AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0113640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113640 MtrunA17_Chr1g0171411 97.419 155 4 0 1 155 342 496 2.66e-108 317
Msa0113640 MtrunA17_Chr1g0199171 80.000 155 31 0 1 155 348 502 1.06e-86 262
Msa0113640 MtrunA17_Chr2g0327401 70.068 147 44 0 2 148 360 506 4.94e-70 219
Msa0113640 MtrunA17_Chr4g0028271 69.444 144 44 0 1 144 355 498 6.75e-69 216
Msa0113640 MtrunA17_Chr4g0028261 66.667 141 47 0 1 141 377 517 9.68e-68 213
Msa0113640 MtrunA17_Chr2g0327371 65.957 141 48 0 1 141 374 514 3.63e-64 204
Msa0113640 MtrunA17_Chr2g0327381 64.539 141 50 0 1 141 398 538 5.09e-64 204
Msa0113640 MtrunA17_Chr4g0028281 66.187 139 47 0 3 141 355 493 1.24e-63 202
Msa0113640 MtrunA17_Chr4g0028241 57.639 144 57 2 1 141 349 491 6.02e-51 169
Msa0113640 MtrunA17_Chr4g0027731 37.838 111 67 1 25 133 339 449 1.73e-17 78.2
Msa0113640 MtrunA17_Chr2g0320571 34.646 127 79 2 19 142 344 469 2.09e-15 72.4
Msa0113640 MtrunA17_Chr5g0447441 30.657 137 92 1 3 136 295 431 6.83e-15 70.9
Msa0113640 MtrunA17_Chr4g0044051 30.935 139 93 1 1 136 297 435 3.00e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113640 AT3G10410.1 70.186 161 42 1 1 155 356 516 5.59e-75 233
Msa0113640 AT3G45010.1 73.944 142 37 0 1 142 360 501 2.85e-74 230
Msa0113640 AT5G22980.1 67.376 141 46 0 1 141 355 495 3.01e-66 209
Msa0113640 AT2G27920.2 36.207 116 72 1 25 138 270 385 1.19e-17 79.0
Msa0113640 AT2G27920.3 36.207 116 72 1 25 138 275 390 1.43e-17 78.6
Msa0113640 AT2G27920.1 36.207 116 72 1 25 138 342 457 2.72e-17 78.2
Msa0113640 AT1G15000.1 32.609 138 90 3 4 139 287 423 2.04e-12 63.9

Find 173 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCATCGAGCGGCGATTT+TGG 0.195868 1_3:+29659527 Msa0113640:five_prime_UTR
AAAAGTCATTCTTTGCATAT+TGG 0.214374 1_3:-29661691 None:intergenic
TTGGCTTTGTTCTACGAAAA+TGG 0.225591 1_3:+29659978 Msa0113640:five_prime_UTR
GAACAAGATTGACCCCATTT+TGG 0.231873 1_3:-29659468 None:intergenic
ATTCCAAACCAAAACCAAAA+TGG 0.233752 1_3:+29659454 Msa0113640:five_prime_UTR
AAATGGCCCTTTCAAGATTA+AGG 0.235424 1_3:+29659995 Msa0113640:five_prime_UTR
AAAGTCATTCTTTGCATATT+GGG 0.239208 1_3:-29661690 None:intergenic
CGTCATCATCATCGGAAATT+AGG 0.240787 1_3:-29659691 None:intergenic
GATGTTCCCTATGTTGTTAA+TGG 0.275219 1_3:+29663824 Msa0113640:CDS
TTGTAGCACTGAAGTTTATA+TGG 0.278236 1_3:+29663508 Msa0113640:CDS
TCTCTTACGTGGAACAAATA+TGG 0.284906 1_3:+29660026 Msa0113640:five_prime_UTR
CTCATATGTTATTTCTGATT+TGG 0.296461 1_3:+29664624 Msa0113640:three_prime_UTR
TGACGTCCGGGAACAAATTA+AGG 0.303739 1_3:-29659583 None:intergenic
GGACACTATATTCCTGCTTT+AGG 0.312182 1_3:+29661737 Msa0113640:five_prime_UTR
AAGGTTACACATGCACTTCT+TGG 0.326383 1_3:+29661984 Msa0113640:five_prime_UTR
GTGAATCCCGAACCGATTCT+TGG 0.328298 1_3:-29663457 None:intergenic
CAGCATATCTAATGCAGCTT+TGG 0.330927 1_3:-29664471 None:intergenic
TATACATGTCGGACGAGTTT+AGG 0.331620 1_3:-29664696 None:intergenic
CCCATCTCCAGAGCATAATC+TGG 0.360966 1_3:-29661951 None:intergenic
AGCATATCTAATGCAGCTTT+GGG 0.361552 1_3:-29664470 None:intergenic
CATTAGCTTGGTTTCCTTGA+CGG 0.366556 1_3:-29661769 None:intergenic
GATGTTTCCGTTGATGATTT+TGG 0.370027 1_3:+29659716 Msa0113640:five_prime_UTR
TAGGCTTTATACTGAATTGC+AGG 0.370273 1_3:-29661927 None:intergenic
ACCTCGGTTTGTGAATTTGA+TGG 0.371622 1_3:+29664767 Msa0113640:three_prime_UTR
GTCACTGAAAATGAGATTAC+AGG 0.378586 1_3:-29662757 None:intergenic
ATCGATTTACTCATTTATGC+TGG 0.380104 1_3:+29663593 Msa0113640:CDS
TTTCTGACCGGACCATTTCA+TGG 0.393553 1_3:-29663783 None:intergenic
AAGACGACCCTGTTGTCATT+TGG 0.396175 1_3:+29659925 Msa0113640:five_prime_UTR
TTCCAAACCAAAACCAAAAT+GGG 0.397604 1_3:+29659455 Msa0113640:five_prime_UTR
TTCTGAACCAAGAATCGGTT+CGG 0.397853 1_3:+29663450 Msa0113640:CDS
TTGTATGTTGATCAACCAAC+TGG 0.406197 1_3:+29660529 Msa0113640:five_prime_UTR
ATATACATGTATGAGTGTTA+TGG 0.407214 1_3:-29662114 None:intergenic
CCTCGGTTTGTGAATTTGAT+GGG 0.409399 1_3:+29664768 Msa0113640:three_prime_UTR
CCTGTTGTCATTTGGTTGAC+TGG 0.409521 1_3:+29659933 Msa0113640:five_prime_UTR
AGGGATTGGCCATTGGTAAT+GGG 0.409584 1_3:+29661895 Msa0113640:intron
CAGGGATTGGCCATTGGTAA+TGG 0.412483 1_3:+29661894 Msa0113640:intron
GAGAGACCTTAATTTGTTCC+CGG 0.417071 1_3:+29659577 Msa0113640:five_prime_UTR
CCAGTCAACCAAATGACAAC+AGG 0.427275 1_3:-29659933 None:intergenic
TAGATTAATCAAGCAACAAA+AGG 0.430008 1_3:-29664565 None:intergenic
TGATATTCGTCATAATGAAA+AGG 0.431549 1_3:+29660582 Msa0113640:five_prime_UTR
AGGAATTCATATAAATTTGA+AGG 0.435694 1_3:+29661793 Msa0113640:five_prime_UTR
ATTTGGTTGACTGGAGGACC+TGG 0.436159 1_3:+29659942 Msa0113640:five_prime_UTR
ACCTGGCTGTAGTAGTGAAT+TGG 0.438228 1_3:+29659959 Msa0113640:five_prime_UTR
TCTGAACCAAGAATCGGTTC+GGG 0.438534 1_3:+29663451 Msa0113640:CDS
TATGAATTCCTTCATTAGCT+TGG 0.439278 1_3:-29661781 None:intergenic
GCAGCTTTGGGCTGGTCCAT+TGG 0.446131 1_3:-29664458 None:intergenic
GTTGATCAACCAACTGGAAC+TGG 0.446905 1_3:+29660535 Msa0113640:five_prime_UTR
CCCAGATTATGCTCTGGAGA+TGG 0.447662 1_3:+29661950 Msa0113640:five_prime_UTR
TTAACAACATAGGGAACATC+AGG 0.453619 1_3:-29663821 None:intergenic
GTCACATTATATCATCTAAG+AGG 0.458625 1_3:-29664854 None:intergenic
AATATGATCTCATATGCAAC+TGG 0.462944 1_3:+29663618 Msa0113640:CDS
CGTTACTTACTTTGCAGCAT+GGG 0.464920 1_3:-29659771 None:intergenic
ATATGGCTATGTTGGTTGAC+TGG 0.465047 1_3:+29663525 Msa0113640:CDS
TTGGTTGATCAACATACAAA+AGG 0.467873 1_3:-29660525 None:intergenic
TGCTTGATTAATCTAGCAAA+AGG 0.469977 1_3:+29664573 Msa0113640:three_prime_UTR
TTTGGAATCACACAAAAGAA+AGG 0.472131 1_3:-29659439 None:intergenic
GATGGGTTCATGCCATGAAA+TGG 0.475394 1_3:+29663771 Msa0113640:CDS
TGCAGCATGGGAATGTTGAA+TGG 0.478923 1_3:-29659759 None:intergenic
TCGATTTACTCATTTATGCT+GGG 0.480146 1_3:+29663594 Msa0113640:CDS
AACGATCTTGCCACCACGAT+GGG 0.481582 1_3:-29659645 None:intergenic
AATGAGTAGGTAATTCAAGA+TGG 0.483866 1_3:+29663753 Msa0113640:intron
TGAAGTTTATATGGCTATGT+TGG 0.485163 1_3:+29663517 Msa0113640:CDS
TTGGGGATGCTCTGCAAAGA+AGG 0.485380 1_3:-29661672 None:intergenic
CGATGTTGAGGTTGACGTCC+GGG 0.486748 1_3:-29659595 None:intergenic
AGTGACATCTTGTTACATGC+TGG 0.489877 1_3:+29662774 Msa0113640:five_prime_UTR
AAAGTTTCTGAACCAAGAAT+CGG 0.491136 1_3:+29663445 Msa0113640:CDS
ATTCCTATCCTTCTTGAGGA+TGG 0.491791 1_3:+29663569 Msa0113640:CDS
GTTGGTTCCAGCCTGTGAAT+TGG 0.501046 1_3:+29662013 Msa0113640:five_prime_UTR
TACGTGGAACAAATATGGTT+GGG 0.502626 1_3:+29660031 Msa0113640:five_prime_UTR
GGCTACAAATTCTTTCTGAC+CGG 0.502694 1_3:-29663795 None:intergenic
GATATTCGTCATAATGAAAA+GGG 0.503932 1_3:+29660583 Msa0113640:five_prime_UTR
GCGATGTTGAGGTTGACGTC+CGG 0.506704 1_3:-29659596 None:intergenic
AACATCATCGTCATCATCAT+CGG 0.508360 1_3:-29659699 None:intergenic
ATTACAGGTGAATCATATGC+TGG 0.508727 1_3:+29661716 Msa0113640:five_prime_UTR
CCACACCGGGAAGTTTCAAA+CGG 0.509306 1_3:+29664661 Msa0113640:three_prime_UTR
CCAGATTATGCTCTGGAGAT+GGG 0.509495 1_3:+29661951 Msa0113640:five_prime_UTR
TAGCTTTATTGCCAATTCAC+AGG 0.510290 1_3:-29662024 None:intergenic
AAGTCATTCTTTGCATATTG+GGG 0.511520 1_3:-29661689 None:intergenic
AATTAGGTTACGGAACTTGA+GGG 0.512250 1_3:-29659675 None:intergenic
TTTGAACAGGGATTGGCCAT+TGG 0.517096 1_3:+29661888 Msa0113640:intron
GAATCGGTTCGGGATTCACT+AGG 0.517338 1_3:+29663461 Msa0113640:CDS
TGGTATTCCTATCCTTCTTG+AGG 0.521005 1_3:+29663565 Msa0113640:CDS
ATATGCTGAAGAAGTGGACT+CGG 0.522178 1_3:+29664486 Msa0113640:CDS
TTCTGATCCATTAACAACAT+AGG 0.523544 1_3:-29663831 None:intergenic
TATCTAATGCAGCTTTGGGC+TGG 0.523690 1_3:-29664466 None:intergenic
ACCCTTGCTGAATCCATAGC+TGG 0.523879 1_3:+29664512 Msa0113640:CDS
TCACATTATATCATCTAAGA+GGG 0.526436 1_3:-29664853 None:intergenic
GCAGCATGGGAATGTTGAAT+GGG 0.527429 1_3:-29659758 None:intergenic
CATCATCGGAAATTAGGTTA+CGG 0.527500 1_3:-29659685 None:intergenic
GTTGTTAATGGATCAGAAGC+TGG 0.528171 1_3:+29663836 Msa0113640:CDS
AAGTCATCCTTAATCTTGAA+AGG 0.529663 1_3:-29660002 None:intergenic
TCTGATCCATTAACAACATA+GGG 0.533238 1_3:-29663830 None:intergenic
TGCACTTCTTGGCAAAGTGT+TGG 0.533774 1_3:+29661995 Msa0113640:five_prime_UTR
GAACCATGTGACCCGCATCA+TGG 0.535254 1_3:-29664436 None:intergenic
TTTATTGCCAATTCACAGGC+TGG 0.539098 1_3:-29662020 None:intergenic
CTCGGTTTGTGAATTTGATG+GGG 0.539821 1_3:+29664769 Msa0113640:three_prime_UTR
AGCCTACCCAGATTATGCTC+TGG 0.544480 1_3:+29661944 Msa0113640:five_prime_UTR
AACATATGAGTACAGCCTCC+TGG 0.545231 1_3:-29664611 None:intergenic
AATGTGCTTTAAAGATCAAG+TGG 0.549250 1_3:-29664881 None:intergenic
GTTCATGCCATGAAATGGTC+CGG 0.550483 1_3:+29663776 Msa0113640:CDS
AAATTAGGTTACGGAACTTG+AGG 0.552498 1_3:-29659676 None:intergenic
CAAGGAAACCAAGCTAATGA+AGG 0.552843 1_3:+29661773 Msa0113640:five_prime_UTR
CTATGTTGGTTGACTGGATG+AGG 0.555535 1_3:+29663531 Msa0113640:CDS
GATCTCATATGCAACTGGCT+TGG 0.557985 1_3:+29663623 Msa0113640:CDS
ATGAGTAGGTAATTCAAGAT+GGG 0.559235 1_3:+29663754 Msa0113640:intron
ATTCCATCCTCAAGAAGGAT+AGG 0.559975 1_3:-29663572 None:intergenic
AATCGGTTCGGGATTCACTA+GGG 0.561324 1_3:+29663462 Msa0113640:CDS
TTACGTGGAACAAATATGGT+TGG 0.561904 1_3:+29660030 Msa0113640:five_prime_UTR
CGATTTACTCATTTATGCTG+GGG 0.564051 1_3:+29663595 Msa0113640:CDS
CATTAGATATGCTGAAGAAG+TGG 0.565310 1_3:+29664480 Msa0113640:CDS
AATCGATTCCATCCTCAAGA+AGG 0.566331 1_3:-29663577 None:intergenic
AGATTAATCAAGCAACAAAA+GGG 0.567647 1_3:-29664564 None:intergenic
GCGTTACTTACTTTGCAGCA+TGG 0.568460 1_3:-29659772 None:intergenic
TTAATCCTTTCAGGAACCGA+TGG 0.568592 1_3:+29662705 Msa0113640:intron
GTTCGGGATTCACTAGGGGT+TGG 0.569789 1_3:+29663467 Msa0113640:CDS
TGCGGGTCACATGGTTCCAA+TGG 0.570155 1_3:+29664442 Msa0113640:CDS
GGTCCATGATGCGGGTCACA+TGG 0.570682 1_3:+29664433 Msa0113640:intron
GTAGTCAGCAACACAGTGGC+AGG 0.572584 1_3:-29662088 None:intergenic
CAACAGGGTCGTCTTCCTTG+TGG 0.572959 1_3:-29659917 None:intergenic
GGGACCAGCTCGGTTGACTA+CGG 0.573013 1_3:+29664789 Msa0113640:three_prime_UTR
TATGCTGAAGAAGTGGACTC+GGG 0.574701 1_3:+29664487 Msa0113640:CDS
CGGATACGAGATCCTAAAGC+AGG 0.575255 1_3:-29661749 None:intergenic
CGTTTGAAACTTCCCGGTGT+GGG 0.576157 1_3:-29664660 None:intergenic
CAGGCAAGCAATCTTTCCAT+CGG 0.576371 1_3:-29662721 None:intergenic
TGCTGAATCCATAGCTGGTG+AGG 0.576450 1_3:+29664517 Msa0113640:CDS
CAGCAGACGAAGCGATGTTG+AGG 0.576714 1_3:-29659607 None:intergenic
GCCAATTCACTACTACAGCC+AGG 0.578085 1_3:-29659960 None:intergenic
CCATCTCCAGAGCATAATCT+GGG 0.580045 1_3:-29661950 None:intergenic
TAGCTAAAGCCAGTTCCAGT+TGG 0.580990 1_3:-29660544 None:intergenic
AGTCATCCTTAATCTTGAAA+GGG 0.582116 1_3:-29660001 None:intergenic
GATATCAGAAAGAAGTGTGA+GGG 0.585311 1_3:+29663392 Msa0113640:five_prime_UTR
CCGTTTGAAACTTCCCGGTG+TGG 0.586542 1_3:-29664661 None:intergenic
TACAGGCTACATTTGCACTC+AGG 0.586897 1_3:-29662740 None:intergenic
CACCAGCTATGGATTCAGCA+AGG 0.595684 1_3:-29664514 None:intergenic
CTTTGAATCACGCAACCACA+AGG 0.596723 1_3:+29659902 Msa0113640:five_prime_UTR
ATCAAATTCACAAACCGAGG+TGG 0.604413 1_3:-29664765 None:intergenic
GCTGGAATATTGAAGAGCTA+CGG 0.609644 1_3:+29663854 Msa0113640:CDS
ATTAGTAAGCCCATTACCAA+TGG 0.610329 1_3:-29661904 None:intergenic
GAATTTGATGGGGACCAGCT+CGG 0.617285 1_3:+29664779 Msa0113640:three_prime_UTR
GTTGTCATTTGGTTGACTGG+AGG 0.619240 1_3:+29659936 Msa0113640:five_prime_UTR
ACCAGCTATGGATTCAGCAA+GGG 0.619819 1_3:-29664513 None:intergenic
GAACAAATATGGTTGGGACA+AGG 0.622182 1_3:+29660037 Msa0113640:five_prime_UTR
TGGATGAGGAATCTTGAAGT+TGG 0.623331 1_3:+29663545 Msa0113640:CDS
GGAGATGGGCTTAATTACAA+AGG 0.623964 1_3:+29661965 Msa0113640:five_prime_UTR
ATCGGTTCGGGATTCACTAG+GGG 0.625822 1_3:+29663463 Msa0113640:CDS
TTAGGATCTCGTATCCGTCA+AGG 0.627475 1_3:+29661755 Msa0113640:five_prime_UTR
CCCATCAAATTCACAAACCG+AGG 0.629784 1_3:-29664768 None:intergenic
CAACGATCTTGCCACCACGA+TGG 0.630918 1_3:-29659646 None:intergenic
TGTAATATAAGTCCCACACC+GGG 0.634150 1_3:+29664648 Msa0113640:three_prime_UTR
CACACCGTAGTCAACCGAGC+TGG 0.635256 1_3:-29664793 None:intergenic
ATATCAGAAAGAAGTGTGAG+GGG 0.638294 1_3:+29663393 Msa0113640:five_prime_UTR
GTCAGCAACACAGTGGCAGG+TGG 0.639198 1_3:-29662085 None:intergenic
CTCCAGAGCATAATCTGGGT+AGG 0.642613 1_3:-29661946 None:intergenic
ATTAGGTTACGGAACTTGAG+GGG 0.642682 1_3:-29659674 None:intergenic
TTGTAATATAAGTCCCACAC+CGG 0.649613 1_3:+29664647 Msa0113640:three_prime_UTR
ATAGTGACCAAAATCATCAA+CGG 0.652528 1_3:-29659723 None:intergenic
TGATATCAGAAAGAAGTGTG+AGG 0.656459 1_3:+29663391 Msa0113640:five_prime_UTR
GAGACCTTCAGAAAATTCAG+AGG 0.657917 1_3:-29663878 None:intergenic
AGGATGACTTGTCTCTTACG+TGG 0.658153 1_3:+29660015 Msa0113640:five_prime_UTR
TCAATTTGTTCTGCATCGAG+CGG 0.660144 1_3:+29659518 Msa0113640:five_prime_UTR
TAACAACATAGGGAACATCA+GGG 0.666582 1_3:-29663820 None:intergenic
CACATTATATCATCTAAGAG+GGG 0.666915 1_3:-29664852 None:intergenic
ATGCTGAAGAAGTGGACTCG+GGG 0.674515 1_3:+29664488 Msa0113640:CDS
TCCAAACCAAAACCAAAATG+GGG 0.677176 1_3:+29659456 Msa0113640:five_prime_UTR
CAGTCAACCAAATGACAACA+GGG 0.680746 1_3:-29659932 None:intergenic
GCAAATTCATCTTCCCATCG+TGG 0.684202 1_3:+29659632 Msa0113640:five_prime_UTR
GACATCTTGTTACATGCTGG+AGG 0.685669 1_3:+29662777 Msa0113640:five_prime_UTR
AACATAGGGAACATCAGGGG+AGG 0.690237 1_3:-29663816 None:intergenic
AATTCATCTTCCCATCGTGG+TGG 0.704348 1_3:+29659635 Msa0113640:five_prime_UTR
AACAACATAGGGAACATCAG+GGG 0.717750 1_3:-29663819 None:intergenic
CAGCATGGGAATGTTGAATG+GGG 0.724539 1_3:-29659757 None:intergenic
GATCGTAGTCAGCAACACAG+TGG 0.753827 1_3:-29662092 None:intergenic
GAATTGGCAATAAAGCTATG+CGG 0.772207 1_3:+29662029 Msa0113640:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTTTTTTCTAAATATAAA+AGG - chr1_3:29660793-29660812 None:intergenic 10.0%
!! ATTAATTCAATTTCTTAATA+GGG + chr1_3:29661110-29661129 Msa0113640:intron 10.0%
!!! ATTTAAAGTAAAAAAATTAC+GGG + chr1_3:29661501-29661520 Msa0113640:intron 10.0%
!! AAATGATAAGAAAATATTTA+GGG - chr1_3:29662543-29662562 None:intergenic 10.0%
!! AAGGAATTTAAACATAATTA+GGG - chr1_3:29660774-29660793 None:intergenic 15.0%
!! AAAGGAATTTAAACATAATT+AGG - chr1_3:29660775-29660794 None:intergenic 15.0%
!!! AATCTGAAAATGAAATTTTT+TGG - chr1_3:29661004-29661023 None:intergenic 15.0%
!! CATTAATTCAATTTCTTAAT+AGG + chr1_3:29661109-29661128 Msa0113640:intron 15.0%
!!! ATATTATTCATTTTCAAGTT+TGG - chr1_3:29661143-29661162 None:intergenic 15.0%
!! ATGAATAATATCTACTTTAA+AGG + chr1_3:29661152-29661171 Msa0113640:intron 15.0%
!!! TTAGATTTGTTTAAAAATGA+AGG - chr1_3:29662516-29662535 None:intergenic 15.0%
!! GAAATGATAAGAAAATATTT+AGG - chr1_3:29662544-29662563 None:intergenic 15.0%
!!! GTTCTAATTAATCATTTTAT+CGG + chr1_3:29662977-29662996 Msa0113640:intron 15.0%
!!! TTCTAATTAATCATTTTATC+GGG + chr1_3:29662978-29662997 Msa0113640:intron 15.0%
!!! TTATAATCTTTTGAATAATG+AGG + chr1_3:29663700-29663719 Msa0113640:intron 15.0%
!!! AGATGTGAATTTTATAAACT+TGG + chr1_3:29659411-29659430 Msa0113640:five_prime_UTR 20.0%
!! ATGGAAAGAATTTGAATAAA+AGG - chr1_3:29659841-29659860 None:intergenic 20.0%
!!! CAACACATATAGTTTTATTA+TGG - chr1_3:29659860-29659879 None:intergenic 20.0%
!! AAAGAGAAAAATGTGAAATT+AGG - chr1_3:29660066-29660085 None:intergenic 20.0%
!!! TTTTAGTGCAATTTTAAAGA+TGG + chr1_3:29660679-29660698 Msa0113640:intron 20.0%
!! AATTTAAACATAATTAGGGA+AGG - chr1_3:29660770-29660789 None:intergenic 20.0%
!!! CTAAATACAGTGTTTTAATT+TGG + chr1_3:29660810-29660829 Msa0113640:intron 20.0%
!! ATAGACAAAAATAAGAAAAC+AGG - chr1_3:29661088-29661107 None:intergenic 20.0%
!!! GAAAATATTGTTTTTGAACT+TGG - chr1_3:29661181-29661200 None:intergenic 20.0%
!!! ACAACTTTTTTAATTTGTGT+AGG - chr1_3:29661470-29661489 None:intergenic 20.0%
!!! AAGAATGACTTTTTTATTAC+AGG + chr1_3:29661701-29661720 Msa0113640:five_prime_UTR 20.0%
!! AGGAATTCATATAAATTTGA+AGG + chr1_3:29661793-29661812 Msa0113640:five_prime_UTR 20.0%
!!! GAAACATTCTGATTTTATAT+AGG + chr1_3:29661839-29661858 Msa0113640:intron 20.0%
!!! TTATTTTTAATGGTTTGAAC+AGG + chr1_3:29661875-29661894 Msa0113640:intron 20.0%
!!! TATTTTTAATGGTTTGAACA+GGG + chr1_3:29661876-29661895 Msa0113640:intron 20.0%
!! ATTCTTTACAAGTATATAGT+TGG + chr1_3:29662163-29662182 Msa0113640:intron 20.0%
!!! ATTCAATTTTATATCCATTG+TGG - chr1_3:29662360-29662379 None:intergenic 20.0%
!! TCAAAAGAAAAAAGAAAAAC+AGG - chr1_3:29662595-29662614 None:intergenic 20.0%
!!! ATATTTGTTTTAATCCTTTC+AGG + chr1_3:29662696-29662715 Msa0113640:intron 20.0%
!!! AGGAGTTTTTTTAATTCAAT+AGG + chr1_3:29663132-29663151 Msa0113640:intron 20.0%
!! CTCTTAATTAAAAACTATTG+TGG - chr1_3:29663223-29663242 None:intergenic 20.0%
!!! CACAATAGTTTTTAATTAAG+AGG + chr1_3:29663221-29663240 Msa0113640:intron 20.0%
!! ATTGCAATTTCCATAAATAT+GGG - chr1_3:29663305-29663324 None:intergenic 20.0%
!! AATTGCAATTTCCATAAATA+TGG - chr1_3:29663306-29663325 None:intergenic 20.0%
!! AGATTAATTCCATATAGTAT+TGG - chr1_3:29663968-29663987 None:intergenic 20.0%
!!! AAACTATATGTGTTGTTTGT+AGG + chr1_3:29659865-29659884 Msa0113640:intron 25.0%
!!! ATGTTTTGAGTAAAATCGAA+AGG + chr1_3:29660102-29660121 Msa0113640:intron 25.0%
!!! TGTTTTGAGTAAAATCGAAA+GGG + chr1_3:29660103-29660122 Msa0113640:intron 25.0%
! AGCAAGTTTATACTATTATG+TGG + chr1_3:29660143-29660162 Msa0113640:intron 25.0%
!!! TTTTAAAACCATTATCTCCA+GGG - chr1_3:29660185-29660204 None:intergenic 25.0%
! CTGTCATAAATAATTATCAG+AGG - chr1_3:29660472-29660491 None:intergenic 25.0%
!!! AAATTTGTTGCCAATTTTGT+AGG + chr1_3:29660495-29660514 Msa0113640:intron 25.0%
! TGATATTCGTCATAATGAAA+AGG + chr1_3:29660582-29660601 Msa0113640:five_prime_UTR 25.0%
! GATATTCGTCATAATGAAAA+GGG + chr1_3:29660583-29660602 Msa0113640:five_prime_UTR 25.0%
! AAGGAAAATATAATTAGGGA+AGG - chr1_3:29660751-29660770 None:intergenic 25.0%
! AGGGAAGGAAAATATAATTA+GGG - chr1_3:29660755-29660774 None:intergenic 25.0%
! TAGGGAAGGAAAATATAATT+AGG - chr1_3:29660756-29660775 None:intergenic 25.0%
!!! ACAGTGTTTTAATTTGGTAA+AGG + chr1_3:29660816-29660835 Msa0113640:intron 25.0%
!!! ATTGTTTCTAACCTTTGAAA+TGG + chr1_3:29660886-29660905 Msa0113640:intron 25.0%
!!! TTGTTTCTAACCTTTGAAAT+GGG + chr1_3:29660887-29660906 Msa0113640:intron 25.0%
!! ATCATAATTTTCAACGAGTA+AGG + chr1_3:29661060-29661079 Msa0113640:intron 25.0%
! GTTATTGATCTTGAAAAAAC+TGG - chr1_3:29661214-29661233 None:intergenic 25.0%
! AGATATCTCAATATGACTAA+AGG - chr1_3:29661270-29661289 None:intergenic 25.0%
!! ATGTATGACCTTTGATTTAT+AGG - chr1_3:29661330-29661349 None:intergenic 25.0%
! AAAGTCATTCTTTGCATATT+GGG - chr1_3:29661693-29661712 None:intergenic 25.0%
! AAAAGTCATTCTTTGCATAT+TGG - chr1_3:29661694-29661713 None:intergenic 25.0%
! CCATTAAAAATAAGATACAC+TGG - chr1_3:29661868-29661887 None:intergenic 25.0%
!!! CCAGTGTATCTTATTTTTAA+TGG + chr1_3:29661865-29661884 Msa0113640:intron 25.0%
! ATATACATGTATGAGTGTTA+TGG - chr1_3:29662117-29662136 None:intergenic 25.0%
! TAAATCCGATTCTAAATCAT+TGG + chr1_3:29662203-29662222 Msa0113640:intron 25.0%
!! ACTTTCCAATGATTTAGAAT+CGG - chr1_3:29662211-29662230 None:intergenic 25.0%
! TTCATTTGCAATTTCAGTTA+TGG + chr1_3:29662239-29662258 Msa0113640:intron 25.0%
! CTTAAAGTTTACATGATCAT+TGG - chr1_3:29662298-29662317 None:intergenic 25.0%
! CAATGATCATGTAAACTTTA+AGG + chr1_3:29662296-29662315 Msa0113640:intron 25.0%
! TTGAATCATAAAACTACTGT+TGG + chr1_3:29662374-29662393 Msa0113640:intron 25.0%
!! AATGAATTTTGTTCAAAGCT+TGG - chr1_3:29662484-29662503 None:intergenic 25.0%
! GATTCTTGACAATTTAATTC+TGG - chr1_3:29662568-29662587 None:intergenic 25.0%
! TACAGTTTAAGCAATCTATT+TGG + chr1_3:29662917-29662936 Msa0113640:intron 25.0%
!! TTAATCATTTTATCGGGATT+TGG + chr1_3:29662984-29663003 Msa0113640:intron 25.0%
! AATTCAATAGGAATCAAACT+CGG + chr1_3:29663144-29663163 Msa0113640:intron 25.0%
!!! TGCAATTTTGAAGCAATATA+TGG + chr1_3:29663319-29663338 Msa0113640:intron 25.0%
!!! GCAATTTTGAAGCAATATAT+GGG + chr1_3:29663320-29663339 Msa0113640:intron 25.0%
! TGAAAACTACCAATACTATA+TGG + chr1_3:29663956-29663975 Msa0113640:intron 25.0%
!!! AGTGCTGATTAAAAAAAGTT+GGG - chr1_3:29664059-29664078 None:intergenic 25.0%
!!! TGTTTTTTCTGTTAAAGACT+CGG + chr1_3:29664179-29664198 Msa0113640:intron 25.0%
! TACTGAATGTTTATATTGTG+CGG + chr1_3:29664233-29664252 Msa0113640:intron 25.0%
! AGCAAGTTTATATTTGATCA+TGG - chr1_3:29664282-29664301 None:intergenic 25.0%
!! ATATATGAAGTGTCTATTTC+TGG - chr1_3:29664336-29664355 None:intergenic 25.0%
! AGATTAATCAAGCAACAAAA+GGG - chr1_3:29664567-29664586 None:intergenic 25.0%
! TAGATTAATCAAGCAACAAA+AGG - chr1_3:29664568-29664587 None:intergenic 25.0%
!!! CTCATATGTTATTTCTGATT+TGG + chr1_3:29664624-29664643 Msa0113640:three_prime_UTR 25.0%
!!! GATAGTAGTTTTATACATGT+CGG - chr1_3:29664710-29664729 None:intergenic 25.0%
! TAAAGAAACGAAAAAGTCAT+TGG - chr1_3:29664732-29664751 None:intergenic 25.0%
!!! TGAATACATTGTCTCTTTTT+TGG + chr1_3:29664814-29664833 Msa0113640:three_prime_UTR 25.0%
!!! GAATACATTGTCTCTTTTTT+GGG + chr1_3:29664815-29664834 Msa0113640:three_prime_UTR 25.0%
! TCACATTATATCATCTAAGA+GGG - chr1_3:29664856-29664875 None:intergenic 25.0%
! TTTGGAATCACACAAAAGAA+AGG - chr1_3:29659442-29659461 None:intergenic 30.0%
ATTCCAAACCAAAACCAAAA+TGG + chr1_3:29659454-29659473 Msa0113640:five_prime_UTR 30.0%
TTCCAAACCAAAACCAAAAT+GGG + chr1_3:29659455-29659474 Msa0113640:five_prime_UTR 30.0%
ATAGTGACCAAAATCATCAA+CGG - chr1_3:29659726-29659745 None:intergenic 30.0%
AAGAGAATCATATAGTAGGA+AGG - chr1_3:29659817-29659836 None:intergenic 30.0%
AGGAAAGAGAATCATATAGT+AGG - chr1_3:29659821-29659840 None:intergenic 30.0%
AGTCATCCTTAATCTTGAAA+GGG - chr1_3:29660004-29660023 None:intergenic 30.0%
AAGTCATCCTTAATCTTGAA+AGG - chr1_3:29660005-29660024 None:intergenic 30.0%
!! GTTTTGAGTAAAATCGAAAG+GGG + chr1_3:29660104-29660123 Msa0113640:intron 30.0%
!! TTTTGAGTAAAATCGAAAGG+GGG + chr1_3:29660105-29660124 Msa0113640:intron 30.0%
!!! GTTTTAAAACCATTATCTCC+AGG - chr1_3:29660186-29660205 None:intergenic 30.0%
TAAAGACACTCATGTCTTTA+AGG - chr1_3:29660394-29660413 None:intergenic 30.0%
TAAAGACATGAGTGTCTTTA+TGG + chr1_3:29660394-29660413 Msa0113640:intron 30.0%
AAAGACATGAGTGTCTTTAT+GGG + chr1_3:29660395-29660414 Msa0113640:intron 30.0%
! AGGTTTGAAACCTACAAAAT+TGG - chr1_3:29660508-29660527 None:intergenic 30.0%
TTGGTTGATCAACATACAAA+AGG - chr1_3:29660528-29660547 None:intergenic 30.0%
AATTAGGGAAGGAAAATAGT+GGG - chr1_3:29660740-29660759 None:intergenic 30.0%
TAATTAGGGAAGGAAAATAG+TGG - chr1_3:29660741-29660760 None:intergenic 30.0%
TACTCAAGTTTAAATCCCAA+TGG + chr1_3:29660853-29660872 Msa0113640:intron 30.0%
ACTCAAGTTTAAATCCCAAT+GGG + chr1_3:29660854-29660873 Msa0113640:intron 30.0%
!! TGTTTCTAACCTTTGAAATG+GGG + chr1_3:29660888-29660907 Msa0113640:intron 30.0%
ACTACCAAAATTACCAACAT+TGG - chr1_3:29660938-29660957 None:intergenic 30.0%
! TTGGTAGTCAAGTTATTCAT+AGG + chr1_3:29660950-29660969 Msa0113640:intron 30.0%
TGGTAGTCAAGTTATTCATA+GGG + chr1_3:29660951-29660970 Msa0113640:intron 30.0%
AAGTCATTCTTTGCATATTG+GGG - chr1_3:29661692-29661711 None:intergenic 30.0%
TATGAATTCCTTCATTAGCT+TGG - chr1_3:29661784-29661803 None:intergenic 30.0%
TATATAGTTGGCATAAAACG+TGG + chr1_3:29662175-29662194 Msa0113640:intron 30.0%
TCTCAATGTGATTTCATGTA+AGG - chr1_3:29662877-29662896 None:intergenic 30.0%
ATGAAATCACATTGAGAATG+AGG + chr1_3:29662880-29662899 Msa0113640:intron 30.0%
ATTAATTAGAACTCTCCATG+TGG - chr1_3:29662969-29662988 None:intergenic 30.0%
TCCATAAATATGGGTTTCTT+CGG - chr1_3:29663296-29663315 None:intergenic 30.0%
!! CTGCTATGATTTTTCAAACA+TGG + chr1_3:29663421-29663440 Msa0113640:exon 30.0%
AAAGTTTCTGAACCAAGAAT+CGG + chr1_3:29663445-29663464 Msa0113640:CDS 30.0%
! TTGTAGCACTGAAGTTTATA+TGG + chr1_3:29663508-29663527 Msa0113640:CDS 30.0%
TGAAGTTTATATGGCTATGT+TGG + chr1_3:29663517-29663536 Msa0113640:CDS 30.0%
! ATCGATTTACTCATTTATGC+TGG + chr1_3:29663593-29663612 Msa0113640:CDS 30.0%
TCGATTTACTCATTTATGCT+GGG + chr1_3:29663594-29663613 Msa0113640:CDS 30.0%
AATATGATCTCATATGCAAC+TGG + chr1_3:29663618-29663637 Msa0113640:CDS 30.0%
AATGAGTAGGTAATTCAAGA+TGG + chr1_3:29663753-29663772 Msa0113640:intron 30.0%
ATGAGTAGGTAATTCAAGAT+GGG + chr1_3:29663754-29663773 Msa0113640:intron 30.0%
TCTGATCCATTAACAACATA+GGG - chr1_3:29663833-29663852 None:intergenic 30.0%
TTCTGATCCATTAACAACAT+AGG - chr1_3:29663834-29663853 None:intergenic 30.0%
GGAATTAATCTCACTTTACA+TGG + chr1_3:29663977-29663996 Msa0113640:intron 30.0%
AAACTATAGATTGCCTTCTT+CGG + chr1_3:29664010-29664029 Msa0113640:intron 30.0%
! TGCTGATTAAAAAAAGTTGG+GGG - chr1_3:29664057-29664076 None:intergenic 30.0%
!! GTGCTGATTAAAAAAAGTTG+GGG - chr1_3:29664058-29664077 None:intergenic 30.0%
!! CAGTGCTGATTAAAAAAAGT+TGG - chr1_3:29664060-29664079 None:intergenic 30.0%
!!! CAACTTTTTTTAATCAGCAC+TGG + chr1_3:29664058-29664077 Msa0113640:intron 30.0%
TTGGATGCAATGTTGAAATT+GGG - chr1_3:29664123-29664142 None:intergenic 30.0%
TTTGGATGCAATGTTGAAAT+TGG - chr1_3:29664124-29664143 None:intergenic 30.0%
CATTGCATCCAAATCATTAA+CGG + chr1_3:29664131-29664150 Msa0113640:intron 30.0%
TATTGTCACCGTTAATGATT+TGG - chr1_3:29664142-29664161 None:intergenic 30.0%
!!! GTTTTTTCTGTTAAAGACTC+GGG + chr1_3:29664180-29664199 Msa0113640:intron 30.0%
ACTGAATGTTTATATTGTGC+GGG + chr1_3:29664234-29664253 Msa0113640:intron 30.0%
! AAGTACTGTGTGATAAAAAC+AGG + chr1_3:29664412-29664431 Msa0113640:intron 30.0%
TGCTTGATTAATCTAGCAAA+AGG + chr1_3:29664573-29664592 Msa0113640:three_prime_UTR 30.0%
AGGAAACAAAAATGAAAACC+AGG + chr1_3:29664593-29664612 Msa0113640:three_prime_UTR 30.0%
AAACAAAAATGAAAACCAGG+AGG + chr1_3:29664596-29664615 Msa0113640:three_prime_UTR 30.0%
! AATATTTTCTTTCTCCACCT+CGG + chr1_3:29664751-29664770 Msa0113640:three_prime_UTR 30.0%
CACATTATATCATCTAAGAG+GGG - chr1_3:29664855-29664874 None:intergenic 30.0%
GTCACATTATATCATCTAAG+AGG - chr1_3:29664857-29664876 None:intergenic 30.0%
!! AATGTGCTTTAAAGATCAAG+TGG - chr1_3:29664884-29664903 None:intergenic 30.0%
TCCAAACCAAAACCAAAATG+GGG + chr1_3:29659456-29659475 Msa0113640:five_prime_UTR 35.0%
! TTTTCTTCTTGTTCTGCATG+TGG + chr1_3:29659492-29659511 Msa0113640:five_prime_UTR 35.0%
AATTAGGTTACGGAACTTGA+GGG - chr1_3:29659678-29659697 None:intergenic 35.0%
AAATTAGGTTACGGAACTTG+AGG - chr1_3:29659679-29659698 None:intergenic 35.0%
CATCATCGGAAATTAGGTTA+CGG - chr1_3:29659688-29659707 None:intergenic 35.0%
AACATCATCGTCATCATCAT+CGG - chr1_3:29659702-29659721 None:intergenic 35.0%
!!! GATGTTTCCGTTGATGATTT+TGG + chr1_3:29659716-29659735 Msa0113640:five_prime_UTR 35.0%
GAATCATATAGTAGGAAGGA+AGG - chr1_3:29659813-29659832 None:intergenic 35.0%
!! TTGGCTTTGTTCTACGAAAA+TGG + chr1_3:29659978-29659997 Msa0113640:five_prime_UTR 35.0%
AAATGGCCCTTTCAAGATTA+AGG + chr1_3:29659995-29660014 Msa0113640:five_prime_UTR 35.0%
TCTCTTACGTGGAACAAATA+TGG + chr1_3:29660026-29660045 Msa0113640:five_prime_UTR 35.0%
TTACGTGGAACAAATATGGT+TGG + chr1_3:29660030-29660049 Msa0113640:five_prime_UTR 35.0%
TACGTGGAACAAATATGGTT+GGG + chr1_3:29660031-29660050 Msa0113640:five_prime_UTR 35.0%
TTTGAGTAAAATCGAAAGGG+GGG + chr1_3:29660106-29660125 Msa0113640:intron 35.0%
AAGACATGAGTGTCTTTATG+GGG + chr1_3:29660396-29660415 Msa0113640:intron 35.0%
AATACAGAAAGCAGTTGTCA+AGG - chr1_3:29660441-29660460 None:intergenic 35.0%
TTGTATGTTGATCAACCAAC+TGG + chr1_3:29660529-29660548 Msa0113640:five_prime_UTR 35.0%
!! TTGGCAAGTTGATAGTATAG+AGG - chr1_3:29660919-29660938 None:intergenic 35.0%
TACTATCAACTTGCCAATGT+TGG + chr1_3:29660922-29660941 Msa0113640:intron 35.0%
!!! CTTGCCAATGTTGGTAATTT+TGG + chr1_3:29660931-29660950 Msa0113640:intron 35.0%
GGTAGTCAAGTTATTCATAG+GGG + chr1_3:29660952-29660971 Msa0113640:intron 35.0%
GTAGTCAAGTTATTCATAGG+GGG + chr1_3:29660953-29660972 Msa0113640:intron 35.0%
GTCCAAGTCCTATAAATCAA+AGG + chr1_3:29661319-29661338 Msa0113640:intron 35.0%
! GACCTTTGATTTATAGGACT+TGG - chr1_3:29661324-29661343 None:intergenic 35.0%
ATTTGCAGAAAACTGGCATT+AGG + chr1_3:29661429-29661448 Msa0113640:intron 35.0%
TTTATCTCAGTAGAGTCGAA+CGG + chr1_3:29661558-29661577 Msa0113640:intron 35.0%
! TTTTTCTTTCTTTTTCCCCC+AGG + chr1_3:29661649-29661668 Msa0113640:intron 35.0%
ATTACAGGTGAATCATATGC+TGG + chr1_3:29661716-29661735 Msa0113640:five_prime_UTR 35.0%
TTAATGGTTTGAACAGGGAT+TGG + chr1_3:29661881-29661900 Msa0113640:intron 35.0%
ATTAGTAAGCCCATTACCAA+TGG - chr1_3:29661907-29661926 None:intergenic 35.0%
! TAGGCTTTATACTGAATTGC+AGG - chr1_3:29661930-29661949 None:intergenic 35.0%
!! TAGCTTTATTGCCAATTCAC+AGG - chr1_3:29662027-29662046 None:intergenic 35.0%
GAATTGGCAATAAAGCTATG+CGG + chr1_3:29662029-29662048 Msa0113640:five_prime_UTR 35.0%
CTTTACAAACAGAACCACAA+TGG + chr1_3:29662343-29662362 Msa0113640:intron 35.0%
ACTAATCGACAAACAAGAAG+AGG - chr1_3:29662402-29662421 None:intergenic 35.0%
GTTTAGAAGAGAAACAGGTT+TGG - chr1_3:29662618-29662637 None:intergenic 35.0%
!! CATTGGTTTAGAAGAGAAAC+AGG - chr1_3:29662623-29662642 None:intergenic 35.0%
AGGAGAAGATTCTTAACAAG+CGG - chr1_3:29662649-29662668 None:intergenic 35.0%
GTCACTGAAAATGAGATTAC+AGG - chr1_3:29662760-29662779 None:intergenic 35.0%
!!! TAGTACCTTTTTTGTGACAG+AGG + chr1_3:29662851-29662870 Msa0113640:intron 35.0%
CTAAAATACCGTATACCACA+TGG + chr1_3:29662951-29662970 Msa0113640:intron 35.0%
CAGAATGAGTACTTAGTGTT+GGG - chr1_3:29663032-29663051 None:intergenic 35.0%
TCAGAATGAGTACTTAGTGT+TGG - chr1_3:29663033-29663052 None:intergenic 35.0%
! TACAAAACAGACTTTGGGTT+TGG - chr1_3:29663070-29663089 None:intergenic 35.0%
GTGTGTACAAAACAGACTTT+GGG - chr1_3:29663075-29663094 None:intergenic 35.0%
!!! CAGCTGAGGATATTTTAATC+AGG + chr1_3:29663112-29663131 Msa0113640:intron 35.0%
! TGTGTGAGCATTGTAAATTC+CGG - chr1_3:29663175-29663194 None:intergenic 35.0%
TCCGAAGAAACCCATATTTA+TGG + chr1_3:29663292-29663311 Msa0113640:intron 35.0%
! TGATATCAGAAAGAAGTGTG+AGG + chr1_3:29663391-29663410 Msa0113640:five_prime_UTR 35.0%
! GATATCAGAAAGAAGTGTGA+GGG + chr1_3:29663392-29663411 Msa0113640:five_prime_UTR 35.0%
! ATATCAGAAAGAAGTGTGAG+GGG + chr1_3:29663393-29663412 Msa0113640:five_prime_UTR 35.0%
CGATTTACTCATTTATGCTG+GGG + chr1_3:29663595-29663614 Msa0113640:CDS 35.0%
ATGGTATGGTTTCAATGAGT+AGG + chr1_3:29663740-29663759 Msa0113640:intron 35.0%
TAACAACATAGGGAACATCA+GGG - chr1_3:29663823-29663842 None:intergenic 35.0%
TTAACAACATAGGGAACATC+AGG - chr1_3:29663824-29663843 None:intergenic 35.0%
GATGTTCCCTATGTTGTTAA+TGG + chr1_3:29663824-29663843 Msa0113640:CDS 35.0%
TCTCACTTTACATGGAAAAC+AGG + chr1_3:29663985-29664004 Msa0113640:intron 35.0%
CTCACTTTACATGGAAAACA+GGG + chr1_3:29663986-29664005 Msa0113640:intron 35.0%
!!! TTTTAATCAGCACTGGTAAC+AGG + chr1_3:29664065-29664084 Msa0113640:intron 35.0%
TGGATGCAATGTTGAAATTG+GGG - chr1_3:29664122-29664141 None:intergenic 35.0%
TAACGGTGACAATAGAAGAA+AGG + chr1_3:29664148-29664167 Msa0113640:intron 35.0%
TCGGGCAGAATGTTAAAATT+GGG + chr1_3:29664198-29664217 Msa0113640:intron 35.0%
ATAAAAACAGGTCCATGATG+CGG + chr1_3:29664424-29664443 Msa0113640:intron 35.0%
AGCATATCTAATGCAGCTTT+GGG - chr1_3:29664473-29664492 None:intergenic 35.0%
CATTAGATATGCTGAAGAAG+TGG + chr1_3:29664480-29664499 Msa0113640:CDS 35.0%
TTGTAATATAAGTCCCACAC+CGG + chr1_3:29664647-29664666 Msa0113640:three_prime_UTR 35.0%
! AAAAACCGTTTGAAACTTCC+CGG - chr1_3:29664669-29664688 None:intergenic 35.0%
!!! ACCCCATTTTGGTTTTGGTT+TGG - chr1_3:29659460-29659479 None:intergenic 40.0%
!!! GATTGACCCCATTTTGGTTT+TGG - chr1_3:29659465-29659484 None:intergenic 40.0%
! GAACAAGATTGACCCCATTT+TGG - chr1_3:29659471-29659490 None:intergenic 40.0%
! TCAATTTGTTCTGCATCGAG+CGG + chr1_3:29659518-29659537 Msa0113640:five_prime_UTR 40.0%
!! GAGAGACCTTAATTTGTTCC+CGG + chr1_3:29659577-29659596 Msa0113640:five_prime_UTR 40.0%
ATTAGGTTACGGAACTTGAG+GGG - chr1_3:29659677-29659696 None:intergenic 40.0%
CGTCATCATCATCGGAAATT+AGG - chr1_3:29659694-29659713 None:intergenic 40.0%
!! GATGATTTTGGTCACTATGC+TGG + chr1_3:29659728-29659747 Msa0113640:five_prime_UTR 40.0%
CGTTACTTACTTTGCAGCAT+GGG - chr1_3:29659774-29659793 None:intergenic 40.0%
CAGTCAACCAAATGACAACA+GGG - chr1_3:29659935-29659954 None:intergenic 40.0%
GAACAAATATGGTTGGGACA+AGG + chr1_3:29660037-29660056 Msa0113640:five_prime_UTR 40.0%
AAACCATTATCTCCAGGGAA+GGG - chr1_3:29660180-29660199 None:intergenic 40.0%
AAAACCATTATCTCCAGGGA+AGG - chr1_3:29660181-29660200 None:intergenic 40.0%
TGGTGTCTCATTGTCTTTAG+CGG + chr1_3:29660287-29660306 Msa0113640:intron 40.0%
!!! TCTTTAGCGGCTAGTTTTGA+AGG + chr1_3:29660300-29660319 Msa0113640:intron 40.0%
! TGACCTGTATGACTTTTTGC+AGG + chr1_3:29660615-29660634 Msa0113640:five_prime_UTR 40.0%
GTACCTGCAAAAAGTCATAC+AGG - chr1_3:29660621-29660640 None:intergenic 40.0%
TCAGATTCAAGAGCAAACAC+AGG - chr1_3:29660643-29660662 None:intergenic 40.0%
AGGTTAGAAACAATCCCTCT+AGG - chr1_3:29660880-29660899 None:intergenic 40.0%
GAGGTAAAACCCCATTTCAA+AGG - chr1_3:29660900-29660919 None:intergenic 40.0%
AGATCAATAACCACCAACTG+AGG + chr1_3:29661223-29661242 Msa0113640:intron 40.0%
!! CACTTTAAAACCTCAGTTGG+TGG - chr1_3:29661236-29661255 None:intergenic 40.0%
!!! CACCAACTGAGGTTTTAAAG+TGG + chr1_3:29661234-29661253 Msa0113640:intron 40.0%
!! GTCCACTTTAAAACCTCAGT+TGG - chr1_3:29661239-29661258 None:intergenic 40.0%
AAGATTCTTCAGAAGACCAG+AGG - chr1_3:29661378-29661397 None:intergenic 40.0%
AAATTCGAGCAGGTCTCATA+TGG - chr1_3:29661413-29661432 None:intergenic 40.0%
! AGTTTTCTGCAAATTCGAGC+AGG - chr1_3:29661423-29661442 None:intergenic 40.0%
TGCTCGAATTTGCAGAAAAC+TGG + chr1_3:29661422-29661441 Msa0113640:intron 40.0%
AAACACCTGAACCCACATTT+GGG - chr1_3:29661534-29661553 None:intergenic 40.0%
AAAACACCTGAACCCACATT+TGG - chr1_3:29661535-29661554 None:intergenic 40.0%
TTATCTCAGTAGAGTCGAAC+GGG + chr1_3:29661559-29661578 Msa0113640:intron 40.0%
GGACACTATATTCCTGCTTT+AGG + chr1_3:29661737-29661756 Msa0113640:five_prime_UTR 40.0%
! CATTAGCTTGGTTTCCTTGA+CGG - chr1_3:29661772-29661791 None:intergenic 40.0%
CAAGGAAACCAAGCTAATGA+AGG + chr1_3:29661773-29661792 Msa0113640:five_prime_UTR 40.0%
! GGAGATGGGCTTAATTACAA+AGG + chr1_3:29661965-29661984 Msa0113640:five_prime_UTR 40.0%
AAGGTTACACATGCACTTCT+TGG + chr1_3:29661984-29662003 Msa0113640:five_prime_UTR 40.0%
TTTATTGCCAATTCACAGGC+TGG - chr1_3:29662023-29662042 None:intergenic 40.0%
TTGCATTTGATGCATCCTGA+GGG + chr1_3:29662319-29662338 Msa0113640:intron 40.0%
TTCTGTTTGTAAAGTCCCTC+AGG - chr1_3:29662337-29662356 None:intergenic 40.0%
GGAGAAGATTCTTAACAAGC+GGG - chr1_3:29662648-29662667 None:intergenic 40.0%
! GCTTGTTAAGAATCTTCTCC+TGG + chr1_3:29662648-29662667 Msa0113640:intron 40.0%
GTTAAGAATCTTCTCCTGGT+TGG + chr1_3:29662652-29662671 Msa0113640:intron 40.0%
TTAATCCTTTCAGGAACCGA+TGG + chr1_3:29662705-29662724 Msa0113640:intron 40.0%
AGTGACATCTTGTTACATGC+TGG + chr1_3:29662774-29662793 Msa0113640:five_prime_UTR 40.0%
AGATGTCAACTACACAGAAG+AGG - chr1_3:29662828-29662847 None:intergenic 40.0%
TAAGGCCTCTGTCACAAAAA+AGG - chr1_3:29662859-29662878 None:intergenic 40.0%
AGAACTCTCCATGTGGTATA+CGG - chr1_3:29662962-29662981 None:intergenic 40.0%
GGTGTGTACAAAACAGACTT+TGG - chr1_3:29663076-29663095 None:intergenic 40.0%
AGCTGAGAAAGAGTTAAAGG+AGG - chr1_3:29663097-29663116 None:intergenic 40.0%
CTCAGCTGAGAAAGAGTTAA+AGG - chr1_3:29663100-29663119 None:intergenic 40.0%
CTTTAACTCTTTCTCAGCTG+AGG + chr1_3:29663098-29663117 Msa0113640:intron 40.0%
! TGTGAGCATTGTAAATTCCG+GGG - chr1_3:29663173-29663192 None:intergenic 40.0%
! GTGTGAGCATTGTAAATTCC+GGG - chr1_3:29663174-29663193 None:intergenic 40.0%
! TTCAATGCTGCTTCGATGAT+AGG + chr1_3:29663269-29663288 Msa0113640:intron 40.0%
TTCTGAACCAAGAATCGGTT+CGG + chr1_3:29663450-29663469 Msa0113640:CDS 40.0%
! ATATGGCTATGTTGGTTGAC+TGG + chr1_3:29663525-29663544 Msa0113640:CDS 40.0%
TGGATGAGGAATCTTGAAGT+TGG + chr1_3:29663545-29663564 Msa0113640:CDS 40.0%
TGGTATTCCTATCCTTCTTG+AGG + chr1_3:29663565-29663584 Msa0113640:CDS 40.0%
ATTCCTATCCTTCTTGAGGA+TGG + chr1_3:29663569-29663588 Msa0113640:CDS 40.0%
ATTCCATCCTCAAGAAGGAT+AGG - chr1_3:29663575-29663594 None:intergenic 40.0%
! AATCGATTCCATCCTCAAGA+AGG - chr1_3:29663580-29663599 None:intergenic 40.0%
! TGTACCTTTTCCTCATGGTA+TGG + chr1_3:29663726-29663745 Msa0113640:intron 40.0%
GAAACCATACCATGAGGAAA+AGG - chr1_3:29663733-29663752 None:intergenic 40.0%
CTCATTGAAACCATACCATG+AGG - chr1_3:29663739-29663758 None:intergenic 40.0%
GGCTACAAATTCTTTCTGAC+CGG - chr1_3:29663798-29663817 None:intergenic 40.0%
AACAACATAGGGAACATCAG+GGG - chr1_3:29663822-29663841 None:intergenic 40.0%
! GTTGTTAATGGATCAGAAGC+TGG + chr1_3:29663836-29663855 Msa0113640:CDS 40.0%
GCTGGAATATTGAAGAGCTA+CGG + chr1_3:29663854-29663873 Msa0113640:CDS 40.0%
GAGACCTTCAGAAAATTCAG+AGG - chr1_3:29663881-29663900 None:intergenic 40.0%
!!! AAAAGTTGGGGGTATTTTGC+AGG - chr1_3:29664046-29664065 None:intergenic 40.0%
CTCGGGCAGAATGTTAAAAT+TGG + chr1_3:29664197-29664216 Msa0113640:intron 40.0%
TAAAAACAGGTCCATGATGC+GGG + chr1_3:29664425-29664444 Msa0113640:intron 40.0%
CAGCATATCTAATGCAGCTT+TGG - chr1_3:29664474-29664493 None:intergenic 40.0%
! ATATGCTGAAGAAGTGGACT+CGG + chr1_3:29664486-29664505 Msa0113640:CDS 40.0%
! CAATTTTTCCTCACCAGCTA+TGG - chr1_3:29664528-29664547 None:intergenic 40.0%
CATAGCTGGTGAGGAAAAAT+TGG + chr1_3:29664526-29664545 Msa0113640:CDS 40.0%
TGTAATATAAGTCCCACACC+GGG + chr1_3:29664648-29664667 Msa0113640:three_prime_UTR 40.0%
TATACATGTCGGACGAGTTT+AGG - chr1_3:29664699-29664718 None:intergenic 40.0%
ATCAAATTCACAAACCGAGG+TGG - chr1_3:29664768-29664787 None:intergenic 40.0%
! ACCTCGGTTTGTGAATTTGA+TGG + chr1_3:29664767-29664786 Msa0113640:three_prime_UTR 40.0%
! CCTCGGTTTGTGAATTTGAT+GGG + chr1_3:29664768-29664787 Msa0113640:three_prime_UTR 40.0%
! CTCGGTTTGTGAATTTGATG+GGG + chr1_3:29664769-29664788 Msa0113640:three_prime_UTR 40.0%
TGACGTCCGGGAACAAATTA+AGG - chr1_3:29659586-29659605 None:intergenic 45.0%
GCAAATTCATCTTCCCATCG+TGG + chr1_3:29659632-29659651 Msa0113640:five_prime_UTR 45.0%
AATTCATCTTCCCATCGTGG+TGG + chr1_3:29659635-29659654 Msa0113640:five_prime_UTR 45.0%
CAGCATGGGAATGTTGAATG+GGG - chr1_3:29659760-29659779 None:intergenic 45.0%
GCAGCATGGGAATGTTGAAT+GGG - chr1_3:29659761-29659780 None:intergenic 45.0%
TGCAGCATGGGAATGTTGAA+TGG - chr1_3:29659762-29659781 None:intergenic 45.0%
GCGTTACTTACTTTGCAGCA+TGG - chr1_3:29659775-29659794 None:intergenic 45.0%
CTTTGAATCACGCAACCACA+AGG + chr1_3:29659902-29659921 Msa0113640:five_prime_UTR 45.0%
AAGACGACCCTGTTGTCATT+TGG + chr1_3:29659925-29659944 Msa0113640:five_prime_UTR 45.0%
CCAGTCAACCAAATGACAAC+AGG - chr1_3:29659936-29659955 None:intergenic 45.0%
! CCTGTTGTCATTTGGTTGAC+TGG + chr1_3:29659933-29659952 Msa0113640:five_prime_UTR 45.0%
! GTTGTCATTTGGTTGACTGG+AGG + chr1_3:29659936-29659955 Msa0113640:five_prime_UTR 45.0%
ACCTGGCTGTAGTAGTGAAT+TGG + chr1_3:29659959-29659978 Msa0113640:five_prime_UTR 45.0%
! AGGATGACTTGTCTCTTACG+TGG + chr1_3:29660015-29660034 Msa0113640:five_prime_UTR 45.0%
AACCATTATCTCCAGGGAAG+GGG - chr1_3:29660179-29660198 None:intergenic 45.0%
GTTGATCAACCAACTGGAAC+TGG + chr1_3:29660535-29660554 Msa0113640:five_prime_UTR 45.0%
TAGCTAAAGCCAGTTCCAGT+TGG - chr1_3:29660547-29660566 None:intergenic 45.0%
! TAGGGAAGGAAAATAGTGGG+TGG - chr1_3:29660737-29660756 None:intergenic 45.0%
TTAAATCCCAATGGGCCTAG+AGG + chr1_3:29660862-29660881 Msa0113640:intron 45.0%
TAAATCCCAATGGGCCTAGA+GGG + chr1_3:29660863-29660882 Msa0113640:intron 45.0%
CACATAGATCTACGAACCTC+TGG + chr1_3:29661359-29661378 Msa0113640:intron 45.0%
TCATACCCAAATGTGGGTTC+AGG + chr1_3:29661526-29661545 Msa0113640:intron 45.0%
TTAGGATCTCGTATCCGTCA+AGG + chr1_3:29661755-29661774 Msa0113640:five_prime_UTR 45.0%
!! TTTGAACAGGGATTGGCCAT+TGG + chr1_3:29661888-29661907 Msa0113640:intron 45.0%
!! AGGGATTGGCCATTGGTAAT+GGG + chr1_3:29661895-29661914 Msa0113640:intron 45.0%
CCATCTCCAGAGCATAATCT+GGG - chr1_3:29661953-29661972 None:intergenic 45.0%
!! CCAGATTATGCTCTGGAGAT+GGG + chr1_3:29661951-29661970 Msa0113640:five_prime_UTR 45.0%
TGCACTTCTTGGCAAAGTGT+TGG + chr1_3:29661995-29662014 Msa0113640:five_prime_UTR 45.0%
GTTGCATTTGATGCATCCTG+AGG + chr1_3:29662318-29662337 Msa0113640:intron 45.0%
! TTCTTAACAAGCGGGAGCAT+TGG - chr1_3:29662640-29662659 None:intergenic 45.0%
AAATGTACCAGAAGCCAACC+AGG - chr1_3:29662669-29662688 None:intergenic 45.0%
!! TCTTTCCATCGGTTCCTGAA+AGG - chr1_3:29662713-29662732 None:intergenic 45.0%
CAGGCAAGCAATCTTTCCAT+CGG - chr1_3:29662724-29662743 None:intergenic 45.0%
TACAGGCTACATTTGCACTC+AGG - chr1_3:29662743-29662762 None:intergenic 45.0%
GACATCTTGTTACATGCTGG+AGG + chr1_3:29662777-29662796 Msa0113640:five_prime_UTR 45.0%
TGTCAACTACACAGAAGAGG+AGG - chr1_3:29662825-29662844 None:intergenic 45.0%
! GTGAGCATTGTAAATTCCGG+GGG - chr1_3:29663172-29663191 None:intergenic 45.0%
! TCTGAACCAAGAATCGGTTC+GGG + chr1_3:29663451-29663470 Msa0113640:CDS 45.0%
!! AATCGGTTCGGGATTCACTA+GGG + chr1_3:29663462-29663481 Msa0113640:CDS 45.0%
! CTATGTTGGTTGACTGGATG+AGG + chr1_3:29663531-29663550 Msa0113640:CDS 45.0%
GATCTCATATGCAACTGGCT+TGG + chr1_3:29663623-29663642 Msa0113640:CDS 45.0%
! GGTGATGTACCTTTTCCTCA+TGG + chr1_3:29663721-29663740 Msa0113640:intron 45.0%
! GATGGGTTCATGCCATGAAA+TGG + chr1_3:29663771-29663790 Msa0113640:CDS 45.0%
GTTCATGCCATGAAATGGTC+CGG + chr1_3:29663776-29663795 Msa0113640:CDS 45.0%
TTTCTGACCGGACCATTTCA+TGG - chr1_3:29663786-29663805 None:intergenic 45.0%
! CGGTCCTCTGAATTTTCTGA+AGG + chr1_3:29663874-29663893 Msa0113640:CDS 45.0%
AGGTAGAGTTATGCCGAAGA+AGG - chr1_3:29664026-29664045 None:intergenic 45.0%
!! TATCTAATGCAGCTTTGGGC+TGG - chr1_3:29664469-29664488 None:intergenic 45.0%
! TATGCTGAAGAAGTGGACTC+GGG + chr1_3:29664487-29664506 Msa0113640:CDS 45.0%
ACCAGCTATGGATTCAGCAA+GGG - chr1_3:29664516-29664535 None:intergenic 45.0%
AACATATGAGTACAGCCTCC+TGG - chr1_3:29664614-29664633 None:intergenic 45.0%
CCCATCAAATTCACAAACCG+AGG - chr1_3:29664771-29664790 None:intergenic 45.0%
!!! TAAATTTTCAAATAATTAAA+AGG + chr1_3:29661036-29661055 Msa0113640:intron 5.0%
!!! AATTTAAAGTAAAAAAATTA+CGG + chr1_3:29661500-29661519 Msa0113640:intron 5.0%
! CGATTTTGGACTGAAGCTCG+AGG + chr1_3:29659541-29659560 Msa0113640:five_prime_UTR 50.0%
AACGATCTTGCCACCACGAT+GGG - chr1_3:29659648-29659667 None:intergenic 50.0%
ATTTGGTTGACTGGAGGACC+TGG + chr1_3:29659942-29659961 Msa0113640:five_prime_UTR 50.0%
GCCAATTCACTACTACAGCC+AGG - chr1_3:29659963-29659982 None:intergenic 50.0%
AATCGAAAGGGGGGATGTTC+AGG + chr1_3:29660115-29660134 Msa0113640:intron 50.0%
ATTATCTCCAGGGAAGGGGA+AGG - chr1_3:29660175-29660194 None:intergenic 50.0%
TTCCCCTTCCCTGGAGATAA+TGG + chr1_3:29660174-29660193 Msa0113640:intron 50.0%
CACCACTGTGAGCACTAACA+CGG - chr1_3:29660272-29660291 None:intergenic 50.0%
ACAATCCCTCTAGGCCCATT+GGG - chr1_3:29660871-29660890 None:intergenic 50.0%
AACAATCCCTCTAGGCCCAT+TGG - chr1_3:29660872-29660891 None:intergenic 50.0%
ACGGGCTTCATACCCAAATG+TGG + chr1_3:29661519-29661538 Msa0113640:intron 50.0%
CGGGCTTCATACCCAAATGT+GGG + chr1_3:29661520-29661539 Msa0113640:intron 50.0%
ATGCTCTGCAAAGAAGGCCT+GGG - chr1_3:29661669-29661688 None:intergenic 50.0%
TTGGGGATGCTCTGCAAAGA+AGG - chr1_3:29661675-29661694 None:intergenic 50.0%
CGGATACGAGATCCTAAAGC+AGG - chr1_3:29661752-29661771 None:intergenic 50.0%
!! CAGGGATTGGCCATTGGTAA+TGG + chr1_3:29661894-29661913 Msa0113640:intron 50.0%
AGCCTACCCAGATTATGCTC+TGG + chr1_3:29661944-29661963 Msa0113640:five_prime_UTR 50.0%
CTCCAGAGCATAATCTGGGT+AGG - chr1_3:29661949-29661968 None:intergenic 50.0%
!! CCCAGATTATGCTCTGGAGA+TGG + chr1_3:29661950-29661969 Msa0113640:five_prime_UTR 50.0%
CCCATCTCCAGAGCATAATC+TGG - chr1_3:29661954-29661973 None:intergenic 50.0%
! GTTGGTTCCAGCCTGTGAAT+TGG + chr1_3:29662013-29662032 Msa0113640:five_prime_UTR 50.0%
GATCGTAGTCAGCAACACAG+TGG - chr1_3:29662095-29662114 None:intergenic 50.0%
!! ATCTTCTCCTGGTTGGCTTC+TGG + chr1_3:29662659-29662678 Msa0113640:intron 50.0%
! GTGAATCCCGAACCGATTCT+TGG - chr1_3:29663460-29663479 None:intergenic 50.0%
!! GAATCGGTTCGGGATTCACT+AGG + chr1_3:29663461-29663480 Msa0113640:CDS 50.0%
!! ATCGGTTCGGGATTCACTAG+GGG + chr1_3:29663463-29663482 Msa0113640:CDS 50.0%
AACATAGGGAACATCAGGGG+AGG - chr1_3:29663819-29663838 None:intergenic 50.0%
! ATGCTGAAGAAGTGGACTCG+GGG + chr1_3:29664488-29664507 Msa0113640:CDS 50.0%
ACCCTTGCTGAATCCATAGC+TGG + chr1_3:29664512-29664531 Msa0113640:CDS 50.0%
CACCAGCTATGGATTCAGCA+AGG - chr1_3:29664517-29664536 None:intergenic 50.0%
TGCTGAATCCATAGCTGGTG+AGG + chr1_3:29664517-29664536 Msa0113640:CDS 50.0%
! CGTTTGAAACTTCCCGGTGT+GGG - chr1_3:29664663-29664682 None:intergenic 50.0%
CCACACCGGGAAGTTTCAAA+CGG + chr1_3:29664661-29664680 Msa0113640:three_prime_UTR 50.0%
GAATTTGATGGGGACCAGCT+CGG + chr1_3:29664779-29664798 Msa0113640:three_prime_UTR 50.0%
! TCTGCATCGAGCGGCGATTT+TGG + chr1_3:29659527-29659546 Msa0113640:five_prime_UTR 55.0%
CGATGTTGAGGTTGACGTCC+GGG - chr1_3:29659598-29659617 None:intergenic 55.0%
GCGATGTTGAGGTTGACGTC+CGG - chr1_3:29659599-29659618 None:intergenic 55.0%
CAGCAGACGAAGCGATGTTG+AGG - chr1_3:29659610-29659629 None:intergenic 55.0%
CAACGATCTTGCCACCACGA+TGG - chr1_3:29659649-29659668 None:intergenic 55.0%
CAACAGGGTCGTCTTCCTTG+TGG - chr1_3:29659920-29659939 None:intergenic 55.0%
TGCCGTGTTAGTGCTCACAG+TGG + chr1_3:29660267-29660286 Msa0113640:intron 55.0%
TGCTCTGCAAAGAAGGCCTG+GGG - chr1_3:29661668-29661687 None:intergenic 55.0%
GATGCTCTGCAAAGAAGGCC+TGG - chr1_3:29661670-29661689 None:intergenic 55.0%
GTAGTCAGCAACACAGTGGC+AGG - chr1_3:29662091-29662110 None:intergenic 55.0%
GGAATCAAACTCGGTACCCC+CGG + chr1_3:29663153-29663172 Msa0113640:intron 55.0%
GTTCGGGATTCACTAGGGGT+TGG + chr1_3:29663467-29663486 Msa0113640:CDS 55.0%
GAACCATGTGACCCGCATCA+TGG - chr1_3:29664439-29664458 None:intergenic 55.0%
TGCGGGTCACATGGTTCCAA+TGG + chr1_3:29664442-29664461 Msa0113640:CDS 55.0%
! CCGTTTGAAACTTCCCGGTG+TGG - chr1_3:29664664-29664683 None:intergenic 55.0%
GACATGACCTTCCCCTTCCC+TGG + chr1_3:29660165-29660184 Msa0113640:intron 60.0%
GCTCTGCAAAGAAGGCCTGG+GGG - chr1_3:29661667-29661686 None:intergenic 60.0%
GTCAGCAACACAGTGGCAGG+TGG - chr1_3:29662088-29662107 None:intergenic 60.0%
GGTCCATGATGCGGGTCACA+TGG + chr1_3:29664433-29664452 Msa0113640:intron 60.0%
!! GCAGCTTTGGGCTGGTCCAT+TGG - chr1_3:29664461-29664480 None:intergenic 60.0%
GGGACCAGCTCGGTTGACTA+CGG + chr1_3:29664789-29664808 Msa0113640:three_prime_UTR 60.0%
CACACCGTAGTCAACCGAGC+TGG - chr1_3:29664796-29664815 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 29659379 29664922 29659379 ID=Msa0113640;Name=Msa0113640
chr1_3 mRNA 29659379 29664922 29659379 ID=Msa0113640-mRNA-1;Parent=Msa0113640;Name=Msa0113640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=1218|1|1|1|0.87|0.88|9|360|155
chr1_3 exon 29659379 29659783 29659379 ID=Msa0113640-mRNA-1:exon:9817;Parent=Msa0113640-mRNA-1
chr1_3 exon 29659887 29660058 29659887 ID=Msa0113640-mRNA-1:exon:9818;Parent=Msa0113640-mRNA-1
chr1_3 exon 29660517 29660636 29660517 ID=Msa0113640-mRNA-1:exon:9819;Parent=Msa0113640-mRNA-1
chr1_3 exon 29661671 29661814 29661671 ID=Msa0113640-mRNA-1:exon:9820;Parent=Msa0113640-mRNA-1
chr1_3 exon 29661897 29662130 29661897 ID=Msa0113640-mRNA-1:exon:9821;Parent=Msa0113640-mRNA-1
chr1_3 exon 29662718 29662806 29662718 ID=Msa0113640-mRNA-1:exon:9822;Parent=Msa0113640-mRNA-1
chr1_3 exon 29663386 29663644 29663386 ID=Msa0113640-mRNA-1:exon:9823;Parent=Msa0113640-mRNA-1
chr1_3 exon 29663762 29663895 29663762 ID=Msa0113640-mRNA-1:exon:9824;Parent=Msa0113640-mRNA-1
chr1_3 exon 29664434 29664922 29664434 ID=Msa0113640-mRNA-1:exon:9825;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29659379 29659783 29659379 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29659887 29660058 29659887 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29660517 29660636 29660517 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29661671 29661814 29661671 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29661897 29662130 29661897 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29662718 29662806 29662718 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 five_prime_UTR 29663386 29663439 29663386 ID=Msa0113640-mRNA-1:five_prime_utr;Parent=Msa0113640-mRNA-1
chr1_3 CDS 29663440 29663644 29663440 ID=Msa0113640-mRNA-1:cds;Parent=Msa0113640-mRNA-1
chr1_3 CDS 29663762 29663895 29663762 ID=Msa0113640-mRNA-1:cds;Parent=Msa0113640-mRNA-1
chr1_3 CDS 29664434 29664562 29664434 ID=Msa0113640-mRNA-1:cds;Parent=Msa0113640-mRNA-1
chr1_3 three_prime_UTR 29664563 29664922 29664563 ID=Msa0113640-mRNA-1:three_prime_utr;Parent=Msa0113640-mRNA-1
Gene Sequence

>Msa0113640

ATGGAAAAGTTTCTGAACCAAGAATCGGTTCGGGATTCACTAGGGGTTGGCAAAATTCGTTTTGTTTCTTGTAGCACTGAAGTTTATATGGCTATGTTGGTTGACTGGATGAGGAATCTTGAAGTTGGTATTCCTATCCTTCTTGAGGATGGAATCGATTTACTCATTTATGCTGGGGAATATGATCTCATATGCAACTGGCTTGGTAATTCAAGATGGGTTCATGCCATGAAATGGTCCGGTCAGAAAGAATTTGTAGCCTCCCCTGATGTTCCCTATGTTGTTAATGGATCAGAAGCTGGAATATTGAAGAGCTACGGTCCTCTGAATTTTCTGAAGGTCCATGATGCGGGTCACATGGTTCCAATGGACCAGCCCAAAGCTGCATTAGATATGCTGAAGAAGTGGACTCGGGGAACCCTTGCTGAATCCATAGCTGGTGAGGAAAAATTGGTTGCTGACATGTGA
Protein sequence

>Msa0113640

MEKFLNQESVRDSLGVGKIRFVSCSTEVYMAMLVDWMRNLEVGIPILLEDGIDLLIYAGEYDLICNWLGNSRWVHAMKWSGQKEFVASPDVPYVVNGSEAGILKSYGPLNFLKVHDAGHMVPMDQPKAALDMLKKWTRGTLAESIAGEEKLVADM*