Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792880 | XP_039690201.1 | 93.537 | 557 | 27 | 2 | 1 | 557 | 1 | 548 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792880 | sp|Q40546|KPYG_TOBAC | 82.340 | 470 | 83 | 0 | 87 | 556 | 92 | 561 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792880 | A0A396HMX9 | 93.537 | 557 | 27 | 2 | 1 | 557 | 1 | 548 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0792880 | 0.842030 | 3.315276e-58 | -8.615850e-47 |
| Msa0005690 | Msa0792880 | 0.836366 | 9.761065e-57 | -8.615850e-47 |
| Msa0012380 | Msa0792880 | 0.810282 | 1.245535e-50 | -8.615850e-47 |
| Msa0012780 | Msa0792880 | -0.815770 | 7.795678e-52 | -8.615850e-47 |
| Msa0014410 | Msa0792880 | 0.820486 | 6.688907e-53 | -8.615850e-47 |
| Msa0020320 | Msa0792880 | 0.819683 | 1.021287e-52 | -8.615850e-47 |
| Msa0021980 | Msa0792880 | 0.823639 | 1.242888e-53 | -8.615850e-47 |
| Msa0035110 | Msa0792880 | 0.827862 | 1.237471e-54 | -8.615850e-47 |
| Msa0036150 | Msa0792880 | 0.802357 | 5.831003e-49 | -8.615850e-47 |
| Msa0040420 | Msa0792880 | 0.804612 | 1.987364e-49 | -8.615850e-47 |
| Msa0040550 | Msa0792880 | -0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa0040780 | Msa0792880 | 0.844718 | 6.356374e-59 | -8.615850e-47 |
| Msa0047230 | Msa0792880 | 0.821887 | 3.178718e-53 | -8.615850e-47 |
| Msa0053960 | Msa0792880 | 0.849705 | 2.724282e-60 | -8.615850e-47 |
| Msa0064550 | Msa0792880 | 0.854858 | 9.304517e-62 | -8.615850e-47 |
| Msa0072830 | Msa0792880 | 0.839439 | 1.583548e-57 | -8.615850e-47 |
| Msa0072860 | Msa0792880 | 0.839345 | 1.675420e-57 | -8.615850e-47 |
| Msa0074220 | Msa0792880 | 0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0080810 | Msa0792880 | 0.809465 | 1.867277e-50 | -8.615850e-47 |
| Msa0083550 | Msa0792880 | 0.818391 | 2.008374e-52 | -8.615850e-47 |
| Msa0087130 | Msa0792880 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa0089010 | Msa0792880 | 0.831764 | 1.387464e-55 | -8.615850e-47 |
| Msa0091470 | Msa0792880 | 0.869044 | 4.156879e-66 | -8.615850e-47 |
| Msa0096510 | Msa0792880 | 0.829735 | 4.358566e-55 | -8.615850e-47 |
| Msa0104360 | Msa0792880 | 0.840954 | 6.367750e-58 | -8.615850e-47 |
| Msa0106110 | Msa0792880 | -0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0108070 | Msa0792880 | 0.812810 | 3.515037e-51 | -8.615850e-47 |
| Msa0109490 | Msa0792880 | 0.842279 | 2.849132e-58 | -8.615850e-47 |
| Msa0113640 | Msa0792880 | 0.802992 | 4.311639e-49 | -8.615850e-47 |
| Msa0114700 | Msa0792880 | 0.808670 | 2.762864e-50 | -8.615850e-47 |
| Msa0116470 | Msa0792880 | 0.839891 | 1.208320e-57 | -8.615850e-47 |
| Msa0116510 | Msa0792880 | 0.859346 | 4.407392e-63 | -8.615850e-47 |
| Msa0120320 | Msa0792880 | 0.817398 | 3.367332e-52 | -8.615850e-47 |
| Msa0604880 | Msa0792880 | 0.835644 | 1.488624e-56 | -8.615850e-47 |
| Msa0605250 | Msa0792880 | 0.824389 | 8.287804e-54 | -8.615850e-47 |
| Msa0608780 | Msa0792880 | 0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0610780 | Msa0792880 | 0.827466 | 1.540641e-54 | -8.615850e-47 |
| Msa0610810 | Msa0792880 | 0.830028 | 3.699202e-55 | -8.615850e-47 |
| Msa0615430 | Msa0792880 | 0.866795 | 2.195776e-65 | -8.615850e-47 |
| Msa0618260 | Msa0792880 | 0.812081 | 5.072403e-51 | -8.615850e-47 |
| Msa0622250 | Msa0792880 | 0.835364 | 1.752045e-56 | -8.615850e-47 |
| Msa0622690 | Msa0792880 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa0625440 | Msa0792880 | 0.824214 | 9.113017e-54 | -8.615850e-47 |
| Msa0627050 | Msa0792880 | 0.889963 | 1.511938e-73 | -8.615850e-47 |
| Msa0631950 | Msa0792880 | 0.812838 | 3.465187e-51 | -8.615850e-47 |
| Msa0633720 | Msa0792880 | 0.826867 | 2.143189e-54 | -8.615850e-47 |
| Msa0644630 | Msa0792880 | 0.804201 | 2.420442e-49 | -8.615850e-47 |
| Msa0646190 | Msa0792880 | 0.833564 | 4.961697e-56 | -8.615850e-47 |
| Msa0646340 | Msa0792880 | 0.851734 | 7.317259e-61 | -8.615850e-47 |
| Msa0649310 | Msa0792880 | 0.812432 | 4.253026e-51 | -8.615850e-47 |
| Msa0651310 | Msa0792880 | 0.833361 | 5.572534e-56 | -8.615850e-47 |
| Msa0654880 | Msa0792880 | 0.868120 | 8.268719e-66 | -8.615850e-47 |
| Msa0657860 | Msa0792880 | 0.846056 | 2.759621e-59 | -8.615850e-47 |
| Msa0662120 | Msa0792880 | 0.817040 | 4.051831e-52 | -8.615850e-47 |
| Msa0668160 | Msa0792880 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0675010 | Msa0792880 | 0.884132 | 2.489917e-71 | -8.615850e-47 |
| Msa0685000 | Msa0792880 | 0.833006 | 6.830976e-56 | -8.615850e-47 |
| Msa0685880 | Msa0792880 | 0.803258 | 3.798993e-49 | -8.615850e-47 |
| Msa0685890 | Msa0792880 | 0.825339 | 4.948604e-54 | -8.615850e-47 |
| Msa0693400 | Msa0792880 | 0.861497 | 9.845056e-64 | -8.615850e-47 |
| Msa0693500 | Msa0792880 | 0.811024 | 8.608834e-51 | -8.615850e-47 |
| Msa0698480 | Msa0792880 | 0.868928 | 4.532392e-66 | -8.615850e-47 |
| Msa0698650 | Msa0792880 | 0.874771 | 5.204681e-68 | -8.615850e-47 |
| Msa0702200 | Msa0792880 | 0.842380 | 2.679678e-58 | -8.615850e-47 |
| Msa0702310 | Msa0792880 | 0.805027 | 1.627804e-49 | -8.615850e-47 |
| Msa0702620 | Msa0792880 | 0.810592 | 1.067438e-50 | -8.615850e-47 |
| Msa0707040 | Msa0792880 | 0.804813 | 1.803879e-49 | -8.615850e-47 |
| Msa0709660 | Msa0792880 | 0.852699 | 3.889327e-61 | -8.615850e-47 |
| Msa0718920 | Msa0792880 | 0.818160 | 2.265625e-52 | -8.615850e-47 |
| Msa0727300 | Msa0792880 | 0.856935 | 2.298441e-62 | -8.615850e-47 |
| Msa0744490 | Msa0792880 | 0.829231 | 5.779890e-55 | -8.615850e-47 |
| Msa0744500 | Msa0792880 | 0.868999 | 4.301034e-66 | -8.615850e-47 |
| Msa0748330 | Msa0792880 | 0.827602 | 1.429116e-54 | -8.615850e-47 |
| Msa0748980 | Msa0792880 | 0.825320 | 4.999862e-54 | -8.615850e-47 |
| Msa0749150 | Msa0792880 | 0.991085 | 8.190113e-186 | -8.615850e-47 |
| Msa0752580 | Msa0792880 | 0.814240 | 1.703815e-51 | -8.615850e-47 |
| Msa0754500 | Msa0792880 | 0.810490 | 1.123125e-50 | -8.615850e-47 |
| Msa0761640 | Msa0792880 | 0.803192 | 3.919906e-49 | -8.615850e-47 |
| Msa0774560 | Msa0792880 | 0.804436 | 2.161908e-49 | -8.615850e-47 |
| Msa0775580 | Msa0792880 | 0.863248 | 2.850232e-64 | -8.615850e-47 |
| Msa0777500 | Msa0792880 | -0.805561 | 1.257742e-49 | -8.615850e-47 |
| Msa0788360 | Msa0792880 | 0.875471 | 3.001442e-68 | -8.615850e-47 |
| Msa0791120 | Msa0792880 | 0.833283 | 5.828669e-56 | -8.615850e-47 |
| Msa0792880 | Msa0797010 | 0.817821 | 2.703206e-52 | -8.615850e-47 |
| Msa0792880 | Msa0803530 | 0.879917 | 8.423564e-70 | -8.615850e-47 |
| Msa0792880 | Msa0812970 | 0.845684 | 3.483746e-59 | -8.615850e-47 |
| Msa0792880 | Msa0813030 | 0.853659 | 2.064434e-61 | -8.615850e-47 |
| Msa0792880 | Msa0825520 | 0.817715 | 2.855973e-52 | -8.615850e-47 |
| Msa0792880 | Msa0826650 | 0.877403 | 6.463060e-69 | -8.615850e-47 |
| Msa0792880 | Msa0828570 | 0.815987 | 6.974752e-52 | -8.615850e-47 |
| Msa0792880 | Msa0828900 | 0.995895 | 4.463311e-221 | -8.615850e-47 |
| Msa0792880 | Msa0829430 | 0.810391 | 1.179735e-50 | -8.615850e-47 |
| Msa0792880 | Msa0846070 | 0.805692 | 1.180594e-49 | -8.615850e-47 |
| Msa0792880 | Msa0853500 | 0.846445 | 2.161977e-59 | -8.615850e-47 |
| Msa0792880 | Msa0855090 | -0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa0792880 | Msa0864690 | 0.876728 | 1.108633e-68 | -8.615850e-47 |
| Msa0792880 | Msa0864730 | 0.816987 | 4.165017e-52 | -8.615850e-47 |
| Msa0792880 | Msa0864750 | 0.819983 | 8.718400e-53 | -8.615850e-47 |
| Msa0792880 | Msa0871470 | 0.826145 | 3.185974e-54 | -8.615850e-47 |
| Msa0792880 | Msa0879650 | 0.822097 | 2.841832e-53 | -8.615850e-47 |
| Msa0792880 | Msa0883660 | 0.807397 | 5.155968e-50 | -8.615850e-47 |
| Msa0792880 | Msa0888820 | 0.832206 | 1.078755e-55 | -8.615850e-47 |
| Msa0792880 | Msa0904630 | 0.812715 | 3.687718e-51 | -8.615850e-47 |
| Msa0792880 | Msa0909720 | 0.861420 | 1.038736e-63 | -8.615850e-47 |
| Msa0792880 | Msa0911910 | 0.871005 | 9.500097e-67 | -8.615850e-47 |
| Msa0792880 | Msa0936650 | 0.820689 | 6.006383e-53 | -8.615850e-47 |
| Msa0792880 | Msa0938420 | 0.812637 | 3.835491e-51 | -8.615850e-47 |
| Msa0792880 | Msa0950470 | 0.841982 | 3.414962e-58 | -8.615850e-47 |
| Msa0792880 | Msa0950570 | 0.845919 | 3.007777e-59 | -8.615850e-47 |
| Msa0792880 | Msa0968780 | 0.823223 | 1.555241e-53 | -8.615850e-47 |
| Msa0792880 | Msa0984000 | 0.869460 | 3.046353e-66 | -8.615850e-47 |
| Msa0792880 | Msa0987860 | 0.800071 | 1.711700e-48 | -8.615850e-47 |
| Msa0792880 | Msa0999590 | 0.816272 | 6.024690e-52 | -8.615850e-47 |
| Msa0792880 | Msa1004260 | 0.844070 | 9.489527e-59 | -8.615850e-47 |
| Msa0792880 | Msa1009170 | 0.839153 | 1.878760e-57 | -8.615850e-47 |
| Msa0792880 | Msa1014700 | 0.801219 | 9.981891e-49 | -8.615850e-47 |
| Msa0792880 | Msa1031530 | 0.827134 | 1.850148e-54 | -8.615850e-47 |
| Msa0792880 | Msa1040380 | -0.822725 | 2.031243e-53 | -8.615850e-47 |
| Msa0792880 | Msa1052030 | 0.807666 | 4.521432e-50 | -8.615850e-47 |
| Msa0792880 | Msa1071640 | 0.822486 | 2.308941e-53 | -8.615850e-47 |
| Msa0792880 | Msa1082150 | 0.840564 | 8.059189e-58 | -8.615850e-47 |
| Msa0792880 | Msa1093390 | 0.800076 | 1.707823e-48 | -8.615850e-47 |
| Msa0792880 | Msa1096510 | 0.807824 | 4.184611e-50 | -8.615850e-47 |
| Msa0792880 | Msa1096520 | 0.802808 | 4.705917e-49 | -8.615850e-47 |
| Msa0792880 | Msa1098340 | 0.809639 | 1.712991e-50 | -8.615850e-47 |
| Msa0792880 | Msa1098380 | 0.800343 | 1.506730e-48 | -8.615850e-47 |
| Msa0792880 | Msa1101300 | 0.817682 | 2.905856e-52 | -8.615850e-47 |
| Msa0792880 | Msa1108540 | -0.831311 | 1.793930e-55 | -8.615850e-47 |
| Msa0792880 | Msa1113210 | 0.808787 | 2.608973e-50 | -8.615850e-47 |
| Msa0792880 | Msa1113280 | 0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0792880 | Msa1117510 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0792880 | Msa1120660 | 0.805568 | 1.253710e-49 | -8.615850e-47 |
| Msa0792880 | Msa1125450 | 0.864340 | 1.304608e-64 | -8.615850e-47 |
| Msa0792880 | Msa1127910 | -0.821006 | 5.078333e-53 | -8.615850e-47 |
| Msa0792880 | Msa1130630 | 0.801798 | 7.595091e-49 | -8.615850e-47 |
| Msa0792880 | Msa1131900 | 0.804337 | 2.267322e-49 | -8.615850e-47 |
| Msa0792880 | Msa1136120 | 0.802792 | 4.743018e-49 | -8.615850e-47 |
| Msa0792880 | Msa1138440 | 0.824140 | 9.483272e-54 | -8.615850e-47 |
| Msa0792880 | Msa1138450 | 0.846236 | 2.465930e-59 | -8.615850e-47 |
| Msa0792880 | Msa1138480 | 0.820561 | 6.428996e-53 | -8.615850e-47 |
| Msa0792880 | Msa1138490 | 0.815039 | 1.133854e-51 | -8.615850e-47 |
| Msa0792880 | Msa1144730 | 0.831480 | 1.629602e-55 | -8.615850e-47 |
| Msa0792880 | Msa1152290 | -0.832027 | 1.194377e-55 | -8.615850e-47 |
| Msa0792880 | Msa1161210 | 0.822918 | 1.831839e-53 | -8.615850e-47 |
| Msa0792880 | Msa1164570 | 0.864987 | 8.182099e-65 | -8.615850e-47 |
| Msa0792880 | Msa1165820 | -0.836827 | 7.446851e-57 | -8.615850e-47 |
| Msa0792880 | Msa1166170 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0792880 | Msa1166270 | 0.807619 | 4.626255e-50 | -8.615850e-47 |
| Msa0792880 | Msa1173380 | 0.862820 | 3.865151e-64 | -8.615850e-47 |
| Msa0792880 | Msa1178120 | 0.813132 | 2.987738e-51 | -8.615850e-47 |
| Msa0792880 | Msa1180050 | 0.818227 | 2.187831e-52 | -8.615850e-47 |
| Msa0792880 | Msa1182800 | 0.879287 | 1.408932e-69 | -8.615850e-47 |
| Msa0792880 | Msa1182830 | 0.851829 | 6.878204e-61 | -8.615850e-47 |
| Msa0792880 | Msa1184010 | 0.810303 | 1.232708e-50 | -8.615850e-47 |
| Msa0792880 | Msa1184900 | 0.804416 | 2.182659e-49 | -8.615850e-47 |
| Msa0792880 | Msa1193400 | 0.818927 | 1.517927e-52 | -8.615850e-47 |
| Msa0792880 | Msa1193430 | 0.822974 | 1.777707e-53 | -8.615850e-47 |
| Msa0792880 | Msa1199610 | 0.826163 | 3.153380e-54 | -8.615850e-47 |
| Msa0792880 | Msa1199670 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
| Msa0792880 | Msa1204430 | 0.822128 | 2.795389e-53 | -8.615850e-47 |
| Msa0792880 | Msa1212740 | 0.822416 | 2.397392e-53 | -8.615850e-47 |
| Msa0792880 | Msa1212960 | 0.816424 | 5.569672e-52 | -8.615850e-47 |
| Msa0792880 | Msa1219060 | 0.802047 | 6.751018e-49 | -8.615850e-47 |
| Msa0792880 | Msa1236860 | 0.808915 | 2.449269e-50 | -8.615850e-47 |
| Msa0792880 | Msa1237260 | 0.829860 | 4.064382e-55 | -8.615850e-47 |
| Msa0792880 | Msa1237970 | 0.805348 | 1.393862e-49 | -8.615850e-47 |
| Msa0792880 | Msa1243730 | 0.820987 | 5.130983e-53 | -8.615850e-47 |
| Msa0792880 | Msa1249410 | 0.819778 | 9.715138e-53 | -8.615850e-47 |
| Msa0792880 | Msa1252300 | 0.839385 | 1.635327e-57 | -8.615850e-47 |
| Msa0792880 | Msa1270770 | 0.805815 | 1.112386e-49 | -8.615850e-47 |
| Msa0792880 | Msa1272950 | 0.818368 | 2.033494e-52 | -8.615850e-47 |
| Msa0792880 | Msa1279330 | 0.860348 | 2.199760e-63 | -8.615850e-47 |
| Msa0792880 | Msa1281130 | -0.806880 | 6.635520e-50 | -8.615850e-47 |
| Msa0792880 | Msa1286950 | 0.804326 | 2.279713e-49 | -8.615850e-47 |
| Msa0792880 | Msa1296650 | 0.806546 | 7.806901e-50 | -8.615850e-47 |
| Msa0792880 | Msa1308460 | 0.803487 | 3.406098e-49 | -8.615850e-47 |
| Msa0792880 | Msa1311150 | 0.810501 | 1.116984e-50 | -8.615850e-47 |
| Msa0792880 | Msa1313050 | 0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa0792880 | Msa1320330 | -0.807625 | 4.613027e-50 | -8.615850e-47 |
| Msa0792880 | Msa1328600 | 0.811977 | 5.344443e-51 | -8.615850e-47 |
| Msa0792880 | Msa1328750 | 0.812651 | 3.808939e-51 | -8.615850e-47 |
| Msa0792880 | Msa1331610 | 0.800273 | 1.557269e-48 | -8.615850e-47 |
| Msa0792880 | Msa1338180 | 0.820851 | 5.512791e-53 | -8.615850e-47 |
| Msa0792880 | Msa1340530 | 0.822603 | 2.168621e-53 | -8.615850e-47 |
| Msa0792880 | Msa1343450 | 0.814147 | 1.786468e-51 | -8.615850e-47 |
| Msa0792880 | Msa1348240 | 0.822372 | 2.453266e-53 | -8.615850e-47 |
| Msa0792880 | Msa1349810 | 0.838453 | 2.849573e-57 | -8.615850e-47 |
| Msa0792880 | Msa1358340 | 0.831388 | 1.717537e-55 | -8.615850e-47 |
| Msa0792880 | Msa1359890 | 0.824829 | 6.529826e-54 | -8.615850e-47 |
| Msa0792880 | Msa1361200 | 0.804157 | 2.471223e-49 | -8.615850e-47 |
| Msa0792880 | Msa1363560 | 0.804574 | 2.023765e-49 | -8.615850e-47 |
| Msa0792880 | Msa1371300 | -0.816429 | 5.556040e-52 | -8.615850e-47 |
| Msa0792880 | Msa1382750 | 0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0792880 | Msa1384620 | 0.820483 | 6.696797e-53 | -8.615850e-47 |
| Msa0792880 | Msa1386250 | 0.875886 | 2.163996e-68 | -8.615850e-47 |
| Msa0792880 | Msa1394900 | 0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa0792880 | Msa1404690 | 0.821321 | 4.296896e-53 | -8.615850e-47 |
| Msa0792880 | Msa1406020 | 0.868527 | 6.112202e-66 | -8.615850e-47 |
| Msa0792880 | Msa1431240 | 0.836542 | 8.802795e-57 | -8.615850e-47 |
| Msa0792880 | Msa1443550 | 0.817031 | 4.072104e-52 | -8.615850e-47 |
| Msa0792880 | Msa1450780 | 0.833117 | 6.409636e-56 | -8.615850e-47 |
| Msa0792880 | Msa1456620 | 0.856569 | 2.943850e-62 | -8.615850e-47 |
| Msa0792880 | Msa1457070 | 0.803989 | 2.679325e-49 | -8.615850e-47 |
| Msa0792880 | Msa1459540 | 0.804895 | 1.734315e-49 | -8.615850e-47 |
| Msa0792880 | Msa1460310 | -0.825288 | 5.086355e-54 | -8.615850e-47 |
| Msa0792880 | Msa1460530 | 0.847592 | 1.049107e-59 | -8.615850e-47 |
| Msa0792880 | Msa1463560 | -0.856037 | 4.218505e-62 | -8.615850e-47 |
| Msa0130100 | Msa0792880 | 0.825005 | 5.934254e-54 | -8.615850e-47 |
| Msa0131090 | Msa0792880 | 0.835467 | 1.649595e-56 | -8.615850e-47 |
| Msa0143280 | Msa0792880 | 0.878472 | 2.731026e-69 | -8.615850e-47 |
| Msa0147540 | Msa0792880 | 0.811059 | 8.458886e-51 | -8.615850e-47 |
| Msa0148430 | Msa0792880 | 0.835944 | 1.249429e-56 | -8.615850e-47 |
| Msa0152640 | Msa0792880 | -0.805749 | 1.148680e-49 | -8.615850e-47 |
| Msa0153440 | Msa0792880 | 0.828299 | 9.712814e-55 | -8.615850e-47 |
| Msa0154240 | Msa0792880 | 0.855422 | 6.375918e-62 | -8.615850e-47 |
| Msa0154270 | Msa0792880 | 0.843863 | 1.078237e-58 | -8.615850e-47 |
| Msa0163530 | Msa0792880 | 0.820112 | 8.148668e-53 | -8.615850e-47 |
| Msa0163960 | Msa0792880 | 0.818115 | 2.319875e-52 | -8.615850e-47 |
| Msa0164630 | Msa0792880 | 0.811284 | 7.561673e-51 | -8.615850e-47 |
| Msa0173370 | Msa0792880 | 0.850665 | 1.466134e-60 | -8.615850e-47 |
| Msa0175810 | Msa0792880 | 0.804857 | 1.766030e-49 | -8.615850e-47 |
| Msa0175920 | Msa0792880 | 0.823887 | 1.087530e-53 | -8.615850e-47 |
| Msa0180100 | Msa0792880 | 0.803798 | 2.935198e-49 | -8.615850e-47 |
| Msa0180290 | Msa0792880 | 0.824131 | 9.529515e-54 | -8.615850e-47 |
| Msa0181410 | Msa0792880 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
| Msa0184510 | Msa0792880 | 0.848254 | 6.889484e-60 | -8.615850e-47 |
| Msa0187980 | Msa0792880 | 0.826329 | 2.880556e-54 | -8.615850e-47 |
| Msa0196630 | Msa0792880 | 0.841977 | 3.424501e-58 | -8.615850e-47 |
| Msa0197030 | Msa0792880 | 0.809164 | 2.166448e-50 | -8.615850e-47 |
| Msa0198440 | Msa0792880 | 0.813241 | 2.827158e-51 | -8.615850e-47 |
| Msa0199740 | Msa0792880 | 0.808781 | 2.615864e-50 | -8.615850e-47 |
| Msa0224370 | Msa0792880 | 0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa0224400 | Msa0792880 | 0.811515 | 6.737369e-51 | -8.615850e-47 |
| Msa0224880 | Msa0792880 | -0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0225880 | Msa0792880 | 0.813352 | 2.673062e-51 | -8.615850e-47 |
| Msa0377280 | Msa0792880 | 0.819118 | 1.373597e-52 | -8.615850e-47 |
| Msa0378670 | Msa0792880 | 0.821194 | 4.597151e-53 | -8.615850e-47 |
| Msa0378700 | Msa0792880 | 0.806896 | 6.582787e-50 | -8.615850e-47 |
| Msa0379340 | Msa0792880 | -0.849819 | 2.532008e-60 | -8.615850e-47 |
| Msa0382860 | Msa0792880 | -0.806866 | 6.681160e-50 | -8.615850e-47 |
| Msa0384530 | Msa0792880 | 0.823372 | 1.434797e-53 | -8.615850e-47 |
| Msa0387970 | Msa0792880 | 0.862429 | 5.101840e-64 | -8.615850e-47 |
| Msa0389050 | Msa0792880 | 0.824224 | 9.063508e-54 | -8.615850e-47 |
| Msa0389060 | Msa0792880 | 0.841240 | 5.355847e-58 | -8.615850e-47 |
| Msa0392050 | Msa0792880 | 0.832190 | 1.089085e-55 | -8.615850e-47 |
| Msa0392090 | Msa0792880 | 0.804823 | 1.795688e-49 | -8.615850e-47 |
| Msa0392540 | Msa0792880 | 0.823230 | 1.549498e-53 | -8.615850e-47 |
| Msa0401340 | Msa0792880 | 0.802494 | 5.463129e-49 | -8.615850e-47 |
| Msa0404060 | Msa0792880 | 0.819488 | 1.131104e-52 | -8.615850e-47 |
| Msa0404690 | Msa0792880 | 0.844523 | 7.174219e-59 | -8.615850e-47 |
| Msa0425320 | Msa0792880 | 0.810885 | 9.227126e-51 | -8.615850e-47 |
| Msa0428330 | Msa0792880 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0428850 | Msa0792880 | -0.853094 | 2.997891e-61 | -8.615850e-47 |
| Msa0432940 | Msa0792880 | -0.816040 | 6.788448e-52 | -8.615850e-47 |
| Msa0432970 | Msa0792880 | -0.812037 | 5.185532e-51 | -8.615850e-47 |
| Msa0435010 | Msa0792880 | 0.824748 | 6.823273e-54 | -8.615850e-47 |
| Msa0440310 | Msa0792880 | 0.837338 | 5.512899e-57 | -8.615850e-47 |
| Msa0448120 | Msa0792880 | 0.808394 | 3.165430e-50 | -8.615850e-47 |
| Msa0467710 | Msa0792880 | 0.837481 | 5.067830e-57 | -8.615850e-47 |
| Msa0469950 | Msa0792880 | 0.831977 | 1.228934e-55 | -8.615850e-47 |
| Msa0471760 | Msa0792880 | 0.816207 | 6.227235e-52 | -8.615850e-47 |
| Msa0477030 | Msa0792880 | -0.819524 | 1.110310e-52 | -8.615850e-47 |
| Msa0479030 | Msa0792880 | 0.892537 | 1.449046e-74 | -8.615850e-47 |
| Msa0479100 | Msa0792880 | 0.852510 | 4.403181e-61 | -8.615850e-47 |
| Msa0479950 | Msa0792880 | 0.819000 | 1.461470e-52 | -8.615850e-47 |
| Msa0238860 | Msa0792880 | 0.806762 | 7.028753e-50 | -8.615850e-47 |
| Msa0240640 | Msa0792880 | 0.800749 | 1.245494e-48 | -8.615850e-47 |
| Msa0245870 | Msa0792880 | 0.881045 | 3.324178e-70 | -8.615850e-47 |
| Msa0251140 | Msa0792880 | 0.815162 | 1.064803e-51 | -8.615850e-47 |
| Msa0260470 | Msa0792880 | 0.815937 | 7.157690e-52 | -8.615850e-47 |
| Msa0264940 | Msa0792880 | -0.823656 | 1.231713e-53 | -8.615850e-47 |
| Msa0265620 | Msa0792880 | 0.804738 | 1.869921e-49 | -8.615850e-47 |
| Msa0265630 | Msa0792880 | 0.804038 | 2.616256e-49 | -8.615850e-47 |
| Msa0278670 | Msa0792880 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0302990 | Msa0792880 | -0.825613 | 4.260542e-54 | -8.615850e-47 |
| Msa0304110 | Msa0792880 | 0.817218 | 3.696711e-52 | -8.615850e-47 |
| Msa0308570 | Msa0792880 | 0.844476 | 7.384335e-59 | -8.615850e-47 |
| Msa0309670 | Msa0792880 | 0.818973 | 1.481651e-52 | -8.615850e-47 |
| Msa0318070 | Msa0792880 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0327860 | Msa0792880 | 0.802705 | 4.942626e-49 | -8.615850e-47 |
| Msa0340530 | Msa0792880 | 0.825474 | 4.596610e-54 | -8.615850e-47 |
| Msa0341190 | Msa0792880 | 0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa0343370 | Msa0792880 | 0.807874 | 4.084420e-50 | -8.615850e-47 |
| Msa0344680 | Msa0792880 | 0.832967 | 6.987773e-56 | -8.615850e-47 |
| Msa0346790 | Msa0792880 | 0.828957 | 6.732937e-55 | -8.615850e-47 |
| Msa0349220 | Msa0792880 | 0.803039 | 4.216540e-49 | -8.615850e-47 |
| Msa0487490 | Msa0792880 | 0.801703 | 7.944407e-49 | -8.615850e-47 |
| Msa0515460 | Msa0792880 | 0.811492 | 6.814217e-51 | -8.615850e-47 |
| Msa0518480 | Msa0792880 | 0.814175 | 1.761482e-51 | -8.615850e-47 |
| Msa0530340 | Msa0792880 | 0.852360 | 4.858235e-61 | -8.615850e-47 |
| Msa0535020 | Msa0792880 | 0.826654 | 2.409865e-54 | -8.615850e-47 |
| Msa0535050 | Msa0792880 | 0.819002 | 1.459347e-52 | -8.615850e-47 |
| Msa0545230 | Msa0792880 | 0.829021 | 6.496669e-55 | -8.615850e-47 |
| Msa0548210 | Msa0792880 | 0.843886 | 1.063241e-58 | -8.615850e-47 |
| Msa0549540 | Msa0792880 | 0.834685 | 2.598323e-56 | -8.615850e-47 |
| Msa0556070 | Msa0792880 | 0.859452 | 4.096255e-63 | -8.615850e-47 |
| Msa0558710 | Msa0792880 | 0.802492 | 5.467320e-49 | -8.615850e-47 |
| Msa0560370 | Msa0792880 | 0.801881 | 7.305355e-49 | -8.615850e-47 |
| Msa0561420 | Msa0792880 | 0.885289 | 9.247119e-72 | -8.615850e-47 |
| Msa0565530 | Msa0792880 | 0.801612 | 8.293130e-49 | -8.615850e-47 |
| Msa0565760 | Msa0792880 | 0.841367 | 4.959599e-58 | -8.615850e-47 |
| Msa0565860 | Msa0792880 | 0.844053 | 9.590947e-59 | -8.615850e-47 |
| Msa0566010 | Msa0792880 | 0.851303 | 9.687013e-61 | -8.615850e-47 |
| Msa0569230 | Msa0792880 | 0.848968 | 4.371183e-60 | -8.615850e-47 |
| Msa0569360 | Msa0792880 | 0.862705 | 4.194016e-64 | -8.615850e-47 |
| Msa0569930 | Msa0792880 | 0.842953 | 1.886758e-58 | -8.615850e-47 |
| Msa0570680 | Msa0792880 | 0.846655 | 1.894578e-59 | -8.615850e-47 |
| Msa0573970 | Msa0792880 | 0.804185 | 2.439222e-49 | -8.615850e-47 |
| Msa0577050 | Msa0792880 | 0.827392 | 1.604929e-54 | -8.615850e-47 |
| Msa0579230 | Msa0792880 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0589610 | Msa0792880 | 0.829318 | 5.505497e-55 | -8.615850e-47 |
| Msa0591780 | Msa0792880 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0600820 | Msa0792880 | 0.836145 | 1.110817e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792880 | MtrunA17_Chr5g0400361 | 93.537 | 557 | 27 | 2 | 1 | 557 | 1 | 548 | 0.0 | 1055 |
| Msa0792880 | MtrunA17_Chr1g0202291 | 74.310 | 471 | 121 | 0 | 85 | 555 | 102 | 572 | 0.0 | 740 |
| Msa0792880 | MtrunA17_Chr6g0463101 | 71.690 | 491 | 136 | 1 | 66 | 556 | 88 | 575 | 0.0 | 739 |
| Msa0792880 | MtrunA17_Chr1g0188101 | 43.908 | 476 | 245 | 7 | 87 | 541 | 90 | 564 | 2.32e-122 | 372 |
| Msa0792880 | MtrunA17_Chr1g0206791 | 41.393 | 488 | 263 | 9 | 87 | 555 | 17 | 500 | 1.95e-112 | 343 |
| Msa0792880 | MtrunA17_Chr4g0043311 | 39.401 | 401 | 233 | 7 | 82 | 473 | 3 | 402 | 4.34e-88 | 280 |
| Msa0792880 | MtrunA17_Chr4g0043301 | 38.686 | 411 | 236 | 8 | 82 | 480 | 6 | 412 | 4.22e-87 | 278 |
| Msa0792880 | MtrunA17_Chr7g0263711 | 39.303 | 402 | 230 | 8 | 83 | 473 | 7 | 405 | 8.18e-86 | 275 |
| Msa0792880 | MtrunA17_Chr6g0448901 | 36.842 | 475 | 267 | 11 | 87 | 531 | 21 | 492 | 1.55e-84 | 271 |
| Msa0792880 | MtrunA17_Chr1g0197911 | 29.455 | 404 | 265 | 10 | 88 | 474 | 30 | 430 | 7.34e-46 | 169 |
| Msa0792880 | MtrunA17_Chr1g0179541 | 27.459 | 488 | 288 | 15 | 88 | 536 | 30 | 490 | 2.25e-43 | 162 |
| Msa0792880 | MtrunA17_Chr7g0265591 | 28.218 | 404 | 271 | 9 | 88 | 474 | 30 | 431 | 2.38e-43 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792880 | AT1G32440.1 | 78.270 | 474 | 102 | 1 | 82 | 555 | 95 | 567 | 0.0 | 778 |
| Msa0792880 | AT5G52920.1 | 74.098 | 471 | 122 | 0 | 85 | 555 | 109 | 579 | 0.0 | 748 |
| Msa0792880 | AT3G22960.1 | 43.671 | 474 | 247 | 8 | 87 | 541 | 118 | 590 | 2.12e-117 | 360 |
| Msa0792880 | AT5G56350.1 | 39.120 | 409 | 235 | 7 | 83 | 480 | 5 | 410 | 7.32e-89 | 283 |
| Msa0792880 | AT4G26390.1 | 37.246 | 443 | 249 | 9 | 83 | 500 | 4 | 442 | 2.24e-87 | 279 |
| Msa0792880 | AT5G63680.3 | 37.630 | 481 | 266 | 12 | 82 | 531 | 15 | 492 | 8.13e-87 | 278 |
| Msa0792880 | AT5G63680.1 | 37.630 | 481 | 266 | 12 | 82 | 531 | 15 | 492 | 8.13e-87 | 278 |
| Msa0792880 | AT5G63680.2 | 37.630 | 481 | 266 | 12 | 82 | 531 | 15 | 492 | 8.13e-87 | 278 |
| Msa0792880 | AT3G25960.1 | 35.622 | 466 | 280 | 8 | 85 | 531 | 15 | 479 | 2.17e-85 | 274 |
| Msa0792880 | AT3G55650.1 | 38.519 | 405 | 239 | 6 | 85 | 480 | 15 | 418 | 2.41e-85 | 274 |
| Msa0792880 | AT5G08570.1 | 36.268 | 477 | 267 | 11 | 87 | 531 | 21 | 492 | 8.80e-85 | 273 |
| Msa0792880 | AT5G08570.2 | 36.268 | 477 | 267 | 11 | 87 | 531 | 21 | 492 | 8.80e-85 | 273 |
| Msa0792880 | AT5G08570.3 | 36.268 | 477 | 267 | 11 | 87 | 531 | 21 | 492 | 8.80e-85 | 273 |
| Msa0792880 | AT3G04050.1 | 33.056 | 481 | 285 | 9 | 85 | 531 | 15 | 492 | 2.26e-79 | 258 |
| Msa0792880 | AT3G55810.1 | 35.109 | 413 | 226 | 9 | 85 | 481 | 15 | 401 | 1.63e-69 | 232 |
| Msa0792880 | AT3G52990.1 | 27.869 | 488 | 300 | 16 | 88 | 536 | 30 | 504 | 9.93e-45 | 166 |
| Msa0792880 | AT2G36580.1 | 26.915 | 483 | 311 | 13 | 88 | 536 | 30 | 504 | 7.49e-43 | 160 |
| Msa0792880 | AT3G52990.2 | 27.371 | 464 | 285 | 16 | 112 | 536 | 1 | 451 | 2.22e-39 | 150 |
| Msa0792880 | AT3G49160.1 | 30.568 | 229 | 141 | 6 | 195 | 412 | 473 | 694 | 5.17e-20 | 94.4 |
| Msa0792880 | AT3G49160.3 | 30.568 | 229 | 141 | 6 | 195 | 412 | 385 | 606 | 7.59e-20 | 94.0 |
Find 126 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAACTCTTCTTCGCTTTA+TGG | 0.078528 | 5_3:+4689292 | Msa0792880:CDS |
| GCTGATGCTGTCATGCTTTC+AGG | 0.174287 | 5_3:+4692717 | Msa0792880:CDS |
| TGGATAATATTCTTGGTTAA+AGG | 0.175329 | 5_3:+4694278 | Msa0792880:exon |
| ACTGGTTGGAGGAGGTTATT+TGG | 0.214557 | 5_3:-4689141 | None:intergenic |
| TCCCCTTCTTTGAGTAAAAT+TGG | 0.214804 | 5_3:-4689676 | None:intergenic |
| CTGGTTGGAGGAGGTTATTT+GGG | 0.225464 | 5_3:-4689140 | None:intergenic |
| TAGAGTGGTTTATGAGTTAA+AGG | 0.244503 | 5_3:+4690318 | Msa0792880:CDS |
| ATATTTGTTGCCACAATAAC+TGG | 0.253207 | 5_3:-4692618 | None:intergenic |
| AACAACAAGTTGAATAATTT+AGG | 0.296423 | 5_3:+4694403 | Msa0792880:three_prime_UTR |
| TTATGGAAGCTCAAATGATT+TGG | 0.306013 | 5_3:-4693399 | None:intergenic |
| CATCAGATTACCTGCAATAA+AGG | 0.308265 | 5_3:-4691652 | None:intergenic |
| CCCATCTGAAGCTGAAAGTA+TGG | 0.322009 | 5_3:-4690548 | None:intergenic |
| TTTGAAAATTGCATGTATAT+AGG | 0.322417 | 5_3:-4694017 | None:intergenic |
| CTAGCTCACGTGACATGATT+TGG | 0.325492 | 5_3:+4689386 | Msa0792880:CDS |
| GGATAATATTCTTGGTTAAA+GGG | 0.336434 | 5_3:+4694279 | Msa0792880:exon |
| AGACATAATTGTTGCATGTA+AGG | 0.339282 | 5_3:-4693600 | None:intergenic |
| GAAAGTATGGAATGAAGATT+TGG | 0.359728 | 5_3:-4690535 | None:intergenic |
| ATTATTGTGTTCACCAGAAC+TGG | 0.366269 | 5_3:+4693641 | Msa0792880:CDS |
| GTTCTGGTGAACACAATAAT+AGG | 0.368132 | 5_3:-4693638 | None:intergenic |
| AGGTTCATGGATAATATTCT+TGG | 0.368646 | 5_3:+4694271 | Msa0792880:exon |
| TTATGCATGCGGTGGCTCTA+AGG | 0.369389 | 5_3:+4693343 | Msa0792880:CDS |
| CTTTATGGTACGTGGCGAAC+AGG | 0.375273 | 5_3:+4689307 | Msa0792880:CDS |
| CAACAGAATTATACCAGTTA+TGG | 0.376774 | 5_3:-4690099 | None:intergenic |
| GTTAAATGTCAAGTTATTGA+TGG | 0.386049 | 5_3:+4690017 | Msa0792880:CDS |
| ATTCAAGTTCGCGAGGTTCA+TGG | 0.386523 | 5_3:+4694258 | Msa0792880:CDS |
| GCAACGCTTCCTTCCATAAC+TGG | 0.387501 | 5_3:+4690086 | Msa0792880:CDS |
| ATTTGGAAGCTCGCTCAAAC+TGG | 0.405107 | 5_3:+4689403 | Msa0792880:CDS |
| AATAGCCATGGATCCAGTTC+TGG | 0.406106 | 5_3:-4693654 | None:intergenic |
| TAGAATGAAATGGAAATTGT+TGG | 0.410456 | 5_3:-4689081 | None:intergenic |
| GGACCTTGGAGCTGAACTTC+CGG | 0.432212 | 5_3:+4691618 | Msa0792880:CDS |
| GACTGGGAAGATATCAAATT+CGG | 0.436482 | 5_3:+4690247 | Msa0792880:CDS |
| ACGAAGATCGTGTGCACGAT+TGG | 0.440932 | 5_3:+4689355 | Msa0792880:CDS |
| AAATTGTTGGGAGATGGAAT+TGG | 0.447437 | 5_3:-4689068 | None:intergenic |
| TGAAGAAGTTCCTTTATTGC+AGG | 0.447794 | 5_3:+4691642 | Msa0792880:CDS |
| ATGGTTGCTCGTGGGGACCT+TGG | 0.459485 | 5_3:+4691604 | Msa0792880:CDS |
| AAAGCGGAGCACAACCAATC+TGG | 0.463651 | 5_3:+4694214 | Msa0792880:CDS |
| AGGCAAACATTGCTCCCATA+TGG | 0.466388 | 5_3:-4693580 | None:intergenic |
| TTGTTGAGTAGGGCCTATAA+TGG | 0.470791 | 5_3:-4693685 | None:intergenic |
| AATAAAGGAACTTCTTCAAC+CGG | 0.474687 | 5_3:-4691637 | None:intergenic |
| AGAATGAAATGGAAATTGTT+GGG | 0.475446 | 5_3:-4689080 | None:intergenic |
| AACCTTGGTGTCAAGCATGA+TGG | 0.477591 | 5_3:-4689533 | None:intergenic |
| TTTAGGAGGAATGATGTCTC+TGG | 0.478177 | 5_3:+4689968 | Msa0792880:intron |
| AAATCATTTGAGCTTCCATA+AGG | 0.479866 | 5_3:+4693401 | Msa0792880:CDS |
| ATGTCACGTGAGCTAGTAGA+TGG | 0.481868 | 5_3:-4689379 | None:intergenic |
| GTTAATAATACTTACGAGAG+TGG | 0.482443 | 5_3:-4689167 | None:intergenic |
| ATGGCGGAGAATTGAAATCT+AGG | 0.484689 | 5_3:+4690036 | Msa0792880:CDS |
| GAAAGCAAATATTGTTGAGT+AGG | 0.489292 | 5_3:-4693696 | None:intergenic |
| TCCATACTTTCAGCTTCAGA+TGG | 0.490595 | 5_3:+4690547 | Msa0792880:CDS |
| AGGAAGGATTAAGCAGAGGT+TGG | 0.491594 | 5_3:+4693974 | Msa0792880:CDS |
| TACTTACGAGAGTGGGAGAC+TGG | 0.497804 | 5_3:-4689159 | None:intergenic |
| AGGCGTCATTTGAATGTTCG+TGG | 0.498628 | 5_3:+4690056 | Msa0792880:CDS |
| ATGGATTCCGCACGCCAGAT+TGG | 0.500210 | 5_3:-4694228 | None:intergenic |
| TTGTAGGCAATGGTTGCTCG+TGG | 0.504158 | 5_3:+4691595 | Msa0792880:intron |
| TATGGAATGAAGATTTGGTA+TGG | 0.504548 | 5_3:-4690530 | None:intergenic |
| TCTTTGAGTAAAATTGGTTG+TGG | 0.506244 | 5_3:-4689670 | None:intergenic |
| GGAAGGATTAAGCAGAGGTT+GGG | 0.506385 | 5_3:+4693975 | Msa0792880:CDS |
| TGTAGGCAATGGTTGCTCGT+GGG | 0.507482 | 5_3:+4691596 | Msa0792880:intron |
| CTTCTTATGCTGCAGAGTAA+AGG | 0.507893 | 5_3:+4694156 | Msa0792880:intron |
| TTGTTGGGAGATGGAATTGG+AGG | 0.511001 | 5_3:-4689065 | None:intergenic |
| CCATACTTTCAGCTTCAGAT+GGG | 0.512422 | 5_3:+4690548 | Msa0792880:CDS |
| TTATCTTCACAGAAAAGGAC+TGG | 0.512596 | 5_3:+4690230 | Msa0792880:intron |
| AAGTGAGAGAGGAAAAGAAA+AGG | 0.519210 | 5_3:-4694329 | None:intergenic |
| ATAACTTTAACAGATTTCAA+TGG | 0.520035 | 5_3:-4693324 | None:intergenic |
| TTATGCTTAGTAGAATGAAA+TGG | 0.522562 | 5_3:-4689091 | None:intergenic |
| AAATGGAAATTGTTGGGAGA+TGG | 0.523424 | 5_3:-4689074 | None:intergenic |
| CTATGATTCATAGAAAGACT+TGG | 0.524573 | 5_3:-4694356 | None:intergenic |
| GACTTCCGCCCTAGTTGGTG+TGG | 0.524986 | 5_3:-4692664 | None:intergenic |
| AGAATCACTTCTTAAAACAC+TGG | 0.527093 | 5_3:-4693373 | None:intergenic |
| TACGAGAGTGGGAGACTGGT+TGG | 0.531081 | 5_3:-4689155 | None:intergenic |
| TTTGTCAATGATGTCGAGGT+TGG | 0.531439 | 5_3:+4689766 | Msa0792880:CDS |
| GTAGGCAATGGTTGCTCGTG+GGG | 0.538287 | 5_3:+4691597 | Msa0792880:intron |
| GGAGACGTTCTTCTCGTCGA+TGG | 0.538636 | 5_3:+4689787 | Msa0792880:CDS |
| TTTATGGTACGTGGCGAACA+GGG | 0.539109 | 5_3:+4689308 | Msa0792880:CDS |
| AAAGCAAATATTGTTGAGTA+GGG | 0.543382 | 5_3:-4693695 | None:intergenic |
| TTAATAATACTTACGAGAGT+GGG | 0.544034 | 5_3:-4689166 | None:intergenic |
| TAGAGCTCTCAAACTACTGT+TGG | 0.548085 | 5_3:+4694061 | Msa0792880:CDS |
| AGATTTGAAGAGAGAAGACG+TGG | 0.548216 | 5_3:-4689017 | None:intergenic |
| TTATTCATCCCACACCAACT+AGG | 0.548728 | 5_3:+4692655 | Msa0792880:CDS |
| CTTCTTCGCTTTATGGTACG+TGG | 0.549723 | 5_3:+4689299 | Msa0792880:CDS |
| TATTCATCCCACACCAACTA+GGG | 0.551145 | 5_3:+4692656 | Msa0792880:CDS |
| TCTGAGACTTCCGCCCTAGT+TGG | 0.552113 | 5_3:-4692669 | None:intergenic |
| AATGCAAAAGCCAGTTATTG+TGG | 0.555416 | 5_3:+4692608 | Msa0792880:CDS |
| ACATCCCCACTTCTAACTTC+AGG | 0.560293 | 5_3:-4689646 | None:intergenic |
| GCGAACTTGAATGTGGTGAA+TGG | 0.564425 | 5_3:-4694247 | None:intergenic |
| AGTGGGAGACTGGTTGGAGG+AGG | 0.565230 | 5_3:-4689149 | None:intergenic |
| CGCTCAAACTGGAATGAATG+TGG | 0.566062 | 5_3:+4689414 | Msa0792880:CDS |
| ATTTGTCAAGGATGCTAGAG+TGG | 0.569048 | 5_3:+4690303 | Msa0792880:CDS |
| TTCCATCATGCTTGACACCA+AGG | 0.575678 | 5_3:+4689531 | Msa0792880:CDS |
| TAAGTCAAAGACAAAAGACT+TGG | 0.575703 | 5_3:+4689995 | Msa0792880:CDS |
| ATGGCTCAAAAGAATAGCCA+TGG | 0.577093 | 5_3:-4693666 | None:intergenic |
| TGGTTGGAGGAGGTTATTTG+GGG | 0.581391 | 5_3:-4689139 | None:intergenic |
| CTATGCTGTATCATTTGTCA+AGG | 0.582412 | 5_3:+4690291 | Msa0792880:CDS |
| TATCTTCACAGAAAAGGACT+GGG | 0.583985 | 5_3:+4690231 | Msa0792880:intron |
| GAGAGTGGGAGACTGGTTGG+AGG | 0.588953 | 5_3:-4689152 | None:intergenic |
| CAACCGGAAGTTCAGCTCCA+AGG | 0.592964 | 5_3:-4691621 | None:intergenic |
| ATTCTACTAAGCATAAGCAT+AGG | 0.598053 | 5_3:+4689098 | Msa0792880:CDS |
| CAGGGTCCTGAAGTTAGAAG+TGG | 0.601265 | 5_3:+4689640 | Msa0792880:intron |
| GTTCACCAGAACTGGATCCA+TGG | 0.601626 | 5_3:+4693649 | Msa0792880:CDS |
| CTCGTTTGAATATGTCACAT+GGG | 0.602332 | 5_3:+4689437 | Msa0792880:CDS |
| AGGGTCCTGAAGTTAGAAGT+GGG | 0.603493 | 5_3:+4689641 | Msa0792880:intron |
| CTTTCAGGAGAAACCGCACA+TGG | 0.609257 | 5_3:+4692732 | Msa0792880:CDS |
| GACTTGGTTACAAGTGAGAG+AGG | 0.617891 | 5_3:-4694340 | None:intergenic |
| AGAATTATACCAGTTATGGA+AGG | 0.618973 | 5_3:-4690095 | None:intergenic |
| ACAGAGGAAGGATTAAGCAG+AGG | 0.619421 | 5_3:+4693970 | Msa0792880:intron |
| GCAAACACACTTTCCATGTG+CGG | 0.620007 | 5_3:-4692745 | None:intergenic |
| TAGTTTGAGAGCTCTAGCAA+AGG | 0.632195 | 5_3:-4694054 | None:intergenic |
| AAATGTCAAGTTATTGATGG+CGG | 0.632838 | 5_3:+4690020 | Msa0792880:CDS |
| ACTTCCGCCCTAGTTGGTGT+GGG | 0.639256 | 5_3:-4692663 | None:intergenic |
| CATACTTTCAGCTTCAGATG+GGG | 0.642578 | 5_3:+4690549 | Msa0792880:CDS |
| AGTAAAGGTCATTTAGACGA+GGG | 0.650023 | 5_3:+4694171 | Msa0792880:CDS |
| TTATGGTACGTGGCGAACAG+GGG | 0.652515 | 5_3:+4689309 | Msa0792880:CDS |
| TCACCACATTCAAGTTCGCG+AGG | 0.654208 | 5_3:+4694251 | Msa0792880:CDS |
| TGTTAAAGTTATGCATGCGG+TGG | 0.657671 | 5_3:+4693335 | Msa0792880:CDS |
| TATGTTACTCTTGTTCAAAG+CGG | 0.659469 | 5_3:+4694198 | Msa0792880:CDS |
| AGCACAACCAATCTGGCGTG+CGG | 0.662564 | 5_3:+4694221 | Msa0792880:CDS |
| GATTTGAAGAGAGAAGACGT+GGG | 0.664172 | 5_3:-4689016 | None:intergenic |
| GTAAAGGTCATTTAGACGAG+GGG | 0.667617 | 5_3:+4694172 | Msa0792880:CDS |
| GCTCGTTTGAATATGTCACA+TGG | 0.667972 | 5_3:+4689436 | Msa0792880:CDS |
| GAGTAAAGGTCATTTAGACG+AGG | 0.670895 | 5_3:+4694170 | Msa0792880:intron |
| TCATCCCACACCAACTAGGG+CGG | 0.676041 | 5_3:+4692659 | Msa0792880:CDS |
| GGGTCCTGAAGTTAGAAGTG+GGG | 0.678048 | 5_3:+4689642 | Msa0792880:intron |
| ATTGCAATTGCAGTAAGACA+AGG | 0.681715 | 5_3:+4692693 | Msa0792880:CDS |
| TCGTTTGAATATGTCACATG+GGG | 0.683251 | 5_3:+4689438 | Msa0792880:CDS |
| GAACCTCGCGAACTTGAATG+TGG | 0.702421 | 5_3:-4694254 | None:intergenic |
| ATCTGTTAAAGTTATGCATG+CGG | 0.709524 | 5_3:+4693332 | Msa0792880:CDS |
| GGTTGGAGGAGGTTATTTGG+GGG | 0.775151 | 5_3:-4689138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTATAGTAAAATATAT+AGG | + | chr5_3:4691935-4691954 | Msa0792880:intron | 10.0% |
| !!! | TGTAAGAAATTTATTTTAAA+AGG | + | chr5_3:4693281-4693300 | Msa0792880:intron | 10.0% |
| !!! | TTCAATTTTACTATTAAAAG+AGG | + | chr5_3:4689703-4689722 | Msa0792880:CDS | 15.0% |
| !!! | TCAATTTTACTATTAAAAGA+GGG | + | chr5_3:4689704-4689723 | Msa0792880:CDS | 15.0% |
| !! | GATTATTATAAACACAAAAT+TGG | - | chr5_3:4689863-4689882 | None:intergenic | 15.0% |
| !!! | GTTTTGATATGTTTAATAAA+AGG | - | chr5_3:4690624-4690643 | None:intergenic | 15.0% |
| !! | TTTATTAAACATATCAAAAC+TGG | + | chr5_3:4690624-4690643 | Msa0792880:intron | 15.0% |
| !!! | ACATTTCAAGTTAAAAATAT+CGG | + | chr5_3:4690721-4690740 | Msa0792880:intron | 15.0% |
| !! | CACAAATAAATATAATACTT+TGG | - | chr5_3:4691541-4691560 | None:intergenic | 15.0% |
| !!! | ATGTTTGATAATCATTATTT+TGG | + | chr5_3:4691751-4691770 | Msa0792880:intron | 15.0% |
| !!! | ATTTGAATCTTTTGTTTTAT+AGG | - | chr5_3:4692270-4692289 | None:intergenic | 15.0% |
| !! | TTGAACTGATAAAATAAAAA+AGG | - | chr5_3:4692791-4692810 | None:intergenic | 15.0% |
| !! | AAATATAAGGATAAATAGAA+TGG | + | chr5_3:4692954-4692973 | Msa0792880:intron | 15.0% |
| !!! | ATTTACTTTTTAAAATGTCT+AGG | - | chr5_3:4693045-4693064 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGATGACAAATT+AGG | - | chr5_3:4693202-4693221 | None:intergenic | 15.0% |
| !! | AATGTAAACACAAATTAATT+AGG | - | chr5_3:4693550-4693569 | None:intergenic | 15.0% |
| !!! | AAAATCAATAGTTTTCTGAT+GGG | - | chr5_3:4689473-4689492 | None:intergenic | 20.0% |
| !!! | CAATTTTACTATTAAAAGAG+GGG | + | chr5_3:4689705-4689724 | Msa0792880:CDS | 20.0% |
| !! | TATTATAAACACAAAATTGG+AGG | - | chr5_3:4689860-4689879 | None:intergenic | 20.0% |
| !!! | CAAAAACATAATTACTTTTG+AGG | - | chr5_3:4690348-4690367 | None:intergenic | 20.0% |
| !!! | TAATTTTATATCTTTTCCGT+AGG | + | chr5_3:4690460-4690479 | Msa0792880:intron | 20.0% |
| !! | AATACATGATTTAAACAATG+AGG | - | chr5_3:4690581-4690600 | None:intergenic | 20.0% |
| !! | TACAATTAGATGATTACTAA+TGG | - | chr5_3:4691514-4691533 | None:intergenic | 20.0% |
| !! | ACAGACTATTTATATAAATG+AGG | + | chr5_3:4691970-4691989 | Msa0792880:intron | 20.0% |
| !! | CAGACTATTTATATAAATGA+GGG | + | chr5_3:4691971-4691990 | Msa0792880:intron | 20.0% |
| !! | ACCATAAAAAATGTTTATGA+AGG | + | chr5_3:4692315-4692334 | Msa0792880:intron | 20.0% |
| !!! | TCCTTCATAAACATTTTTTA+TGG | - | chr5_3:4692319-4692338 | None:intergenic | 20.0% |
| !! | TCGCAAAATTATTAAAAGAA+CGG | - | chr5_3:4692465-4692484 | None:intergenic | 20.0% |
| !!! | ATATCTTTTCACTGATATTT+AGG | + | chr5_3:4692499-4692518 | Msa0792880:intron | 20.0% |
| !! | ATAAAATAAAAAAGGAACCA+TGG | - | chr5_3:4692783-4692802 | None:intergenic | 20.0% |
| !! | ATAACTTTAACAGATTTCAA+TGG | - | chr5_3:4693327-4693346 | None:intergenic | 20.0% |
| !! | GATATTATCAATCAAATCTA+CGG | - | chr5_3:4693521-4693540 | None:intergenic | 20.0% |
| !!! | ACACAAATTAATTAGGTTTT+AGG | - | chr5_3:4693543-4693562 | None:intergenic | 20.0% |
| !! | GATCATATTATATTATCTTG+AGG | + | chr5_3:4693892-4693911 | Msa0792880:intron | 20.0% |
| !! | TTTGAAAATTGCATGTATAT+AGG | - | chr5_3:4694020-4694039 | None:intergenic | 20.0% |
| !!! | AACAACAAGTTGAATAATTT+AGG | + | chr5_3:4694403-4694422 | Msa0792880:three_prime_UTR | 20.0% |
| !! | TCAAGGAGTTTTTGTATTAT+TGG | - | chr5_3:4688930-4688949 | None:intergenic | 25.0% |
| ! | AGAATGAAATGGAAATTGTT+GGG | - | chr5_3:4689083-4689102 | None:intergenic | 25.0% |
| ! | TAGAATGAAATGGAAATTGT+TGG | - | chr5_3:4689084-4689103 | None:intergenic | 25.0% |
| ! | TTATGCTTAGTAGAATGAAA+TGG | - | chr5_3:4689094-4689113 | None:intergenic | 25.0% |
| ! | TTAATAATACTTACGAGAGT+GGG | - | chr5_3:4689169-4689188 | None:intergenic | 25.0% |
| !!! | TTAACTCATTATTTCTGAGT+CGG | + | chr5_3:4689185-4689204 | Msa0792880:intron | 25.0% |
| !! | CAAAATCAATAGTTTTCTGA+TGG | - | chr5_3:4689474-4689493 | None:intergenic | 25.0% |
| ! | TGCAATGAATAATTTAACCT+TGG | - | chr5_3:4689551-4689570 | None:intergenic | 25.0% |
| ! | AAGAAGAATAGTTGTTAATC+CGG | - | chr5_3:4689618-4689637 | None:intergenic | 25.0% |
| !! | AACCAATTTTACTCAAAGAA+GGG | + | chr5_3:4689674-4689693 | Msa0792880:CDS | 25.0% |
| ! | ATTCCTCCTAAAATAACAAT+GGG | - | chr5_3:4689960-4689979 | None:intergenic | 25.0% |
| ! | GTTAAATGTCAAGTTATTGA+TGG | + | chr5_3:4690017-4690036 | Msa0792880:CDS | 25.0% |
| ! | TTCTATTTGTGTGTTATACA+AGG | - | chr5_3:4690750-4690769 | None:intergenic | 25.0% |
| !!! | TTATTTTGGCACATTTGATT+AGG | + | chr5_3:4691765-4691784 | Msa0792880:intron | 25.0% |
| !!! | TATTTTGGCACATTTGATTA+GGG | + | chr5_3:4691766-4691785 | Msa0792880:intron | 25.0% |
| ! | AAATATATAGGAGTAGATGA+CGG | + | chr5_3:4691947-4691966 | Msa0792880:intron | 25.0% |
| ! | AAGTGACTAAAAATTTGAGA+CGG | + | chr5_3:4692036-4692055 | Msa0792880:intron | 25.0% |
| !! | AATTGTGTACATCAATTTTC+CGG | + | chr5_3:4692119-4692138 | Msa0792880:intron | 25.0% |
| ! | TATGTGTGTTTCTCTAATAT+TGG | + | chr5_3:4692291-4692310 | Msa0792880:intron | 25.0% |
| ! | ATGTTTATGAAGGAATTCAT+TGG | + | chr5_3:4692325-4692344 | Msa0792880:intron | 25.0% |
| !!! | AATCCCGTTTTTAATAAAAC+AGG | + | chr5_3:4692560-4692579 | Msa0792880:intron | 25.0% |
| !!! | TCCTCCTGTTTTATTAAAAA+CGG | - | chr5_3:4692567-4692586 | None:intergenic | 25.0% |
| ! | TGATATAAAATATCCTCCAA+GGG | + | chr5_3:4692923-4692942 | Msa0792880:intron | 25.0% |
| ! | TTATATTTGTTTGTTTCCCT+TGG | - | chr5_3:4692942-4692961 | None:intergenic | 25.0% |
| ! | AAGGGAAACAAACAAATATA+AGG | + | chr5_3:4692941-4692960 | Msa0792880:intron | 25.0% |
| ! | AAAGCAAATATTGTTGAGTA+GGG | - | chr5_3:4693698-4693717 | None:intergenic | 25.0% |
| ! | GTGAAATAAGAAGTTATAGA+TGG | - | chr5_3:4693946-4693965 | None:intergenic | 25.0% |
| !! | TTCTTATTTCACTATTACAG+AGG | + | chr5_3:4693954-4693973 | Msa0792880:intron | 25.0% |
| ! | AGAGAATATCCATCAAAAAA+AGG | - | chr5_3:4694119-4694138 | None:intergenic | 25.0% |
| ! | TGGATAATATTCTTGGTTAA+AGG | + | chr5_3:4694278-4694297 | Msa0792880:exon | 25.0% |
| ! | GGATAATATTCTTGGTTAAA+GGG | + | chr5_3:4694279-4694298 | Msa0792880:exon | 25.0% |
| GAATGACACGAAAAAAATCA+AGG | - | chr5_3:4688947-4688966 | None:intergenic | 30.0% | |
| ATTCTACTAAGCATAAGCAT+AGG | + | chr5_3:4689098-4689117 | Msa0792880:CDS | 30.0% | |
| GTTAATAATACTTACGAGAG+TGG | - | chr5_3:4689170-4689189 | None:intergenic | 30.0% | |
| TTCTCCTCTACTATTTGTTT+AGG | + | chr5_3:4689255-4689274 | Msa0792880:intron | 30.0% | |
| TCTCCTCTACTATTTGTTTA+GGG | + | chr5_3:4689256-4689275 | Msa0792880:intron | 30.0% | |
| TTTCCCTAAACAAATAGTAG+AGG | - | chr5_3:4689262-4689281 | None:intergenic | 30.0% | |
| GGATTAACAACTATTCTTCT+TGG | + | chr5_3:4689617-4689636 | Msa0792880:intron | 30.0% | |
| TCTTTGAGTAAAATTGGTTG+TGG | - | chr5_3:4689673-4689692 | None:intergenic | 30.0% | |
| ! | CAACCAATTTTACTCAAAGA+AGG | + | chr5_3:4689673-4689692 | Msa0792880:CDS | 30.0% |
| ! | ACCAATTTTACTCAAAGAAG+GGG | + | chr5_3:4689675-4689694 | Msa0792880:CDS | 30.0% |
| TTCCTCCTAAAATAACAATG+GGG | - | chr5_3:4689959-4689978 | None:intergenic | 30.0% | |
| CATTCCTCCTAAAATAACAA+TGG | - | chr5_3:4689961-4689980 | None:intergenic | 30.0% | |
| TAAGTCAAAGACAAAAGACT+TGG | + | chr5_3:4689995-4690014 | Msa0792880:CDS | 30.0% | |
| AAATGTCAAGTTATTGATGG+CGG | + | chr5_3:4690020-4690039 | Msa0792880:CDS | 30.0% | |
| AGAATTATACCAGTTATGGA+AGG | - | chr5_3:4690098-4690117 | None:intergenic | 30.0% | |
| CAACAGAATTATACCAGTTA+TGG | - | chr5_3:4690102-4690121 | None:intergenic | 30.0% | |
| AGTAGCATAAAATTGTCAAC+TGG | - | chr5_3:4690199-4690218 | None:intergenic | 30.0% | |
| TGTGTTTATCTTCACAGAAA+AGG | + | chr5_3:4690225-4690244 | Msa0792880:intron | 30.0% | |
| TAGAGTGGTTTATGAGTTAA+AGG | + | chr5_3:4690318-4690337 | Msa0792880:CDS | 30.0% | |
| ! | TATGCGTGTTTCTTATTTCT+TGG | + | chr5_3:4690416-4690435 | Msa0792880:intron | 30.0% |
| ! | ATGCGTGTTTCTTATTTCTT+GGG | + | chr5_3:4690417-4690436 | Msa0792880:intron | 30.0% |
| ! | TATGGAATGAAGATTTGGTA+TGG | - | chr5_3:4690533-4690552 | None:intergenic | 30.0% |
| ! | GAAAGTATGGAATGAAGATT+TGG | - | chr5_3:4690538-4690557 | None:intergenic | 30.0% |
| !!! | CACTTTTAGTTTCTTTATCG+AGG | - | chr5_3:4690699-4690718 | None:intergenic | 30.0% |
| CTCGATAAAGAAACTAAAAG+TGG | + | chr5_3:4690697-4690716 | Msa0792880:intron | 30.0% | |
| !! | TCATCCATCAAGTTGAATAA+TGG | + | chr5_3:4691064-4691083 | Msa0792880:intron | 30.0% |
| TCTTCCATTATTCAACTTGA+TGG | - | chr5_3:4691071-4691090 | None:intergenic | 30.0% | |
| !! | TCAAGTTGAATAATGGAAGA+TGG | + | chr5_3:4691071-4691090 | Msa0792880:intron | 30.0% |
| !! | GGCATTTTGATATTGTAAGA+AGG | - | chr5_3:4691150-4691169 | None:intergenic | 30.0% |
| TATCAAAATGCCAGATTACT+AGG | + | chr5_3:4691158-4691177 | Msa0792880:intron | 30.0% | |
| AAATGTTAAATCAGCCATAG+CGG | - | chr5_3:4691412-4691431 | None:intergenic | 30.0% | |
| TAGAACTCAAAAGATGAAAC+TGG | - | chr5_3:4691572-4691591 | None:intergenic | 30.0% | |
| !!! | CTTTTGAGTTCTACTTTTGT+AGG | + | chr5_3:4691579-4691598 | Msa0792880:intron | 30.0% |
| AATAAAGGAACTTCTTCAAC+CGG | - | chr5_3:4691640-4691659 | None:intergenic | 30.0% | |
| !! | ACATGATATGTATGCCATTT+TGG | + | chr5_3:4691687-4691706 | Msa0792880:intron | 30.0% |
| CTATATACATGTCACCAAAA+TGG | - | chr5_3:4691704-4691723 | None:intergenic | 30.0% | |
| !! | CATTTTGGTGACATGTATAT+AGG | + | chr5_3:4691702-4691721 | Msa0792880:intron | 30.0% |
| AAACCACACTTATAATGAGA+TGG | - | chr5_3:4691874-4691893 | None:intergenic | 30.0% | |
| CTCATTATAAGTGTGGTTTA+AGG | + | chr5_3:4691875-4691894 | Msa0792880:intron | 30.0% | |
| TAGAGTTTCAATGTGATATG+TGG | + | chr5_3:4692363-4692382 | Msa0792880:intron | 30.0% | |
| AGTTCGTGTAAAACTTTACA+TGG | - | chr5_3:4692392-4692411 | None:intergenic | 30.0% | |
| ! | AAAGTTTTACACGAACTAGA+TGG | + | chr5_3:4692395-4692414 | Msa0792880:intron | 30.0% |
| !! | CCTCCTGTTTTATTAAAAAC+GGG | - | chr5_3:4692566-4692585 | None:intergenic | 30.0% |
| ! | ATATTTGTTGCCACAATAAC+TGG | - | chr5_3:4692621-4692640 | None:intergenic | 30.0% |
| GTGATATAAAATATCCTCCA+AGG | + | chr5_3:4692922-4692941 | Msa0792880:intron | 30.0% | |
| AACTTCAACTAAGCAAAGTT+TGG | + | chr5_3:4692977-4692996 | Msa0792880:intron | 30.0% | |
| ACTTCAACTAAGCAAAGTTT+GGG | + | chr5_3:4692978-4692997 | Msa0792880:intron | 30.0% | |
| ATCTGTTAAAGTTATGCATG+CGG | + | chr5_3:4693332-4693351 | Msa0792880:CDS | 30.0% | |
| AGAATCACTTCTTAAAACAC+TGG | - | chr5_3:4693376-4693395 | None:intergenic | 30.0% | |
| TTATGGAAGCTCAAATGATT+TGG | - | chr5_3:4693402-4693421 | None:intergenic | 30.0% | |
| AAATCATTTGAGCTTCCATA+AGG | + | chr5_3:4693401-4693420 | Msa0792880:CDS | 30.0% | |
| TTTCTGAACTAAGTACCTTA+TGG | - | chr5_3:4693419-4693438 | None:intergenic | 30.0% | |
| AACTACATATGTATGTCACA+AGG | - | chr5_3:4693449-4693468 | None:intergenic | 30.0% | |
| ATTATCAATCAAATCTACGG+TGG | - | chr5_3:4693518-4693537 | None:intergenic | 30.0% | |
| AGACATAATTGTTGCATGTA+AGG | - | chr5_3:4693603-4693622 | None:intergenic | 30.0% | |
| ! | CTATTCTTTTGAGCCATTAT+AGG | + | chr5_3:4693672-4693691 | Msa0792880:CDS | 30.0% |
| GAAAGCAAATATTGTTGAGT+AGG | - | chr5_3:4693699-4693718 | None:intergenic | 30.0% | |
| ! | TGTTTGTTTCTCCTAAACAA+TGG | - | chr5_3:4693856-4693875 | None:intergenic | 30.0% |
| ! | GAAACAAACAGTACTTGTTA+TGG | + | chr5_3:4693866-4693885 | Msa0792880:intron | 30.0% |
| TATTTCACTATTACAGAGGA+AGG | + | chr5_3:4693958-4693977 | Msa0792880:intron | 30.0% | |
| !!! | ATGCATCTTCCTTTTTTTGA+TGG | + | chr5_3:4694107-4694126 | Msa0792880:intron | 30.0% |
| TATGTTACTCTTGTTCAAAG+CGG | + | chr5_3:4694198-4694217 | Msa0792880:CDS | 30.0% | |
| AGGTTCATGGATAATATTCT+TGG | + | chr5_3:4694271-4694290 | Msa0792880:exon | 30.0% | |
| CTATGATTCATAGAAAGACT+TGG | - | chr5_3:4694359-4694378 | None:intergenic | 30.0% | |
| AAATTGTTGGGAGATGGAAT+TGG | - | chr5_3:4689071-4689090 | None:intergenic | 35.0% | |
| AAATGGAAATTGTTGGGAGA+TGG | - | chr5_3:4689077-4689096 | None:intergenic | 35.0% | |
| ACAAACTCTTCTTCGCTTTA+TGG | + | chr5_3:4689292-4689311 | Msa0792880:CDS | 35.0% | |
| CTCGTTTGAATATGTCACAT+GGG | + | chr5_3:4689437-4689456 | Msa0792880:CDS | 35.0% | |
| TCGTTTGAATATGTCACATG+GGG | + | chr5_3:4689438-4689457 | Msa0792880:CDS | 35.0% | |
| TAACAACTATTCTTCTTGGC+AGG | + | chr5_3:4689621-4689640 | Msa0792880:intron | 35.0% | |
| AACAACTATTCTTCTTGGCA+GGG | + | chr5_3:4689622-4689641 | Msa0792880:intron | 35.0% | |
| TCCCCTTCTTTGAGTAAAAT+TGG | - | chr5_3:4689679-4689698 | None:intergenic | 35.0% | |
| ! | TGATTTTGTCAATGATGTCG+AGG | + | chr5_3:4689762-4689781 | Msa0792880:CDS | 35.0% |
| !!! | TCTCTCCCCATTGTTATTTT+AGG | + | chr5_3:4689951-4689970 | Msa0792880:intron | 35.0% |
| TTATCTTCACAGAAAAGGAC+TGG | + | chr5_3:4690230-4690249 | Msa0792880:intron | 35.0% | |
| TATCTTCACAGAAAAGGACT+GGG | + | chr5_3:4690231-4690250 | Msa0792880:intron | 35.0% | |
| GACTGGGAAGATATCAAATT+CGG | + | chr5_3:4690247-4690266 | Msa0792880:CDS | 35.0% | |
| CTATGCTGTATCATTTGTCA+AGG | + | chr5_3:4690291-4690310 | Msa0792880:CDS | 35.0% | |
| CGGGATAAACAAGCATAAAA+AGG | - | chr5_3:4690382-4690401 | None:intergenic | 35.0% | |
| ! | TGCGTGTTTCTTATTTCTTG+GGG | + | chr5_3:4690418-4690437 | Msa0792880:intron | 35.0% |
| TATATCAGCATTGTGTCCTA+CGG | - | chr5_3:4690479-4690498 | None:intergenic | 35.0% | |
| TTATCGAGGACTATGTTCAT+AGG | - | chr5_3:4690685-4690704 | None:intergenic | 35.0% | |
| !! | GAGTTTGATGTAAGTTGATC+TGG | + | chr5_3:4690777-4690796 | Msa0792880:intron | 35.0% |
| AATGCACAACACTAAGACAA+GGG | - | chr5_3:4690908-4690927 | None:intergenic | 35.0% | |
| CATAACTCGATTGCATGAAA+TGG | - | chr5_3:4691002-4691021 | None:intergenic | 35.0% | |
| CATTTCATGCAATCGAGTTA+TGG | + | chr5_3:4691000-4691019 | Msa0792880:intron | 35.0% | |
| CGAGTTATGGTGAAAATTGT+CGG | + | chr5_3:4691013-4691032 | Msa0792880:intron | 35.0% | |
| TATCATACACACTACTTGCA+TGG | + | chr5_3:4691040-4691059 | Msa0792880:intron | 35.0% | |
| ! | AGTTGAATAATGGAAGATGG+TGG | + | chr5_3:4691074-4691093 | Msa0792880:intron | 35.0% |
| ! | GTTGAATAATGGAAGATGGT+GGG | + | chr5_3:4691075-4691094 | Msa0792880:intron | 35.0% |
| GTATACTGCAGACGTTATTA+AGG | + | chr5_3:4691180-4691199 | Msa0792880:intron | 35.0% | |
| TTTGGGTATCTGTATGAGTA+AGG | - | chr5_3:4691253-4691272 | None:intergenic | 35.0% | |
| CAGAGAATGTGGTTATCTTT+GGG | - | chr5_3:4691270-4691289 | None:intergenic | 35.0% | |
| ACAGAGAATGTGGTTATCTT+TGG | - | chr5_3:4691271-4691290 | None:intergenic | 35.0% | |
| AATGTTAAATCAGCCATAGC+GGG | - | chr5_3:4691411-4691430 | None:intergenic | 35.0% | |
| ! | GCTATGGCTGATTTAACATT+TGG | + | chr5_3:4691411-4691430 | Msa0792880:intron | 35.0% |
| TCTCCAAAATATAGACTCTG+AGG | - | chr5_3:4691488-4691507 | None:intergenic | 35.0% | |
| !! | AGTTCTACTTTTGTAGGCAA+TGG | + | chr5_3:4691585-4691604 | Msa0792880:intron | 35.0% |
| TGAAGAAGTTCCTTTATTGC+AGG | + | chr5_3:4691642-4691661 | Msa0792880:CDS | 35.0% | |
| CATCAGATTACCTGCAATAA+AGG | - | chr5_3:4691655-4691674 | None:intergenic | 35.0% | |
| ! | TATTAGATTTTCCCAGTGAC+TGG | - | chr5_3:4691803-4691822 | None:intergenic | 35.0% |
| ! | ATGGTGGAACTCTTACATAT+AGG | + | chr5_3:4692414-4692433 | Msa0792880:intron | 35.0% |
| ! | TTCACTGATATTTAGGACGT+AGG | + | chr5_3:4692506-4692525 | Msa0792880:intron | 35.0% |
| !! | CCCGTTTTTAATAAAACAGG+AGG | + | chr5_3:4692563-4692582 | Msa0792880:intron | 35.0% |
| AATGCAAAAGCCAGTTATTG+TGG | + | chr5_3:4692608-4692627 | Msa0792880:CDS | 35.0% | |
| ATTGCAATTGCAGTAAGACA+AGG | + | chr5_3:4692693-4692712 | Msa0792880:CDS | 35.0% | |
| TATTTGTTTGTTTCCCTTGG+AGG | - | chr5_3:4692939-4692958 | None:intergenic | 35.0% | |
| ATTCAGACAAATTCCCGTTT+CGG | - | chr5_3:4693019-4693038 | None:intergenic | 35.0% | |
| ! | AAGCATTGTTCTCCAAAACA+AGG | - | chr5_3:4693116-4693135 | None:intergenic | 35.0% |
| !! | TTTTGGAGAACAATGCTTTC+AGG | + | chr5_3:4693118-4693137 | Msa0792880:intron | 35.0% |
| !!! | AGTTATTTTTCGTCCTGCTA+TGG | + | chr5_3:4693168-4693187 | Msa0792880:intron | 35.0% |
| TACATATGTATGTCACAAGG+AGG | - | chr5_3:4693446-4693465 | None:intergenic | 35.0% | |
| ! | ACATTTTTGACAGAGCCATA+TGG | + | chr5_3:4693565-4693584 | Msa0792880:intron | 35.0% |
| ! | CATTTTTGACAGAGCCATAT+GGG | + | chr5_3:4693566-4693585 | Msa0792880:intron | 35.0% |
| GTTCTGGTGAACACAATAAT+AGG | - | chr5_3:4693641-4693660 | None:intergenic | 35.0% | |
| ATTATTGTGTTCACCAGAAC+TGG | + | chr5_3:4693641-4693660 | Msa0792880:CDS | 35.0% | |
| ! | TCAGCTGACGTATATTTTTC+TGG | - | chr5_3:4693801-4693820 | None:intergenic | 35.0% |
| TAAACAATGGTGAGGACAAA+AGG | - | chr5_3:4693843-4693862 | None:intergenic | 35.0% | |
| ! | TTTTGTCCTCACCATTGTTT+AGG | + | chr5_3:4693842-4693861 | Msa0792880:intron | 35.0% |
| ! | GCAATTTTCAAATGATGCTG+AGG | + | chr5_3:4694028-4694047 | Msa0792880:CDS | 35.0% |
| AAAAGGAAGATGCATGCAAT+TGG | - | chr5_3:4694102-4694121 | None:intergenic | 35.0% | |
| AGTAAAGGTCATTTAGACGA+GGG | + | chr5_3:4694171-4694190 | Msa0792880:CDS | 35.0% | |
| AAGTGAGAGAGGAAAAGAAA+AGG | - | chr5_3:4694332-4694351 | None:intergenic | 35.0% | |
| GATTTGAAGAGAGAAGACGT+GGG | - | chr5_3:4689019-4689038 | None:intergenic | 40.0% | |
| AGATTTGAAGAGAGAAGACG+TGG | - | chr5_3:4689020-4689039 | None:intergenic | 40.0% | |
| GCTCGTTTGAATATGTCACA+TGG | + | chr5_3:4689436-4689455 | Msa0792880:CDS | 40.0% | |
| ! | TAGTTTTCTGATGGGAAGTG+TGG | - | chr5_3:4689465-4689484 | None:intergenic | 40.0% |
| TTTGTCAATGATGTCGAGGT+TGG | + | chr5_3:4689766-4689785 | Msa0792880:CDS | 40.0% | |
| GAGATTCGGATAATCGAGTT+AGG | - | chr5_3:4689926-4689945 | None:intergenic | 40.0% | |
| !!! | CTCCCCATTGTTATTTTAGG+AGG | + | chr5_3:4689954-4689973 | Msa0792880:intron | 40.0% |
| TTTAGGAGGAATGATGTCTC+TGG | + | chr5_3:4689968-4689987 | Msa0792880:intron | 40.0% | |
| ! | ATGGCGGAGAATTGAAATCT+AGG | + | chr5_3:4690036-4690055 | Msa0792880:CDS | 40.0% |
| ATCGATTGCAGATAGGCAAT+AGG | + | chr5_3:4690134-4690153 | Msa0792880:intron | 40.0% | |
| ATTTGTCAAGGATGCTAGAG+TGG | + | chr5_3:4690303-4690322 | Msa0792880:CDS | 40.0% | |
| TTTATCCCGTTGTGTGAATC+TGG | + | chr5_3:4690393-4690412 | Msa0792880:intron | 40.0% | |
| TCCATACTTTCAGCTTCAGA+TGG | + | chr5_3:4690547-4690566 | Msa0792880:CDS | 40.0% | |
| CCATACTTTCAGCTTCAGAT+GGG | + | chr5_3:4690548-4690567 | Msa0792880:CDS | 40.0% | |
| CATACTTTCAGCTTCAGATG+GGG | + | chr5_3:4690549-4690568 | Msa0792880:CDS | 40.0% | |
| GAGCAAGTCTCAGATTCTTA+CGG | + | chr5_3:4690825-4690844 | Msa0792880:intron | 40.0% | |
| AGCAAGTCTCAGATTCTTAC+GGG | + | chr5_3:4690826-4690845 | Msa0792880:intron | 40.0% | |
| ATGCACAACACTAAGACAAG+GGG | - | chr5_3:4690907-4690926 | None:intergenic | 40.0% | |
| GAATGCACAACACTAAGACA+AGG | - | chr5_3:4690909-4690928 | None:intergenic | 40.0% | |
| ATATGTTCTGCTTCACAGCA+TGG | + | chr5_3:4690932-4690951 | Msa0792880:intron | 40.0% | |
| TCACAGCATGGTGCATTATA+TGG | + | chr5_3:4690944-4690963 | Msa0792880:intron | 40.0% | |
| !!! | AATGGAAGATGGTGGGTTTT+TGG | + | chr5_3:4691082-4691101 | Msa0792880:intron | 40.0% |
| !! | GTTTGTTTCTGCACTATTGC+TGG | + | chr5_3:4691110-4691129 | Msa0792880:intron | 40.0% |
| CTGCAGTATACCTAGTAATC+TGG | - | chr5_3:4691171-4691190 | None:intergenic | 40.0% | |
| CTGCAGACGTTATTAAGGTT+TGG | + | chr5_3:4691185-4691204 | Msa0792880:intron | 40.0% | |
| GGCAGGTTCAAACTAATTCA+GGG | - | chr5_3:4691441-4691460 | None:intergenic | 40.0% | |
| ! | ATTAGTTTGAACCTGCCGAT+AGG | + | chr5_3:4691444-4691463 | Msa0792880:intron | 40.0% |
| !! | GAGGGTATTGGAAAACCTAT+CGG | - | chr5_3:4691462-4691481 | None:intergenic | 40.0% |
| ! | ATAGGTTTTCCAATACCCTC+AGG | + | chr5_3:4691462-4691481 | Msa0792880:intron | 40.0% |
| ! | AGGCCTCAGAGTCTATATTT+TGG | + | chr5_3:4691482-4691501 | Msa0792880:intron | 40.0% |
| CCACACTTATAATGAGATGG+AGG | - | chr5_3:4691871-4691890 | None:intergenic | 40.0% | |
| CCTCCATCTCATTATAAGTG+TGG | + | chr5_3:4691868-4691887 | Msa0792880:intron | 40.0% | |
| GACACTCATAATGAGACTGA+TGG | + | chr5_3:4692076-4692095 | Msa0792880:intron | 40.0% | |
| GTTGCACTAAACGTTAACGA+TGG | + | chr5_3:4692170-4692189 | Msa0792880:intron | 40.0% | |
| GAAAGCAGTGAACTAAACGA+CGG | + | chr5_3:4692197-4692216 | Msa0792880:intron | 40.0% | |
| TAAGACCTCTCAGTTGAGAA+AGG | - | chr5_3:4692223-4692242 | None:intergenic | 40.0% | |
| AGAGGTCTTACCTTTCATAG+AGG | + | chr5_3:4692233-4692252 | Msa0792880:intron | 40.0% | |
| GAGGTCTTACCTTTCATAGA+GGG | + | chr5_3:4692234-4692253 | Msa0792880:intron | 40.0% | |
| TCTATTACGCCCTCTATGAA+AGG | - | chr5_3:4692246-4692265 | None:intergenic | 40.0% | |
| ! | GTTTTACACGAACTAGATGG+TGG | + | chr5_3:4692398-4692417 | Msa0792880:intron | 40.0% |
| GGATTGAGCTACATAGAACA+TGG | - | chr5_3:4692545-4692564 | None:intergenic | 40.0% | |
| !!! | TAACTGGCTTTTGCATTCTG+AGG | - | chr5_3:4692605-4692624 | None:intergenic | 40.0% |
| TTATTCATCCCACACCAACT+AGG | + | chr5_3:4692655-4692674 | Msa0792880:CDS | 40.0% | |
| TATTCATCCCACACCAACTA+GGG | + | chr5_3:4692656-4692675 | Msa0792880:CDS | 40.0% | |
| !! | GAAAGTGTGTTTGCTATCCT+CGG | + | chr5_3:4692754-4692773 | Msa0792880:intron | 40.0% |
| ATTTCTCTGCATGTCCGAAA+CGG | + | chr5_3:4693002-4693021 | Msa0792880:intron | 40.0% | |
| !! | CTGCAGACTTAACCTTGTTT+TGG | + | chr5_3:4693101-4693120 | Msa0792880:intron | 40.0% |
| !! | TTAGGTTTTGTAGCCATAGC+AGG | - | chr5_3:4693184-4693203 | None:intergenic | 40.0% |
| TGTTAAAGTTATGCATGCGG+TGG | + | chr5_3:4693335-4693354 | Msa0792880:CDS | 40.0% | |
| ATGGCTCAAAAGAATAGCCA+TGG | - | chr5_3:4693669-4693688 | None:intergenic | 40.0% | |
| TTGTTGAGTAGGGCCTATAA+TGG | - | chr5_3:4693688-4693707 | None:intergenic | 40.0% | |
| GTTTCTCCTAAACAATGGTG+AGG | - | chr5_3:4693851-4693870 | None:intergenic | 40.0% | |
| ! | TAGTTTGAGAGCTCTAGCAA+AGG | - | chr5_3:4694057-4694076 | None:intergenic | 40.0% |
| TAGAGCTCTCAAACTACTGT+TGG | + | chr5_3:4694061-4694080 | Msa0792880:CDS | 40.0% | |
| CTTCTTATGCTGCAGAGTAA+AGG | + | chr5_3:4694156-4694175 | Msa0792880:intron | 40.0% | |
| GAGTAAAGGTCATTTAGACG+AGG | + | chr5_3:4694170-4694189 | Msa0792880:intron | 40.0% | |
| GTAAAGGTCATTTAGACGAG+GGG | + | chr5_3:4694172-4694191 | Msa0792880:CDS | 40.0% | |
| TTGTTGGGAGATGGAATTGG+AGG | - | chr5_3:4689068-4689087 | None:intergenic | 45.0% | |
| TGGTTGGAGGAGGTTATTTG+GGG | - | chr5_3:4689142-4689161 | None:intergenic | 45.0% | |
| CTGGTTGGAGGAGGTTATTT+GGG | - | chr5_3:4689143-4689162 | None:intergenic | 45.0% | |
| ACTGGTTGGAGGAGGTTATT+TGG | - | chr5_3:4689144-4689163 | None:intergenic | 45.0% | |
| CTTCTTCGCTTTATGGTACG+TGG | + | chr5_3:4689299-4689318 | Msa0792880:CDS | 45.0% | |
| TTTATGGTACGTGGCGAACA+GGG | + | chr5_3:4689308-4689327 | Msa0792880:CDS | 45.0% | |
| ATGTCACGTGAGCTAGTAGA+TGG | - | chr5_3:4689382-4689401 | None:intergenic | 45.0% | |
| CTAGCTCACGTGACATGATT+TGG | + | chr5_3:4689386-4689405 | Msa0792880:CDS | 45.0% | |
| ATTTGGAAGCTCGCTCAAAC+TGG | + | chr5_3:4689403-4689422 | Msa0792880:CDS | 45.0% | |
| CGCTCAAACTGGAATGAATG+TGG | + | chr5_3:4689414-4689433 | Msa0792880:CDS | 45.0% | |
| TTCCATCATGCTTGACACCA+AGG | + | chr5_3:4689531-4689550 | Msa0792880:CDS | 45.0% | |
| !! | AACCTTGGTGTCAAGCATGA+TGG | - | chr5_3:4689536-4689555 | None:intergenic | 45.0% |
| AGGGTCCTGAAGTTAGAAGT+GGG | + | chr5_3:4689641-4689660 | Msa0792880:intron | 45.0% | |
| ACATCCCCACTTCTAACTTC+AGG | - | chr5_3:4689649-4689668 | None:intergenic | 45.0% | |
| GGGGAGAGAATCAAGAGATT+CGG | - | chr5_3:4689940-4689959 | None:intergenic | 45.0% | |
| AGGCGTCATTTGAATGTTCG+TGG | + | chr5_3:4690056-4690075 | Msa0792880:CDS | 45.0% | |
| GTCCTTGATCGATTGCAGAT+AGG | + | chr5_3:4690127-4690146 | Msa0792880:intron | 45.0% | |
| TGCCTATCTGCAATCGATCA+AGG | - | chr5_3:4690132-4690151 | None:intergenic | 45.0% | |
| GCATACCAGATTCACACAAC+GGG | - | chr5_3:4690401-4690420 | None:intergenic | 45.0% | |
| CGCATACCAGATTCACACAA+CGG | - | chr5_3:4690402-4690421 | None:intergenic | 45.0% | |
| ! | CCCATCTGAAGCTGAAAGTA+TGG | - | chr5_3:4690551-4690570 | None:intergenic | 45.0% |
| GCAAGTCTCAGATTCTTACG+GGG | + | chr5_3:4690827-4690846 | Msa0792880:intron | 45.0% | |
| GATAACCACATTCTCTGTGC+AGG | + | chr5_3:4691273-4691292 | Msa0792880:intron | 45.0% | |
| CGGCAGGTTCAAACTAATTC+AGG | - | chr5_3:4691442-4691461 | None:intergenic | 45.0% | |
| GTATTGGAAAACCTATCGGC+AGG | - | chr5_3:4691458-4691477 | None:intergenic | 45.0% | |
| !! | ATATAGACTCTGAGGCCTGA+GGG | - | chr5_3:4691480-4691499 | None:intergenic | 45.0% |
| !! | AATATAGACTCTGAGGCCTG+AGG | - | chr5_3:4691481-4691500 | None:intergenic | 45.0% |
| GTTTAGTGCAACAGCTATGC+AGG | - | chr5_3:4692162-4692181 | None:intergenic | 45.0% | |
| GCAAACACACTTTCCATGTG+CGG | - | chr5_3:4692748-4692767 | None:intergenic | 45.0% | |
| TTTCTCTGCATGTCCGAAAC+GGG | + | chr5_3:4693003-4693022 | Msa0792880:intron | 45.0% | |
| AGGCAAACATTGCTCCCATA+TGG | - | chr5_3:4693583-4693602 | None:intergenic | 45.0% | |
| AATAGCCATGGATCCAGTTC+TGG | - | chr5_3:4693657-4693676 | None:intergenic | 45.0% | |
| ACAGAGGAAGGATTAAGCAG+AGG | + | chr5_3:4693970-4693989 | Msa0792880:intron | 45.0% | |
| AGGAAGGATTAAGCAGAGGT+TGG | + | chr5_3:4693974-4693993 | Msa0792880:CDS | 45.0% | |
| GGAAGGATTAAGCAGAGGTT+GGG | + | chr5_3:4693975-4693994 | Msa0792880:CDS | 45.0% | |
| GCGAACTTGAATGTGGTGAA+TGG | - | chr5_3:4694250-4694269 | None:intergenic | 45.0% | |
| ! | ATTCAAGTTCGCGAGGTTCA+TGG | + | chr5_3:4694258-4694277 | Msa0792880:CDS | 45.0% |
| ! | GACTTGGTTACAAGTGAGAG+AGG | - | chr5_3:4694343-4694362 | None:intergenic | 45.0% |
| GGTTGGAGGAGGTTATTTGG+GGG | - | chr5_3:4689141-4689160 | None:intergenic | 50.0% | |
| TACTTACGAGAGTGGGAGAC+TGG | - | chr5_3:4689162-4689181 | None:intergenic | 50.0% | |
| CTTTATGGTACGTGGCGAAC+AGG | + | chr5_3:4689307-4689326 | Msa0792880:CDS | 50.0% | |
| TTATGGTACGTGGCGAACAG+GGG | + | chr5_3:4689309-4689328 | Msa0792880:CDS | 50.0% | |
| ACGAAGATCGTGTGCACGAT+TGG | + | chr5_3:4689355-4689374 | Msa0792880:CDS | 50.0% | |
| ACCAAACACGACACTGACAC+CGG | + | chr5_3:4689596-4689615 | Msa0792880:intron | 50.0% | |
| CAGGGTCCTGAAGTTAGAAG+TGG | + | chr5_3:4689640-4689659 | Msa0792880:intron | 50.0% | |
| GGGTCCTGAAGTTAGAAGTG+GGG | + | chr5_3:4689642-4689661 | Msa0792880:intron | 50.0% | |
| GCAACGCTTCCTTCCATAAC+TGG | + | chr5_3:4690086-4690105 | Msa0792880:CDS | 50.0% | |
| CAAAGCCTGCACAGAGAATG+TGG | - | chr5_3:4691281-4691300 | None:intergenic | 50.0% | |
| TCGCTGAAAACTTCCCGCTA+TGG | + | chr5_3:4691395-4691414 | Msa0792880:intron | 50.0% | |
| TTGTAGGCAATGGTTGCTCG+TGG | + | chr5_3:4691595-4691614 | Msa0792880:intron | 50.0% | |
| TGTAGGCAATGGTTGCTCGT+GGG | + | chr5_3:4691596-4691615 | Msa0792880:intron | 50.0% | |
| ATGCAGTAGCTCCAGTCACT+GGG | + | chr5_3:4691789-4691808 | Msa0792880:intron | 50.0% | |
| GCTGATGCTGTCATGCTTTC+AGG | + | chr5_3:4692717-4692736 | Msa0792880:CDS | 50.0% | |
| CTTTCAGGAGAAACCGCACA+TGG | + | chr5_3:4692732-4692751 | Msa0792880:CDS | 50.0% | |
| !! | AGTGTGTTTGCTATCCTCGG+TGG | + | chr5_3:4692757-4692776 | Msa0792880:intron | 50.0% |
| ! | TTATGCATGCGGTGGCTCTA+AGG | + | chr5_3:4693343-4693362 | Msa0792880:CDS | 50.0% |
| GTTCACCAGAACTGGATCCA+TGG | + | chr5_3:4693649-4693668 | Msa0792880:CDS | 50.0% | |
| AAAGCGGAGCACAACCAATC+TGG | + | chr5_3:4694214-4694233 | Msa0792880:CDS | 50.0% | |
| ! | TCACCACATTCAAGTTCGCG+AGG | + | chr5_3:4694251-4694270 | Msa0792880:CDS | 50.0% |
| GAACCTCGCGAACTTGAATG+TGG | - | chr5_3:4694257-4694276 | None:intergenic | 50.0% | |
| ATTTGGGGGACGCGTTTGGA+TGG | - | chr5_3:4689127-4689146 | None:intergenic | 55.0% | |
| GGTTATTTGGGGGACGCGTT+TGG | - | chr5_3:4689131-4689150 | None:intergenic | 55.0% | |
| TACGAGAGTGGGAGACTGGT+TGG | - | chr5_3:4689158-4689177 | None:intergenic | 55.0% | |
| ! | TCCGGTGTCAGTGTCGTGTT+TGG | - | chr5_3:4689600-4689619 | None:intergenic | 55.0% |
| GGAGACGTTCTTCTCGTCGA+TGG | + | chr5_3:4689787-4689806 | Msa0792880:CDS | 55.0% | |
| !! | ACTCTGAGGCCTGAGGGTAT+TGG | - | chr5_3:4691474-4691493 | None:intergenic | 55.0% |
| GTAGGCAATGGTTGCTCGTG+GGG | + | chr5_3:4691597-4691616 | Msa0792880:intron | 55.0% | |
| GGACCTTGGAGCTGAACTTC+CGG | + | chr5_3:4691618-4691637 | Msa0792880:CDS | 55.0% | |
| CAACCGGAAGTTCAGCTCCA+AGG | - | chr5_3:4691624-4691643 | None:intergenic | 55.0% | |
| GATGCAGTAGCTCCAGTCAC+TGG | + | chr5_3:4691788-4691807 | Msa0792880:intron | 55.0% | |
| CTATGCAGGCAGCAGAGAAG+GGG | - | chr5_3:4692148-4692167 | None:intergenic | 55.0% | |
| GCTATGCAGGCAGCAGAGAA+GGG | - | chr5_3:4692149-4692168 | None:intergenic | 55.0% | |
| AGCTATGCAGGCAGCAGAGA+AGG | - | chr5_3:4692150-4692169 | None:intergenic | 55.0% | |
| GACGGCCTTTCTCAACTGAG+AGG | + | chr5_3:4692215-4692234 | Msa0792880:intron | 55.0% | |
| TCATCCCACACCAACTAGGG+CGG | + | chr5_3:4692659-4692678 | Msa0792880:CDS | 55.0% | |
| ! | ACTTCCGCCCTAGTTGGTGT+GGG | - | chr5_3:4692666-4692685 | None:intergenic | 55.0% |
| ! | TCTGAGACTTCCGCCCTAGT+TGG | - | chr5_3:4692672-4692691 | None:intergenic | 55.0% |
| ! | TTTGCTATCCTCGGTGGCCA+TGG | + | chr5_3:4692763-4692782 | Msa0792880:intron | 55.0% |
| AAAAGGAACCATGGCCACCG+AGG | - | chr5_3:4692774-4692793 | None:intergenic | 55.0% | |
| TGCTGCAGACTAGAGCGTAG+AGG | + | chr5_3:4693487-4693506 | Msa0792880:intron | 55.0% | |
| AGCACAACCAATCTGGCGTG+CGG | + | chr5_3:4694221-4694240 | Msa0792880:CDS | 55.0% | |
| ATGGATTCCGCACGCCAGAT+TGG | - | chr5_3:4694231-4694250 | None:intergenic | 55.0% | |
| ! | AGTGGGAGACTGGTTGGAGG+AGG | - | chr5_3:4689152-4689171 | None:intergenic | 60.0% |
| ! | GAGAGTGGGAGACTGGTTGG+AGG | - | chr5_3:4689155-4689174 | None:intergenic | 60.0% |
| ATGGTTGCTCGTGGGGACCT+TGG | + | chr5_3:4691604-4691623 | Msa0792880:CDS | 60.0% | |
| GGCAGCAGAGAAGGGGATTC+CGG | - | chr5_3:4692141-4692160 | None:intergenic | 60.0% | |
| ! | GACTTCCGCCCTAGTTGGTG+TGG | - | chr5_3:4692667-4692686 | None:intergenic | 60.0% |
| GGTACGTGGCGAACAGGGGA+AGG | + | chr5_3:4689313-4689332 | Msa0792880:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 4688920 | 4694468 | 4688920 | ID=Msa0792880;Name=Msa0792880 |
| chr5_3 | mRNA | 4688920 | 4694468 | 4688920 | ID=Msa0792880-mRNA-1;Parent=Msa0792880;Name=Msa0792880-mRNA-1;_AED=0.17;_eAED=0.17;_QI=72|1|1|1|1|1|12|184|557 |
| chr5_3 | exon | 4688920 | 4689174 | 4688920 | ID=Msa0792880-mRNA-1:exon:1828;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4689277 | 4689552 | 4689277 | ID=Msa0792880-mRNA-1:exon:1829;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4689643 | 4689808 | 4689643 | ID=Msa0792880-mRNA-1:exon:1830;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4689973 | 4690107 | 4689973 | ID=Msa0792880-mRNA-1:exon:1831;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4690242 | 4690352 | 4690242 | ID=Msa0792880-mRNA-1:exon:1832;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4690482 | 4690570 | 4690482 | ID=Msa0792880-mRNA-1:exon:1833;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4691601 | 4691663 | 4691601 | ID=Msa0792880-mRNA-1:exon:1834;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4692582 | 4692757 | 4692582 | ID=Msa0792880-mRNA-1:exon:1835;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4693320 | 4693422 | 4693320 | ID=Msa0792880-mRNA-1:exon:1836;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4693578 | 4693726 | 4693578 | ID=Msa0792880-mRNA-1:exon:1837;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4693974 | 4694082 | 4693974 | ID=Msa0792880-mRNA-1:exon:1838;Parent=Msa0792880-mRNA-1 |
| chr5_3 | exon | 4694171 | 4694468 | 4694171 | ID=Msa0792880-mRNA-1:exon:1839;Parent=Msa0792880-mRNA-1 |
| chr5_3 | five_prime_UTR | 4688920 | 4688991 | 4688920 | ID=Msa0792880-mRNA-1:five_prime_utr;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4688992 | 4689174 | 4688992 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4689277 | 4689552 | 4689277 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4689643 | 4689808 | 4689643 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4689973 | 4690107 | 4689973 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4690242 | 4690352 | 4690242 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4690482 | 4690570 | 4690482 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4691601 | 4691663 | 4691601 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4692582 | 4692757 | 4692582 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4693320 | 4693422 | 4693320 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4693578 | 4693726 | 4693578 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4693974 | 4694082 | 4693974 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | CDS | 4694171 | 4694284 | 4694171 | ID=Msa0792880-mRNA-1:cds;Parent=Msa0792880-mRNA-1 |
| chr5_3 | three_prime_UTR | 4694285 | 4694468 | 4694285 | ID=Msa0792880-mRNA-1:three_prime_utr;Parent=Msa0792880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
