AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0909720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0909720 MtrunA17_Chr1g0212361 95.322 791 9 3 1 787 1 767 0.0 1538
Msa0909720 MtrunA17_Chr8g0374081 30.982 723 447 21 98 781 75 784 3.15e-87 293
Msa0909720 MtrunA17_Chr5g0420581 30.162 431 263 11 330 728 2 426 1.23e-54 194
Msa0909720 MtrunA17_Chr3g0143651 25.478 785 455 26 58 781 7 722 1.18e-53 198
Msa0909720 MtrunA17_Chr1g0157311 35.517 290 166 5 509 781 497 782 1.11e-44 172
Msa0909720 MtrunA17_Chr1g0157291 46.875 160 83 2 509 667 8 166 6.79e-42 150
Msa0909720 MtrunA17_Chr5g0420571 30.502 259 163 5 80 335 76 320 1.34e-30 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0909720 AT1G50380.2 73.541 737 168 2 47 783 62 771 0.0 1156
Msa0909720 AT1G50380.1 74.550 723 160 1 61 783 7 705 0.0 1154
Msa0909720 AT1G69020.2 30.196 765 479 15 61 786 40 788 2.55e-108 349
Msa0909720 AT1G69020.1 30.105 764 449 16 61 786 40 756 9.79e-104 336
Msa0909720 AT5G66960.1 28.649 733 454 19 98 781 78 790 1.37e-73 256
Msa0909720 AT1G76140.1 26.227 774 461 23 62 784 78 792 2.21e-52 196
Msa0909720 AT1G76140.2 26.200 771 462 23 62 784 78 789 2.62e-52 196
Msa0909720 AT1G20380.1 24.936 778 488 25 51 784 3 728 5.94e-49 185
Msa0909720 AT1G20380.2 33.793 290 171 5 512 784 281 566 7.91e-43 164

Find 193 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTACTAACTTGTTATT+TGG 0.087936 6_2:-12764505 None:intergenic
TCAGATCCATTACTACTTTA+TGG 0.129739 6_2:+12766803 Msa0909720:CDS
AAGGAAAGACTTTGCATAAA+TGG 0.175876 6_2:+12767545 Msa0909720:CDS
GTTACATTGCCATCAATTTC+AGG 0.200205 6_2:+12770549 Msa0909720:three_prime_UTR
AAGGACCCACGCTTTGTTAA+TGG 0.235075 6_2:+12770653 Msa0909720:three_prime_UTR
CTTGTTACAGCTGGATTAAA+TGG 0.255776 6_2:+12769208 Msa0909720:CDS
TTTCTTTAGTGTGAAAATTC+AGG 0.259077 6_2:+12766163 Msa0909720:intron
TCCTCCGGAGCATGTTATTT+TGG 0.279354 6_2:+12764319 Msa0909720:CDS
ATGCTACTAACTTGTTATTT+GGG 0.325588 6_2:-12764504 None:intergenic
AACGCGGCGGTGGTGGAAAA+AGG 0.330472 6_2:-12762939 None:intergenic
CTTCACAGCATCCACACTTT+AGG 0.339268 6_2:-12770424 None:intergenic
TGCATAAATGGCAGAAGTGC+TGG 0.343823 6_2:+12767557 Msa0909720:CDS
AGTATATATTTCATCTCCTT+TGG 0.347787 6_2:-12764539 None:intergenic
TTATTCAAGGCTGCTGTTGC+CGG 0.348454 6_2:+12767620 Msa0909720:CDS
AAGCCTTGATGACTTGAAAC+TGG 0.362460 6_2:-12767360 None:intergenic
TTTGTTCTTACATTATCAAC+AGG 0.370728 6_2:-12769025 None:intergenic
TCCTATTGTTCTCAGGTTCT+CGG 0.373350 6_2:+12766668 Msa0909720:CDS
CATTAACAGATGGAACCTTT+TGG 0.374692 6_2:-12764271 None:intergenic
AAACAAATATTTCTTGTTCT+CGG 0.375239 6_2:-12765483 None:intergenic
GTTGCATATGAGAGAGAAAA+TGG 0.377111 6_2:+12766212 Msa0909720:CDS
TCCTCCTCCGGTGGCGAAGA+AGG 0.381536 6_2:+12763028 Msa0909720:CDS
CATTGAGTATATGGCAATAA+AGG 0.386482 6_2:+12770634 Msa0909720:three_prime_UTR
TAGTCATGTTTAGAGTCTTT+AGG 0.391930 6_2:-12770380 None:intergenic
GAAATATTTGTTTGTTGCAT+CGG 0.392351 6_2:+12765493 Msa0909720:CDS
GACTAATCATCTTTAGTCTT+GGG 0.397517 6_2:+12770398 Msa0909720:exon
ATTTGTCTCCTATTGTTCTC+AGG 0.397926 6_2:+12766661 Msa0909720:CDS
GAAGAATCCACATAGTATAC+TGG 0.404464 6_2:-12766323 None:intergenic
ATACGCGGAGGTGGTGAAAT+GGG 0.407509 6_2:+12767422 Msa0909720:CDS
TTTAAGACCTTCTTCAGGCT+TGG 0.409306 6_2:-12765555 None:intergenic
ATGTAGATTTGAGAAACTTC+AGG 0.410218 6_2:+12770332 Msa0909720:intron
GGGAGGCAGTGGTATGAGAA+TGG 0.419208 6_2:+12767443 Msa0909720:CDS
TGAGATAAAAGGAAGGATAA+AGG 0.422851 6_2:+12764142 Msa0909720:CDS
AGGAGAATTCCCACCTTGTC+AGG 0.423174 6_2:-12764685 None:intergenic
ATTTATGCAAAGTCTTTCCT+TGG 0.424710 6_2:-12767543 None:intergenic
CCACATATTCTTGTTACAGC+TGG 0.425203 6_2:+12769199 Msa0909720:CDS
TGCTCGACCTTCTTCGCCAC+CGG 0.425802 6_2:-12763035 None:intergenic
CTGACAAGAGGCTCTCCAAT+TGG 0.430484 6_2:-12764592 None:intergenic
TACAGGACCTGATGCTCCTC+CGG 0.432220 6_2:+12764304 Msa0909720:CDS
CGGAGATAGGAAAGCACATC+GGG 0.432650 6_2:-12763128 None:intergenic
GATAAAGGAGGAAGATATAT+CGG 0.433161 6_2:+12764157 Msa0909720:CDS
TCTTGTTCTCGGAAGCTTCA+AGG 0.434998 6_2:-12765472 None:intergenic
TTCTTATTCCCCACAGAGAA+AGG 0.435804 6_2:+12765717 Msa0909720:CDS
GAAGAAGGTCGAGCACAAAA+TGG 0.436268 6_2:+12763043 Msa0909720:CDS
ACATGCTCCGGAGGAGCATC+AGG 0.436439 6_2:-12764311 None:intergenic
AGGAAGAGAAAGAGTGAGGA+CGG 0.436466 6_2:-12762919 None:intergenic
GTGAGAGAACGCGGCGGTGG+TGG 0.438627 6_2:-12762946 None:intergenic
TGACTAATCATCTTTAGTCT+TGG 0.440202 6_2:+12770397 Msa0909720:exon
GTGTAACATCAAACCTTGAA+TGG 0.441077 6_2:+12764614 Msa0909720:CDS
TAGGAAAGTCCTGAAATTGA+TGG 0.442634 6_2:-12770558 None:intergenic
ACCTTCTTCGCCACCGGAGG+AGG 0.442989 6_2:-12763029 None:intergenic
TCATTCTCCGCTTCCTCCTC+CGG 0.443491 6_2:+12763016 Msa0909720:CDS
TTTAAATGTGAGCTTGGTGC+TGG 0.444477 6_2:+12769425 Msa0909720:CDS
TATACGCGGAGGTGGTGAAA+TGG 0.448082 6_2:+12767421 Msa0909720:CDS
GTGGTGAAATGGGGAGGCAG+TGG 0.448275 6_2:+12767432 Msa0909720:CDS
TTCGCCACCGGAGGAGGAAG+CGG 0.452605 6_2:-12763023 None:intergenic
TCCGAGAACCTGAGAACAAT+AGG 0.454495 6_2:-12766669 None:intergenic
TATGAGACCGGATTTATTCA+AGG 0.457431 6_2:+12767607 Msa0909720:CDS
CATCAAGTATCTCACATCAT+AGG 0.459129 6_2:-12770517 None:intergenic
TTATGGCTACGGGTCTTATG+AGG 0.462890 6_2:+12766820 Msa0909720:CDS
ATCGAGACTCAAGCTCCAAT+TGG 0.464487 6_2:+12764577 Msa0909720:CDS
GATGTTTCCAAGCCTGAAGA+AGG 0.469052 6_2:+12765548 Msa0909720:CDS
AAGTAGAATTCCTCCTTCCT+AGG 0.474833 6_2:-12768983 None:intergenic
TCCTCTCACTACTTCCGAAT+GGG 0.476665 6_2:+12767688 Msa0909720:CDS
AAAGAAATTTACCTCCCATT+CGG 0.479223 6_2:-12767702 None:intergenic
GCATAAATGGCAGAAGTGCT+GGG 0.479981 6_2:+12767558 Msa0909720:CDS
CCAGCTGTAACAAGAATATG+TGG 0.480307 6_2:-12769199 None:intergenic
CAAAGTTCGTGGCAAAATTG+AGG 0.482652 6_2:+12769372 Msa0909720:CDS
CAGGCATGGCTTCATGCGTT+AGG 0.483360 6_2:+12765389 Msa0909720:intron
CCATTACTACTTTATGGCTA+CGG 0.485771 6_2:+12766809 Msa0909720:CDS
AAAACTTTAAGACCTTCTTC+AGG 0.489996 6_2:-12765560 None:intergenic
CATTACTACTTTATGGCTAC+GGG 0.491993 6_2:+12766810 Msa0909720:CDS
GTTTATCACCTTCCATCTGT+TGG 0.494857 6_2:+12766251 Msa0909720:CDS
TTCTGAACCTGCAAAGTTCG+TGG 0.496672 6_2:+12769361 Msa0909720:CDS
GAAGTAGTGAGAGGAATAGT+TGG 0.497815 6_2:-12767680 None:intergenic
TGCTGGTTTCACTTAAGCTA+TGG 0.498783 6_2:-12770467 None:intergenic
GTGGTGAGAGAACGCGGCGG+TGG 0.500012 6_2:-12762949 None:intergenic
GGAGGCAGTGGTATGAGAAT+GGG 0.502337 6_2:+12767444 Msa0909720:CDS
CATCATCACCAGCCCATTCA+AGG 0.504061 6_2:-12764627 None:intergenic
CCGTAGCCATAAAGTAGTAA+TGG 0.504218 6_2:-12766809 None:intergenic
TGTAGGAATGGGGTGATCCT+AGG 0.505042 6_2:+12768966 Msa0909720:intron
AAGTCGTCATCGGACGGCGG+TGG 0.505447 6_2:-12762968 None:intergenic
TTAGAATCGATAACTACTAC+TGG 0.506653 6_2:+12763081 Msa0909720:CDS
AAAGTTCGTGGCAAAATTGA+GGG 0.507662 6_2:+12769373 Msa0909720:CDS
GATACCTGACATGACGGAAT+CGG 0.508137 6_2:-12763168 None:intergenic
CTATGATGTGAGATACTTGA+TGG 0.509337 6_2:+12770518 Msa0909720:three_prime_UTR
CCACTTTCAAGACTTCTTAG+CGG 0.515524 6_2:-12766278 None:intergenic
ATGTGAGATACTTGATGGTA+TGG 0.515818 6_2:+12770523 Msa0909720:three_prime_UTR
ACAGCAGCCTTGAATAAATC+CGG 0.515832 6_2:-12767614 None:intergenic
TTTGCGTTACCTTTCTCTGT+GGG 0.516043 6_2:-12765726 None:intergenic
TACACCGATTCCGTCATGTC+AGG 0.516554 6_2:+12763164 Msa0909720:CDS
AAGAAGTCTTGAAAGTGGTC+AGG 0.517098 6_2:+12766283 Msa0909720:CDS
TAAGAAAACATTGGAAGGAA+AGG 0.518481 6_2:+12764211 Msa0909720:CDS
TCATCCAAAATAACATGCTC+CGG 0.519337 6_2:-12764323 None:intergenic
TGTTTATGACTATGATATGA+AGG 0.520048 6_2:+12766409 Msa0909720:CDS
CTGTGAAGAGATGGAATGAT+TGG 0.521765 6_2:+12770439 Msa0909720:three_prime_UTR
ATCCCAGTTTCAAGTCATCA+AGG 0.523752 6_2:+12767357 Msa0909720:CDS
GTGTGGATGCTGTGAAGAGA+TGG 0.525321 6_2:+12770430 Msa0909720:three_prime_UTR
CCTTATATCTGATAACCAAA+AGG 0.525429 6_2:+12764256 Msa0909720:CDS
TGGAGTTCTTAATATGAGAC+CGG 0.525945 6_2:+12767595 Msa0909720:CDS
GTTAATGACACCATGCCTAC+AGG 0.526408 6_2:+12764287 Msa0909720:CDS
GTAATAAGGCCCTTTGCGTA+CGG 0.527741 6_2:-12764183 None:intergenic
AGAACCAGGGTATATGCTGC+TGG 0.529916 6_2:-12770484 None:intergenic
TAATAAGGCCCTTTGCGTAC+GGG 0.530860 6_2:-12764182 None:intergenic
TTACTATTATAAGAAAACAT+TGG 0.531391 6_2:+12764202 Msa0909720:CDS
GTTGTCACAACATCCACAAA+AGG 0.531779 6_2:-12767647 None:intergenic
CTGTTGTTTAAATGTGAGCT+TGG 0.533236 6_2:+12769419 Msa0909720:CDS
GAACAAAACTCAAGGAAATG+AGG 0.533398 6_2:-12766616 None:intergenic
ATAGGAAAGCACATCGGGAT+CGG 0.541107 6_2:-12763123 None:intergenic
TGTAACATCAAACCTTGAAT+GGG 0.542086 6_2:+12764615 Msa0909720:CDS
GTTAAACATATTTGCAAACA+AGG 0.545908 6_2:-12770598 None:intergenic
CAGTGGGCACGTGCTTCAGA+TGG 0.549003 6_2:+12766725 Msa0909720:CDS
TATTGATCCAGTATACTATG+TGG 0.549092 6_2:+12766316 Msa0909720:CDS
GTGAGGACGGAAACAGTTAG+TGG 0.550395 6_2:-12762906 None:intergenic
AATAAGAACTGTAGTTGAAG+AGG 0.553201 6_2:-12765702 None:intergenic
CAATAGGAGACAAATAATAC+AGG 0.554932 6_2:-12766653 None:intergenic
TATGACTATGATATGAAGGC+TGG 0.555817 6_2:+12766413 Msa0909720:CDS
TATTATAAGAAAACATTGGA+AGG 0.558599 6_2:+12764206 Msa0909720:CDS
AAAGATCTTGTGAAGCTCGA+TGG 0.561830 6_2:+12766779 Msa0909720:CDS
GAGATCATTTCTTTATTAAG+CGG 0.562126 6_2:+12765627 Msa0909720:CDS
TGGATGCCATTAACAAAGCG+TGG 0.562180 6_2:-12770659 None:intergenic
CATCGGAAAGTAAAACTACA+AGG 0.563926 6_2:+12765510 Msa0909720:CDS
AGCATCAGGTCCTGTAGGCA+TGG 0.564851 6_2:-12764297 None:intergenic
TTCCTCTCACTACTTCCGAA+TGG 0.570331 6_2:+12767687 Msa0909720:CDS
CATAAATGGCAGAAGTGCTG+GGG 0.572685 6_2:+12767559 Msa0909720:CDS
TATCGGCACCCGTACGCAAA+GGG 0.574415 6_2:+12764174 Msa0909720:CDS
CAACAAAATACGTCACTGAA+AGG 0.580218 6_2:+12766702 Msa0909720:CDS
ATAGCTCATATACGCGGAGG+TGG 0.584461 6_2:+12767413 Msa0909720:CDS
TGCTCTAGTTTATGTAACAA+TGG 0.586588 6_2:+12764648 Msa0909720:CDS
AATACGTCACTGAAAGGCAG+TGG 0.587769 6_2:+12766708 Msa0909720:CDS
TGGTAGAATGAATGATGATA+CGG 0.587894 6_2:-12762700 None:intergenic
TCGACCTTCTTCGCCACCGG+AGG 0.588350 6_2:-12763032 None:intergenic
AACATCCACAAAAGGTACTC+CGG 0.590525 6_2:-12767639 None:intergenic
GATAAAAGGAAGGATAAAGG+AGG 0.590891 6_2:+12764145 Msa0909720:CDS
TGCGGAGGTGAAGTCGTCAT+CGG 0.590943 6_2:-12762978 None:intergenic
GAGGTGAAGTCGTCATCGGA+CGG 0.591838 6_2:-12762974 None:intergenic
TAGGAAGAATGTATAAGTGA+AGG 0.591931 6_2:-12770361 None:intergenic
AGGCTTTCATTGTTAGATCG+AGG 0.595178 6_2:+12767377 Msa0909720:CDS
GGAATGGGGTGATCCTAGGA+AGG 0.598189 6_2:+12768970 Msa0909720:intron
CCGCTAAGAAGTCTTGAAAG+TGG 0.599154 6_2:+12766278 Msa0909720:CDS
ATTTGCGTTACCTTTCTCTG+TGG 0.601829 6_2:-12765727 None:intergenic
GAGCAATTGAACAAAACTCA+AGG 0.602027 6_2:-12766624 None:intergenic
ACATCAAACCTTGAATGGGC+TGG 0.602081 6_2:+12764619 Msa0909720:CDS
CTTATGTTACTGTAGGAATG+GGG 0.605360 6_2:+12768956 Msa0909720:intron
TGAGACTGTGACAGAGATTG+CGG 0.609474 6_2:-12762996 None:intergenic
TACGCGGAGGTGGTGAAATG+GGG 0.610390 6_2:+12767423 Msa0909720:CDS
CAGCACGAATACTACAGTAT+CGG 0.612278 6_2:+12764362 Msa0909720:CDS
TAGGCTTAGAAGTTAGAACC+AGG 0.613666 6_2:-12770498 None:intergenic
TTCTCCGCTTCCTCCTCCGG+TGG 0.614838 6_2:+12763019 Msa0909720:CDS
ACGGAGATAGGAAAGCACAT+CGG 0.617599 6_2:-12763129 None:intergenic
ATATCGGCACCCGTACGCAA+AGG 0.621018 6_2:+12764173 Msa0909720:CDS
GGAGGAGCATCAGGTCCTGT+AGG 0.622563 6_2:-12764302 None:intergenic
GCGGTTCACCAACAGATGGA+AGG 0.623497 6_2:-12766259 None:intergenic
TTGCGTTACCTTTCTCTGTG+GGG 0.623901 6_2:-12765725 None:intergenic
AAGTCTTGAAAGTGGTCAGG+TGG 0.624496 6_2:+12766286 Msa0909720:CDS
GGCATGGTGTCATTAACAGA+TGG 0.625215 6_2:-12764281 None:intergenic
ATTATTGATACCTGACATGA+CGG 0.625741 6_2:-12763174 None:intergenic
CTTAGCGGTTCACCAACAGA+TGG 0.627063 6_2:-12766263 None:intergenic
TTTGATGTTACACTGACAAG+AGG 0.630655 6_2:-12764604 None:intergenic
ACGGCGGTGGTGAGAGAACG+CGG 0.632285 6_2:-12762955 None:intergenic
TTTCGGTATACAAGTGACAT+GGG 0.632469 6_2:-12766758 None:intergenic
GGATGCCATTAACAAAGCGT+GGG 0.633009 6_2:-12770658 None:intergenic
TCTCACTACTTCCGAATGGG+AGG 0.634084 6_2:+12767691 Msa0909720:CDS
TTGTTCTTACATTATCAACA+GGG 0.634748 6_2:-12769024 None:intergenic
GCGGAGGTGGTGAAATGGGG+AGG 0.638605 6_2:+12767426 Msa0909720:CDS
GACACTACTGTCAGCCATCG+TGG 0.641773 6_2:+12765605 Msa0909720:CDS
AGCCTTGATGACTTGAAACT+GGG 0.642429 6_2:-12767359 None:intergenic
TCCCATTCGGAAGTAGTGAG+AGG 0.647947 6_2:-12767689 None:intergenic
TAATATTCTTAGACCTGACA+AGG 0.648307 6_2:+12764672 Msa0909720:CDS
TCATAGTCATAAACAGAGGG+AGG 0.649085 6_2:-12766401 None:intergenic
ATACGTCACTGAAAGGCAGT+GGG 0.650078 6_2:+12766709 Msa0909720:CDS
TGTTCTTACATTATCAACAG+GGG 0.651767 6_2:-12769023 None:intergenic
ATATCATAGTCATAAACAGA+GGG 0.651784 6_2:-12766404 None:intergenic
GGTTCAGAATACAGAACACG+TGG 0.652073 6_2:-12769347 None:intergenic
GCATATGCAGAAGACACCAA+AGG 0.654059 6_2:+12764523 Msa0909720:CDS
TAAAGAAATGATCTCCACGA+TGG 0.660652 6_2:-12765619 None:intergenic
AAAAGATACTTGTCTTTACG+AGG 0.660853 6_2:+12765424 Msa0909720:CDS
TTCAGAAATGCATTATGACA+TGG 0.664136 6_2:-12762720 None:intergenic
GTCTTGGGATGCCTAAAGTG+TGG 0.667262 6_2:+12770413 Msa0909720:exon
TATTGTTCTCAGGTTCTCGG+AGG 0.667662 6_2:+12766671 Msa0909720:CDS
GTGAAGTCGTCATCGGACGG+CGG 0.673247 6_2:-12762971 None:intergenic
CAGCTGTAACAAGAATATGT+GGG 0.675217 6_2:-12769198 None:intergenic
ATGGGGTGATCCTAGGAAGG+AGG 0.677198 6_2:+12768973 Msa0909720:CDS
TCCAAAATAACATGCTCCGG+AGG 0.678194 6_2:-12764320 None:intergenic
GAAACCAGCAGCATATACCC+TGG 0.686805 6_2:+12770480 Msa0909720:three_prime_UTR
GTTATAGCTCATATACGCGG+AGG 0.697147 6_2:+12767410 Msa0909720:CDS
ATAAATGGCAGAAGTGCTGG+GGG 0.697795 6_2:+12767560 Msa0909720:CDS
GATCGGAGCGAGAATCATCA+CGG 0.699674 6_2:-12763106 None:intergenic
CATATCATAGTCATAAACAG+AGG 0.703744 6_2:-12766405 None:intergenic
AGGCTTAGAAGTTAGAACCA+GGG 0.707056 6_2:-12770497 None:intergenic
GACTGTGACAGAGATTGCGG+AGG 0.745405 6_2:-12762993 None:intergenic
TATGTTATAGCTCATATACG+CGG 0.752567 6_2:+12767407 Msa0909720:CDS
GTTCAGAATACAGAACACGT+GGG 0.775180 6_2:-12769346 None:intergenic
GCGGTGGTGAGAGAACGCGG+CGG 0.860594 6_2:-12762952 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTATTTTATTTATT+GGG - chr6_2:12762825-12762844 None:intergenic 0.0%
!!! TTAAAATTTTATTTCTTTTC+AGG + chr6_2:12764477-12764496 Msa0909720:intron 10.0%
!!! TGTGAATTTTTTTTTAATTA+AGG - chr6_2:12764970-12764989 None:intergenic 10.0%
!! TAATTAAAAAAAAATTCACA+AGG + chr6_2:12764970-12764989 Msa0909720:intron 10.0%
!!! AAAAAGGTAATTAATTATTT+TGG - chr6_2:12765958-12765977 None:intergenic 10.0%
!!! GTTTTATTAAATATTTAAAC+AGG - chr6_2:12766540-12766559 None:intergenic 10.0%
!! TATTATTTATCTTTGTATAT+TGG - chr6_2:12768243-12768262 None:intergenic 10.0%
!!! ATACAAAAACAATTTTACAT+TGG - chr6_2:12763577-12763596 None:intergenic 15.0%
!!! ATTCATATTTTTGAATTTCT+AGG + chr6_2:12764089-12764108 Msa0909720:intron 15.0%
!!! GTTTTCTTATAATAGTAATA+AGG - chr6_2:12764200-12764219 None:intergenic 15.0%
!! TTACTATTATAAGAAAACAT+TGG + chr6_2:12764202-12764221 Msa0909720:CDS 15.0%
!!! TTTTCAATTTCAATTTGTTT+AGG + chr6_2:12764756-12764775 Msa0909720:intron 15.0%
!! TAGATATTTGAATATATACA+AGG + chr6_2:12765188-12765207 Msa0909720:intron 15.0%
!!! AATAATTAATTACCTTTTTG+AGG + chr6_2:12765959-12765978 Msa0909720:intron 15.0%
!!! ATCCATATTTATATTTCTTT+TGG + chr6_2:12767066-12767085 Msa0909720:intron 15.0%
!!! TTTAAATCATTTTCATATGT+TGG - chr6_2:12767749-12767768 None:intergenic 15.0%
!! TGTATATTGGTAAAAAAATA+TGG - chr6_2:12768230-12768249 None:intergenic 15.0%
!! TAAAGATAAAAAATATGCAT+TGG + chr6_2:12768351-12768370 Msa0909720:intron 15.0%
!! ATTCAGTTTATTTATCAATT+TGG - chr6_2:12768541-12768560 None:intergenic 15.0%
!!! AAATCATGTTGAAATTTTTT+CGG - chr6_2:12768634-12768653 None:intergenic 15.0%
!!! TATTATAATCCCTATTTTTA+AGG - chr6_2:12769714-12769733 None:intergenic 15.0%
!! TTAAAAATAGGGATTATAAT+AGG + chr6_2:12769713-12769732 Msa0909720:intron 15.0%
!!! AGTTTAATAAATTTTATTCC+CGG - chr6_2:12769832-12769851 None:intergenic 15.0%
!!! AAACCATGAAATTTTTAAAA+TGG + chr6_2:12770197-12770216 Msa0909720:intron 15.0%
!!! TGCATTTCTGAATATTTTTT+AGG + chr6_2:12762731-12762750 Msa0909720:five_prime_UTR 20.0%
!!! AAGCTTATCTTCAATTTTTT+TGG - chr6_2:12764117-12764136 None:intergenic 20.0%
!! TATTATAAGAAAACATTGGA+AGG + chr6_2:12764206-12764225 Msa0909720:CDS 20.0%
!! TTAGATCATATCATTATCAT+GGG + chr6_2:12764396-12764415 Msa0909720:intron 20.0%
!! TATCTGAACAATTAAATACT+GGG - chr6_2:12764716-12764735 None:intergenic 20.0%
!! ATATCTGAACAATTAAATAC+TGG - chr6_2:12764717-12764736 None:intergenic 20.0%
!!! AATTAGGTTCTAATTCAATT+CGG - chr6_2:12764793-12764812 None:intergenic 20.0%
!!! TATCTAATTGAGCTTTTTTA+AGG + chr6_2:12764934-12764953 Msa0909720:intron 20.0%
!! AAACAAATATTTCTTGTTCT+CGG - chr6_2:12765486-12765505 None:intergenic 20.0%
!!! ATTATTTTGGCTTTTGAAAA+TGG - chr6_2:12765945-12765964 None:intergenic 20.0%
!!! AGGTGATAAACAATTATTTT+TGG - chr6_2:12766242-12766261 None:intergenic 20.0%
!!! CTCTAGAATTTAATTTCATA+AGG - chr6_2:12766516-12766535 None:intergenic 20.0%
!! AGCCAAAAGAAATATAAATA+TGG - chr6_2:12767071-12767090 None:intergenic 20.0%
!! TCAGAAATCTATTAATGAAA+CGG - chr6_2:12767102-12767121 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG - chr6_2:12767302-12767321 None:intergenic 20.0%
!! TAAAGTTAAAAAGAAACATC+TGG - chr6_2:12767780-12767799 None:intergenic 20.0%
!!! CTCATTATGTCTTTTAAAAT+TGG + chr6_2:12767801-12767820 Msa0909720:intron 20.0%
!!! ATTTTATAACTTGTAAGAGA+AGG + chr6_2:12768012-12768031 Msa0909720:intron 20.0%
!! TATCTTTACAAAAAAGACAA+CGG + chr6_2:12768066-12768085 Msa0909720:intron 20.0%
!! AAATATGGTCAAAATATGTT+AGG - chr6_2:12768215-12768234 None:intergenic 20.0%
!! AATATCATATAAGATGTTGT+TGG + chr6_2:12768259-12768278 Msa0909720:intron 20.0%
!!! AATCATGTTGAAATTTTTTC+GGG - chr6_2:12768633-12768652 None:intergenic 20.0%
!!! AATTTGTTTGTCTTTTAAAC+TGG + chr6_2:12768756-12768775 Msa0909720:intron 20.0%
!!! TAATTTTTATTCTCTCTGTA+AGG + chr6_2:12769102-12769121 Msa0909720:intron 20.0%
!!! TTTTAAACTTGTTTAGTGTT+TGG + chr6_2:12769495-12769514 Msa0909720:intron 20.0%
!!! TTTAAACTTGTTTAGTGTTT+GGG + chr6_2:12769496-12769515 Msa0909720:intron 20.0%
!! AGTTTATCAAATTTATTGCA+AGG + chr6_2:12769598-12769617 Msa0909720:intron 20.0%
!! GTATTTAGAAAAAAGATGTT+TGG + chr6_2:12769664-12769683 Msa0909720:intron 20.0%
!! GTTAACATTATAATATTCCA+AGG + chr6_2:12769686-12769705 Msa0909720:intron 20.0%
!!! GTTTAATAAATTTTATTCCC+GGG - chr6_2:12769831-12769850 None:intergenic 20.0%
!! ATTAAACTTGTAACAAACAT+AGG + chr6_2:12769844-12769863 Msa0909720:intron 20.0%
!!! AAGCCATTTTAAAAATTTCA+TGG - chr6_2:12770203-12770222 None:intergenic 20.0%
!!! TTTTTCTTCTCAAATGTATT+TGG + chr6_2:12770266-12770285 Msa0909720:intron 20.0%
!!! AACTTTAGAGAGTAAAAAAA+TGG - chr6_2:12770682-12770701 None:intergenic 20.0%
!!! TTAAAAAGTATTTTTCAGCT+TGG + chr6_2:12770713-12770732 Msa0909720:three_prime_UTR 20.0%
!! TTCATTCAGAAGATATTTTG+AGG - chr6_2:12763311-12763330 None:intergenic 25.0%
! TAGCTTATGAAAAAAGCTTA+TGG - chr6_2:12763413-12763432 None:intergenic 25.0%
! TAGCTTATAAAAACAGCTTA+AGG - chr6_2:12763603-12763622 None:intergenic 25.0%
!!! GCTGTTTTTATAAGCTATAT+TGG + chr6_2:12763606-12763625 Msa0909720:intron 25.0%
! ATATGTTTGAACTCAATGTA+TGG + chr6_2:12763914-12763933 Msa0909720:intron 25.0%
!!! ATAAGAAGGCTTTTGAAATT+AGG + chr6_2:12764037-12764056 Msa0909720:intron 25.0%
!!! TATTTTGGATGAGAATATCA+AGG + chr6_2:12764334-12764353 Msa0909720:CDS 25.0%
! GTTAGATCATATCATTATCA+TGG + chr6_2:12764395-12764414 Msa0909720:intron 25.0%
!!! ATGCTACTAACTTGTTATTT+GGG - chr6_2:12764507-12764526 None:intergenic 25.0%
!!! TATGCTACTAACTTGTTATT+TGG - chr6_2:12764508-12764527 None:intergenic 25.0%
! AGTATATATTTCATCTCCTT+TGG - chr6_2:12764542-12764561 None:intergenic 25.0%
! TCTTTATATCTGGCTAAATT+AGG - chr6_2:12764809-12764828 None:intergenic 25.0%
!! ATTTTCAGCATCTTTATATC+TGG - chr6_2:12764819-12764838 None:intergenic 25.0%
! AAGGTTTATAGTTATTCAGT+AGG + chr6_2:12764989-12765008 Msa0909720:intron 25.0%
!! GAAATATTTGTTTGTTGCAT+CGG + chr6_2:12765493-12765512 Msa0909720:CDS 25.0%
! GAGATCATTTCTTTATTAAG+CGG + chr6_2:12765627-12765646 Msa0909720:CDS 25.0%
! CAAGATTATGCTCAAAATAA+AGG - chr6_2:12765776-12765795 None:intergenic 25.0%
!! GAAACTTTTAATCCTCAAAA+AGG - chr6_2:12765974-12765993 None:intergenic 25.0%
! ATTCATGTGTTAACACTTTA+CGG - chr6_2:12766079-12766098 None:intergenic 25.0%
!! AGAAAATTCAGTGTAAGTTT+TGG - chr6_2:12766148-12766167 None:intergenic 25.0%
! TTTCTTTAGTGTGAAAATTC+AGG + chr6_2:12766163-12766182 Msa0909720:intron 25.0%
! ATATCATAGTCATAAACAGA+GGG - chr6_2:12766407-12766426 None:intergenic 25.0%
! TGTTTATGACTATGATATGA+AGG + chr6_2:12766409-12766428 Msa0909720:CDS 25.0%
! AATAAAACTATAAGGACTTG+TGG + chr6_2:12766552-12766571 Msa0909720:intron 25.0%
! CAAAGCATAGAATTCAAAAT+TGG - chr6_2:12766888-12766907 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG + chr6_2:12766886-12766905 Msa0909720:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG + chr6_2:12766897-12766916 Msa0909720:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG - chr6_2:12766931-12766950 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG + chr6_2:12766974-12766993 Msa0909720:intron 25.0%
! TTTGCTTGTCTAACAATTAA+AGG - chr6_2:12767138-12767157 None:intergenic 25.0%
! TGAAAAAAAATTCTGTTCCA+AGG + chr6_2:12767526-12767545 Msa0909720:CDS 25.0%
!! ATCATTTTCATATGTTGGTA+TGG - chr6_2:12767744-12767763 None:intergenic 25.0%
! AATACAAATTCATGCTGTTA+GGG - chr6_2:12767955-12767974 None:intergenic 25.0%
!! AAGATATTTTCCTTTCTTAC+AGG - chr6_2:12768052-12768071 None:intergenic 25.0%
! AAGATCAATTAAAACAAGAG+AGG - chr6_2:12768131-12768150 None:intergenic 25.0%
!! ATACTTTTAATGCATCAAGT+TGG - chr6_2:12768681-12768700 None:intergenic 25.0%
! TTTAAACTGGTATTAAGAAG+AGG + chr6_2:12768769-12768788 Msa0909720:intron 25.0%
! TAAAACTCACATACTTAACT+CGG - chr6_2:12768829-12768848 None:intergenic 25.0%
!! GATTTCTTTTGTGTTTCTTT+TGG + chr6_2:12768917-12768936 Msa0909720:intron 25.0%
! TTATTTCCTTATGTTACTGT+AGG + chr6_2:12768949-12768968 Msa0909720:intron 25.0%
! TTGTTCTTACATTATCAACA+GGG - chr6_2:12769027-12769046 None:intergenic 25.0%
! TTTGTTCTTACATTATCAAC+AGG - chr6_2:12769028-12769047 None:intergenic 25.0%
! TCGGACAAAAAATAAATATG+CGG - chr6_2:12769079-12769098 None:intergenic 25.0%
! GAGAGAATAAAAATTATGCT+CGG - chr6_2:12769098-12769117 None:intergenic 25.0%
! ACAAGTTTAAAAACAAACAG+CGG - chr6_2:12769487-12769506 None:intergenic 25.0%
!! TTAAACTTGTTTAGTGTTTG+GGG + chr6_2:12769497-12769516 Msa0909720:intron 25.0%
!!! TTGTTCTTTTGTTTTGGTTA+CGG + chr6_2:12769538-12769557 Msa0909720:intron 25.0%
! ATTCCTTAGAACATAAAGAT+GGG + chr6_2:12769627-12769646 Msa0909720:intron 25.0%
!!! CATCTTTTTTCTAAATACCT+TGG - chr6_2:12769662-12769681 None:intergenic 25.0%
!! TAATTTTATTCCCATCTTCA+TGG + chr6_2:12769746-12769765 Msa0909720:intron 25.0%
!! AATTTTATTCCCATCTTCAT+GGG + chr6_2:12769747-12769766 Msa0909720:intron 25.0%
!! TTTATTTCCACCATTTTCTT+TGG + chr6_2:12769773-12769792 Msa0909720:intron 25.0%
!! TTATTTCCACCATTTTCTTT+GGG + chr6_2:12769774-12769793 Msa0909720:intron 25.0%
!! AAAAGTTTTCCCAAAGAAAA+TGG - chr6_2:12769786-12769805 None:intergenic 25.0%
! AGTTATATTTGTAGATTCCT+GGG - chr6_2:12769894-12769913 None:intergenic 25.0%
! AAGTTATATTTGTAGATTCC+TGG - chr6_2:12769895-12769914 None:intergenic 25.0%
! TAGTACCTTCATTAAACTAA+GGG - chr6_2:12769930-12769949 None:intergenic 25.0%
! ATAGTACCTTCATTAAACTA+AGG - chr6_2:12769931-12769950 None:intergenic 25.0%
! ATTTATTAGTGAGCAAGTTA+TGG + chr6_2:12769998-12770017 Msa0909720:intron 25.0%
!! GTCTTTAAAAAGGAAAGTAA+AGG - chr6_2:12770228-12770247 None:intergenic 25.0%
!! CAACGAATTTGTCTTTAAAA+AGG - chr6_2:12770238-12770257 None:intergenic 25.0%
! GTTAAACATATTTGCAAACA+AGG - chr6_2:12770601-12770620 None:intergenic 25.0%
!! CATTTTACTCATTGAGTATA+TGG + chr6_2:12770625-12770644 Msa0909720:three_prime_UTR 25.0%
! TTGAGAAAAAGATAAAGTAG+CGG + chr6_2:12770744-12770763 Msa0909720:three_prime_UTR 25.0%
TGGTAGAATGAATGATGATA+CGG - chr6_2:12762703-12762722 None:intergenic 30.0%
TTCAGAAATGCATTATGACA+TGG - chr6_2:12762723-12762742 None:intergenic 30.0%
TTAGAATCGATAACTACTAC+TGG + chr6_2:12763081-12763100 Msa0909720:CDS 30.0%
ATTATTGATACCTGACATGA+CGG - chr6_2:12763177-12763196 None:intergenic 30.0%
! TAAGCTATTCTAGAGAGATA+TGG + chr6_2:12763351-12763370 Msa0909720:intron 30.0%
!!! GCTTTTTTCATAAGCTATCT+TGG + chr6_2:12763416-12763435 Msa0909720:intron 30.0%
AAGCTATATTGGAGAACTTA+TGG + chr6_2:12763617-12763636 Msa0909720:intron 30.0%
! TTAGGTTATTTGAGACTGTT+TGG - chr6_2:12763733-12763752 None:intergenic 30.0%
TCAAATAACCTAATCCAAAC+AGG + chr6_2:12763740-12763759 Msa0909720:intron 30.0%
TGAAAACAGCTTATGACATA+AGG - chr6_2:12763766-12763785 None:intergenic 30.0%
TCAAAAAAGTCAATCCAAAG+AGG + chr6_2:12763833-12763852 Msa0909720:intron 30.0%
AATGTCATATTGAACCTCTT+TGG - chr6_2:12763850-12763869 None:intergenic 30.0%
ATATACACACTCACATAAGA+AGG + chr6_2:12764023-12764042 Msa0909720:intron 30.0%
! AAGCTTTTTGCTGAGATAAA+AGG + chr6_2:12764131-12764150 Msa0909720:CDS 30.0%
! TTTTTGCTGAGATAAAAGGA+AGG + chr6_2:12764135-12764154 Msa0909720:CDS 30.0%
TGAGATAAAAGGAAGGATAA+AGG + chr6_2:12764142-12764161 Msa0909720:CDS 30.0%
GATAAAGGAGGAAGATATAT+CGG + chr6_2:12764157-12764176 Msa0909720:CDS 30.0%
TAAGAAAACATTGGAAGGAA+AGG + chr6_2:12764211-12764230 Msa0909720:CDS 30.0%
!! CCTTTTGGTTATCAGATATA+AGG - chr6_2:12764259-12764278 None:intergenic 30.0%
CCTTATATCTGATAACCAAA+AGG + chr6_2:12764256-12764275 Msa0909720:CDS 30.0%
TGTAACATCAAACCTTGAAT+GGG + chr6_2:12764615-12764634 Msa0909720:CDS 30.0%
! TGCTCTAGTTTATGTAACAA+TGG + chr6_2:12764648-12764667 Msa0909720:CDS 30.0%
TAATATTCTTAGACCTGACA+AGG + chr6_2:12764672-12764691 Msa0909720:CDS 30.0%
! CAATTAAATACTGGGTTGAA+AGG - chr6_2:12764708-12764727 None:intergenic 30.0%
TTCAGATATAATCAGCACTT+GGG + chr6_2:12764728-12764747 Msa0909720:intron 30.0%
CTGAAAATTAGATGAGATTG+TGG + chr6_2:12764831-12764850 Msa0909720:intron 30.0%
! TTTTCTGCTTAATTCAAAGC+CGG + chr6_2:12764892-12764911 Msa0909720:intron 30.0%
!!! TTTCTGAAGCTGCTATTTTT+TGG - chr6_2:12765073-12765092 None:intergenic 30.0%
!! ATGATAATGGTTTAGAAGTG+AGG - chr6_2:12765267-12765286 None:intergenic 30.0%
CTAAAACTTATATACACGTG+AGG - chr6_2:12765293-12765312 None:intergenic 30.0%
! GTTTAGTATTTTGCTGCATA+TGG + chr6_2:12765316-12765335 Msa0909720:intron 30.0%
AAAAGATACTTGTCTTTACG+AGG + chr6_2:12765424-12765443 Msa0909720:CDS 30.0%
!! AAAACTTTAAGACCTTCTTC+AGG - chr6_2:12765563-12765582 None:intergenic 30.0%
AATAAGAACTGTAGTTGAAG+AGG - chr6_2:12765705-12765724 None:intergenic 30.0%
! TGCTTTCCAAAATGTTGTTT+AGG + chr6_2:12765882-12765901 Msa0909720:intron 30.0%
! AGTTCTCCTAAACAACATTT+TGG - chr6_2:12765891-12765910 None:intergenic 30.0%
ACACTTTACGGAAATAATCA+AGG - chr6_2:12766067-12766086 None:intergenic 30.0%
TATTGATCCAGTATACTATG+TGG + chr6_2:12766316-12766335 Msa0909720:CDS 30.0%
CATATCATAGTCATAAACAG+AGG - chr6_2:12766408-12766427 None:intergenic 30.0%
!!! AGTTTTGAAGAAGATTGACT+CGG + chr6_2:12766442-12766461 Msa0909720:CDS 30.0%
TGATGTAAAATTGAACAGCT+TGG - chr6_2:12766491-12766510 None:intergenic 30.0%
! AAGCTGTTCAATTTTACATC+AGG + chr6_2:12766490-12766509 Msa0909720:intron 30.0%
CAATAGGAGACAAATAATAC+AGG - chr6_2:12766656-12766675 None:intergenic 30.0%
TCAGATCCATTACTACTTTA+TGG + chr6_2:12766803-12766822 Msa0909720:CDS 30.0%
! TTCTTGTCTTATTGGAACAA+AGG + chr6_2:12766982-12767001 Msa0909720:intron 30.0%
ATATGGATGTTCATGAACAA+AGG - chr6_2:12767054-12767073 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG + chr6_2:12767181-12767200 Msa0909720:intron 30.0%
TATGTTATAGCTCATATACG+CGG + chr6_2:12767407-12767426 Msa0909720:CDS 30.0%
ATTTATGCAAAGTCTTTCCT+TGG - chr6_2:12767546-12767565 None:intergenic 30.0%
AAGGAAAGACTTTGCATAAA+TGG + chr6_2:12767545-12767564 Msa0909720:CDS 30.0%
AAAGAAATTTACCTCCCATT+CGG - chr6_2:12767705-12767724 None:intergenic 30.0%
TTTCATATGTTGGTATGGAA+TGG - chr6_2:12767739-12767758 None:intergenic 30.0%
! TGTCTTTTATGATTGCCTTT+AGG + chr6_2:12767851-12767870 Msa0909720:intron 30.0%
ATACAAATTCATGCTGTTAG+GGG - chr6_2:12767954-12767973 None:intergenic 30.0%
CAATACAAATTCATGCTGTT+AGG - chr6_2:12767956-12767975 None:intergenic 30.0%
GTAAGAGAAGGAAAATATGT+TGG + chr6_2:12768024-12768043 Msa0909720:intron 30.0%
ATCAATTAAAACAAGAGAGG+AGG - chr6_2:12768128-12768147 None:intergenic 30.0%
!! TCAACTGTGTCACTTAATAT+GGG + chr6_2:12768388-12768407 Msa0909720:intron 30.0%
!!! TTTTTTTTCTCTCATGACAC+TGG + chr6_2:12768423-12768442 Msa0909720:intron 30.0%
TAGCTGTGATTTCTTCTAAA+TGG - chr6_2:12768479-12768498 None:intergenic 30.0%
!!! TTTTTTCGGGAAATGAGAAA+TGG - chr6_2:12768620-12768639 None:intergenic 30.0%
CATTTGCTTGTTTACTTTCA+TGG - chr6_2:12768709-12768728 None:intergenic 30.0%
AAGTAAACAAGCAAATGTGT+CGG + chr6_2:12768712-12768731 Msa0909720:intron 30.0%
! ATGAAATTCAAGAGCTTTGA+TGG - chr6_2:12768863-12768882 None:intergenic 30.0%
TGTTCTTACATTATCAACAG+GGG - chr6_2:12769026-12769045 None:intergenic 30.0%
AGAACAAATACTGCACTTAA+TGG + chr6_2:12769040-12769059 Msa0909720:intron 30.0%
TTTATTCTCTCTGTAAGGAA+TGG + chr6_2:12769107-12769126 Msa0909720:intron 30.0%
!! ACGACTTTGTTCTTTTGTTT+TGG + chr6_2:12769532-12769551 Msa0909720:intron 30.0%
CATTCCTTAGAACATAAAGA+TGG + chr6_2:12769626-12769645 Msa0909720:intron 30.0%
ATTCCCATCTTTATGTTCTA+AGG - chr6_2:12769633-12769652 None:intergenic 30.0%
! AAGATGGGAATTTTATTCCA+AGG + chr6_2:12769642-12769661 Msa0909720:intron 30.0%
TTCCAAGGAACCTTAAAAAT+AGG + chr6_2:12769701-12769720 Msa0909720:intron 30.0%
TCCAAGGAACCTTAAAAATA+GGG + chr6_2:12769702-12769721 Msa0909720:intron 30.0%
AATAAAGTTCCCATGAAGAT+GGG - chr6_2:12769759-12769778 None:intergenic 30.0%
AAATAAAGTTCCCATGAAGA+TGG - chr6_2:12769760-12769779 None:intergenic 30.0%
! GTTTTTATGATTTTATGCCC+AGG + chr6_2:12769874-12769893 Msa0909720:intron 30.0%
!! AGTTTAATGAAGGTACTATG+TGG + chr6_2:12769932-12769951 Msa0909720:intron 30.0%
AGTTCTACATTTAAACTCCT+AGG - chr6_2:12770106-12770125 None:intergenic 30.0%
ATGTAGATTTGAGAAACTTC+AGG + chr6_2:12770332-12770351 Msa0909720:intron 30.0%
TAGGAAGAATGTATAAGTGA+AGG - chr6_2:12770364-12770383 None:intergenic 30.0%
! TAGTCATGTTTAGAGTCTTT+AGG - chr6_2:12770383-12770402 None:intergenic 30.0%
TGACTAATCATCTTTAGTCT+TGG + chr6_2:12770397-12770416 Msa0909720:exon 30.0%
! GACTAATCATCTTTAGTCTT+GGG + chr6_2:12770398-12770417 Msa0909720:exon 30.0%
! GGTAATTTCAGATTTTCTCT+AGG - chr6_2:12770580-12770599 None:intergenic 30.0%
CATTGAGTATATGGCAATAA+AGG + chr6_2:12770634-12770653 Msa0909720:three_prime_UTR 30.0%
AAAAAGGAAGAGAAAGAGTG+AGG - chr6_2:12762926-12762945 None:intergenic 35.0%
! ATCATTTTCTTGACGGAGAT+AGG - chr6_2:12763144-12763163 None:intergenic 35.0%
! CGGTGTAATCATTTTCTTGA+CGG - chr6_2:12763151-12763170 None:intergenic 35.0%
! CATACGTCATAAGCTGATTT+CGG - chr6_2:12763384-12763403 None:intergenic 35.0%
ACGAAAACTGCCTATGAAAT+GGG + chr6_2:12763457-12763476 Msa0909720:intron 35.0%
AACTCAATGTATGGACACTA+TGG + chr6_2:12763923-12763942 Msa0909720:intron 35.0%
! AGAGTGTTCATTGTGCAAAT+GGG + chr6_2:12763946-12763965 Msa0909720:intron 35.0%
TTCATTGTGCAAATGGGTAA+AGG + chr6_2:12763952-12763971 Msa0909720:intron 35.0%
GTGAGTGTGTATATAGCAAT+CGG - chr6_2:12764017-12764036 None:intergenic 35.0%
GATAAAAGGAAGGATAAAGG+AGG + chr6_2:12764145-12764164 Msa0909720:CDS 35.0%
! CATTAACAGATGGAACCTTT+TGG - chr6_2:12764274-12764293 None:intergenic 35.0%
TCATCCAAAATAACATGCTC+CGG - chr6_2:12764326-12764345 None:intergenic 35.0%
!!! CTACAGTATCGGTACTTTTA+AGG + chr6_2:12764373-12764392 Msa0909720:CDS 35.0%
TTTGATGTTACACTGACAAG+AGG - chr6_2:12764607-12764626 None:intergenic 35.0%
GTGTAACATCAAACCTTGAA+TGG + chr6_2:12764614-12764633 Msa0909720:CDS 35.0%
GTTCAGATATAATCAGCACT+TGG + chr6_2:12764727-12764746 Msa0909720:intron 35.0%
AAGCAGAAAACATCCAGTTT+CGG - chr6_2:12764882-12764901 None:intergenic 35.0%
TACCATGTTGAAACAAGACA+AGG - chr6_2:12765166-12765185 None:intergenic 35.0%
ACACGTGAGGTAAATGATAA+TGG - chr6_2:12765280-12765299 None:intergenic 35.0%
CATCGGAAAGTAAAACTACA+AGG + chr6_2:12765510-12765529 Msa0909720:CDS 35.0%
!! TAAAGTTTTGACACAACGTG+TGG + chr6_2:12765574-12765593 Msa0909720:CDS 35.0%
TAAAGAAATGATCTCCACGA+TGG - chr6_2:12765622-12765641 None:intergenic 35.0%
AATTATAATGACAGCGTGCT+TGG + chr6_2:12765800-12765819 Msa0909720:intron 35.0%
GTTGCATATGAGAGAGAAAA+TGG + chr6_2:12766212-12766231 Msa0909720:CDS 35.0%
GAAGAATCCACATAGTATAC+TGG - chr6_2:12766326-12766345 None:intergenic 35.0%
TATGACTATGATATGAAGGC+TGG + chr6_2:12766413-12766432 Msa0909720:CDS 35.0%
GAACAAAACTCAAGGAAATG+AGG - chr6_2:12766619-12766638 None:intergenic 35.0%
GAGCAATTGAACAAAACTCA+AGG - chr6_2:12766627-12766646 None:intergenic 35.0%
ATTTGTCTCCTATTGTTCTC+AGG + chr6_2:12766661-12766680 Msa0909720:CDS 35.0%
CAACAAAATACGTCACTGAA+AGG + chr6_2:12766702-12766721 Msa0909720:CDS 35.0%
TTTCGGTATACAAGTGACAT+GGG - chr6_2:12766761-12766780 None:intergenic 35.0%
! TTTTCGGTATACAAGTGACA+TGG - chr6_2:12766762-12766781 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+CGG + chr6_2:12766809-12766828 Msa0909720:CDS 35.0%
CATTACTACTTTATGGCTAC+GGG + chr6_2:12766810-12766829 Msa0909720:CDS 35.0%
CATCTTGCATACAACAAAAC+AGG - chr6_2:12767031-12767050 None:intergenic 35.0%
AATTGTTAGACAAGCAAAGC+TGG + chr6_2:12767140-12767159 Msa0909720:intron 35.0%
TGCAAAACTTATGCAACCAA+AGG - chr6_2:12767238-12767257 None:intergenic 35.0%
TGGAGTTCTTAATATGAGAC+CGG + chr6_2:12767595-12767614 Msa0909720:CDS 35.0%
TATGAGACCGGATTTATTCA+AGG + chr6_2:12767607-12767626 Msa0909720:CDS 35.0%
AATATCAGCCAATGCATCTT+TGG - chr6_2:12767916-12767935 None:intergenic 35.0%
TATGTTGGAACCTGTAAGAA+AGG + chr6_2:12768039-12768058 Msa0909720:intron 35.0%
!! AGTGCTTCTGTTTGATTTTC+TGG + chr6_2:12768090-12768109 Msa0909720:intron 35.0%
TCAACCAAGTCATCTCATAT+GGG - chr6_2:12768176-12768195 None:intergenic 35.0%
!! GTCAACTGTGTCACTTAATA+TGG + chr6_2:12768387-12768406 Msa0909720:intron 35.0%
! TCACATAATTTGTGCACTAC+TGG + chr6_2:12768574-12768593 Msa0909720:intron 35.0%
! ATAATTTGTGCACTACTGGT+TGG + chr6_2:12768578-12768597 Msa0909720:intron 35.0%
AGCTACTATTTGTAGCTTCA+TGG - chr6_2:12768657-12768676 None:intergenic 35.0%
TAACTCGGAAGGAATATAAG+CGG - chr6_2:12768814-12768833 None:intergenic 35.0%
CAACTCCACATAATATCGTA+TGG + chr6_2:12768891-12768910 Msa0909720:intron 35.0%
TCACTCCATACGATATTATG+TGG - chr6_2:12768899-12768918 None:intergenic 35.0%
TCCTTATGTTACTGTAGGAA+TGG + chr6_2:12768954-12768973 Msa0909720:intron 35.0%
CCTTATGTTACTGTAGGAAT+GGG + chr6_2:12768955-12768974 Msa0909720:intron 35.0%
CTTATGTTACTGTAGGAATG+GGG + chr6_2:12768956-12768975 Msa0909720:intron 35.0%
AAATATGCGGTGAAAGTTAG+AGG - chr6_2:12769066-12769085 None:intergenic 35.0%
! TTCTATTTCTCGTTCTATGC+AGG + chr6_2:12769159-12769178 Msa0909720:intron 35.0%
CAGCTGTAACAAGAATATGT+GGG - chr6_2:12769201-12769220 None:intergenic 35.0%
CTTGTTACAGCTGGATTAAA+TGG + chr6_2:12769208-12769227 Msa0909720:CDS 35.0%
AAAGTTCGTGGCAAAATTGA+GGG + chr6_2:12769373-12769392 Msa0909720:CDS 35.0%
! CTGTTGTTTAAATGTGAGCT+TGG + chr6_2:12769419-12769438 Msa0909720:CDS 35.0%
!!! TTCTTTTGTTTTGGTTACGG+TGG + chr6_2:12769541-12769560 Msa0909720:intron 35.0%
!!! TCTTTTGTTTTGGTTACGGT+GGG + chr6_2:12769542-12769561 Msa0909720:intron 35.0%
!!! TCCCTATTTTTAAGGTTCCT+TGG - chr6_2:12769706-12769725 None:intergenic 35.0%
! AGTTTTCCCAAAGAAAATGG+TGG - chr6_2:12769783-12769802 None:intergenic 35.0%
ACACACCCTTAGTTTAATGA+AGG + chr6_2:12769922-12769941 Msa0909720:intron 35.0%
! GTTATGGACTTTTACAGCTA+AGG + chr6_2:12770014-12770033 Msa0909720:intron 35.0%
CATCAAGTATCTCACATCAT+AGG - chr6_2:12770520-12770539 None:intergenic 35.0%
CTATGATGTGAGATACTTGA+TGG + chr6_2:12770518-12770537 Msa0909720:three_prime_UTR 35.0%
! ATGTGAGATACTTGATGGTA+TGG + chr6_2:12770523-12770542 Msa0909720:three_prime_UTR 35.0%
GTTACATTGCCATCAATTTC+AGG + chr6_2:12770549-12770568 Msa0909720:three_prime_UTR 35.0%
TAGGAAAGTCCTGAAATTGA+TGG - chr6_2:12770561-12770580 None:intergenic 35.0%
AAAACAAGTGAGTGAGTGAG+TGG + chr6_2:12762769-12762788 Msa0909720:intron 40.0%
AAAAGCAGTGAAAGCGAAAG+AGG - chr6_2:12763218-12763237 None:intergenic 40.0%
GACACTGTGAATGAAGCTTA+TGG + chr6_2:12763279-12763298 Msa0909720:intron 40.0%
GACGAAAACTGCCTATGAAA+TGG + chr6_2:12763456-12763475 Msa0909720:intron 40.0%
TCCAAACAGACCCATTTCAT+AGG - chr6_2:12763470-12763489 None:intergenic 40.0%
GCTGTTCTGTGAGATTGTTT+GGG - chr6_2:12763697-12763716 None:intergenic 40.0%
AGCTGTTCTGTGAGATTGTT+TGG - chr6_2:12763698-12763717 None:intergenic 40.0%
ACATAAGGCCTGTTTGGATT+AGG - chr6_2:12763751-12763770 None:intergenic 40.0%
CTTATGACATAAGGCCTGTT+TGG - chr6_2:12763757-12763776 None:intergenic 40.0%
!! GAGAGTGTTCATTGTGCAAA+TGG + chr6_2:12763945-12763964 Msa0909720:intron 40.0%
CAGCACGAATACTACAGTAT+CGG + chr6_2:12764362-12764381 Msa0909720:CDS 40.0%
TATTCTTAGACCTGACAAGG+TGG + chr6_2:12764675-12764694 Msa0909720:intron 40.0%
ATTCTTAGACCTGACAAGGT+GGG + chr6_2:12764676-12764695 Msa0909720:intron 40.0%
ATCAGCCAGAAACTTATGTC+CGG - chr6_2:12764914-12764933 None:intergenic 40.0%
GCAGCTTCAGAAAAGAATGA+AGG + chr6_2:12765080-12765099 Msa0909720:intron 40.0%
!! CACCTTGTCTTGTTTCAACA+TGG + chr6_2:12765161-12765180 Msa0909720:intron 40.0%
GGCGAAAAACACAAGGAAAT+TGG - chr6_2:12765246-12765265 None:intergenic 40.0%
! TTTAAGACCTTCTTCAGGCT+TGG - chr6_2:12765558-12765577 None:intergenic 40.0%
TTCTTATTCCCCACAGAGAA+AGG + chr6_2:12765717-12765736 Msa0909720:CDS 40.0%
TTTGCGTTACCTTTCTCTGT+GGG - chr6_2:12765729-12765748 None:intergenic 40.0%
ATTTGCGTTACCTTTCTCTG+TGG - chr6_2:12765730-12765749 None:intergenic 40.0%
GTTCACTGTATAAACTGCGT+TGG - chr6_2:12766002-12766021 None:intergenic 40.0%
GTTTATCACCTTCCATCTGT+TGG + chr6_2:12766251-12766270 Msa0909720:CDS 40.0%
CCACTTTCAAGACTTCTTAG+CGG - chr6_2:12766281-12766300 None:intergenic 40.0%
AAGAAGTCTTGAAAGTGGTC+AGG + chr6_2:12766283-12766302 Msa0909720:CDS 40.0%
TCATAGTCATAAACAGAGGG+AGG - chr6_2:12766404-12766423 None:intergenic 40.0%
TCCTATTGTTCTCAGGTTCT+CGG + chr6_2:12766668-12766687 Msa0909720:CDS 40.0%
! CGAGCTTCACAAGATCTTTT+CGG - chr6_2:12766778-12766797 None:intergenic 40.0%
AAAGATCTTGTGAAGCTCGA+TGG + chr6_2:12766779-12766798 Msa0909720:CDS 40.0%
CCGTAGCCATAAAGTAGTAA+TGG - chr6_2:12766812-12766831 None:intergenic 40.0%
GGTAAACCTTTCTCTGTCTT+AGG + chr6_2:12767003-12767022 Msa0909720:intron 40.0%
TATGTTCCCTCTGTGGTATA+TGG + chr6_2:12767188-12767207 Msa0909720:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG + chr6_2:12767189-12767208 Msa0909720:intron 40.0%
! TTTTAGTCAGCCTGTTCCTT+TGG + chr6_2:12767219-12767238 Msa0909720:intron 40.0%
ACTTATGCAACCAAAGGAAC+AGG - chr6_2:12767232-12767251 None:intergenic 40.0%
GCATATCTGTGGACAATTTG+AGG - chr6_2:12767333-12767352 None:intergenic 40.0%
! ATCCCAGTTTCAAGTCATCA+AGG + chr6_2:12767357-12767376 Msa0909720:CDS 40.0%
! AGCCTTGATGACTTGAAACT+GGG - chr6_2:12767362-12767381 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG - chr6_2:12767363-12767382 None:intergenic 40.0%
AGGCTTTCATTGTTAGATCG+AGG + chr6_2:12767377-12767396 Msa0909720:CDS 40.0%
ACAGCAGCCTTGAATAAATC+CGG - chr6_2:12767617-12767636 None:intergenic 40.0%
!! AACATCCACAAAAGGTACTC+CGG - chr6_2:12767642-12767661 None:intergenic 40.0%
GTTGTCACAACATCCACAAA+AGG - chr6_2:12767650-12767669 None:intergenic 40.0%
! CGTTTTCTTGTGCTTCCTAA+AGG - chr6_2:12767869-12767888 None:intergenic 40.0%
!! CTGTTAGGGGAGTATTCATT+TGG - chr6_2:12767941-12767960 None:intergenic 40.0%
GTCAACCAAGTCATCTCATA+TGG - chr6_2:12768177-12768196 None:intergenic 40.0%
! TGTCACTTAATATGGGACAG+AGG + chr6_2:12768395-12768414 Msa0909720:intron 40.0%
GTCACTTAATATGGGACAGA+GGG + chr6_2:12768396-12768415 Msa0909720:intron 40.0%
AATACAGCAGTAACATGCCA+GGG - chr6_2:12768505-12768524 None:intergenic 40.0%
TAATACAGCAGTAACATGCC+AGG - chr6_2:12768506-12768525 None:intergenic 40.0%
ACTCACATACTTAACTCGGA+AGG - chr6_2:12768825-12768844 None:intergenic 40.0%
CCCATTCCTACAGTAACATA+AGG - chr6_2:12768958-12768977 None:intergenic 40.0%
AAGTAGAATTCCTCCTTCCT+AGG - chr6_2:12768986-12769005 None:intergenic 40.0%
CTCTGTAAGGAATGGTTACT+AGG + chr6_2:12769115-12769134 Msa0909720:intron 40.0%
CCAGCTGTAACAAGAATATG+TGG - chr6_2:12769202-12769221 None:intergenic 40.0%
CCACATATTCTTGTTACAGC+TGG + chr6_2:12769199-12769218 Msa0909720:CDS 40.0%
TGGTAAGCATACCTGATTCT+TGG + chr6_2:12769228-12769247 Msa0909720:intron 40.0%
GTTCAGAATACAGAACACGT+GGG - chr6_2:12769349-12769368 None:intergenic 40.0%
! AATTTTGCCACGAACTTTGC+AGG - chr6_2:12769371-12769390 None:intergenic 40.0%
CAAAGTTCGTGGCAAAATTG+AGG + chr6_2:12769372-12769391 Msa0909720:CDS 40.0%
!! TTTAAATGTGAGCTTGGTGC+TGG + chr6_2:12769425-12769444 Msa0909720:CDS 40.0%
!! TGCTGGACATTTTTCGAAGT+CGG + chr6_2:12769442-12769461 Msa0909720:CDS 40.0%
! TGGGAGAAATGGGAAGTTTT+AGG + chr6_2:12769561-12769580 Msa0909720:intron 40.0%
! GGGAGAAATGGGAAGTTTTA+GGG + chr6_2:12769562-12769581 Msa0909720:intron 40.0%
! GGGAAAACTTTTCTATTCCC+AGG + chr6_2:12769794-12769813 Msa0909720:intron 40.0%
! TCCCAGGAACATTTTATACC+CGG + chr6_2:12769810-12769829 Msa0909720:intron 40.0%
!! CTAGGAAGCATCTTAGAAGA+TGG - chr6_2:12770088-12770107 None:intergenic 40.0%
!! CATCTTCTAAGATGCTTCCT+AGG + chr6_2:12770086-12770105 Msa0909720:intron 40.0%
CTGTGAAGAGATGGAATGAT+TGG + chr6_2:12770439-12770458 Msa0909720:three_prime_UTR 40.0%
!! TGCTGGTTTCACTTAAGCTA+TGG - chr6_2:12770470-12770489 None:intergenic 40.0%
AGGCTTAGAAGTTAGAACCA+GGG - chr6_2:12770500-12770519 None:intergenic 40.0%
TAGGCTTAGAAGTTAGAACC+AGG - chr6_2:12770501-12770520 None:intergenic 40.0%
AGGAAGAGAAAGAGTGAGGA+CGG - chr6_2:12762922-12762941 None:intergenic 45.0%
TGAGACTGTGACAGAGATTG+CGG - chr6_2:12762999-12763018 None:intergenic 45.0%
GAAGAAGGTCGAGCACAAAA+TGG + chr6_2:12763043-12763062 Msa0909720:CDS 45.0%
! ATAGGAAAGCACATCGGGAT+CGG - chr6_2:12763126-12763145 None:intergenic 45.0%
! ACGGAGATAGGAAAGCACAT+CGG - chr6_2:12763132-12763151 None:intergenic 45.0%
! GATACCTGACATGACGGAAT+CGG - chr6_2:12763171-12763190 None:intergenic 45.0%
GCCTATGAAATGGGTCTGTT+TGG + chr6_2:12763466-12763485 Msa0909720:intron 45.0%
GTTCTCTTAAACAGTGTCGC+AGG + chr6_2:12763789-12763808 Msa0909720:intron 45.0%
AACAGTGTAACGTGCTGAGT+AGG + chr6_2:12763987-12764006 Msa0909720:intron 45.0%
TAATAAGGCCCTTTGCGTAC+GGG - chr6_2:12764185-12764204 None:intergenic 45.0%
GTAATAAGGCCCTTTGCGTA+CGG - chr6_2:12764186-12764205 None:intergenic 45.0%
!! GGCATGGTGTCATTAACAGA+TGG - chr6_2:12764284-12764303 None:intergenic 45.0%
GTTAATGACACCATGCCTAC+AGG + chr6_2:12764287-12764306 Msa0909720:CDS 45.0%
!! TCCTCCGGAGCATGTTATTT+TGG + chr6_2:12764319-12764338 Msa0909720:CDS 45.0%
TCCAAAATAACATGCTCCGG+AGG - chr6_2:12764323-12764342 None:intergenic 45.0%
GCATATGCAGAAGACACCAA+AGG + chr6_2:12764523-12764542 Msa0909720:CDS 45.0%
ATCGAGACTCAAGCTCCAAT+TGG + chr6_2:12764577-12764596 Msa0909720:CDS 45.0%
ACATCAAACCTTGAATGGGC+TGG + chr6_2:12764619-12764638 Msa0909720:CDS 45.0%
TTTCAATCTGCAGCCGAAAC+TGG + chr6_2:12764866-12764885 Msa0909720:intron 45.0%
CAAAGCCGGACATAAGTTTC+TGG + chr6_2:12764906-12764925 Msa0909720:intron 45.0%
GAAGTGAGGCGAAAAACACA+AGG - chr6_2:12765253-12765272 None:intergenic 45.0%
GCTAACGCCTTAAGTGATAC+AGG + chr6_2:12765370-12765389 Msa0909720:intron 45.0%
AGCCATGCCTGTATCACTTA+AGG - chr6_2:12765380-12765399 None:intergenic 45.0%
TCTTGTTCTCGGAAGCTTCA+AGG - chr6_2:12765475-12765494 None:intergenic 45.0%
GATGTTTCCAAGCCTGAAGA+AGG + chr6_2:12765548-12765567 Msa0909720:CDS 45.0%
!! GTTTTGACACAACGTGTGGA+TGG + chr6_2:12765578-12765597 Msa0909720:CDS 45.0%
TTGCGTTACCTTTCTCTGTG+GGG - chr6_2:12765728-12765747 None:intergenic 45.0%
!! CGTGCTTGGCTTTTGAATGT+GGG + chr6_2:12765814-12765833 Msa0909720:intron 45.0%
!! GTGCTTGGCTTTTGAATGTG+GGG + chr6_2:12765815-12765834 Msa0909720:intron 45.0%
! CTTTTGAATGTGGGGTCACT+GGG + chr6_2:12765823-12765842 Msa0909720:intron 45.0%
CCGCTAAGAAGTCTTGAAAG+TGG + chr6_2:12766278-12766297 Msa0909720:CDS 45.0%
AAGTCTTGAAAGTGGTCAGG+TGG + chr6_2:12766286-12766305 Msa0909720:CDS 45.0%
TCCGAGAACCTGAGAACAAT+AGG - chr6_2:12766672-12766691 None:intergenic 45.0%
TATTGTTCTCAGGTTCTCGG+AGG + chr6_2:12766671-12766690 Msa0909720:CDS 45.0%
AATACGTCACTGAAAGGCAG+TGG + chr6_2:12766708-12766727 Msa0909720:CDS 45.0%
ATACGTCACTGAAAGGCAGT+GGG + chr6_2:12766709-12766728 Msa0909720:CDS 45.0%
! TTATGGCTACGGGTCTTATG+AGG + chr6_2:12766820-12766839 Msa0909720:CDS 45.0%
! TGTGGACAATTTGAGGTCAC+TGG - chr6_2:12767326-12767345 None:intergenic 45.0%
CTGGGATCTATGCATATCTG+TGG - chr6_2:12767344-12767363 None:intergenic 45.0%
GTTATAGCTCATATACGCGG+AGG + chr6_2:12767410-12767429 Msa0909720:CDS 45.0%
! TGCATAAATGGCAGAAGTGC+TGG + chr6_2:12767557-12767576 Msa0909720:CDS 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG + chr6_2:12767558-12767577 Msa0909720:CDS 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG + chr6_2:12767559-12767578 Msa0909720:CDS 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG + chr6_2:12767560-12767579 Msa0909720:CDS 45.0%
TTATTCAAGGCTGCTGTTGC+CGG + chr6_2:12767620-12767639 Msa0909720:CDS 45.0%
TGTCACTGCCAAAGATGCAT+TGG + chr6_2:12767905-12767924 Msa0909720:intron 45.0%
CCAAGTCATCTCATATGGGA+CGG - chr6_2:12768172-12768191 None:intergenic 45.0%
AGAAATCACAGCTACATCCC+TGG + chr6_2:12768485-12768504 Msa0909720:intron 45.0%
AGCATACCTGATTCTTGGCT+CGG + chr6_2:12769233-12769252 Msa0909720:intron 45.0%
ATAGTTCCGAGCCAAGAATC+AGG - chr6_2:12769242-12769261 None:intergenic 45.0%
GGTTCAGAATACAGAACACG+TGG - chr6_2:12769350-12769369 None:intergenic 45.0%
TTCTGAACCTGCAAAGTTCG+TGG + chr6_2:12769361-12769380 Msa0909720:CDS 45.0%
!! GCTGGACATTTTTCGAAGTC+GGG + chr6_2:12769443-12769462 Msa0909720:CDS 45.0%
!! GACATTTTTCGAAGTCGGGA+AGG + chr6_2:12769447-12769466 Msa0909720:CDS 45.0%
TTTGGTTACGGTGGGAGAAA+TGG + chr6_2:12769550-12769569 Msa0909720:intron 45.0%
TTGGTTACGGTGGGAGAAAT+GGG + chr6_2:12769551-12769570 Msa0909720:intron 45.0%
CCCGGGTATAAAATGTTCCT+GGG - chr6_2:12769814-12769833 None:intergenic 45.0%
! CCCAGGAACATTTTATACCC+GGG + chr6_2:12769811-12769830 Msa0909720:intron 45.0%
TCCCGGGTATAAAATGTTCC+TGG - chr6_2:12769815-12769834 None:intergenic 45.0%
CTTCACAGCATCCACACTTT+AGG - chr6_2:12770427-12770446 None:intergenic 45.0%
! AAGGACCCACGCTTTGTTAA+TGG + chr6_2:12770653-12770672 Msa0909720:three_prime_UTR 45.0%
GGATGCCATTAACAAAGCGT+GGG - chr6_2:12770661-12770680 None:intergenic 45.0%
TGGATGCCATTAACAAAGCG+TGG - chr6_2:12770662-12770681 None:intergenic 45.0%
!!! GTAATTTTTATTTTATTTAT+TGG - chr6_2:12762826-12762845 None:intergenic 5.0%
!!! TTTTAAATAAAATAAAAACA+GGG - chr6_2:12764463-12764482 None:intergenic 5.0%
!!! ATTTTAAATAAAATAAAAAC+AGG - chr6_2:12764464-12764483 None:intergenic 5.0%
!! AAATATTTAATAAAACTATA+AGG + chr6_2:12766544-12766563 Msa0909720:intron 5.0%
!! ATTACTATTATAATTATTAT+AGG + chr6_2:12766589-12766608 Msa0909720:intron 5.0%
!!! GTAATTTTATTTATATAATT+TGG + chr6_2:12770295-12770314 Msa0909720:intron 5.0%
AAGTGAGTGAGTGAGTGGAG+TGG + chr6_2:12762774-12762793 Msa0909720:intron 50.0%
GTGAGGACGGAAACAGTTAG+TGG - chr6_2:12762909-12762928 None:intergenic 50.0%
GATCGGAGCGAGAATCATCA+CGG - chr6_2:12763109-12763128 None:intergenic 50.0%
! CGGAGATAGGAAAGCACATC+GGG - chr6_2:12763131-12763150 None:intergenic 50.0%
!! TACACCGATTCCGTCATGTC+AGG + chr6_2:12763164-12763183 Msa0909720:CDS 50.0%
ATCCACGCAACTTGCATGTG+TGG + chr6_2:12763256-12763275 Msa0909720:intron 50.0%
TCCACGCAACTTGCATGTGT+GGG + chr6_2:12763257-12763276 Msa0909720:intron 50.0%
CTGACAAGAGGCTCTCCAAT+TGG - chr6_2:12764595-12764614 None:intergenic 50.0%
CATCATCACCAGCCCATTCA+AGG - chr6_2:12764630-12764649 None:intergenic 50.0%
AGGAGAATTCCCACCTTGTC+AGG - chr6_2:12764688-12764707 None:intergenic 50.0%
CGCCTTAAGTGATACAGGCA+TGG + chr6_2:12765375-12765394 Msa0909720:intron 50.0%
!! GCGTGCTTGGCTTTTGAATG+TGG + chr6_2:12765813-12765832 Msa0909720:intron 50.0%
! GCTTTTGAATGTGGGGTCAC+TGG + chr6_2:12765822-12765841 Msa0909720:intron 50.0%
CTTAGCGGTTCACCAACAGA+TGG - chr6_2:12766266-12766285 None:intergenic 50.0%
CAGGCTCCTAAGACAGAGAA+AGG - chr6_2:12767012-12767031 None:intergenic 50.0%
TAGCGCCCATATACCACAGA+GGG - chr6_2:12767197-12767216 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG - chr6_2:12767198-12767217 None:intergenic 50.0%
ATAGCTCATATACGCGGAGG+TGG + chr6_2:12767413-12767432 Msa0909720:CDS 50.0%
TATACGCGGAGGTGGTGAAA+TGG + chr6_2:12767421-12767440 Msa0909720:CDS 50.0%
ATACGCGGAGGTGGTGAAAT+GGG + chr6_2:12767422-12767441 Msa0909720:CDS 50.0%
GGAGGCAGTGGTATGAGAAT+GGG + chr6_2:12767444-12767463 Msa0909720:CDS 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG + chr6_2:12767572-12767591 Msa0909720:CDS 50.0%
!! TGTTGCCGGAGTACCTTTTG+TGG + chr6_2:12767634-12767653 Msa0909720:CDS 50.0%
GTCATCTCATATGGGACGGA+GGG - chr6_2:12768168-12768187 None:intergenic 50.0%
AGTCATCTCATATGGGACGG+AGG - chr6_2:12768169-12768188 None:intergenic 50.0%
CCGTCCCATATGAGATGACT+TGG + chr6_2:12768169-12768188 Msa0909720:intron 50.0%
CCAGCAGTGTGACAGTGAAT+GGG - chr6_2:12768449-12768468 None:intergenic 50.0%
TGTAGGAATGGGGTGATCCT+AGG + chr6_2:12768966-12768985 Msa0909720:intron 50.0%
CGTGGGTCTACAGAATGTAC+AGG - chr6_2:12769332-12769351 None:intergenic 50.0%
GTCTTGGGATGCCTAAAGTG+TGG + chr6_2:12770413-12770432 Msa0909720:exon 50.0%
GTGTGGATGCTGTGAAGAGA+TGG + chr6_2:12770430-12770449 Msa0909720:three_prime_UTR 50.0%
GAAACCAGCAGCATATACCC+TGG + chr6_2:12770480-12770499 Msa0909720:three_prime_UTR 50.0%
AGAACCAGGGTATATGCTGC+TGG - chr6_2:12770487-12770506 None:intergenic 50.0%
AGTGAGTGAGTGGAGTGGAG+TGG + chr6_2:12762779-12762798 Msa0909720:intron 55.0%
GAGGTGAAGTCGTCATCGGA+CGG - chr6_2:12762977-12762996 None:intergenic 55.0%
TGCGGAGGTGAAGTCGTCAT+CGG - chr6_2:12762981-12763000 None:intergenic 55.0%
GACTGTGACAGAGATTGCGG+AGG - chr6_2:12762996-12763015 None:intergenic 55.0%
TCATTCTCCGCTTCCTCCTC+CGG + chr6_2:12763016-12763035 Msa0909720:CDS 55.0%
TCCCACACATGCAAGTTGCG+TGG - chr6_2:12763261-12763280 None:intergenic 55.0%
ATATCGGCACCCGTACGCAA+AGG + chr6_2:12764173-12764192 Msa0909720:CDS 55.0%
TATCGGCACCCGTACGCAAA+GGG + chr6_2:12764174-12764193 Msa0909720:CDS 55.0%
AGCATCAGGTCCTGTAGGCA+TGG - chr6_2:12764300-12764319 None:intergenic 55.0%
TACAGGACCTGATGCTCCTC+CGG + chr6_2:12764304-12764323 Msa0909720:CDS 55.0%
CAGGCATGGCTTCATGCGTT+AGG + chr6_2:12765389-12765408 Msa0909720:intron 55.0%
GACACTACTGTCAGCCATCG+TGG + chr6_2:12765605-12765624 Msa0909720:CDS 55.0%
GCGGTTCACCAACAGATGGA+AGG - chr6_2:12766262-12766281 None:intergenic 55.0%
TACGCGGAGGTGGTGAAATG+GGG + chr6_2:12767423-12767442 Msa0909720:CDS 55.0%
GGGAGGCAGTGGTATGAGAA+TGG + chr6_2:12767443-12767462 Msa0909720:CDS 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG + chr6_2:12767575-12767594 Msa0909720:CDS 55.0%
CATATGGGACGGAGGGAGTA+AGG - chr6_2:12768161-12768180 None:intergenic 55.0%
CCCATTCACTGTCACACTGC+TGG + chr6_2:12768446-12768465 Msa0909720:intron 55.0%
GCCAGCAGTGTGACAGTGAA+TGG - chr6_2:12768450-12768469 None:intergenic 55.0%
GGAATGGGGTGATCCTAGGA+AGG + chr6_2:12768970-12768989 Msa0909720:intron 55.0%
ATGGGGTGATCCTAGGAAGG+AGG + chr6_2:12768973-12768992 Msa0909720:CDS 55.0%
!! AACGCGGCGGTGGTGGAAAA+AGG - chr6_2:12762942-12762961 None:intergenic 60.0%
GTGAAGTCGTCATCGGACGG+CGG - chr6_2:12762974-12762993 None:intergenic 60.0%
TGCTCGACCTTCTTCGCCAC+CGG - chr6_2:12763038-12763057 None:intergenic 60.0%
!! GGAGGAGCATCAGGTCCTGT+AGG - chr6_2:12764305-12764324 None:intergenic 60.0%
!! ACATGCTCCGGAGGAGCATC+AGG - chr6_2:12764314-12764333 None:intergenic 60.0%
CAGTGGGCACGTGCTTCAGA+TGG + chr6_2:12766725-12766744 Msa0909720:CDS 60.0%
GTGGTGAAATGGGGAGGCAG+TGG + chr6_2:12767432-12767451 Msa0909720:CDS 60.0%
TGGGACGGAGGGAGTAAGGA+AGG - chr6_2:12768157-12768176 None:intergenic 60.0%
ACGGCGGTGGTGAGAGAACG+CGG - chr6_2:12762958-12762977 None:intergenic 65.0%
AAGTCGTCATCGGACGGCGG+TGG - chr6_2:12762971-12762990 None:intergenic 65.0%
TTCTCCGCTTCCTCCTCCGG+TGG + chr6_2:12763019-12763038 Msa0909720:CDS 65.0%
TTCGCCACCGGAGGAGGAAG+CGG - chr6_2:12763026-12763045 None:intergenic 65.0%
TCCTCCTCCGGTGGCGAAGA+AGG + chr6_2:12763028-12763047 Msa0909720:CDS 65.0%
ACCTTCTTCGCCACCGGAGG+AGG - chr6_2:12763032-12763051 None:intergenic 65.0%
TCGACCTTCTTCGCCACCGG+AGG - chr6_2:12763035-12763054 None:intergenic 65.0%
GCGGAGGTGGTGAAATGGGG+AGG + chr6_2:12767426-12767445 Msa0909720:CDS 65.0%
GTGAGAGAACGCGGCGGTGG+TGG - chr6_2:12762949-12762968 None:intergenic 70.0%
GTGGTGAGAGAACGCGGCGG+TGG - chr6_2:12762952-12762971 None:intergenic 70.0%
GCGGTGGTGAGAGAACGCGG+CGG - chr6_2:12762955-12762974 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 12762697 12770782 12762697 ID=Msa0909720;Name=Msa0909720
chr6_2 mRNA 12762697 12770782 12762697 ID=Msa0909720-mRNA-1;Parent=Msa0909720;Name=Msa0909720-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|0.90|0.91|1|0.90|0.83|12|369|787
chr6_2 exon 12762697 12762779 12762697 ID=Msa0909720-mRNA-1:exon:2867;Parent=Msa0909720-mRNA-1
chr6_2 exon 12762801 12763185 12762801 ID=Msa0909720-mRNA-1:exon:2868;Parent=Msa0909720-mRNA-1
chr6_2 exon 12764111 12764394 12764111 ID=Msa0909720-mRNA-1:exon:2869;Parent=Msa0909720-mRNA-1
chr6_2 exon 12764499 12764693 12764499 ID=Msa0909720-mRNA-1:exon:2870;Parent=Msa0909720-mRNA-1
chr6_2 exon 12765392 12765738 12765392 ID=Msa0909720-mRNA-1:exon:2871;Parent=Msa0909720-mRNA-1
chr6_2 exon 12766172 12766463 12766172 ID=Msa0909720-mRNA-1:exon:2872;Parent=Msa0909720-mRNA-1
chr6_2 exon 12766611 12766841 12766611 ID=Msa0909720-mRNA-1:exon:2873;Parent=Msa0909720-mRNA-1
chr6_2 exon 12767347 12767712 12767347 ID=Msa0909720-mRNA-1:exon:2874;Parent=Msa0909720-mRNA-1
chr6_2 exon 12768971 12769036 12768971 ID=Msa0909720-mRNA-1:exon:2875;Parent=Msa0909720-mRNA-1
chr6_2 exon 12769181 12769229 12769181 ID=Msa0909720-mRNA-1:exon:2876;Parent=Msa0909720-mRNA-1
chr6_2 exon 12769345 12769468 12769345 ID=Msa0909720-mRNA-1:exon:2877;Parent=Msa0909720-mRNA-1
chr6_2 exon 12770338 12770782 12770338 ID=Msa0909720-mRNA-1:exon:2878;Parent=Msa0909720-mRNA-1
chr6_2 five_prime_UTR 12762697 12762779 12762697 ID=Msa0909720-mRNA-1:five_prime_utr;Parent=Msa0909720-mRNA-1
chr6_2 five_prime_UTR 12762801 12762851 12762801 ID=Msa0909720-mRNA-1:five_prime_utr;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12762852 12763185 12762852 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12764111 12764394 12764111 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12764499 12764693 12764499 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12765392 12765738 12765392 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12766172 12766463 12766172 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12766611 12766841 12766611 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12767347 12767712 12767347 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12768971 12769036 12768971 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12769181 12769229 12769181 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12769345 12769468 12769345 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 CDS 12770338 12770413 12770338 ID=Msa0909720-mRNA-1:cds;Parent=Msa0909720-mRNA-1
chr6_2 three_prime_UTR 12770414 12770782 12770414 ID=Msa0909720-mRNA-1:three_prime_utr;Parent=Msa0909720-mRNA-1
Gene Sequence

>Msa0909720

ATGCTAAATCAAAATCTTGTTCGCTTAAACATTAGTCGATTATTCTGCTGCATTCCACTAACTGTTTCCGTCCTCACTCTTTCTCTTCCTTTTTCCACCACCGCCGCGTTCTCTCACCACCGCCGTCCGATGACGACTTCACCTCCGCAATCTCTGTCACAGTCTCATTCTCCGCTTCCTCCTCCGGTGGCGAAGAAGGTCGAGCACAAAATGGAGCTTTTCAATGATGTTAGAATCGATAACTACTACTGGCTCCGTGATGATTCTCGCTCCGATCCCGATGTGCTTTCCTATCTCCGTCAAGAAAATGATTACACCGATTCCGTCATGTCAGGAACCAAAAAAATTGAAGATAAGCTTTTTGCTGAGATAAAAGGAAGGATAAAGGAGGAAGATATATCGGCACCCGTACGCAAAGGGCCTTATTACTATTATAAGAAAACATTGGAAGGAAAGGAGTATGTTCAATATTGTAGACGCCTTATATCTGATAACCAAAAGGTTCCATCTGTTAATGACACCATGCCTACAGGACCTGATGCTCCTCCGGAGCATGTTATTTTGGATGAGAATATCAAGGCACAACAGCACGAATACTACAGTATCGGTACTTTTAAGGTTAGCCCAAATAACAAGTTAGTAGCATATGCAGAAGACACCAAAGGAGATGAAATATATACTGTTTATGTCATGAATATCGAGACTCAAGCTCCAATTGGAGAGCCTCTTGTCAGTGTAACATCAAACCTTGAATGGGCTGGTGATGATGCTCTAGTTTATGTAACAATGGATAATATTCTTAGACCTGACAAGGCATGGCTTCATGCGTTAGGAACAAAACAATCAAAAGATACTTGTCTTTACGAGGAAAAAGATGATACGTTTTCTCTTGACCTTGAAGCTTCCGAGAACAAGAAATATTTGTTTGTTGCATCGGAAAGTAAAACTACAAGGTTCAATTTTTATCTTGATGTTTCCAAGCCTGAAGAAGGTCTTAAAGTTTTGACACAACGTGTGGATGGTATTGACACTACTGTCAGCCATCGTGGAGATCATTTCTTTATTAAGCGGAGAAGTGATCAATTTTTCAATTCAGAAGTTGTAGCATGTGCTGTTAACAACACCTCTTCAACTACAGTTCTTATTCCCCACAGAGAAAGTGTGAAAATTCAGGAGATACAACTTTTTAGCGATCATCTTGTTGCATATGAGAGAGAAAATGGTCTACCAAAAATAATTGTTTATCACCTTCCATCTGTTGGTGAACCGCTAAGAAGTCTTGAAAGTGGTCAGGTGGTTAGTTTTATTGATCCAGTATACTATGTGGATTCTTCAGAGTCAGAGTTTTCGTCAAGTATTTTACGATTTTCATATAGCTCATTGAAGACGCCTCCCTCTGTTTATGACTATGATATGAAGGCTGGAATTTCAGTTTTGAAGAAGATTGACTCGGTTTTCCTCATTTCCTTGAGTTTTGTTCAATTGCTCTCTATACCTGTATTATTTGTCTCCTATTGTTCTCAGGTTCTCGGAGGTTTTGATGCAACAAAATACGTCACTGAAAGGCAGTGGGCACGTGCTTCAGATGGAACTTTGATTCCCATGTCACTTGTATACCGAAAAGATCTTGTGAAGCTCGATGGATCAGATCCATTACTACTTTATGGCTACGGGTCTTATGAGATATGCATAGATCCCAGTTTCAAGTCATCAAGGCTTTCATTGTTAGATCGAGGTTTCATATATGTTATAGCTCATATACGCGGAGGTGGTGAAATGGGGAGGCAGTGGTATGAGAATGGGAAGCTGCTGAAGAAAAAGAACACTTTCACTGATTTTATTGCATGTGCTGAACATTTAATTGAAAAAAAATTCTGTTCCAAGGAAAGACTTTGCATAAATGGCAGAAGTGCTGGGGGTTTGCTAATTGGTGGAGTTCTTAATATGAGACCGGATTTATTCAAGGCTGCTGTTGCCGGAGTACCTTTTGTGGATGTTGTGACAACAATGCTTGATCCAACTATTCCTCTCACTACTTCCGAATGGGAGGAATGGGGTGATCCTAGGAAGGAGGAATTCTACTTCTACATGAAGTCATATTCCCCTGTTGATAATGTCAAAGCACAGAATTACCCACATATTCTTGTTACAGCTGGATTAAATGACCCACGTGTTCTGTATTCTGAACCTGCAAAGTTCGTGGCAAAATTGAGGGATATGAAAACTGATGATAACATACTGTTGTTTAAATGTGAGCTTGGTGCTGGACATTTTTCGAAGTCGGGAAGATTTGAGAAACTTCAGGAAGACGCCTTCACTTATACATTCTTCCTAAAGACTCTAAACATGACTAATCATCTTTAG
Protein sequence

>Msa0909720

MLNQNLVRLNISRLFCCIPLTVSVLTLSLPFSTTAAFSHHRRPMTTSPPQSLSQSHSPLPPPVAKKVEHKMELFNDVRIDNYYWLRDDSRSDPDVLSYLRQENDYTDSVMSGTKKIEDKLFAEIKGRIKEEDISAPVRKGPYYYYKKTLEGKEYVQYCRRLISDNQKVPSVNDTMPTGPDAPPEHVILDENIKAQQHEYYSIGTFKVSPNNKLVAYAEDTKGDEIYTVYVMNIETQAPIGEPLVSVTSNLEWAGDDALVYVTMDNILRPDKAWLHALGTKQSKDTCLYEEKDDTFSLDLEASENKKYLFVASESKTTRFNFYLDVSKPEEGLKVLTQRVDGIDTTVSHRGDHFFIKRRSDQFFNSEVVACAVNNTSSTTVLIPHRESVKIQEIQLFSDHLVAYERENGLPKIIVYHLPSVGEPLRSLESGQVVSFIDPVYYVDSSESEFSSSILRFSYSSLKTPPSVYDYDMKAGISVLKKIDSVFLISLSFVQLLSIPVLFVSYCSQVLGGFDATKYVTERQWARASDGTLIPMSLVYRKDLVKLDGSDPLLLYGYGSYEICIDPSFKSSRLSLLDRGFIYVIAHIRGGGEMGRQWYENGKLLKKKNTFTDFIACAEHLIEKKFCSKERLCINGRSAGGLLIGGVLNMRPDLFKAAVAGVPFVDVVTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVLYSEPAKFVAKLRDMKTDDNILLFKCELGAGHFSKSGRFEKLQEDAFTYTFFLKTLNMTNHL*