAAAAGTTTGACA+AGG | - | chr1_4:21704266-21704285 | Msa0156100:intron | 35.0% | |
| TGTATAGTGCACGTGTAATA+AGG | + | chr1_4:21704312-21704331 | None:intergenic | 35.0% | |
| GTGCACTATACATACATACA+GGG | - | chr1_4:21704320-21704339 | Msa0156100:intron | 35.0% | |
| TGCACTATACATACATACAG+GGG | - | chr1_4:21704321-21704340 | Msa0156100:intron | 35.0% | |
| CGAAGCTAAGTAACAACTAT+GGG | - | chr1_4:21704344-21704363 | Msa0156100:intron | 35.0% | |
| GAAGCTAAGTAACAACTATG+GGG | - | chr1_4:21704345-21704364 | Msa0156100:intron | 35.0% | |
| !!! | AGCTAGCAACTTTTTTACGA+GGG | + | chr1_4:21704673-21704692 | None:intergenic | 35.0% |
| !!! | AAGCTAGCAACTTTTTTACG+AGG | + | chr1_4:21704674-21704693 | None:intergenic | 35.0% |
| ! | TCACGTTCTTTTGTGTTTCT+TGG | - | chr1_4:21704761-21704780 | Msa0156100:CDS | 35.0% |
| ! | TTTCTTGGTCAGTTGCATTT+TGG | - | chr1_4:21704776-21704795 | Msa0156100:CDS | 35.0% |
| ! | TTCTTGGTCAGTTGCATTTT+GGG | - | chr1_4:21704777-21704796 | Msa0156100:CDS | 35.0% |
| TATTGGGCAAAGTAAGATGT+AGG | + | chr1_4:21704811-21704830 | None:intergenic | 35.0% | |
| AATGAAACATCTTCACGTGA+GGG | + | chr1_4:21704938-21704957 | None:intergenic | 35.0% | |
| AAATGAAACATCTTCACGTG+AGG | + | chr1_4:21704939-21704958 | None:intergenic | 35.0% | |
| AGGGTTAAAGTGATCTCATT+AGG | + | chr1_4:21705048-21705067 | None:intergenic | 35.0% | |
| ! | AATAACTTGCAGAAGCTGTT+TGG | + | chr1_4:21705092-21705111 | None:intergenic | 35.0% |
| ! | TGTTAGACTAATGGATGAAG+TGG | - | chr1_4:21705335-21705354 | Msa0156100:intron | 35.0% |
| ! | AGCAAAGTGCTTTGTGAATA+TGG | + | chr1_4:21705364-21705383 | None:intergenic | 35.0% |
| TTAAAACCTCAAGTGCAGAA+AGG | - | chr1_4:21705414-21705433 | Msa0156100:intron | 35.0% | |
| GAAGTTATTACCGACAAAGA+AGG | + | chr1_4:21705454-21705473 | None:intergenic | 35.0% | |
| CAACCGAACTCTAAATTATC+AGG | - | chr1_4:21705627-21705646 | Msa0156100:intron | 35.0% | |
| ! | GACCCTGATAATTTAGAGTT+CGG | + | chr1_4:21705633-21705652 | None:intergenic | 35.0% |
| ATCGTCTGATTCTCAAAAGA+AGG | + | chr1_4:21705657-21705676 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr1_4:21705898-21705917 | None:intergenic | 35.0% | |
| TCTCTTCTCTCTCATTTCTT+TGG | - | chr1_4:21705912-21705931 | Msa0156100:intron | 35.0% | |
| AGAGAAAATACCACACAAGT+GGG | + | chr1_4:21706092-21706111 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr1_4:21706463-21706482 | Msa0156100:intron | 35.0% | |
| CATTAACAACTTATCACAGC+TGG | - | chr1_4:21706516-21706535 | Msa0156100:intron | 35.0% | |
| AGTCTACACTTGTTCATGTA+TGG | - | chr1_4:21706771-21706790 | Msa0156100:CDS | 35.0% | |
| TAACCAGAAGAAGAATTCCA+GGG | + | chr1_4:21706989-21707008 | None:intergenic | 35.0% | |
| CAAAATAGTCCATGAAGTGT+CGG | + | chr1_4:21707115-21707134 | None:intergenic | 35.0% | |
| GGCGATAGAATATATCTAAC+GGG | + | chr1_4:21707207-21707226 | None:intergenic | 35.0% | |
| GGGCGATAGAATATATCTAA+CGG | + | chr1_4:21707208-21707227 | None:intergenic | 35.0% | |
| ATTACTACAGGTTCTTCTAG+TGG | - | chr1_4:21707385-21707404 | Msa0156100:intron | 35.0% | |
| ! | AACATAAGATTTTACCTGGC+TGG | + | chr1_4:21707435-21707454 | None:intergenic | 35.0% |
| ! | ACATTAAAAGCATACCTGGA+GGG | + | chr1_4:21707687-21707706 | None:intergenic | 35.0% |
| ! | AACATTAAAAGCATACCTGG+AGG | + | chr1_4:21707688-21707707 | None:intergenic | 35.0% |
| TGTGATAATCACTTCTGTGA+TGG | - | chr1_4:21707913-21707932 | Msa0156100:intron | 35.0% | |
| ! | ATTGGGATTTTGTCAAGGAT+TGG | - | chr1_4:21707954-21707973 | Msa0156100:intron | 35.0% |
| ! | TTGGGATTTTGTCAAGGATT+GGG | - | chr1_4:21707955-21707974 | Msa0156100:intron | 35.0% |
| GAGCATATACTACATGTCTA+TGG | - | chr1_4:21708039-21708058 | Msa0156100:intron | 35.0% | |
| ! | GAATTTGGCTTCGGTTAAAT+TGG | - | chr1_4:21708109-21708128 | Msa0156100:intron | 35.0% |
| !!! | AAGAAGTTACCGCTTTTTTG+TGG | + | chr1_4:21708169-21708188 | None:intergenic | 35.0% |
| !! | TTTTATTTAGGCTAATCGGG+CGG | + | chr1_4:21708363-21708382 | None:intergenic | 35.0% |
| !!! | GGTCAAGTGTCTCTTTTTTT+GGG | - | chr1_4:21708403-21708422 | Msa0156100:intron | 35.0% |
| AAAAATGGACATTGGATTGC+AGG | - | chr1_4:21708455-21708474 | Msa0156100:intron | 35.0% | |
| ! | TCTAACAACCTTGTTTGAAC+AGG | + | chr1_4:21708540-21708559 | None:intergenic | 35.0% |
| ! | ATTTCTGTTAGCTTCATTGG+AGG | - | chr1_4:21708560-21708579 | Msa0156100:intron | 35.0% |
| TCATTGGAGGTTATTAGAAG+AGG | - | chr1_4:21708573-21708592 | Msa0156100:intron | 35.0% | |
| CATTGGAGGTTATTAGAAGA+GGG | - | chr1_4:21708574-21708593 | Msa0156100:intron | 35.0% | |
| !! | TAACTTGTTTGTGAACAGGT+TGG | - | chr1_4:21708720-21708739 | Msa0156100:intron | 35.0% |
| AACGAGCATCTAAACAATGT+TGG | - | chr1_4:21708745-21708764 | Msa0156100:intron | 35.0% | |
| ! | CGCATCTTTTACATCACAAT+TGG | + | chr1_4:21708933-21708952 | None:intergenic | 35.0% |
| TAAAAGATGCGCATTGCAAA+TGG | - | chr1_4:21708942-21708961 | Msa0156100:CDS | 35.0% | |
| GCGGATAGAAGAATGTAAAG+AGG | + | chr1_4:21698175-21698194 | None:intergenic | 40.0% | |
| AGAGAAAGTAGGTGAAGTAG+GGG | + | chr1_4:21698202-21698221 | None:intergenic | 40.0% | |
| GAGAGAAAGTAGGTGAAGTA+GGG | + | chr1_4:21698203-21698222 | None:intergenic | 40.0% | |
| TGAGAGAAAGTAGGTGAAGT+AGG | + | chr1_4:21698204-21698223 | None:intergenic | 40.0% | |
| ! | TTGGGAGCTTGTTCTTCTTT+AGG | + | chr1_4:21698354-21698373 | None:intergenic | 40.0% |
| AAAGAAGAACAAGCTCCCAA+AGG | - | chr1_4:21698354-21698373 | Msa0156100:three_prime_UTR | 40.0% | |
| TCATTCATGGCTTCATTAGC+TGG | - | chr1_4:21698838-21698857 | Msa0156100:intron | 40.0% | |
| TCAACTTGACCGGAAATCAT+GGG | - | chr1_4:21699194-21699213 | Msa0156100:intron | 40.0% | |
| ! | ATGGTGGGACTGAAATCTAA+TGG | - | chr1_4:21699236-21699255 | Msa0156100:intron | 40.0% |
| ATGCGATGGCACAAAATTGA+TGG | - | chr1_4:21699407-21699426 | Msa0156100:CDS | 40.0% | |
| ACGAGTTTGGCATTATTGAG+GGG | - | chr1_4:21700046-21700065 | Msa0156100:CDS | 40.0% | |
| AAGAGAGTGAGTTTCTTGAG+AGG | - | chr1_4:21700391-21700410 | Msa0156100:CDS | 40.0% | |
| AGAGAGTGAGTTTCTTGAGA+GGG | - | chr1_4:21700392-21700411 | Msa0156100:CDS | 40.0% | |
| !!! | TCGGCGGCAGATTATTTTTT+CGG | + | chr1_4:21700482-21700501 | None:intergenic | 40.0% |
| GTCTAAACCTCTAGTAGAAG+AGG | - | chr1_4:21700749-21700768 | Msa0156100:intron | 40.0% | |
| AAATCGGAGTCCTTAAACTC+AGG | - | chr1_4:21700910-21700929 | Msa0156100:intron | 40.0% | |
| AATCGGAGTCCTTAAACTCA+GGG | - | chr1_4:21700911-21700930 | Msa0156100:intron | 40.0% | |
| CATAGCCCTTCATTAGTATG+AGG | - | chr1_4:21700935-21700954 | Msa0156100:intron | 40.0% | |
| GGCTACCTCATACTAATGAA+GGG | + | chr1_4:21700943-21700962 | None:intergenic | 40.0% | |
| TGGCTACCTCATACTAATGA+AGG | + | chr1_4:21700944-21700963 | None:intergenic | 40.0% | |
| TCATTAGTATGAGGTAGCCA+AGG | - | chr1_4:21700944-21700963 | Msa0156100:intron | 40.0% | |
| !! | ATCAAAAGGCACTTGGAGAA+AGG | + | chr1_4:21702084-21702103 | None:intergenic | 40.0% |
| !! | GCACTAAATCAAAAGGCACT+TGG | + | chr1_4:21702091-21702110 | None:intergenic | 40.0% |
| CACACCAACAAAGGCTATAA+CGG | - | chr1_4:21702475-21702494 | Msa0156100:intron | 40.0% | |
| !! | GGCTGTTACTTCCATTTTGT+GGG | - | chr1_4:21702496-21702515 | Msa0156100:intron | 40.0% |
| !! | TGTTACTTCCATTTTGTGGG+AGG | - | chr1_4:21702499-21702518 | Msa0156100:intron | 40.0% |
| ! | TTCCATTTTGTGGGAGGATT+TGG | - | chr1_4:21702505-21702524 | Msa0156100:intron | 40.0% |
| GTTGAACTCTATAAAGGCCT+TGG | - | chr1_4:21702614-21702633 | Msa0156100:intron | 40.0% | |
| !!! | TGTAAGTTTTGAGAAGGCCA+AGG | + | chr1_4:21702634-21702653 | None:intergenic | 40.0% |
| ! | TTGGCCTTCTCAAAACTTAC+AGG | - | chr1_4:21702633-21702652 | Msa0156100:intron | 40.0% |
| CAGTAGAGCACGTAAAATGT+TGG | - | chr1_4:21702946-21702965 | Msa0156100:intron | 40.0% | |
| ! | TTGGATAATTGGTGACTTGG+TGG | - | chr1_4:21702965-21702984 | Msa0156100:intron | 40.0% |
| !! | TGGATAATTGGTGACTTGGT+GGG | - | chr1_4:21702966-21702985 | Msa0156100:intron | 40.0% |
| GGATATTAGCTGGGTATTAG+TGG | - | chr1_4:21702987-21703006 | Msa0156100:intron | 40.0% | |
| GGTCTTGATTATCCGATGTT+CGG | - | chr1_4:21703432-21703451 | Msa0156100:intron | 40.0% | |
| TGATTATCCGATGTTCGGTT+AGG | - | chr1_4:21703437-21703456 | Msa0156100:intron | 40.0% | |
| TGGCAGCTCACTAAATATAG+TGG | - | chr1_4:21704233-21704252 | Msa0156100:intron | 40.0% | |
| CGTGCACTATACATACATAC+AGG | - | chr1_4:21704319-21704338 | Msa0156100:intron | 40.0% | |
| GCGAAGCTAAGTAACAACTA+TGG | - | chr1_4:21704343-21704362 | Msa0156100:intron | 40.0% | |
| TAACAACTATGGGGTAGCAT+TGG | - | chr1_4:21704354-21704373 | Msa0156100:intron | 40.0% | |
| !!! | CTAGCAACTTTTTTACGAGG+GGG | + | chr1_4:21704671-21704690 | None:intergenic | 40.0% |
| !!! | GCTAGCAACTTTTTTACGAG+GGG | + | chr1_4:21704672-21704691 | None:intergenic | 40.0% |
| AACCCTATTGATCAATCAGG+TGG | - | chr1_4:21705062-21705081 | Msa0156100:intron | 40.0% | |
| AGCCACCTGATTGATCAATA+GGG | + | chr1_4:21705067-21705086 | None:intergenic | 40.0% | |
| AAGCCACCTGATTGATCAAT+AGG | + | chr1_4:21705068-21705087 | None:intergenic | 40.0% | |
| AGTGCAGAAAGGTTCTCATA+TGG | - | chr1_4:21705425-21705444 | Msa0156100:intron | 40.0% | |
| CATATGGTCACCTTCTTTGT+CGG | - | chr1_4:21705441-21705460 | Msa0156100:intron | 40.0% | |
| CTGATGTGATTGTCACATAG+TGG | - | chr1_4:21705760-21705779 | Msa0156100:intron | 40.0% | |
| TATTCCGAGAAAGACTTGTG+TGG | - | chr1_4:21705810-21705829 | Msa0156100:intron | 40.0% | |
| TTTGGTTGTGACCACACAAT+GGG | - | chr1_4:21705930-21705949 | Msa0156100:intron | 40.0% | |
| GAAAATACTTGTGTGGACCA+GGG | + | chr1_4:21705963-21705982 | None:intergenic | 40.0% | |
| TTCTCTACAGGGTTATGTAC+AGG | - | chr1_4:21706028-21706047 | Msa0156100:intron | 40.0% | |
| GAGAGAAAATACCACACAAG+TGG | + | chr1_4:21706093-21706112 | None:intergenic | 40.0% | |
| ! | ATATAAGCTGGCTCAGTGTT+AGG | + | chr1_4:21706115-21706134 | None:intergenic | 40.0% |
| TAACACTGAGCCAGCTTATA+TGG | - | chr1_4:21706114-21706133 | Msa0156100:intron | 40.0% | |
| TAGACTGCTTCCATATAAGC+TGG | + | chr1_4:21706127-21706146 | None:intergenic | 40.0% | |
| AGAAGTTGTACCTGAAGACA+GGG | + | chr1_4:21706150-21706169 | None:intergenic | 40.0% | |
| TCTTCAGGTACAACTTCTCA+TGG | - | chr1_4:21706152-21706171 | Msa0156100:intron | 40.0% | |
| ! | TTTAGTTCGCGAGCTGTAAT+CGG | + | chr1_4:21706283-21706302 | None:intergenic | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr1_4:21706406-21706425 | Msa0156100:intron | 40.0% | |
| ATGGATGCAACCTATACATG+TGG | - | chr1_4:21706790-21706809 | Msa0156100:CDS | 40.0% | |
| ATGCAACCTATACATGTGGA+AGG | - | chr1_4:21706794-21706813 | Msa0156100:CDS | 40.0% | |
| TTGTAGCCTTCCACATGTAT+AGG | + | chr1_4:21706803-21706822 | None:intergenic | 40.0% | |
| CTATGCTTTAATGCTGTGCT+TGG | + | chr1_4:21706858-21706877 | None:intergenic | 40.0% | |
| TATTCATGACTGCTGTGGTT+GGG | - | chr1_4:21706901-21706920 | Msa0156100:CDS | 40.0% | |
| TGGTTGTGCATCTTCTTCTT+AGG | - | chr1_4:21706928-21706947 | Msa0156100:CDS | 40.0% | |
| GGTTGTGCATCTTCTTCTTA+GGG | - | chr1_4:21706929-21706948 | Msa0156100:CDS | 40.0% | |
| CTAACCAGAAGAAGAATTCC+AGG | + | chr1_4:21706990-21707009 | None:intergenic | 40.0% | |
| !! | CGACACTTCATGGACTATTT+TGG | - | chr1_4:21707113-21707132 | Msa0156100:intron | 40.0% |
| ! | GATACCATTGCTAAGGCATT+TGG | - | chr1_4:21707538-21707557 | Msa0156100:intron | 40.0% |
| CAGAATGACAAGTTTCAGGA+TGG | + | chr1_4:21707607-21707626 | None:intergenic | 40.0% | |
| CATCCTGAAACTTGTCATTC+TGG | - | chr1_4:21707605-21707624 | Msa0156100:intron | 40.0% | |
| CTTCCAGAATGACAAGTTTC+AGG | + | chr1_4:21707611-21707630 | None:intergenic | 40.0% | |
| TGACTCTGATGTTGCACATT+TGG | - | chr1_4:21707802-21707821 | Msa0156100:intron | 40.0% | |
| TGTTGCACATTTGGCTAACA+TGG | - | chr1_4:21707811-21707830 | Msa0156100:intron | 40.0% | |
| GTTGCACATTTGGCTAACAT+GGG | - | chr1_4:21707812-21707831 | Msa0156100:intron | 40.0% | |
| TTGCACATTTGGCTAACATG+GGG | - | chr1_4:21707813-21707832 | Msa0156100:intron | 40.0% | |
| ! | TGGGATTTTGTCAAGGATTG+GGG | - | chr1_4:21707956-21707975 | Msa0156100:intron | 40.0% |
| ATCCTAACTCCAGAAATGCA+TGG | - | chr1_4:21707987-21708006 | Msa0156100:intron | 40.0% | |
| ATCTCTAAGCCATGCATTTC+TGG | + | chr1_4:21707999-21708018 | None:intergenic | 40.0% | |
| CTAAAATACGTTCAATCGGG+TGG | + | chr1_4:21708135-21708154 | None:intergenic | 40.0% | |
| TGGGTTTAGCCACAAAAAAG+CGG | - | chr1_4:21708157-21708176 | Msa0156100:intron | 40.0% | |
| TTTATTTAGGCTAATCGGGC+GGG | + | chr1_4:21708362-21708381 | None:intergenic | 40.0% | |
| AATATTAGGGTTGTGTCGGA+CGG | - | chr1_4:21708381-21708400 | Msa0156100:intron | 40.0% | |
| !!! | GGGTCAAGTGTCTCTTTTTT+TGG | - | chr1_4:21708402-21708421 | Msa0156100:intron | 40.0% |
| ACTGTCATGCACTTCAAAGT+GGG | - | chr1_4:21708513-21708532 | Msa0156100:intron | 40.0% | |
| ! | AGGTTATTAGAAGAGGGCAT+TGG | - | chr1_4:21708580-21708599 | Msa0156100:intron | 40.0% |
| GATGCAGATTCGGATAATTG+AGG | - | chr1_4:21708808-21708827 | Msa0156100:intron | 40.0% | |
| AGAAAGTAGGTGAAGTAGGG+GGG | + | chr1_4:21698200-21698219 | None:intergenic | 45.0% | |
| GAGAAAGTAGGTGAAGTAGG+GGG | + | chr1_4:21698201-21698220 | None:intergenic | 45.0% | |
| GAGTAGCCAAAGTCTCCTTT+GGG | + | chr1_4:21698372-21698391 | None:intergenic | 45.0% | |
| GAAGCCATGAATGAAAGGGA+GGG | + | chr1_4:21698832-21698851 | None:intergenic | 45.0% | |
| TGAAGCCATGAATGAAAGGG+AGG | + | chr1_4:21698833-21698852 | None:intergenic | 45.0% | |
| ! | CACATTTTGCGCACAACTAC+CGG | + | chr1_4:21698992-21699011 | None:intergenic | 45.0% |
| CTCAACTTGACCGGAAATCA+TGG | - | chr1_4:21699193-21699212 | Msa0156100:intron | 45.0% | |
| TTTGTGCCATCGCATACACT+AGG | + | chr1_4:21699402-21699421 | None:intergenic | 45.0% | |
| ATGTCGTGTTATGCTAGGTG+AGG | - | chr1_4:21700229-21700248 | Msa0156100:intron | 45.0% | |
| CTAGGTGAGGAGGAAAATGA+TGG | - | chr1_4:21700242-21700261 | Msa0156100:intron | 45.0% | |
| GATGGAGGATAGTGAAGAAG+AGG | - | chr1_4:21700260-21700279 | Msa0156100:intron | 45.0% | |
| GAGAGTGAGTTTCTTGAGAG+GGG | - | chr1_4:21700393-21700412 | Msa0156100:CDS | 45.0% | |
| !!! | GCAGATTATTTTTTCGGCGC+CGG | + | chr1_4:21700476-21700495 | None:intergenic | 45.0% |
| ! | ATCTCGGCGTTGGAATTTCT+CGG | + | chr1_4:21700501-21700520 | None:intergenic | 45.0% |
| GGGAGAACGAGAGAAAATCT+CGG | + | chr1_4:21700517-21700536 | None:intergenic | 45.0% | |
| AGTCTAGCCTCTTCTACTAG+AGG | + | chr1_4:21700759-21700778 | None:intergenic | 45.0% | |
| ATCGGAGTCCTTAAACTCAG+GGG | - | chr1_4:21700912-21700931 | Msa0156100:intron | 45.0% | |
| TATAGCCTTTGTTGGTGTGG+TGG | + | chr1_4:21702474-21702493 | None:intergenic | 45.0% | |
| CGTTATAGCCTTTGTTGGTG+TGG | + | chr1_4:21702477-21702496 | None:intergenic | 45.0% | |
| ACAGCCGTTATAGCCTTTGT+TGG | + | chr1_4:21702482-21702501 | None:intergenic | 45.0% | |
| !! | CGGCTGTTACTTCCATTTTG+TGG | - | chr1_4:21702495-21702514 | Msa0156100:intron | 45.0% |
| CACCAAATCCTCCCACAAAA+TGG | + | chr1_4:21702510-21702529 | None:intergenic | 45.0% | |
| !! | TGACTTGGTGGGATATTAGC+TGG | - | chr1_4:21702977-21702996 | Msa0156100:intron | 45.0% |
| !! | GACTTGGTGGGATATTAGCT+GGG | - | chr1_4:21702978-21702997 | Msa0156100:intron | 45.0% |
| GAAGTGGTTTCGGTTAGAAC+AGG | + | chr1_4:21703337-21703356 | None:intergenic | 45.0% | |
| ! | TGTTAATCCTCTGGTTCCCA+GGG | - | chr1_4:21703403-21703422 | Msa0156100:intron | 45.0% |
| ! | AATCAAGACCCCTTTTCCCT+GGG | + | chr1_4:21703422-21703441 | None:intergenic | 45.0% |
| ! | TAATCAAGACCCCTTTTCCC+TGG | + | chr1_4:21703423-21703442 | None:intergenic | 45.0% |
| TTGTCCCTGTGAGCTTAACT+CGG | - | chr1_4:21703746-21703765 | Msa0156100:intron | 45.0% | |
| !! | AACAGTGTCGATGCCTGAAA+AGG | - | chr1_4:21704046-21704065 | Msa0156100:intron | 45.0% |
| TGAGAACCTTTCTGCACTTG+AGG | + | chr1_4:21705423-21705442 | None:intergenic | 45.0% | |
| TGGTCCACACAAGTCTTTCT+CGG | + | chr1_4:21705817-21705836 | None:intergenic | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | + | chr1_4:21705843-21705862 | None:intergenic | 45.0% | |
| CTTTGGTTGTGACCACACAA+TGG | - | chr1_4:21705929-21705948 | Msa0156100:intron | 45.0% | |
| TTGGTTGTGACCACACAATG+GGG | - | chr1_4:21705931-21705950 | Msa0156100:intron | 45.0% | |
| GGAAAATACTTGTGTGGACC+AGG | + | chr1_4:21705964-21705983 | None:intergenic | 45.0% | |
| GAGAAGTTGTACCTGAAGAC+AGG | + | chr1_4:21706151-21706170 | None:intergenic | 45.0% | |
| CACTGTATTCATGACTGCTG+TGG | - | chr1_4:21706896-21706915 | Msa0156100:CDS | 45.0% | |
| GTATTCATGACTGCTGTGGT+TGG | - | chr1_4:21706900-21706919 | Msa0156100:CDS | 45.0% | |
| !!! | TAGGGCTGCAGGATTTTTTC+CGG | - | chr1_4:21706947-21706966 | Msa0156100:CDS | 45.0% |
| CAGAAGAAGAATTCCAGGGA+TGG | + | chr1_4:21706985-21707004 | None:intergenic | 45.0% | |
| CATCCCTGGAATTCTTCTTC+TGG | - | chr1_4:21706983-21707002 | Msa0156100:CDS | 45.0% | |
| GCTCATAATCAGCAGCACAA+AGG | + | chr1_4:21707143-21707162 | None:intergenic | 45.0% | |
| GGATGAAGCAGAAACGAGTT+GGG | + | chr1_4:21707228-21707247 | None:intergenic | 45.0% | |
| GTCTCCAAATGCCTTAGCAA+TGG | + | chr1_4:21707545-21707564 | None:intergenic | 45.0% | |
| ! | CTAAGGCATTTGGAGACAAC+TGG | - | chr1_4:21707548-21707567 | Msa0156100:intron | 45.0% |
| ! | GGGATTTTGTCAAGGATTGG+GGG | - | chr1_4:21707957-21707976 | Msa0156100:intron | 45.0% |
| !! | AGCCATGCATTTCTGGAGTT+AGG | + | chr1_4:21707992-21708011 | None:intergenic | 45.0% |
| GCATTGCCTGATTGTGTAAC+CGG | - | chr1_4:21708252-21708271 | Msa0156100:intron | 45.0% | |
| CATTGCCTGATTGTGTAACC+GGG | - | chr1_4:21708253-21708272 | Msa0156100:intron | 45.0% | |
| ! | TTTTGCCCGGTTACACAATC+AGG | + | chr1_4:21708261-21708280 | None:intergenic | 45.0% |
| TTATTTAGGCTAATCGGGCG+GGG | + | chr1_4:21708361-21708380 | None:intergenic | 45.0% | |
| ATATTAGGGTTGTGTCGGAC+GGG | - | chr1_4:21708382-21708401 | Msa0156100:intron | 45.0% | |
| GACTGTCATGCACTTCAAAG+TGG | - | chr1_4:21708512-21708531 | Msa0156100:intron | 45.0% | |
| CTGTCATGCACTTCAAAGTG+GGG | - | chr1_4:21708514-21708533 | Msa0156100:intron | 45.0% | |
| !! | GAGGGCATTGGAATTTCTAC+AGG | - | chr1_4:21708592-21708611 | Msa0156100:intron | 45.0% |
| TCTGCATCACGAAAGGGTAA+TGG | + | chr1_4:21708796-21708815 | None:intergenic | 45.0% | |
| ACCCTTTCGTGATGCAGATT+CGG | - | chr1_4:21708798-21708817 | Msa0156100:intron | 45.0% | |
| TCCGAATCTGCATCACGAAA+GGG | + | chr1_4:21708802-21708821 | None:intergenic | 45.0% | |
| ATCCGAATCTGCATCACGAA+AGG | + | chr1_4:21708803-21708822 | None:intergenic | 45.0% | |
| !! | AAAATAAATAAATAAGTATA+TGG | - | chr1_4:21698766-21698785 | Msa0156100:CDS | 5.0% |
| !!! | TTTATTTTTTTCTTTAAATT+TGG | - | chr1_4:21701690-21701709 | Msa0156100:intron | 5.0% |
| !! | AAAAAAATACATAAAATTAA+AGG | - | chr1_4:21702811-21702830 | Msa0156100:intron | 5.0% |
| !!! | AATTTTTTTAATCAATTTAA+TGG | + | chr1_4:21703381-21703400 | None:intergenic | 5.0% |
| !! | ATTAAATTGATTAAAAAAAT+TGG | - | chr1_4:21703380-21703399 | Msa0156100:intron | 5.0% |
| !!! | AAAAATAATTTTTTTACATT+AGG | - | chr1_4:21704645-21704664 | Msa0156100:CDS | 5.0% |
| GAAAGTAGGTGAAGTAGGGG+GGG | + | chr1_4:21698199-21698218 | None:intergenic | 50.0% | |
| CAAGCTCCCAAAGGAGACTT+TGG | - | chr1_4:21698363-21698382 | Msa0156100:three_prime_UTR | 50.0% | |
| GGAGTAGCCAAAGTCTCCTT+TGG | + | chr1_4:21698373-21698392 | None:intergenic | 50.0% | |
| ACAGCCCTCCCTTTCATTCA+TGG | - | chr1_4:21698825-21698844 | Msa0156100:intron | 50.0% | |
| CTTGACCGGAAATCATGGGA+TGG | - | chr1_4:21699198-21699217 | Msa0156100:intron | 50.0% | |
| ATGGGATGGTGCGGAAATCA+TGG | - | chr1_4:21699212-21699231 | Msa0156100:intron | 50.0% | |
| TGGGATGGTGCGGAAATCAT+GGG | - | chr1_4:21699213-21699232 | Msa0156100:intron | 50.0% | |
| ATGGTGCGGAAATCATGGGA+TGG | - | chr1_4:21699217-21699236 | Msa0156100:intron | 50.0% | |
| TGCGGAAATCATGGGATGGT+GGG | - | chr1_4:21699221-21699240 | Msa0156100:intron | 50.0% | |
| TCGTGTTATGCTAGGTGAGG+AGG | - | chr1_4:21700232-21700251 | Msa0156100:intron | 50.0% | |
| GGTGAGGAGGAAAATGATGG+AGG | - | chr1_4:21700245-21700264 | Msa0156100:intron | 50.0% | |
| ACGAGAGAAAATCTCGGCGT+TGG | + | chr1_4:21700511-21700530 | None:intergenic | 50.0% | |
| TTCGGTTAGAACAGGTGTGC+TGG | + | chr1_4:21703329-21703348 | None:intergenic | 50.0% | |
| ! | GTGTTAATCCTCTGGTTCCC+AGG | - | chr1_4:21703402-21703421 | Msa0156100:intron | 50.0% |
| CCAACCGAGTTAAGCTCACA+GGG | + | chr1_4:21703753-21703772 | None:intergenic | 50.0% | |
| ACCAACCGAGTTAAGCTCAC+AGG | + | chr1_4:21703754-21703773 | None:intergenic | 50.0% | |
| GTGAGCTTAACTCGGTTGGT+AGG | - | chr1_4:21703754-21703773 | Msa0156100:intron | 50.0% | |
| AGGAGTCATGGTTCGAACTC+TGG | - | chr1_4:21703800-21703819 | Msa0156100:intron | 50.0% | |
| GATGCCTGAAAAGGACCAGT+GGG | - | chr1_4:21704055-21704074 | Msa0156100:intron | 50.0% | |
| AAAAGGACCAGTGGGACTGT+GGG | - | chr1_4:21704063-21704082 | Msa0156100:intron | 50.0% | |
| GAGAAAGACTTGTGTGGACC+AGG | - | chr1_4:21705816-21705835 | Msa0156100:intron | 50.0% | |
| TGGACCAGGACCACACAATT+GGG | - | chr1_4:21705830-21705849 | Msa0156100:intron | 50.0% | |
| CAAACCCAATTGTGTGGTCC+TGG | + | chr1_4:21705837-21705856 | None:intergenic | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | - | chr1_4:21705835-21705854 | Msa0156100:intron | 50.0% | |
| TGTGACCACACAATGGGGTT+TGG | - | chr1_4:21705936-21705955 | Msa0156100:intron | 50.0% | |
| AAGCAGTCTACCCTGTCTTC+AGG | - | chr1_4:21706137-21706156 | Msa0156100:intron | 50.0% | |
| CATCTTCTTCTTAGGGCTGC+AGG | - | chr1_4:21706936-21706955 | Msa0156100:CDS | 50.0% | |
| !!! | AGGGCTGCAGGATTTTTTCC+GGG | - | chr1_4:21706948-21706967 | Msa0156100:CDS | 50.0% |
| ATCACTGGACCGACACTTCA+TGG | - | chr1_4:21707103-21707122 | Msa0156100:intron | 50.0% | |
| CGGATGAAGCAGAAACGAGT+TGG | + | chr1_4:21707229-21707248 | None:intergenic | 50.0% | |
| ! | TGGAGGGCACGCCAAAAATA+TGG | + | chr1_4:21707671-21707690 | None:intergenic | 50.0% |
| !!! | ATATTTTTGGCGTGCCCTCC+AGG | - | chr1_4:21707670-21707689 | Msa0156100:intron | 50.0% |
| ! | GGGGAAGTATGTGTCTGCAA+TGG | - | chr1_4:21707832-21707851 | Msa0156100:intron | 50.0% |
| GCCATATGTTACTCTAGCCC+CGG | + | chr1_4:21707864-21707883 | None:intergenic | 50.0% | |
| GGGCTAGAGTAACATATGGC+AGG | - | chr1_4:21707864-21707883 | Msa0156100:intron | 50.0% | |
| TATTTAGGCTAATCGGGCGG+GGG | + | chr1_4:21708360-21708379 | None:intergenic | 50.0% | |
| AAGTGGGGCCTGTTCAAACA+AGG | - | chr1_4:21708529-21708548 | Msa0156100:intron | 50.0% | |
| CCGCACCATCCCATGATTTC+CGG | + | chr1_4:21699206-21699225 | None:intergenic | 55.0% | |
| CCGGAAATCATGGGATGGTG+CGG | - | chr1_4:21699203-21699222 | Msa0156100:intron | 55.0% | |
| GTGCGGAAATCATGGGATGG+TGG | - | chr1_4:21699220-21699239 | Msa0156100:intron | 55.0% | |
| GAGACGCCTAGTGTATGCGA+TGG | - | chr1_4:21699393-21699412 | Msa0156100:CDS | 55.0% | |
| ! | TCGGCGTTGGAATTTCTCGG+CGG | + | chr1_4:21700498-21700517 | None:intergenic | 55.0% |
| GGGCTATGCCCCTGAGTTTA+AGG | + | chr1_4:21700923-21700942 | None:intergenic | 55.0% | |
| TCCAGCCACCACACCAACAA+AGG | - | chr1_4:21702466-21702485 | Msa0156100:intron | 55.0% | |
| ! | TCCTCTGGTTCCCAGGGAAA+AGG | - | chr1_4:21703409-21703428 | Msa0156100:intron | 55.0% |
| ! | CCTCTGGTTCCCAGGGAAAA+GGG | - | chr1_4:21703410-21703429 | Msa0156100:intron | 55.0% |
| ! | CTCTGGTTCCCAGGGAAAAG+GGG | - | chr1_4:21703411-21703430 | Msa0156100:intron | 55.0% |
| CCCTGTGAGCTTAACTCGGT+TGG | - | chr1_4:21703750-21703769 | Msa0156100:intron | 55.0% | |
| CGATGCCTGAAAAGGACCAG+TGG | - | chr1_4:21704054-21704073 | Msa0156100:intron | 55.0% | |
| ! | CAGTCCCACTGGTCCTTTTC+AGG | + | chr1_4:21704062-21704081 | None:intergenic | 55.0% |
| GAAAAGGACCAGTGGGACTG+TGG | - | chr1_4:21704062-21704081 | Msa0156100:intron | 55.0% | |
| GTGGACCAGGACCACACAAT+TGG | - | chr1_4:21705829-21705848 | Msa0156100:intron | 55.0% | |
| AGGGACCAAACCCCATTGTG+TGG | + | chr1_4:21705944-21705963 | None:intergenic | 55.0% | |
| ! | ACACAATGGGGTTTGGTCCC+TGG | - | chr1_4:21705943-21705962 | Msa0156100:intron | 55.0% |
| GCAATCTTGGCCCACTTGTG+TGG | - | chr1_4:21706079-21706098 | Msa0156100:intron | 55.0% | |
| GACTGCTGTGGTTGGGTCAA+TGG | - | chr1_4:21706908-21706927 | Msa0156100:CDS | 55.0% | |
| GGGATGGCATCAACATTGCC+CGG | + | chr1_4:21706969-21706988 | None:intergenic | 55.0% | |
| GGCAATGTTGATGCCATCCC+TGG | - | chr1_4:21706969-21706988 | Msa0156100:CDS | 55.0% | |
| GGCTGATCAACTTACCAGCC+AGG | - | chr1_4:21707418-21707437 | Msa0156100:intron | 55.0% | |
| GTGTCTGCAATGGTTGCAGC+CGG | - | chr1_4:21707842-21707861 | Msa0156100:intron | 55.0% | |
| TGTCTGCAATGGTTGCAGCC+GGG | - | chr1_4:21707843-21707862 | Msa0156100:intron | 55.0% | |
| GCCGGGGCTAGAGTAACATA+TGG | - | chr1_4:21707860-21707879 | Msa0156100:intron | 55.0% | |
| TAGGTGAAGTAGGGGGGGTG+CGG | + | chr1_4:21698194-21698213 | None:intergenic | 60.0% | |
| GCCTTTGTTGGTGTGGTGGC+TGG | + | chr1_4:21702470-21702489 | None:intergenic | 60.0% | |
| ! | CCCTTTTCCCTGGGAACCAG+AGG | + | chr1_4:21703413-21703432 | None:intergenic | 60.0% |
| GTCTGCAATGGTTGCAGCCG+GGG | - | chr1_4:21707844-21707863 | Msa0156100:intron | 60.0% | |
| TGCTGCTCCCACAGTCCCAC+TGG | + | chr1_4:21704073-21704092 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 21698155 | 21709143 | 21698155 | ID=Msa0156100;Name=Msa0156100 |
| chr1_4 | mRNA | 21698155 | 21709143 | 21698155 | ID=Msa0156100-mRNA-1;Parent=Msa0156100;Name=Msa0156100-mRNA-1;_AED=0.12;_eAED=0.12;_QI=82|1|1|1|1|1|14|315|772 |
| chr1_4 | exon | 21698155 | 21698560 | 21698155 | ID=Msa0156100-mRNA-1:exon:7884;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21698685 | 21698821 | 21698685 | ID=Msa0156100-mRNA-1:exon:7883;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21699238 | 21699516 | 21699238 | ID=Msa0156100-mRNA-1:exon:7882;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21699607 | 21699759 | 21699607 | ID=Msa0156100-mRNA-1:exon:7881;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21699859 | 21699903 | 21699859 | ID=Msa0156100-mRNA-1:exon:7880;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21700013 | 21700117 | 21700013 | ID=Msa0156100-mRNA-1:exon:7879;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21700294 | 21700543 | 21700294 | ID=Msa0156100-mRNA-1:exon:7878;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21701140 | 21701260 | 21701140 | ID=Msa0156100-mRNA-1:exon:7877;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21701836 | 21701965 | 21701836 | ID=Msa0156100-mRNA-1:exon:7876;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21702146 | 21702217 | 21702146 | ID=Msa0156100-mRNA-1:exon:7875;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21703011 | 21703059 | 21703011 | ID=Msa0156100-mRNA-1:exon:7874;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21704644 | 21704986 | 21704644 | ID=Msa0156100-mRNA-1:exon:7873;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21706740 | 21707052 | 21706740 | ID=Msa0156100-mRNA-1:exon:7872;Parent=Msa0156100-mRNA-1 |
| chr1_4 | exon | 21708831 | 21709143 | 21708831 | ID=Msa0156100-mRNA-1:exon:7871;Parent=Msa0156100-mRNA-1 |
| chr1_4 | five_prime_UTR | 21709062 | 21709143 | 21709062 | ID=Msa0156100-mRNA-1:five_prime_utr;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21708831 | 21709061 | 21708831 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21706740 | 21707052 | 21706740 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21704644 | 21704986 | 21704644 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21703011 | 21703059 | 21703011 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21702146 | 21702217 | 21702146 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21701836 | 21701965 | 21701836 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21701140 | 21701260 | 21701140 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21700294 | 21700543 | 21700294 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21700013 | 21700117 | 21700013 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21699859 | 21699903 | 21699859 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21699607 | 21699759 | 21699607 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21699238 | 21699516 | 21699238 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21698685 | 21698821 | 21698685 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | CDS | 21698470 | 21698560 | 21698470 | ID=Msa0156100-mRNA-1:cds;Parent=Msa0156100-mRNA-1 |
| chr1_4 | three_prime_UTR | 21698155 | 21698469 | 21698155 | ID=Msa0156100-mRNA-1:three_prime_utr;Parent=Msa0156100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
