AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0117560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0117560 MtrunA17_Chr1g0174441 87.679 349 14 3 1 320 20 368 0.0 607
Msa0117560 MtrunA17_Chr1g0174441 53.642 302 67 5 342 571 27 327 2.12e-89 286
Msa0117560 MtrunA17_Chr1g0174441 81.579 38 7 0 572 609 497 534 2.27e-14 76.3
Msa0117560 MtrunA17_Chr1g0174461 65.330 349 89 5 1 320 1 346 3.04e-151 446
Msa0117560 MtrunA17_Chr1g0174461 53.177 299 70 3 342 571 8 305 3.91e-94 298
Msa0117560 MtrunA17_Chr1g0174461 76.316 38 9 0 572 609 475 512 8.85e-13 70.9
Msa0117560 MtrunA17_Chr1g0174451 64.000 350 93 6 1 320 1 347 5.89e-145 429
Msa0117560 MtrunA17_Chr1g0174451 73.579 299 10 2 342 571 8 306 3.10e-139 415
Msa0117560 MtrunA17_Chr1g0174451 97.368 38 1 0 572 609 476 513 4.88e-18 87.4
Msa0117560 MtrunA17_Chr1g0174471 57.838 370 120 8 1 338 16 381 5.72e-133 399
Msa0117560 MtrunA17_Chr1g0174471 55.482 301 61 6 342 571 23 321 4.05e-90 288
Msa0117560 MtrunA17_Chr1g0174481 55.163 368 127 8 1 338 1 360 5.81e-124 375
Msa0117560 MtrunA17_Chr1g0174481 53.247 308 67 6 342 577 7 309 3.89e-91 290
Msa0117560 MtrunA17_Chr8g0362701 56.757 370 122 9 1 338 1 364 4.87e-119 363
Msa0117560 MtrunA17_Chr8g0362701 52.649 302 66 8 342 571 8 304 2.40e-75 249
Msa0117560 MtrunA17_Chr7g0258221 50.136 369 148 8 1 338 1 364 5.03e-104 324
Msa0117560 MtrunA17_Chr7g0258221 44.667 300 93 5 342 571 8 304 6.68e-67 226
Msa0117560 MtrunA17_Chr8g0362481 58.571 280 81 7 72 320 1 276 2.11e-97 305
Msa0117560 MtrunA17_Chr8g0362481 60.335 179 44 5 417 571 60 235 8.77e-54 189
Msa0117560 MtrunA17_Chr3g0084921 39.353 371 188 8 1 338 1 367 1.37e-81 266
Msa0117560 MtrunA17_Chr3g0084921 36.449 321 125 10 344 591 10 324 1.65e-53 191
Msa0117560 MtrunA17_Chr4g0030701 40.491 326 156 7 29 320 28 349 1.88e-70 236
Msa0117560 MtrunA17_Chr4g0030701 31.560 282 119 4 363 571 28 308 2.65e-35 140
Msa0117560 MtrunA17_Chr7g0235551 38.395 349 180 7 1 320 1 343 1.04e-67 229
Msa0117560 MtrunA17_Chr7g0235551 29.102 323 150 7 342 590 8 325 5.12e-30 124
Msa0117560 MtrunA17_Chr7g0224561 39.108 381 166 14 10 345 10 369 2.65e-67 228
Msa0117560 MtrunA17_Chr7g0224561 35.556 315 129 11 341 585 3 313 6.11e-39 150
Msa0117560 MtrunA17_Chr7g0224551 38.845 381 167 14 10 345 10 369 3.40e-67 228
Msa0117560 MtrunA17_Chr7g0224551 35.737 319 123 12 341 585 3 313 1.79e-38 149
Msa0117560 MtrunA17_Chr1g0174421 39.748 317 155 9 1 287 13 323 2.50e-66 220
Msa0117560 MtrunA17_Chr1g0174421 36.877 301 115 6 342 572 20 315 1.74e-56 194
Msa0117560 MtrunA17_Chr4g0030711 37.830 341 167 8 46 345 48 384 1.08e-65 224
Msa0117560 MtrunA17_Chr4g0030711 30.189 265 110 4 381 571 48 311 6.46e-29 121
Msa0117560 MtrunA17_Chr1g0207841 37.994 329 164 7 46 338 49 373 2.47e-62 215
Msa0117560 MtrunA17_Chr1g0207841 30.451 266 109 4 381 571 49 313 8.62e-29 120
Msa0117560 MtrunA17_Chr4g0030741 36.607 336 168 9 1 304 27 349 7.64e-54 187
Msa0117560 MtrunA17_Chr4g0030741 34.084 311 135 8 342 585 34 341 1.23e-35 137
Msa0117560 MtrunA17_Chr5g0403351 32.362 343 194 11 2 314 3 337 1.01e-51 186
Msa0117560 MtrunA17_Chr5g0403351 24.923 325 160 8 337 587 7 321 2.19e-22 100
Msa0117560 MtrunA17_Chr8g0390881 32.295 353 193 10 1 319 3 343 1.24e-51 185
Msa0117560 MtrunA17_Chr5g0403321 33.621 348 191 11 36 346 35 379 5.29e-51 184
Msa0117560 MtrunA17_Chr5g0403321 24.908 273 131 6 371 571 35 305 1.83e-18 89.0
Msa0117560 MtrunA17_Chr4g0046321 33.967 368 182 14 23 345 21 372 7.36e-50 181
Msa0117560 MtrunA17_Chr4g0046321 27.957 279 131 7 360 571 24 299 5.59e-25 108
Msa0117560 MtrunA17_Chr5g0403331 33.987 306 172 8 36 314 36 338 1.10e-49 180
Msa0117560 MtrunA17_Chr5g0403331 25.172 290 141 7 371 587 36 322 2.23e-18 88.6
Msa0117560 MtrunA17_Chr7g0258211 34.097 349 188 10 2 319 6 343 3.77e-49 179
Msa0117560 MtrunA17_Chr7g0258211 26.236 263 117 6 379 571 48 303 1.64e-19 92.0
Msa0117560 MtrunA17_Chr4g0046351 34.639 332 171 11 23 320 21 340 5.86e-49 178
Msa0117560 MtrunA17_Chr4g0046351 29.032 279 128 8 360 571 24 299 6.39e-26 112
Msa0117560 MtrunA17_Chr3g0101661 31.897 348 194 10 6 320 7 344 2.68e-48 176
Msa0117560 MtrunA17_Chr4g0046331 33.429 350 184 12 8 320 3 340 3.02e-48 176
Msa0117560 MtrunA17_Chr4g0046331 29.703 303 140 10 337 571 2 299 1.60e-26 114
Msa0117560 MtrunA17_Chr3g0101691 30.205 341 201 8 9 320 13 345 4.43e-47 172
Msa0117560 MtrunA17_Chr3g0101691 24.281 313 158 10 341 579 8 315 2.91e-18 88.2
Msa0117560 MtrunA17_Chr8g0344151 29.351 385 218 10 1 343 6 378 4.97e-47 172
Msa0117560 MtrunA17_Chr8g0344151 27.134 328 150 11 341 587 3 322 1.75e-23 104
Msa0117560 MtrunA17_Chr3g0116681 29.586 338 211 7 4 318 8 341 7.03e-47 172
Msa0117560 MtrunA17_Chr8g0351801 31.746 315 177 7 46 326 45 355 9.38e-47 172
Msa0117560 MtrunA17_Chr8g0351801 31.401 207 106 6 391 571 112 308 7.07e-22 99.8
Msa0117560 MtrunA17_Chr3g0101751 29.565 345 208 7 1 317 8 345 9.65e-47 172
Msa0117560 MtrunA17_Chr3g0101751 22.531 324 178 8 337 590 10 330 3.26e-20 94.4
Msa0117560 MtrunA17_Chr3g0101711 31.792 346 197 9 6 320 7 344 1.23e-46 171
Msa0117560 MtrunA17_Chr3g0101711 24.595 309 157 9 341 577 8 312 8.67e-20 92.8
Msa0117560 MtrunA17_Chr5g0430111 30.857 350 197 10 11 326 12 350 2.53e-46 169
Msa0117560 MtrunA17_Chr4g0076161 31.686 344 195 10 10 325 14 345 2.66e-46 171
Msa0117560 MtrunA17_Chr6g0484811 29.446 343 196 9 10 319 14 343 1.37e-45 169
Msa0117560 MtrunA17_Chr3g0101821 28.739 341 216 6 1 317 1 338 2.23e-45 168
Msa0117560 MtrunA17_Chr3g0101821 22.981 322 175 7 337 588 3 321 3.54e-20 94.4
Msa0117560 MtrunA17_Chr5g0430031 31.024 332 186 8 27 326 29 349 2.96e-45 168
Msa0117560 MtrunA17_Chr2g0310391 29.692 357 202 8 27 343 20 367 1.35e-44 166
Msa0117560 MtrunA17_Chr1g0162811 32.267 344 203 9 4 320 1 341 1.82e-44 165
Msa0117560 MtrunA17_Chr3g0101651 31.751 337 190 10 10 314 11 339 2.83e-44 165
Msa0117560 MtrunA17_Chr3g0101651 24.611 321 159 10 341 588 8 318 5.75e-19 90.5
Msa0117560 MtrunA17_Chr3g0101581 31.332 383 204 12 11 346 5 375 3.55e-44 164
Msa0117560 MtrunA17_Chr3g0101761 29.240 342 213 8 1 317 1 338 4.36e-44 164
Msa0117560 MtrunA17_Chr3g0101761 22.222 324 179 7 337 590 3 323 2.25e-19 91.7
Msa0117560 MtrunA17_Chr1g0167321 31.024 332 193 9 11 314 11 334 4.27e-43 161
Msa0117560 MtrunA17_Chr8g0344181 28.760 379 219 10 7 343 11 380 4.81e-43 162
Msa0117560 MtrunA17_Chr8g0344181 28.231 294 126 10 371 587 39 324 3.71e-22 100
Msa0117560 MtrunA17_Chr5g0445441 31.471 340 196 10 7 320 53 381 5.40e-43 162
Msa0117560 MtrunA17_Chr3g0101631 29.738 343 198 7 7 320 8 336 5.85e-43 161
Msa0117560 MtrunA17_Chr3g0101631 23.175 315 161 7 345 591 11 312 1.04e-17 86.7
Msa0117560 MtrunA17_Chr5g0430081 31.714 350 193 10 11 326 10 347 6.63e-43 161
Msa0117560 MtrunA17_Chr3g0101571 31.447 318 186 8 36 328 37 347 8.26e-43 160
Msa0117560 MtrunA17_Chr1g0162801 29.706 340 210 9 11 325 14 349 2.04e-42 160
Msa0117560 MtrunA17_Chr6g0484841 30.721 319 174 9 35 319 37 342 2.31e-42 159
Msa0117560 MtrunA17_Chr4g0058191 28.000 375 216 10 12 343 1 364 3.05e-42 159
Msa0117560 MtrunA17_Chr6g0463791 31.322 348 188 10 10 325 14 342 5.99e-42 158
Msa0117560 MtrunA17_Chr8g0344191 29.815 379 214 10 7 343 43 411 6.94e-42 159
Msa0117560 MtrunA17_Chr8g0344191 28.213 319 139 11 346 587 50 355 4.57e-20 94.0
Msa0117560 MtrunA17_Chr5g0430101 30.086 349 198 9 11 326 11 346 1.17e-41 157
Msa0117560 MtrunA17_Chr5g0430101 24.390 328 153 12 346 595 16 326 5.34e-15 78.2
Msa0117560 MtrunA17_Chr3g0116741 29.526 359 210 11 11 340 29 373 1.74e-41 157
Msa0117560 MtrunA17_Chr2g0310381 28.267 375 219 9 10 343 2 367 1.95e-41 157
Msa0117560 MtrunA17_Chr8g0382901 29.722 360 206 10 13 343 8 349 5.23e-41 159
Msa0117560 MtrunA17_Chr8g0382901 31.348 319 190 7 24 319 481 793 8.34e-41 159
Msa0117560 MtrunA17_Chr8g0382901 23.256 301 164 7 337 584 1 287 2.93e-19 92.4
Msa0117560 MtrunA17_Chr5g0445461 30.030 333 202 8 11 320 16 340 7.75e-41 155
Msa0117560 MtrunA17_Chr4g0020041 28.024 339 211 8 9 317 4 339 9.13e-41 155
Msa0117560 MtrunA17_Chr4g0047631 28.418 373 223 11 7 345 22 384 1.00e-40 155
Msa0117560 MtrunA17_Chr5g0445421 32.550 298 171 8 36 320 113 393 1.05e-40 155
Msa0117560 MtrunA17_Chr1g0156101 30.275 327 184 8 27 314 24 345 1.28e-40 155
Msa0117560 MtrunA17_Chr1g0207851 35.385 260 130 6 46 270 49 305 1.41e-40 151
Msa0117560 MtrunA17_Chr1g0207851 29.520 271 116 4 381 577 49 318 7.29e-30 121
Msa0117560 MtrunA17_Chr4g0058231 29.191 346 201 10 12 319 1 340 2.27e-40 154
Msa0117560 MtrunA17_Chr3g0101701 28.242 347 204 10 36 345 39 377 2.40e-40 154
Msa0117560 MtrunA17_Chr3g0101721 28.614 332 209 7 11 318 14 341 2.57e-40 154
Msa0117560 MtrunA17_Chr5g0431641 31.290 310 180 8 36 320 39 340 3.19e-40 153
Msa0117560 MtrunA17_Chr3g0101731 26.579 380 237 9 1 345 1 373 3.76e-40 153
Msa0117560 MtrunA17_Chr8g0357421 29.799 349 202 9 1 317 1 338 4.06e-40 153
Msa0117560 MtrunA17_Chr1g0160851 28.333 360 224 9 6 338 4 356 4.13e-40 153
Msa0117560 MtrunA17_Chr4g0061381 30.628 382 203 13 12 343 4 373 4.73e-40 153
Msa0117560 MtrunA17_Chr3g0094171 31.105 344 193 10 8 320 16 346 7.08e-40 152
Msa0117560 MtrunA17_Chr4g0058201 28.616 318 182 8 26 313 23 325 2.36e-39 150
Msa0117560 MtrunA17_Chr8g0357431 30.899 356 203 10 1 322 1 347 2.78e-39 151
Msa0117560 MtrunA17_Chr8g0357431 21.981 323 173 7 344 590 5 324 5.55e-12 68.6
Msa0117560 MtrunA17_Chr4g0047641 28.613 346 205 10 7 319 19 355 2.84e-39 151
Msa0117560 MtrunA17_Chr5g0445451 30.723 332 201 10 11 320 16 340 3.06e-39 150
Msa0117560 MtrunA17_Chr5g0446161 29.070 344 201 8 10 319 6 340 3.12e-39 150
Msa0117560 MtrunA17_Chr4g0058261 29.275 386 201 14 29 375 53 405 3.58e-39 151
Msa0117560 MtrunA17_Chr5g0445381 31.138 334 197 11 10 320 48 371 4.36e-39 150
Msa0117560 MtrunA17_Chr5g0430091 31.402 328 190 8 27 326 29 349 8.34e-39 149
Msa0117560 MtrunA17_Chr5g0445531 28.981 314 181 8 36 320 39 339 1.16e-38 149
Msa0117560 MtrunA17_Chr3g0101671 29.619 341 199 8 8 314 6 339 1.35e-38 149
Msa0117560 MtrunA17_Chr6g0465511 31.065 338 195 10 9 314 4 335 1.38e-38 149
Msa0117560 MtrunA17_Chr5g0430131 28.963 328 197 7 24 323 26 345 2.21e-38 148
Msa0117560 MtrunA17_Chr6g0466331 31.065 338 195 10 9 314 4 335 2.40e-38 148
Msa0117560 MtrunA17_Chr3g0101601 30.028 363 211 12 6 340 7 354 3.34e-38 147
Msa0117560 MtrunA17_Chr1g0156081 29.268 328 188 8 26 314 47 369 5.91e-38 147
Msa0117560 MtrunA17_Chr3g0101611 30.892 314 173 9 36 317 39 340 8.83e-38 146
Msa0117560 MtrunA17_Chr6g0463801 30.247 324 179 9 36 325 38 348 1.51e-37 145
Msa0117560 MtrunA17_Chr3g0101621 29.700 367 207 13 3 340 4 348 1.56e-37 145
Msa0117560 MtrunA17_Chr3g0101831 27.273 352 221 10 1 322 1 347 1.81e-37 145
Msa0117560 MtrunA17_Chr3g0101831 22.430 321 172 8 340 591 6 318 8.44e-17 83.6
Msa0117560 MtrunA17_Chr3g0086661 31.481 324 179 8 51 338 45 361 2.67e-37 145
Msa0117560 MtrunA17_Chr3g0094231 27.778 324 194 7 29 323 30 342 3.12e-37 145
Msa0117560 MtrunA17_Chr8g0361471 28.909 339 199 11 7 314 8 335 3.87e-37 145
Msa0117560 MtrunA17_Chr8g0361471 24.841 314 160 10 347 591 11 317 9.94e-15 77.0
Msa0117560 MtrunA17_Chr4g0035921 28.052 385 215 14 10 345 14 385 4.87e-37 144
Msa0117560 MtrunA17_Chr1g0205361 27.882 373 222 10 10 346 9 370 5.00e-37 144
Msa0117560 MtrunA17_Chr6g0472311 27.966 354 209 8 7 320 9 356 5.36e-37 144
Msa0117560 MtrunA17_Chr3g0101801 26.023 342 224 6 1 317 8 345 5.64e-37 144
Msa0117560 MtrunA17_Chr3g0101801 20.988 324 183 5 337 590 10 330 1.54e-17 85.9
Msa0117560 MtrunA17_Chr3g0101811 26.050 357 220 9 1 317 1 353 5.81e-37 144
Msa0117560 MtrunA17_Chr3g0101811 24.262 305 157 8 337 572 3 302 1.20e-19 92.8
Msa0117560 MtrunA17_Chr4g0058281 28.652 356 224 11 10 340 21 371 7.24e-37 144
Msa0117560 MtrunA17_Chr4g0024771 28.324 346 202 11 35 343 38 374 7.29e-37 144
Msa0117560 MtrunA17_Chr2g0280261 30.723 332 187 10 27 325 24 345 8.86e-37 144
Msa0117560 MtrunA17_Chr3g0086651 30.864 324 181 8 51 338 45 361 8.94e-37 144
Msa0117560 MtrunA17_Chr3g0086691 29.794 339 185 11 51 343 45 376 9.29e-37 144
Msa0117560 MtrunA17_Chr2g0314721 29.086 361 222 8 6 338 13 367 5.66e-36 141
Msa0117560 MtrunA17_Chr8g0372251 27.778 360 210 11 28 346 28 378 6.25e-36 141
Msa0117560 MtrunA17_Chr5g0446151 29.467 319 191 8 26 319 32 341 9.14e-36 140
Msa0117560 MtrunA17_Chr5g0405001 26.316 380 220 11 12 346 22 386 2.04e-35 140
Msa0117560 MtrunA17_Chr5g0431671 27.597 308 195 8 36 320 39 341 2.10e-35 139
Msa0117560 MtrunA17_Chr4g0047691 27.616 344 208 11 7 319 21 354 9.29e-35 138
Msa0117560 MtrunA17_Chr5g0395331 27.273 374 226 10 10 343 11 378 1.01e-34 137
Msa0117560 MtrunA17_Chr6g0458561 31.461 356 181 12 12 320 28 367 1.58e-34 137
Msa0117560 MtrunA17_Chr4g0056951 30.537 298 173 7 58 326 65 357 1.67e-34 137
Msa0117560 MtrunA17_Chr8g0355961 27.671 365 230 9 2 338 7 365 2.27e-34 137
Msa0117560 MtrunA17_Chr7g0265611 27.660 376 216 12 10 345 28 387 2.41e-34 137
Msa0117560 MtrunA17_Chr8g0356001 29.101 378 218 11 10 343 9 380 2.67e-34 136
Msa0117560 MtrunA17_Chr4g0057001 30.000 320 187 7 36 326 51 362 3.54e-34 136
Msa0117560 MtrunA17_Chr5g0395321 27.123 365 224 11 1 338 7 356 3.80e-34 136
Msa0117560 MtrunA17_Chr2g0314731 27.147 361 229 8 6 338 2 356 1.69e-33 134
Msa0117560 MtrunA17_Chr5g0401681 27.027 370 217 11 6 338 4 357 2.82e-33 133
Msa0117560 MtrunA17_Chr1g0205371 25.275 364 236 10 4 338 1 357 8.06e-33 132
Msa0117560 MtrunA17_Chr1g0156061 29.412 289 153 7 35 314 55 301 3.44e-32 130
Msa0117560 MtrunA17_Chr8g0339311 28.955 335 195 8 22 320 34 361 6.02e-32 130
Msa0117560 MtrunA17_Chr5g0401691 28.011 357 206 10 9 330 23 363 6.13e-32 129
Msa0117560 MtrunA17_Chr1g0200961 25.956 366 229 10 4 338 2 356 9.60e-32 129
Msa0117560 MtrunA17_Chr4g0039901 28.035 346 203 11 36 345 36 371 1.03e-31 129
Msa0117560 MtrunA17_Chr7g0246221 28.989 376 221 12 10 343 6 377 2.15e-31 128
Msa0117560 MtrunA17_Chr4g0047661 25.656 343 209 8 12 319 25 356 2.39e-31 128
Msa0117560 MtrunA17_Chr7g0254641 26.453 344 213 7 30 340 32 368 2.58e-31 128
Msa0117560 MtrunA17_Chr4g0011881 27.564 312 197 7 27 314 24 330 4.76e-31 127
Msa0117560 MtrunA17_Chr8g0339331 28.354 328 194 9 29 320 32 354 5.70e-31 127
Msa0117560 MtrunA17_Chr1g0176831 29.973 367 211 11 6 338 32 386 5.74e-31 127
Msa0117560 MtrunA17_Chr4g0053621 26.904 394 219 13 1 343 1 376 1.89e-30 125
Msa0117560 MtrunA17_Chr1g0164211 26.744 344 209 8 36 343 32 368 2.74e-30 124
Msa0117560 MtrunA17_Chr6g0451751 27.684 354 207 9 12 320 14 363 5.05e-30 124
Msa0117560 MtrunA17_Chr7g0246131 27.078 373 224 11 4 338 1 363 5.05e-30 124
Msa0117560 MtrunA17_Chr4g0017411 29.444 360 204 11 20 346 17 359 1.05e-29 122
Msa0117560 MtrunA17_Chr5g0395381 27.513 378 207 16 1 343 1 346 1.66e-29 122
Msa0117560 MtrunA17_Chr4g0052851 28.135 327 192 10 19 319 19 328 2.42e-29 122
Msa0117560 MtrunA17_Chr3g0101741 30.797 276 163 8 72 322 1 273 2.56e-29 120
Msa0117560 MtrunA17_Chr4g0011901 27.869 305 192 8 35 314 29 330 2.68e-29 122
Msa0117560 MtrunA17_Chr6g0451691 27.083 336 196 8 30 320 36 367 1.47e-28 120
Msa0117560 MtrunA17_Chr7g0246151 29.870 308 176 9 58 332 55 355 1.28e-27 117
Msa0117560 MtrunA17_Chr5g0431511 26.506 332 211 8 36 338 34 361 1.49e-27 116
Msa0117560 MtrunA17_Chr7g0255531 25.654 382 228 11 8 346 1 369 1.96e-27 116
Msa0117560 MtrunA17_Chr7g0218611 25.231 325 206 6 26 320 24 341 3.49e-27 115
Msa0117560 MtrunA17_Chr4g0011921 26.744 344 207 9 10 320 5 336 1.22e-26 114
Msa0117560 MtrunA17_Chr8g0383811 57.692 104 33 3 128 220 1 104 3.78e-26 102
Msa0117560 MtrunA17_Chr8g0383811 56.190 105 25 2 423 507 1 104 8.93e-26 102
Msa0117560 MtrunA17_Chr4g0052861 24.355 349 206 11 11 320 9 338 4.78e-26 112
Msa0117560 MtrunA17_Chr4g0052881 25.284 352 202 11 6 320 12 339 5.23e-26 112
Msa0117560 MtrunA17_Chr6g0451741 25.978 358 212 10 6 320 38 385 6.91e-26 112
Msa0117560 MtrunA17_Chr7g0246121 29.358 327 183 10 58 345 55 372 1.02e-25 111
Msa0117560 MtrunA17_Chr4g0011961 25.135 370 236 12 10 345 5 367 1.19e-25 110
Msa0117560 MtrunA17_Chr6g0463611 26.599 297 174 9 10 278 28 308 1.59e-25 107
Msa0117560 MtrunA17_Chr5g0431501 26.629 353 204 12 36 343 34 376 1.93e-25 110
Msa0117560 MtrunA17_Chr5g0431461 26.629 353 204 12 36 343 34 376 1.93e-25 110
Msa0117560 MtrunA17_Chr5g0445751 25.676 296 188 7 10 281 20 307 2.63e-25 107
Msa0117560 MtrunA17_Chr7g0218601 25.538 325 200 9 26 317 24 339 9.57e-25 108
Msa0117560 MtrunA17_Chr7g0246181 29.897 291 173 10 58 320 55 342 1.30e-24 107
Msa0117560 MtrunA17_Chr4g0039391 28.659 328 194 12 25 320 24 343 1.41e-24 107
Msa0117560 MtrunA17_Chr2g0296661 26.625 323 186 7 56 338 51 362 1.54e-24 107
Msa0117560 MtrunA17_Chr2g0296651 26.289 388 215 14 7 346 7 371 2.21e-24 107
Msa0117560 MtrunA17_Chr4g0011981 25.714 350 211 11 36 346 30 369 1.01e-23 105
Msa0117560 MtrunA17_Chr1g0197881 25.806 341 207 11 10 319 9 334 1.59e-23 104
Msa0117560 MtrunA17_Chr1g0197891 24.412 340 214 9 10 319 9 335 1.63e-23 104
Msa0117560 MtrunA17_Chr2g0304871 26.462 325 194 9 34 320 37 354 4.38e-23 103
Msa0117560 MtrunA17_Chr5g0419691 24.765 319 200 8 26 314 22 330 5.29e-23 102
Msa0117560 MtrunA17_Chr1g0197851 24.706 340 213 9 10 319 9 335 6.06e-23 102
Msa0117560 MtrunA17_Chr5g0406651 24.444 315 210 6 27 316 22 333 6.86e-23 102
Msa0117560 MtrunA17_Chr5g0430171 31.088 193 118 3 27 206 29 219 7.35e-23 97.8
Msa0117560 MtrunA17_Chr1g0197871 24.478 335 220 9 10 319 9 335 9.61e-23 102
Msa0117560 MtrunA17_Chr4g0008101 25.369 339 204 12 25 320 31 363 1.41e-22 101
Msa0117560 MtrunA17_Chr4g0011871 24.688 320 200 8 26 314 22 331 1.46e-22 101
Msa0117560 MtrunA17_Chr6g0451681 25.000 328 194 9 7 322 31 318 6.31e-22 99.4
Msa0117560 MtrunA17_Chr6g0466901 26.361 349 209 10 15 320 12 355 1.49e-21 98.6
Msa0117560 MtrunA17_Chr8g0370641 25.691 362 220 10 4 320 1 358 1.69e-21 98.6
Msa0117560 MtrunA17_Chr6g0451641 23.919 347 222 10 11 320 15 356 1.41e-20 95.5
Msa0117560 MtrunA17_Chr8g0370651 25.852 352 220 9 6 320 15 362 1.43e-20 95.5
Msa0117560 MtrunA17_Chr6g0466941 26.168 321 192 9 41 320 40 356 1.83e-20 95.1
Msa0117560 MtrunA17_Chr2g0310371 40.000 130 67 2 27 147 20 147 2.44e-20 87.8
Msa0117560 MtrunA17_Chr4g0046631 25.000 320 206 7 35 323 45 361 3.17e-20 94.4
Msa0117560 MtrunA17_Chr6g0451781 23.988 321 199 8 41 320 80 396 4.42e-20 94.4
Msa0117560 MtrunA17_Chr5g0432751 23.964 338 216 13 14 319 14 342 2.35e-19 91.7
Msa0117560 MtrunA17_Chr5g0445411 34.228 149 83 4 10 148 24 167 2.60e-19 85.9
Msa0117560 MtrunA17_Chr3g0107541 27.820 266 162 7 83 323 108 368 1.18e-18 89.7
Msa0117560 MtrunA17_Chr1g0160861 27.320 194 127 4 154 338 9 197 1.95e-18 87.0
Msa0117560 MtrunA17_Chr1g0200951 24.000 350 197 12 28 332 53 378 2.00e-18 89.0
Msa0117560 MtrunA17_Chr1g0176851 27.660 235 149 6 115 332 2 232 3.20e-18 84.3
Msa0117560 MtrunA17_Chr3g0117321 36.134 119 65 2 37 146 9 125 9.14e-18 79.7
Msa0117560 MtrunA17_Chr1g0198191 23.161 367 240 12 6 338 15 373 1.15e-17 86.3
Msa0117560 MtrunA17_Chr1g0210091 23.460 341 212 10 44 345 74 404 4.06e-17 84.7
Msa0117560 MtrunA17_Chr5g0419451 27.706 231 129 8 113 319 142 358 4.38e-17 84.7
Msa0117560 MtrunA17_Chr4g0011861 26.966 178 110 4 26 186 22 196 1.13e-16 81.3
Msa0117560 MtrunA17_Chr3g0082701 24.074 324 198 11 41 320 45 364 1.88e-16 82.8
Msa0117560 MtrunA17_Chr8g0377341 24.033 362 211 13 6 320 24 368 3.01e-16 82.0
Msa0117560 MtrunA17_Chr6g0484771 30.000 130 82 2 64 184 1 130 3.83e-16 75.9
Msa0117560 MtrunA17_Chr1g0213671 25.141 354 217 14 33 345 32 378 2.87e-15 79.0
Msa0117560 MtrunA17_Chr5g0402971 23.810 273 168 7 25 260 29 298 4.64e-15 76.6
Msa0117560 MtrunA17_Chr4g0011931 23.891 293 182 8 10 270 5 288 1.11e-14 75.1
Msa0117560 MtrunA17_Chr4g0046671 21.678 286 181 8 34 291 41 311 6.64e-14 73.2
Msa0117560 MtrunA17_Chr5g0431591 26.220 164 106 4 166 320 1 158 1.31e-12 69.3
Msa0117560 MtrunA17_Chr2g0280071 24.458 323 204 13 36 326 64 378 1.62e-12 70.5
Msa0117560 MtrunA17_Chr5g0431631 32.432 111 66 1 36 137 51 161 4.86e-12 64.3
Msa0117560 MtrunA17_Chr5g0430051 46.154 78 31 2 27 95 30 105 7.33e-12 62.8
Msa0117560 MtrunA17_Chr5g0430051 51.724 58 26 2 361 418 30 85 2.69e-11 61.2
Msa0117560 MtrunA17_Chr4g0046691 20.543 258 171 7 34 264 38 288 1.18e-11 66.2
Msa0117560 MtrunA17_Chr8g0346261 22.581 310 196 8 37 317 86 380 1.42e-11 67.4
Msa0117560 MtrunA17_Chr1g0174431 70.000 40 12 0 281 320 1 40 2.25e-11 63.9
Msa0117560 MtrunA17_Chr2g0280081 25.256 293 182 12 64 326 561 846 2.45e-11 67.0
Msa0117560 MtrunA17_Chr2g0280121 24.104 307 191 11 52 326 55 351 3.17e-11 66.2
Msa0117560 MtrunA17_Chr8g0381571 28.369 141 86 5 185 318 202 334 4.47e-11 65.5
Msa0117560 MtrunA17_Chr8g0381541 28.369 141 86 5 185 318 202 334 4.90e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0117560 AT5G06900.1 42.775 346 164 10 1 319 1 339 1.36e-79 260
Msa0117560 AT5G06900.1 35.294 306 117 9 344 577 10 306 2.31e-44 166
Msa0117560 AT2G42250.1 35.599 309 169 7 36 319 42 345 4.49e-53 190
Msa0117560 AT2G42250.1 26.974 304 146 6 337 571 9 305 3.38e-25 110
Msa0117560 AT5G06905.1 29.885 348 206 7 4 322 1 339 7.92e-50 181
Msa0117560 AT5G06905.1 26.667 270 124 4 371 571 32 296 7.50e-26 112
Msa0117560 AT4G15360.1 29.945 364 212 10 1 332 5 357 1.59e-48 177
Msa0117560 AT4G13310.2 31.707 328 177 9 22 316 19 332 4.22e-48 173
Msa0117560 AT3G20130.1 32.209 326 176 9 46 338 53 366 1.84e-47 174
Msa0117560 AT3G20130.1 25.926 270 120 5 381 577 53 315 3.28e-20 94.7
Msa0117560 AT4G13310.1 31.707 328 177 9 22 316 19 332 5.81e-47 172
Msa0117560 AT3G20110.1 31.053 380 202 12 11 345 12 376 7.23e-46 170
Msa0117560 AT3G20110.1 26.978 278 123 5 373 577 42 312 1.60e-22 102
Msa0117560 AT3G20090.2 33.981 309 157 8 46 320 54 349 8.38e-46 170
Msa0117560 AT3G20090.2 24.815 270 124 4 381 577 54 317 2.00e-18 89.4
Msa0117560 AT2G30750.1 33.645 321 180 10 22 318 21 332 9.39e-46 169
Msa0117560 AT1G13080.1 30.904 343 193 6 11 319 7 339 1.79e-45 169
Msa0117560 AT1G13080.1 22.549 306 149 10 344 571 4 299 2.84e-12 69.7
Msa0117560 AT4G13290.1 32.416 327 168 10 22 316 20 325 2.69e-45 168
Msa0117560 AT3G20950.1 30.000 360 203 9 10 332 14 361 1.03e-44 167
Msa0117560 AT3G20950.1 24.735 283 131 6 371 577 43 319 1.66e-21 99.0
Msa0117560 AT5G42580.1 33.667 300 171 6 58 338 61 351 1.10e-44 166
Msa0117560 AT5G42580.1 28.629 248 109 4 391 577 60 300 1.92e-20 95.5
Msa0117560 AT1G50520.1 32.298 322 175 10 44 332 52 363 1.69e-44 166
Msa0117560 AT1G50520.1 25.912 274 121 4 379 577 52 318 4.85e-24 106
Msa0117560 AT1G11610.1 33.333 312 176 9 31 318 29 332 3.04e-44 165
Msa0117560 AT1G11610.2 33.333 312 176 9 31 318 29 332 4.38e-44 165
Msa0117560 AT1G50560.1 35.667 300 164 7 46 319 54 350 1.17e-43 164
Msa0117560 AT1G50560.1 26.007 273 119 6 381 577 54 319 5.50e-20 94.0
Msa0117560 AT3G20940.1 29.245 318 186 6 36 323 43 351 1.91e-43 163
Msa0117560 AT3G20940.1 25.000 280 131 4 371 577 43 316 1.80e-25 110
Msa0117560 AT2G27000.1 32.484 314 177 9 46 332 50 355 2.79e-43 162
Msa0117560 AT2G27000.1 23.372 261 124 4 381 571 50 304 1.47e-16 83.6
Msa0117560 AT2G14100.1 32.335 334 185 9 46 345 54 380 3.55e-43 162
Msa0117560 AT2G14100.1 24.815 270 123 4 381 577 54 316 1.08e-16 84.0
Msa0117560 AT2G30770.1 32.895 304 178 8 36 318 34 332 5.10e-43 161
Msa0117560 AT3G26300.1 31.471 340 194 8 10 318 4 335 6.93e-42 158
Msa0117560 AT3G26300.1 24.367 316 153 10 347 586 4 309 4.83e-16 81.6
Msa0117560 AT3G48280.1 30.205 341 204 9 10 325 2 333 8.47e-42 158
Msa0117560 AT4G15330.1 30.435 345 211 8 12 332 14 353 9.93e-42 158
Msa0117560 AT3G32047.1 29.321 324 187 8 46 338 53 365 1.02e-41 158
Msa0117560 AT3G32047.1 24.444 270 123 7 381 577 53 314 7.17e-18 87.4
Msa0117560 AT3G20140.1 32.716 324 182 8 36 332 43 357 1.20e-41 158
Msa0117560 AT3G20140.1 23.929 280 133 4 371 577 43 315 1.49e-17 86.7
Msa0117560 AT4G20240.2 29.971 347 197 11 24 338 22 354 7.55e-41 153
Msa0117560 AT3G20120.4 31.737 334 187 10 46 345 52 378 9.66e-41 155
Msa0117560 AT3G20120.4 23.372 261 123 3 381 571 52 305 4.16e-17 85.1
Msa0117560 AT3G20100.1 30.748 361 200 10 10 333 11 358 1.61e-40 155
Msa0117560 AT3G20100.1 26.616 263 117 4 379 571 50 306 1.96e-21 98.6
Msa0117560 AT4G20240.1 29.799 349 199 11 22 338 20 354 2.31e-40 153
Msa0117560 AT2G05180.1 31.596 307 173 8 46 323 52 350 3.48e-40 152
Msa0117560 AT2G05180.1 22.963 270 129 4 381 577 52 315 5.93e-13 71.6
Msa0117560 AT3G20130.2 30.599 317 165 9 46 338 53 338 4.13e-40 153
Msa0117560 AT3G20130.2 28.099 242 122 6 381 577 53 287 1.63e-18 89.4
Msa0117560 AT4G12320.1 30.749 374 210 14 12 343 20 386 6.03e-40 153
Msa0117560 AT4G12320.1 26.480 321 151 12 349 590 20 334 1.37e-14 77.0
Msa0117560 AT3G48270.1 28.065 310 196 8 27 317 23 324 1.30e-39 152
Msa0117560 AT5G07990.1 27.746 346 204 11 10 320 4 338 6.37e-39 150
Msa0117560 AT5G47990.1 30.284 317 180 8 46 332 53 358 9.12e-39 150
Msa0117560 AT5G47990.1 26.119 268 121 4 381 577 53 314 8.11e-21 96.7
Msa0117560 AT4G15350.1 29.653 317 183 6 46 332 45 351 9.22e-39 150
Msa0117560 AT4G15350.1 23.616 271 127 5 381 577 45 309 1.04e-14 77.4
Msa0117560 AT4G31500.1 29.080 337 211 8 8 319 1 334 1.25e-38 149
Msa0117560 AT5G24950.1 28.097 331 206 9 10 314 4 328 1.38e-38 149
Msa0117560 AT3G48320.1 28.863 343 216 9 4 326 1 335 1.96e-38 148
Msa0117560 AT3G48310.1 28.065 310 196 7 27 317 24 325 2.20e-38 148
Msa0117560 AT1G13110.1 29.915 351 201 10 4 319 1 341 3.43e-38 148
Msa0117560 AT3G26310.1 28.612 353 208 8 1 323 1 339 1.17e-37 146
Msa0117560 AT3G20960.2 31.975 319 176 9 62 345 67 379 1.93e-37 146
Msa0117560 AT4G12300.1 28.457 376 217 12 11 343 18 384 3.04e-37 145
Msa0117560 AT3G26320.1 29.231 325 200 8 25 323 20 340 3.96e-37 145
Msa0117560 AT3G26320.1 23.746 299 139 9 357 577 18 305 1.19e-14 77.4
Msa0117560 AT3G48300.1 29.808 312 185 10 37 325 31 331 5.45e-37 144
Msa0117560 AT3G48300.2 29.808 312 185 10 37 325 33 333 5.61e-37 144
Msa0117560 AT3G48290.1 27.362 307 196 7 27 314 25 323 1.05e-36 143
Msa0117560 AT3G20080.2 33.025 324 182 7 36 332 43 358 1.44e-36 144
Msa0117560 AT3G20080.2 26.165 279 130 4 362 570 34 306 2.89e-18 89.0
Msa0117560 AT3G20080.1 33.025 324 182 7 36 332 43 358 1.44e-36 144
Msa0117560 AT3G20080.1 26.165 279 130 4 362 570 34 306 2.89e-18 89.0
Msa0117560 AT5G57260.1 30.380 316 184 8 36 322 31 339 5.41e-36 142
Msa0117560 AT5G57260.1 22.508 311 155 8 344 577 4 305 8.40e-13 71.6
Msa0117560 AT4G12330.1 29.607 331 178 9 58 343 67 387 1.13e-35 141
Msa0117560 AT3G26290.1 30.841 321 185 8 27 318 23 335 1.68e-35 140
Msa0117560 AT3G26290.2 30.841 321 185 8 27 318 36 348 1.91e-35 140
Msa0117560 AT3G26280.1 30.211 331 186 10 24 319 20 340 2.27e-35 140
Msa0117560 AT2G02580.1 29.129 333 205 8 8 314 4 331 3.16e-35 139
Msa0117560 AT2G02580.1 22.756 312 151 10 347 579 4 304 1.32e-13 73.9
Msa0117560 AT3G26280.2 30.211 331 186 10 24 319 37 357 3.20e-35 140
Msa0117560 AT4G15330.2 29.464 336 198 8 12 332 14 325 3.76e-35 139
Msa0117560 AT4G15330.2 25.651 269 151 5 344 570 12 273 1.33e-15 80.1
Msa0117560 AT3G26190.1 30.383 339 191 12 36 340 29 356 9.00e-35 138
Msa0117560 AT5G44620.1 29.178 353 209 10 13 332 23 367 2.11e-34 137
Msa0117560 AT5G44620.1 25.743 202 111 5 402 577 134 322 1.76e-12 70.5
Msa0117560 AT3G26330.1 28.435 313 195 7 36 323 32 340 3.12e-34 136
Msa0117560 AT3G26330.1 24.221 289 134 9 365 577 26 305 1.27e-13 73.9
Msa0117560 AT3G44250.1 28.387 310 193 6 36 319 29 335 9.19e-34 135
Msa0117560 AT5G24960.2 27.385 325 203 8 22 321 20 336 1.20e-33 133
Msa0117560 AT3G26200.1 30.088 339 192 12 36 340 29 356 1.76e-33 134
Msa0117560 AT1G13090.2 29.538 325 184 9 29 319 22 335 3.87e-33 133
Msa0117560 AT5G24960.1 27.385 325 203 8 22 321 20 336 6.33e-33 132
Msa0117560 AT3G20960.1 33.700 273 148 9 100 345 10 276 9.67e-33 130
Msa0117560 AT3G53280.1 30.000 320 174 12 36 319 29 334 1.09e-32 132
Msa0117560 AT3G26230.1 29.275 345 200 9 8 319 3 336 1.51e-32 132
Msa0117560 AT3G26270.1 29.141 326 186 10 28 319 26 340 1.97e-32 131
Msa0117560 AT2G25160.2 29.261 352 206 11 8 320 4 351 4.36e-32 129
Msa0117560 AT5G42590.1 26.254 339 218 8 3 317 2 332 6.16e-32 130
Msa0117560 AT3G26220.1 29.060 351 205 10 1 319 1 339 6.38e-32 130
Msa0117560 AT3G26210.1 27.815 302 191 6 44 320 40 339 7.21e-32 130
Msa0117560 AT2G25160.1 29.261 352 206 11 8 320 4 351 1.09e-31 129
Msa0117560 AT3G48290.2 25.225 333 196 8 27 314 25 349 1.69e-31 129
Msa0117560 AT2G45560.1 29.226 349 200 13 36 345 39 379 2.02e-31 128
Msa0117560 AT3G26170.1 26.590 346 211 9 8 319 3 339 2.50e-31 128
Msa0117560 AT4G37430.1 28.011 357 196 10 4 320 1 336 3.09e-31 128
Msa0117560 AT5G25140.1 28.863 343 202 11 4 318 3 331 3.67e-31 127
Msa0117560 AT1G33720.1 28.889 360 211 12 10 332 9 360 3.92e-31 127
Msa0117560 AT4G12310.1 27.660 329 190 9 58 343 65 388 7.65e-31 127
Msa0117560 AT5G25120.1 28.947 342 200 13 6 318 4 331 1.05e-30 126
Msa0117560 AT4G13770.1 25.145 346 217 8 13 329 8 340 1.89e-30 125
Msa0117560 AT2G45570.1 28.363 342 197 9 44 343 47 382 2.16e-30 125
Msa0117560 AT3G26180.1 27.988 343 201 10 14 319 6 339 4.29e-30 124
Msa0117560 AT2G24180.1 27.215 316 188 7 36 319 37 342 4.54e-30 124
Msa0117560 AT4G22710.1 26.524 328 191 8 58 343 75 394 6.37e-30 124
Msa0117560 AT2G45550.1 27.559 381 228 11 5 343 7 381 8.99e-30 124
Msa0117560 AT4G22690.1 26.524 328 191 8 58 343 106 425 1.19e-29 124
Msa0117560 AT4G37330.1 27.326 344 196 11 13 319 6 332 1.20e-29 123
Msa0117560 AT3G53300.1 28.025 314 190 8 36 319 29 336 1.37e-29 123
Msa0117560 AT4G15380.1 28.947 304 167 9 62 333 68 354 1.58e-29 123
Msa0117560 AT4G37400.1 27.222 360 204 11 4 327 1 338 6.41e-29 121
Msa0117560 AT4G37410.1 26.455 378 218 11 10 343 6 367 1.50e-28 120
Msa0117560 AT5G67310.1 26.211 351 207 12 1 317 12 344 1.81e-28 119
Msa0117560 AT5G04330.1 26.032 315 197 9 36 319 33 342 2.32e-28 119
Msa0117560 AT5G57220.1 26.053 380 221 14 7 345 3 363 2.82e-28 119
Msa0117560 AT1G28430.1 27.577 359 217 12 12 338 17 364 4.23e-28 119
Msa0117560 AT4G37340.1 27.841 352 201 12 3 319 2 335 4.60e-28 118
Msa0117560 AT3G26160.1 23.699 346 221 8 8 319 3 339 1.15e-27 117
Msa0117560 AT4G37320.1 26.761 355 203 12 10 326 7 342 1.56e-27 117
Msa0117560 AT3G26150.1 24.277 346 219 8 8 319 3 339 2.99e-27 116
Msa0117560 AT5G10600.1 27.666 347 202 11 3 316 17 347 3.23e-27 116
Msa0117560 AT1G74550.1 25.602 332 211 7 11 319 3 321 5.62e-27 115
Msa0117560 AT4G37370.1 26.776 366 213 12 3 332 2 348 5.76e-27 115
Msa0117560 AT2G27010.1 27.327 333 188 11 46 346 46 356 1.67e-26 114
Msa0117560 AT5G25130.1 27.859 341 205 11 6 318 4 331 1.92e-26 113
Msa0117560 AT3G61040.2 28.526 312 184 9 36 319 34 334 2.69e-26 111
Msa0117560 AT2G45580.3 29.195 298 169 9 58 320 59 349 3.05e-26 111
Msa0117560 AT2G45580.1 29.195 298 169 9 58 320 59 349 9.70e-26 111
Msa0117560 AT3G61040.1 28.526 312 184 9 36 319 34 334 1.27e-25 111
Msa0117560 AT1G01280.1 28.053 303 172 8 58 323 53 346 2.46e-25 110
Msa0117560 AT4G39950.1 26.027 365 206 12 1 320 27 372 2.75e-25 110
Msa0117560 AT4G39950.2 26.027 365 206 12 1 320 67 412 3.43e-25 110
Msa0117560 AT4G36220.1 25.203 369 221 12 43 365 48 407 4.50e-25 109
Msa0117560 AT3G20090.1 31.081 222 118 5 123 320 1 211 5.33e-25 107
Msa0117560 AT3G20090.1 27.568 185 103 3 418 577 1 179 1.31e-14 76.6
Msa0117560 AT5G25180.1 26.498 317 199 9 28 318 23 331 6.97e-25 108
Msa0117560 AT5G10610.1 28.247 308 185 10 36 316 33 331 1.04e-24 108
Msa0117560 AT4G31970.1 26.506 332 188 11 37 320 33 356 1.87e-24 107
Msa0117560 AT2G40890.1 24.047 341 218 9 11 319 3 334 3.76e-24 107
Msa0117560 AT5G36220.1 25.773 388 219 13 8 343 6 376 4.82e-24 106
Msa0117560 AT3G20120.2 27.863 262 130 8 123 345 1 242 6.13e-24 104
Msa0117560 AT3G20120.2 25.568 176 102 2 418 571 1 169 2.83e-13 72.4
Msa0117560 AT3G20120.3 27.863 262 130 8 123 345 1 242 6.13e-24 104
Msa0117560 AT3G20120.3 25.568 176 102 2 418 571 1 169 2.83e-13 72.4
Msa0117560 AT3G20120.1 27.863 262 130 8 123 345 1 242 6.13e-24 104
Msa0117560 AT3G20120.1 25.568 176 102 2 418 571 1 169 2.83e-13 72.4
Msa0117560 AT4G37360.1 26.744 344 199 11 11 319 10 335 8.59e-24 105
Msa0117560 AT2G22330.1 26.260 377 197 14 4 320 19 374 9.54e-24 105
Msa0117560 AT2G22330.2 26.260 377 197 14 4 320 42 397 1.24e-23 105
Msa0117560 AT4G31940.1 26.426 333 188 13 37 320 33 357 1.29e-23 105
Msa0117560 AT1G13100.1 26.490 302 189 6 46 319 39 335 3.03e-23 103
Msa0117560 AT3G25180.2 27.673 318 192 10 35 320 38 349 3.81e-23 102
Msa0117560 AT3G25180.1 27.673 318 192 10 35 320 38 349 5.11e-23 103
Msa0117560 AT2G23190.1 26.389 360 212 13 11 332 49 393 4.07e-22 100
Msa0117560 AT1G74540.1 25.455 330 204 9 19 319 11 327 2.59e-21 98.2
Msa0117560 AT4G37310.1 25.145 346 210 10 8 316 4 337 1.72e-20 95.5
Msa0117560 AT3G20080.4 28.571 231 134 7 123 332 1 221 9.98e-20 92.0
Msa0117560 AT3G20080.4 27.429 175 99 3 418 570 1 169 1.10e-12 70.5
Msa0117560 AT3G20080.5 28.571 231 134 7 123 332 1 221 9.98e-20 92.0
Msa0117560 AT3G20080.5 27.429 175 99 3 418 570 1 169 1.10e-12 70.5
Msa0117560 AT3G20080.6 28.571 231 134 7 123 332 1 221 9.98e-20 92.0
Msa0117560 AT3G20080.6 27.429 175 99 3 418 570 1 169 1.10e-12 70.5
Msa0117560 AT3G20080.3 28.571 231 134 7 123 332 1 221 9.98e-20 92.0
Msa0117560 AT3G20080.3 27.429 175 99 3 418 570 1 169 1.10e-12 70.5
Msa0117560 AT5G09970.1 23.410 346 215 12 10 319 41 372 1.40e-19 92.8
Msa0117560 AT3G26830.1 24.058 345 219 9 8 319 1 335 2.18e-19 92.0
Msa0117560 AT4G20235.1 27.309 249 139 6 8 233 4 233 3.79e-19 89.7
Msa0117560 AT2G23220.1 25.389 386 226 14 4 343 16 385 4.95e-19 91.3
Msa0117560 AT3G52970.1 24.538 379 238 13 8 345 11 382 1.11e-18 90.1
Msa0117560 AT1G79370.1 23.670 376 225 11 4 320 1 373 2.10e-18 89.4
Msa0117560 AT1G13090.1 26.022 269 155 8 29 264 22 279 2.72e-18 86.3
Msa0117560 AT1G74110.1 23.263 331 207 9 26 319 54 374 2.74e-17 85.9
Msa0117560 AT1G13080.2 28.333 180 104 3 157 319 50 221 3.50e-17 84.3
Msa0117560 AT3G28740.1 25.912 274 166 8 83 332 97 357 3.77e-17 85.1
Msa0117560 AT1G33720.4 27.706 231 142 6 123 332 2 228 3.88e-17 84.0
Msa0117560 AT1G33720.3 27.706 231 142 6 123 332 2 228 3.88e-17 84.0
Msa0117560 AT1G33720.5 27.706 231 142 6 123 332 2 228 3.88e-17 84.0
Msa0117560 AT3G52970.2 23.664 393 238 13 8 345 11 396 4.97e-17 85.1
Msa0117560 AT5G35715.1 26.609 233 144 6 109 319 47 274 1.23e-16 83.2
Msa0117560 AT1G66540.1 25.108 231 136 5 114 319 4 222 2.13e-16 82.0
Msa0117560 AT1G33730.1 28.814 236 139 7 126 338 1 230 2.40e-16 81.6
Msa0117560 AT1G33730.2 28.814 236 139 7 126 338 1 230 2.40e-16 81.6
Msa0117560 AT4G31950.1 23.867 331 190 12 35 320 32 345 5.12e-16 81.6
Msa0117560 AT2G30490.1 25.507 345 207 13 12 319 10 341 8.26e-15 77.8
Msa0117560 AT1G33720.2 25.969 258 149 7 123 338 2 259 2.21e-14 75.9
Msa0117560 AT2G46660.1 23.563 348 206 14 37 345 72 398 7.94e-14 74.7
Msa0117560 AT2G45580.2 29.612 206 119 8 152 338 16 214 2.78e-13 72.0
Msa0117560 AT2G45560.3 27.933 179 107 5 36 196 39 213 3.36e-13 70.1
Msa0117560 AT2G45560.2 25.283 265 162 10 36 268 39 299 3.79e-13 71.2
Msa0117560 AT1G64940.1 22.283 368 242 13 4 332 1 363 4.30e-13 72.4
Msa0117560 AT3G10560.1 23.164 354 215 13 12 326 23 358 8.80e-13 71.6
Msa0117560 AT1G13710.1 24.082 245 151 6 113 333 133 366 2.77e-11 66.6
Msa0117560 AT1G66540.2 26.286 175 103 4 159 319 1 163 3.15e-11 65.5
Msa0117560 AT3G61880.1 21.250 320 195 10 37 320 68 366 5.60e-11 65.9
Msa0117560 AT3G61880.2 21.250 320 195 10 37 320 68 366 9.85e-11 65.1

Find 148 sgRNAs with CRISPR-Local

Find 726 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTGCTTTACCTATATT+TGG 0.153004 1_3:+38648650 Msa0117560:CDS
CTGCATCCCTTTAAGCCTTT+TGG 0.208146 1_3:-38649251 None:intergenic
GCCAATGAAAAGTTGCATTA+TGG 0.227979 1_3:-38657727 None:intergenic
GTTCTTCTTTCTAGTTAGTA+TGG 0.235991 1_3:-38657586 None:intergenic
AAAATTTCCAAAAGGCTTAA+AGG 0.250839 1_3:+38649244 Msa0117560:CDS
CACAAGCTTTCAATTCAATA+TGG 0.258144 1_3:+38648719 Msa0117560:CDS
GAAGAGATTGATTCAGTAAT+AGG 0.262947 1_3:+38649977 Msa0117560:CDS
GGGTTTAACAAAAGGCTTAA+AGG 0.267730 1_3:+38658227 Msa0117560:CDS
GCCTAGAAAGAGTTTCATTA+TGG 0.270686 1_3:-38648744 None:intergenic
GATTTCATGTTTGCACCTTA+TGG 0.294399 1_3:+38648890 Msa0117560:CDS
CAAAAGGCTTAAAGGGGTTA+TGG 0.297205 1_3:+38658235 Msa0117560:CDS
ACAATGAAGGTTCTCATGTT+AGG 0.313253 1_3:+38649344 Msa0117560:CDS
CATAAGCTTTCAATTCGTTA+TGG 0.328966 1_3:+38657702 Msa0117560:CDS
TTTGCTTCCTTTCCTCTTGA+CGG 0.343849 1_3:-38649312 None:intergenic
GGTTTAACAAAAGGCTTAAA+GGG 0.343923 1_3:+38658228 Msa0117560:CDS
AAGCTATGAAAACGAGGAAT+AGG 0.344051 1_3:-38650466 None:intergenic
AAATTTCCAAAAGGCTTAAA+GGG 0.350873 1_3:+38649245 Msa0117560:CDS
CCCATAATGAAACTCTTTCT+AGG 0.354030 1_3:+38648743 Msa0117560:CDS
TTGCACCTTATGGTGAATAT+TGG 0.363514 1_3:+38648900 Msa0117560:CDS
AGGAAGAAAAGGAAAGAAAA+TGG 0.365889 1_3:+38658308 Msa0117560:CDS
AAAGCTTATGAAAACTTTGA+TGG 0.366953 1_3:-38657689 None:intergenic
CCAATGAAAAGTTGCATTAT+GGG 0.368645 1_3:-38657726 None:intergenic
GGAGAGGTTTGACACATTGA+TGG 0.368869 1_3:+38658256 Msa0117560:CDS
TGTTCTTCTTTCTAGTAAGT+AGG 0.377410 1_3:-38648604 None:intergenic
CATCCTTGTTATGATTCTAT+TGG 0.380648 1_3:-38649086 None:intergenic
GAGAACAAGAACACTGAGAT+TGG 0.391821 1_3:+38649397 Msa0117560:CDS
GGGGAGGTAACTTAGCTATA+AGG 0.392369 1_3:-38657668 None:intergenic
GAATGGAAGGTTGGTGGTAA+TGG 0.395412 1_3:+38659090 Msa0117560:intron
CAACAGAATCATCACAAGTA+TGG 0.405369 1_3:+38658070 Msa0117560:CDS
ATATGCATGTCAGAGCTTCT+TGG 0.406132 1_3:+38648938 Msa0117560:CDS
CATTGATGGAGAGGGTGATA+AGG 0.408457 1_3:+38658270 Msa0117560:CDS
AAACAATTAAAACGAGGAAT+GGG 0.408823 1_3:-38659177 None:intergenic
GTTCTTCTTTCTAGTAAGTA+GGG 0.412758 1_3:-38648603 None:intergenic
AGGTGAAAATGTCCAAATAT+AGG 0.415231 1_3:-38648662 None:intergenic
CAATGATGGAGATGGCGATA+AGG 0.415874 1_3:+38649287 Msa0117560:CDS
AATGATGGAGATGGCGATAA+GGG 0.418644 1_3:+38649288 Msa0117560:CDS
ATATGCATGTCTGAGCTTCT+TGG 0.423684 1_3:+38657921 Msa0117560:CDS
CCTCCTGCTCTGCCTATCAT+AGG 0.427750 1_3:+38657636 Msa0117560:CDS
GCAATTGACTACTTATCATA+TGG 0.429437 1_3:+38648860 Msa0117560:CDS
GATTCGAGAAGAAAATTTCA+TGG 0.438704 1_3:-38648823 None:intergenic
ATAGCGATGTGGAAGACATT+AGG 0.440564 1_3:+38658120 Msa0117560:CDS
TGAGACTTCTGCAGCAGAAA+GGG 0.440688 1_3:+38649017 Msa0117560:intron
CAATGAAGGTTCTCATGTTA+GGG 0.442748 1_3:+38649345 Msa0117560:CDS
CCTAGAAAGAGTTTCATTAT+GGG 0.443160 1_3:-38648743 None:intergenic
ATTGATGGAGAGGGTGATAA+GGG 0.451536 1_3:+38658271 Msa0117560:CDS
CGCGAGGCTGTTAATGTTGG+CGG 0.455654 1_3:+38658029 Msa0117560:CDS
GGCTTAAAGGGATGCAGAAA+AGG 0.459684 1_3:+38649257 Msa0117560:CDS
AGGTGAAAATGTCCTATGAT+AGG 0.463833 1_3:-38657648 None:intergenic
ATCAAGAGGAAAGGAAGAAA+AGG 0.466763 1_3:+38658297 Msa0117560:CDS
AGCTATGAAAACGAGGAATA+GGG 0.468011 1_3:-38650465 None:intergenic
AAAACAATTAAAACGAGGAA+TGG 0.473986 1_3:-38659178 None:intergenic
AGAGGAAAGGAAGCAAATAA+AGG 0.475719 1_3:+38649318 Msa0117560:CDS
TGAGACTTCTGCAGACGAAA+GGG 0.477304 1_3:+38658000 Msa0117560:CDS
ATAGGCAGAGCAGGAGGTGT+GGG 0.478647 1_3:-38657630 None:intergenic
ATAGGTAAAGCAAGAGGGCT+TGG 0.479401 1_3:-38648644 None:intergenic
CTTGCTTTCGCCATCACATG+TGG 0.479970 1_3:-38649953 None:intergenic
AACTTCCAATATTCACCATA+AGG 0.480467 1_3:-38648905 None:intergenic
ATATGCAGGGGTTTAACAAA+AGG 0.483428 1_3:+38658219 Msa0117560:CDS
AAGCTTATGAAAACTTTGAT+GGG 0.485155 1_3:-38657688 None:intergenic
TCCATAATCTACTCACCAAA+AGG 0.490178 1_3:-38659201 None:intergenic
CTGCAGCAGAAAGGGGAAGC+CGG 0.490537 1_3:+38649025 Msa0117560:intron
ACGGTTTCTTGTTGCCTCAA+CGG 0.490542 1_3:-38648986 None:intergenic
TTGAAAGCTTGTGAAAACTT+TGG 0.490881 1_3:-38648709 None:intergenic
GAATGTCAAAGCTTTCATCT+TGG 0.491265 1_3:+38658415 Msa0117560:CDS
AGGCAGAGCAGGAGGTGTGG+GGG 0.491792 1_3:-38657628 None:intergenic
CCAAATATAGGTAAAGCAAG+AGG 0.500269 1_3:-38648650 None:intergenic
ATAGTAATGTTGAAGACCTT+AGG 0.503275 1_3:+38649137 Msa0117560:CDS
CTGGTAGTAACTTAGACATA+AGG 0.504114 1_3:-38648682 None:intergenic
TTGTGAAAACTTTGGTGAGC+TGG 0.505952 1_3:-38648701 None:intergenic
AACCTTCCACAACCCTTCCA+AGG 0.506485 1_3:+38650422 Msa0117560:CDS
ATCTTCGACAACAATCGAAT+GGG 0.509231 1_3:+38649907 Msa0117560:CDS
ATGAGCCCTTGGAAGGGTTG+TGG 0.510995 1_3:-38650428 None:intergenic
CTGAGACTTCTGCAGCAGAA+AGG 0.512564 1_3:+38649016 Msa0117560:intron
GAAAAGGATGGAAACAATGA+TGG 0.512806 1_3:+38649273 Msa0117560:CDS
CAAATCAAAGGATGAGCCCT+TGG 0.518272 1_3:-38659150 None:intergenic
ACTGACATCAACAGCTTCGC+CGG 0.518467 1_3:-38649044 None:intergenic
CTGAGACTTCTGCAGACGAA+AGG 0.518715 1_3:+38657999 Msa0117560:CDS
AGAACAAGAACACTGAGATT+GGG 0.519258 1_3:+38649398 Msa0117560:CDS
AATCTTGAACCATGTTCCTA+AGG 0.521098 1_3:-38649153 None:intergenic
ATAGGTATAAAATTTCCAAA+AGG 0.523613 1_3:+38649236 Msa0117560:intron
CTACTTATCATATGGCTCAC+AGG 0.523842 1_3:+38648868 Msa0117560:CDS
AAGCAGCTACGAGCCTTCCA+AGG 0.524650 1_3:+38659133 Msa0117560:CDS
TGCATGTCTGAGCTTCTTGG+TGG 0.526007 1_3:+38657924 Msa0117560:CDS
ATTCGAGAAGAAAATTTCAT+GGG 0.526639 1_3:-38648822 None:intergenic
CACATGTGATGGCGAAAGCA+AGG 0.531284 1_3:+38649954 Msa0117560:CDS
TTTCTTGTTGCCTCAACGGA+CGG 0.531785 1_3:-38648982 None:intergenic
CATATCAAAGGATGAGCCCT+TGG 0.538302 1_3:-38650439 None:intergenic
CAAATAAAGGAAAACAATGA+AGG 0.540989 1_3:+38649331 Msa0117560:CDS
GGCTTAAAGGGGTTATGGAG+AGG 0.541710 1_3:+38658240 Msa0117560:CDS
GCCCGCGAGGCTGTTAATGT+TGG 0.543993 1_3:+38658026 Msa0117560:CDS
GGCAGAGCAGGAGGTGTGGG+GGG 0.544997 1_3:-38657627 None:intergenic
GCCAACATTAACAGCCTCGC+GGG 0.546281 1_3:-38658027 None:intergenic
TTTAAGAATTGGGATATGCA+GGG 0.547711 1_3:+38658206 Msa0117560:intron
TCAAAGGATGAGCCCTTGGA+AGG 0.548369 1_3:-38650435 None:intergenic
GGTAAAGCAAGAGGGCTTGG+TGG 0.551383 1_3:-38648641 None:intergenic
TGTCCTATGATAGGCAGAGC+AGG 0.552113 1_3:-38657639 None:intergenic
AAGTAGGGTTTGAATTGCAA+TGG 0.552531 1_3:-38648588 None:intergenic
TTATGAAAACTTTGATGGGG+AGG 0.556849 1_3:-38657684 None:intergenic
TGCATGTCAGAGCTTCTTGG+TGG 0.557465 1_3:+38648941 Msa0117560:CDS
TGTGGAAGACATTAGGAAGA+TGG 0.558319 1_3:+38658127 Msa0117560:CDS
CATACTTGTGATGATTCTGT+TGG 0.559607 1_3:-38658069 None:intergenic
GATAGGCAGAGCAGGAGGTG+TGG 0.559697 1_3:-38657631 None:intergenic
TAGGGTTTGAATTGCAATGG+TGG 0.563439 1_3:-38648585 None:intergenic
TTGCTTTCGCCATCACATGT+GGG 0.569190 1_3:-38649952 None:intergenic
AATAAACAACCCACATGTGA+TGG 0.573992 1_3:+38649943 Msa0117560:CDS
GCCCTTGGAAGGGTTGTGGA+AGG 0.574184 1_3:-38650424 None:intergenic
TCAAAGGATGAGCCCTTGGA+AGG 0.574648 1_3:-38659146 None:intergenic
GTTTAACAAAAGGCTTAAAG+GGG 0.577283 1_3:+38658229 Msa0117560:CDS
TAGGCAGAGCAGGAGGTGTG+GGG 0.578531 1_3:-38657629 None:intergenic
TCGACAAGTTTCTTCCCTTG+AGG 0.579889 1_3:+38657955 Msa0117560:CDS
CATCTTCGACAACAATCGAA+TGG 0.586211 1_3:+38649906 Msa0117560:CDS
GAGACTTCTGCAGACGAAAG+GGG 0.586464 1_3:+38658001 Msa0117560:CDS
GGACTAGAAATTACTATACA+AGG 0.588552 1_3:-38648773 None:intergenic
GTTTGACACATTGATGGAGA+GGG 0.592554 1_3:+38658262 Msa0117560:CDS
GAGACTTCTGCAGCAGAAAG+GGG 0.594868 1_3:+38649018 Msa0117560:intron
GGCGATAAGGGACCGTCAAG+AGG 0.596614 1_3:+38649300 Msa0117560:CDS
GATGGAAACAATGATGGAGA+TGG 0.597783 1_3:+38649279 Msa0117560:CDS
ACCTTCCACAACCCTTCCAA+GGG 0.599075 1_3:+38650423 Msa0117560:CDS
CAAATATAGGTAAAGCAAGA+GGG 0.599076 1_3:-38648649 None:intergenic
TAAGGGACCGTCAAGAGGAA+AGG 0.602345 1_3:+38649305 Msa0117560:CDS
GGCGAAGCTGTTGATGTCAG+TGG 0.603765 1_3:+38649046 Msa0117560:CDS
TAAAGGGATGCAGAAAAGGA+TGG 0.605537 1_3:+38649261 Msa0117560:CDS
AAAAGGAAAGAAAATGGTGA+AGG 0.607768 1_3:+38658314 Msa0117560:CDS
TGTTGAAGACCTTAGGAACA+TGG 0.612637 1_3:+38649144 Msa0117560:CDS
GGTTTGACACATTGATGGAG+AGG 0.613157 1_3:+38658261 Msa0117560:CDS
TAGTATGGCTCGAATTGCAA+TGG 0.617533 1_3:-38657571 None:intergenic
AGCTTATGAAAACTTTGATG+GGG 0.622082 1_3:-38657687 None:intergenic
TTGATCAATTCCGTCCGTTG+AGG 0.623098 1_3:+38648972 Msa0117560:CDS
TTAAGAATTGGGATATGCAG+GGG 0.623218 1_3:+38658207 Msa0117560:intron
AGCAGCTACGAGCCTTCCAA+GGG 0.623922 1_3:+38659134 Msa0117560:CDS
TAAGGGATCATCAAGAGGAA+AGG 0.624264 1_3:+38658288 Msa0117560:CDS
AACAATTAAAACGAGGAATG+GGG 0.625929 1_3:-38659176 None:intergenic
ACATGTGATGGCGAAAGCAA+GGG 0.627205 1_3:+38649955 Msa0117560:CDS
CAAGGGAAGAAACTTGTCGA+GGG 0.628096 1_3:-38657952 None:intergenic
GGTGATAAGGGATCATCAAG+AGG 0.638341 1_3:+38658283 Msa0117560:CDS
CGCCAACATTAACAGCCTCG+CGG 0.639276 1_3:-38658028 None:intergenic
GACGAAAGGGGAAGCCCGCG+AGG 0.641190 1_3:+38658013 Msa0117560:CDS
CAAAGGATGAGCCCTTGGAA+GGG 0.641683 1_3:-38650434 None:intergenic
GGAATGGGGACACAAATCAA+AGG 0.649911 1_3:-38659162 None:intergenic
GGAATAGGGACACATATCAA+AGG 0.652502 1_3:-38650451 None:intergenic
TCAAGGGAAGAAACTTGTCG+AGG 0.659999 1_3:-38657953 None:intergenic
GGACTGGAAATTACTACACA+AGG 0.667467 1_3:-38657756 None:intergenic
TGGTAATGGAACAGTTAACA+TGG 0.669803 1_3:+38659104 Msa0117560:CDS
TGGTGATGGAACAGTTAACA+TGG 0.681789 1_3:+38650393 Msa0117560:intron
CCTATGATAGGCAGAGCAGG+AGG 0.692061 1_3:-38657636 None:intergenic
TCACCAATAGAATCATAACA+AGG 0.706441 1_3:+38649083 Msa0117560:CDS
TGCTGAAAATGATAGCGATG+TGG 0.713903 1_3:+38658109 Msa0117560:CDS
AAAGGAAAACAATTAAAACG+AGG 0.767982 1_3:-38659183 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATAAAAAAATATTT+TGG + chr1_3:38652620-38652639 Msa0117560:intron 0.0%
!! TCTTATATTTAAAAACTAAA+CGG - chr1_3:38649594-38649613 None:intergenic 10.0%
!!! TCTAAAATTATAAATCATTT+AGG - chr1_3:38649846-38649865 None:intergenic 10.0%
!! AATACTTAAATATAAATTCA+AGG - chr1_3:38655370-38655389 None:intergenic 10.0%
!! AACTAAAAAATATGTAAAAA+AGG + chr1_3:38657291-38657310 Msa0117560:intron 10.0%
!!! TATACAACTTTTTTTAGTTT+TGG + chr1_3:38648556-38648575 Msa0117560:CDS 15.0%
!! TTAGTATGTTAGAATATATT+TGG + chr1_3:38649197-38649216 Msa0117560:intron 15.0%
!!! ATGAACTTTTAAAAACTAAT+TGG - chr1_3:38649561-38649580 None:intergenic 15.0%
!!! AATAACAAAAGTATTAGTTT+AGG - chr1_3:38649642-38649661 None:intergenic 15.0%
!!! CTATTTTATTTGTTAATTTG+TGG + chr1_3:38650155-38650174 Msa0117560:intron 15.0%
!! ATAGACTATCAATTATTAAA+TGG + chr1_3:38650501-38650520 Msa0117560:intron 15.0%
!! AAAAAATAATTGTTCTCTTT+AGG + chr1_3:38650566-38650585 Msa0117560:intron 15.0%
!! AAAAATAATTGTTCTCTTTA+GGG + chr1_3:38650567-38650586 Msa0117560:intron 15.0%
!!! ATTTTTAAAGACTAAGTTAT+TGG - chr1_3:38651223-38651242 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr1_3:38651543-38651562 Msa0117560:intron 15.0%
!!! TTTATTCTGTTTTTTTAAGT+TGG + chr1_3:38654718-38654737 Msa0117560:intron 15.0%
!! AAATATAAATGCATAGTATT+TGG - chr1_3:38654916-38654935 None:intergenic 15.0%
!! TATTTATTAGTTATAAGAAC+AGG + chr1_3:38656233-38656252 Msa0117560:intron 15.0%
!!! GTTTTATAAATTACGTAATT+TGG - chr1_3:38656431-38656450 None:intergenic 15.0%
!! AAAAAAATTGTACTTGTAAA+AGG - chr1_3:38656744-38656763 None:intergenic 15.0%
!!! ATATTTTAAAAGTCTCATAT+TGG - chr1_3:38657249-38657268 None:intergenic 15.0%
!!! ATGAGACTTTTAAAATATAT+AGG + chr1_3:38657251-38657270 Msa0117560:intron 15.0%
!!! TGAGACTTTTAAAATATATA+GGG + chr1_3:38657252-38657271 Msa0117560:intron 15.0%
!!! AATCATAATAAGTTTTGTTT+TGG - chr1_3:38657390-38657409 None:intergenic 15.0%
!!! TTATTTGGTTTTTTAAGAAT+TGG + chr1_3:38658195-38658214 Msa0117560:intron 15.0%
!!! TATTTGGTTTTTTAAGAATT+GGG + chr1_3:38658196-38658215 Msa0117560:intron 15.0%
!!! CTATTTTATTTAGTAATTTG+TGG + chr1_3:38658866-38658885 Msa0117560:intron 15.0%
!!! TTCATTAAAAGTTTTACTCA+TGG - chr1_3:38649113-38649132 None:intergenic 20.0%
!! ATAGGTATAAAATTTCCAAA+AGG + chr1_3:38649236-38649255 Msa0117560:intron 20.0%
!! TTTCTATTCACAAATAATTG+AGG - chr1_3:38649510-38649529 None:intergenic 20.0%
!! TAAAAACTAATTGGTATTCA+AGG - chr1_3:38649552-38649571 None:intergenic 20.0%
!! CACTTATATCAATACATATA+TGG - chr1_3:38650529-38650548 None:intergenic 20.0%
!! CATCTTGAATATAATTCATT+TGG + chr1_3:38650925-38650944 Msa0117560:intron 20.0%
!! TTGAATATAATTCATTTGGA+TGG + chr1_3:38650929-38650948 Msa0117560:intron 20.0%
!! ATTTAAAAGGATGAGAAAAT+AGG + chr1_3:38651120-38651139 Msa0117560:intron 20.0%
!! GAATTGAAAGAAGAAAAATT+AGG + chr1_3:38651154-38651173 Msa0117560:intron 20.0%
!! AAAGAAGAAAAATTAGGTTT+GGG + chr1_3:38651160-38651179 Msa0117560:intron 20.0%
!! TCTAAATATTCTCATAAAGT+TGG - chr1_3:38651190-38651209 None:intergenic 20.0%
!!! ACTTTATATACTTTTTTGAG+AGG - chr1_3:38651407-38651426 None:intergenic 20.0%
!! AATGATTAAGAGAAATAGAA+TGG + chr1_3:38651486-38651505 Msa0117560:intron 20.0%
!! AGTAGTTAATAAGGATAATT+TGG - chr1_3:38651520-38651539 None:intergenic 20.0%
!! AAATTATCCTTATTAACTAC+TGG + chr1_3:38651519-38651538 Msa0117560:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_3:38651606-38651625 Msa0117560:intron 20.0%
!!! TTACTCTTTGATATGATTTT+AGG - chr1_3:38651739-38651758 None:intergenic 20.0%
!!! TTGTAGGATGAAATAATTTT+TGG + chr1_3:38651873-38651892 Msa0117560:intron 20.0%
!!! TGTGTTTTTATTTTGACTAA+GGG - chr1_3:38652296-38652315 None:intergenic 20.0%
!!! TTGTGTTTTTATTTTGACTA+AGG - chr1_3:38652297-38652316 None:intergenic 20.0%
!!! TCTTTTTTGCCTAATTTTTA+TGG - chr1_3:38652478-38652497 None:intergenic 20.0%
!! TAAAAATTAGGCAAAAAAGA+TGG + chr1_3:38652478-38652497 Msa0117560:intron 20.0%
!!! AATTTTTTTTCCAGCATAAT+AGG - chr1_3:38652504-38652523 None:intergenic 20.0%
!!! GTTAAACATTTTAAGACAAA+TGG - chr1_3:38652723-38652742 None:intergenic 20.0%
!!! TGATATCTTTGAAAAGTTTA+AGG + chr1_3:38653197-38653216 Msa0117560:intron 20.0%
!! AAAAAACAAAAGGTAATAAG+AGG + chr1_3:38653320-38653339 Msa0117560:intron 20.0%
!! AGAATTCTTAGAAAACTTAA+AGG + chr1_3:38653901-38653920 Msa0117560:intron 20.0%
!!! CAATGAAATTTTAGTATCTA+AGG - chr1_3:38653983-38654002 None:intergenic 20.0%
!! ACTAAAATTTCATTGAAAGA+AGG + chr1_3:38653988-38654007 Msa0117560:intron 20.0%
!! AATTTATCCTTATAATCTAC+TGG - chr1_3:38654435-38654454 None:intergenic 20.0%
!!! ATTAAAATTTTGACTAAGAG+AGG - chr1_3:38654574-38654593 None:intergenic 20.0%
!!! TTGGAAAAATTAGTTTATTC+TGG - chr1_3:38654751-38654770 None:intergenic 20.0%
!!! AGAATAAACTAATTTTTCCA+AGG + chr1_3:38654750-38654769 Msa0117560:intron 20.0%
!! AATATAAATGTACAGTGTTT+AGG + chr1_3:38654794-38654813 Msa0117560:intron 20.0%
!!! CTAATGATACACTTTTATTA+GGG + chr1_3:38655080-38655099 Msa0117560:intron 20.0%
!!! TACTTTTGGTTGAAATTTTA+GGG + chr1_3:38655446-38655465 Msa0117560:intron 20.0%
!!! TACGTAATTCTAAAAGTTAA+AGG - chr1_3:38656106-38656125 None:intergenic 20.0%
!! TCAATTATCTTTCCTTATAA+TGG + chr1_3:38656344-38656363 Msa0117560:intron 20.0%
!!! ATTTTCATTGTACCATTATA+AGG - chr1_3:38656359-38656378 None:intergenic 20.0%
!!! TTCACCTTAATATTTTTTGT+TGG + chr1_3:38656494-38656513 Msa0117560:intron 20.0%
!! GTTACCAACAAAAAATATTA+AGG - chr1_3:38656501-38656520 None:intergenic 20.0%
!!! GTAACCATAATTAGTATTTT+TGG + chr1_3:38656516-38656535 Msa0117560:intron 20.0%
!! TCAACCAAAAATACTAATTA+TGG - chr1_3:38656523-38656542 None:intergenic 20.0%
!!! GTAACCATAATTAGTATTTT+TGG + chr1_3:38656516-38656535 Msa0117560:intron 20.0%
!! TCAACCAAAAATACTAATTA+TGG - chr1_3:38656523-38656542 None:intergenic 20.0%
!!! ATTTTTGGTTGAGTTAATAA+TGG + chr1_3:38656562-38656581 Msa0117560:intron 20.0%
!!! CTATTTTGTAAGTATTTTGA+TGG + chr1_3:38656658-38656677 Msa0117560:intron 20.0%
!! TGTAAAAGGCAATATTATAA+TGG - chr1_3:38656730-38656749 None:intergenic 20.0%
!! AAAGATATGTTTATAAACGA+GGG - chr1_3:38657212-38657231 None:intergenic 20.0%
!! TAAAGATATGTTTATAAACG+AGG - chr1_3:38657213-38657232 None:intergenic 20.0%
!! TCGTTTATAAACATATCTTT+AGG + chr1_3:38657212-38657231 Msa0117560:intron 20.0%
!! CGTTTATAAACATATCTTTA+GGG + chr1_3:38657213-38657232 Msa0117560:intron 20.0%
!! ATATCTATGGATATAAATAG+AGG + chr1_3:38657444-38657463 Msa0117560:intron 20.0%
!!! TTAATTTGTCGGATTTTATT+TGG + chr1_3:38658180-38658199 Msa0117560:intron 20.0%
!! AAGAAAATAAGTTTGATGTA+AGG + chr1_3:38658956-38658975 Msa0117560:intron 20.0%
!! AGAAAATAAGTTTGATGTAA+GGG + chr1_3:38658957-38658976 Msa0117560:intron 20.0%
! ATTCGAGAAGAAAATTTCAT+GGG - chr1_3:38648825-38648844 None:intergenic 25.0%
! AAAATTTCCAAAAGGCTTAA+AGG + chr1_3:38649244-38649263 Msa0117560:CDS 25.0%
! AAATTTCCAAAAGGCTTAAA+GGG + chr1_3:38649245-38649264 Msa0117560:CDS 25.0%
! CAAATAAAGGAAAACAATGA+AGG + chr1_3:38649331-38649350 Msa0117560:CDS 25.0%
! TGAAAGTTAATATGGAAGTT+AGG - chr1_3:38649475-38649494 None:intergenic 25.0%
! CATGCATATGAAAGTTAATA+TGG - chr1_3:38649483-38649502 None:intergenic 25.0%
! AGTGATTATTGATGAAGTAA+GGG - chr1_3:38649679-38649698 None:intergenic 25.0%
!!! TTTTAGACTTTGATTTATGC+AGG + chr1_3:38649859-38649878 Msa0117560:intron 25.0%
! ACAAATAAAATAGTCTTCCT+TGG - chr1_3:38650148-38650167 None:intergenic 25.0%
!!! ATTTGTTAATTTGTGGTCAA+TGG + chr1_3:38650162-38650181 Msa0117560:intron 25.0%
!!! TTTGTTAATTTGTGGTCAAT+GGG + chr1_3:38650163-38650182 Msa0117560:intron 25.0%
! AAGAGAATAAGTTTGATGTA+AGG + chr1_3:38650245-38650264 Msa0117560:intron 25.0%
! AGAGAATAAGTTTGATGTAA+GGG + chr1_3:38650246-38650265 Msa0117560:intron 25.0%
! AGAACATATATCTTACTAGT+GGG - chr1_3:38650613-38650632 None:intergenic 25.0%
! AAGAACATATATCTTACTAG+TGG - chr1_3:38650614-38650633 None:intergenic 25.0%
!!! AATTTTAATTGCTTCTAGTC+AGG - chr1_3:38650778-38650797 None:intergenic 25.0%
! TATAATTCATTTGGATGGTT+TGG + chr1_3:38650934-38650953 Msa0117560:intron 25.0%
! CGAGAAGATCTTAAATAATT+TGG + chr1_3:38650964-38650983 Msa0117560:intron 25.0%
! GAAGATCTTAAATAATTTGG+AGG + chr1_3:38650967-38650986 Msa0117560:intron 25.0%
!!! AGAGAGGGTTTTAATTTAAA+AGG + chr1_3:38651107-38651126 Msa0117560:intron 25.0%
! GAAAGAAGAAAAATTAGGTT+TGG + chr1_3:38651159-38651178 Msa0117560:intron 25.0%
!!! AAAAGAAAAGCACTTATGAA+AGG + chr1_3:38651295-38651314 Msa0117560:intron 25.0%
!!! AAACGATACTCATTTTGAAA+CGG - chr1_3:38651437-38651456 None:intergenic 25.0%
!!! TTCAAAATGAGTATCGTTTT+AGG + chr1_3:38651438-38651457 Msa0117560:intron 25.0%
! AAACTAACCAGTAGTTAATA+AGG - chr1_3:38651529-38651548 None:intergenic 25.0%
! GTAGTGTACATAGTATTAAT+TGG + chr1_3:38651568-38651587 Msa0117560:intron 25.0%
! TGTACATAGTATTAATTGGA+GGG + chr1_3:38651572-38651591 Msa0117560:intron 25.0%
! TGATGATTTACAGAATATTG+AGG + chr1_3:38651782-38651801 Msa0117560:intron 25.0%
! AAATTATTTCATCCTACAAG+TGG - chr1_3:38651872-38651891 None:intergenic 25.0%
!!! TGTTTGTTGTTAAAGCTTAT+TGG + chr1_3:38652412-38652431 Msa0117560:intron 25.0%
! ACCTCAAATCCATAAAAATT+AGG + chr1_3:38652466-38652485 Msa0117560:intron 25.0%
! ATTTGAATGTTCGATGAATT+AGG + chr1_3:38652808-38652827 Msa0117560:intron 25.0%
! TTAGATTGTTCTCCTATTAT+TGG + chr1_3:38652888-38652907 Msa0117560:intron 25.0%
! GATAACAAGAATAGATTTCA+AGG + chr1_3:38653500-38653519 Msa0117560:intron 25.0%
!!! GATAATTGTTTTGTCCTTTT+AGG + chr1_3:38653923-38653942 Msa0117560:intron 25.0%
!!! ATTCTAGAATATCTCCTAAA+AGG - chr1_3:38653940-38653959 None:intergenic 25.0%
!!! TTTAGGAGATATTCTAGAAT+TGG + chr1_3:38653940-38653959 Msa0117560:intron 25.0%
!!! TTAGGAGATATTCTAGAATT+GGG + chr1_3:38653941-38653960 Msa0117560:intron 25.0%
! TAATTGAGTGATTATACTTG+AGG + chr1_3:38654034-38654053 Msa0117560:intron 25.0%
! AATTGAGTGATTATACTTGA+GGG + chr1_3:38654035-38654054 Msa0117560:intron 25.0%
! AAAAGGAAATTGTAGGAATT+AGG + chr1_3:38654065-38654084 Msa0117560:intron 25.0%
! AAAGGAAATTGTAGGAATTA+GGG + chr1_3:38654066-38654085 Msa0117560:intron 25.0%
! TATTCCAAAGAACAAGATAA+AGG - chr1_3:38654250-38654269 None:intergenic 25.0%
!! TTGAACTTAACTTTTACTGA+GGG - chr1_3:38654412-38654431 None:intergenic 25.0%
! TCAAATAGGATTATTTGTAG+TGG - chr1_3:38654525-38654544 None:intergenic 25.0%
!!! ATTTTCAGGGTTAATCAATT+GGG - chr1_3:38654644-38654663 None:intergenic 25.0%
!!! AATTTTCAGGGTTAATCAAT+TGG - chr1_3:38654645-38654664 None:intergenic 25.0%
! TGATTAACCCTGAAAATTTA+AGG + chr1_3:38654647-38654666 Msa0117560:intron 25.0%
!! TAATGCACCTTAAATTTTCA+GGG - chr1_3:38654657-38654676 None:intergenic 25.0%
!! TTAATGCACCTTAAATTTTC+AGG - chr1_3:38654658-38654677 None:intergenic 25.0%
!!! GATTTAGTCTTTTGAGAAAA+AGG + chr1_3:38654872-38654891 Msa0117560:intron 25.0%
!! GCTAATGATACACTTTTATT+AGG + chr1_3:38655079-38655098 Msa0117560:intron 25.0%
!! TTTTATAAGAGTAGAGTCTT+GGG + chr1_3:38655184-38655203 Msa0117560:intron 25.0%
! CAAATCAAAGAATTTCTTGA+TGG + chr1_3:38655251-38655270 Msa0117560:intron 25.0%
!!! GTACTTTTGGTTGAAATTTT+AGG + chr1_3:38655445-38655464 Msa0117560:intron 25.0%
!! CATTATCTATGTTTTCTTTC+TGG + chr1_3:38655477-38655496 Msa0117560:intron 25.0%
! TTTCTTTCTGGATTTATCTT+AGG + chr1_3:38655489-38655508 Msa0117560:intron 25.0%
!! AGTGTTTTATATAGCTAGTT+CGG - chr1_3:38655671-38655690 None:intergenic 25.0%
! ACTAGCTATATAAAACACTT+TGG + chr1_3:38655672-38655691 Msa0117560:intron 25.0%
!! TTGTGAATTTTCTTTACACT+TGG + chr1_3:38655738-38655757 Msa0117560:intron 25.0%
! AAAACCAACATCAAAATTGT+TGG - chr1_3:38655876-38655895 None:intergenic 25.0%
!!! TGGTTTTTCAATTTAGCTTT+TGG + chr1_3:38655889-38655908 Msa0117560:intron 25.0%
!!! GCCTTTAACTTTTAGAAAAT+CGG + chr1_3:38656059-38656078 Msa0117560:intron 25.0%
!!! TCCGATTTTCTAAAAGTTAA+AGG - chr1_3:38656063-38656082 None:intergenic 25.0%
!! ACTAACTAAAAGTGCAAAAT+TGG + chr1_3:38656397-38656416 Msa0117560:intron 25.0%
!!! ATTAGTATTTTTGGTTGAGT+TGG + chr1_3:38656525-38656544 Msa0117560:intron 25.0%
! AAATACTTACAAAATAGCGA+GGG - chr1_3:38656655-38656674 None:intergenic 25.0%
! AAAATACTTACAAAATAGCG+AGG - chr1_3:38656656-38656675 None:intergenic 25.0%
!!! ATTTGGTGCGTAAAAATAAA+TGG + chr1_3:38657032-38657051 Msa0117560:intron 25.0%
!!! CCTTAATGATTTTTTTGGTA+AGG - chr1_3:38657181-38657200 None:intergenic 25.0%
! CCTTACCAAAAAAATCATTA+AGG + chr1_3:38657178-38657197 Msa0117560:intron 25.0%
! TATACCACATCATATATCTA+TGG + chr1_3:38657431-38657450 Msa0117560:intron 25.0%
! ATATCCATAGATATATGATG+TGG - chr1_3:38657438-38657457 None:intergenic 25.0%
!!! ATTTCAGAGTTTTATTCGTT+TGG + chr1_3:38657538-38657557 Msa0117560:intron 25.0%
! AAGCTTATGAAAACTTTGAT+GGG - chr1_3:38657691-38657710 None:intergenic 25.0%
! AAAGCTTATGAAAACTTTGA+TGG - chr1_3:38657692-38657711 None:intergenic 25.0%
! GTTATTCACAACTTAACATA+TGG + chr1_3:38657843-38657862 Msa0117560:intron 25.0%
!! AGATCTACTTGATATTTTGT+TGG + chr1_3:38658349-38658368 Msa0117560:CDS 25.0%
!!! CTCTCTTGTCAATTTTATTT+CGG - chr1_3:38658396-38658415 None:intergenic 25.0%
! TATGTATATTTCGTCAATCA+TGG - chr1_3:38658463-38658482 None:intergenic 25.0%
! AATATCGCAATATCCATAAA+AGG + chr1_3:38658498-38658517 Msa0117560:intron 25.0%
!!! TTTTAGAGTATGTTTTATGC+AGG + chr1_3:38658570-38658589 Msa0117560:intron 25.0%
!! AAAGAGATTGATTCACAAAT+AGG + chr1_3:38658688-38658707 Msa0117560:intron 25.0%
!! ATTTAGTAATTTGTGGTCAA+TGG + chr1_3:38658873-38658892 Msa0117560:intron 25.0%
!! TTTAGTAATTTGTGGTCAAT+GGG + chr1_3:38658874-38658893 Msa0117560:intron 25.0%
! GAAAATAAGTTTGATGTAAG+GGG + chr1_3:38658958-38658977 Msa0117560:intron 25.0%
! AATTTCCAATTTATGCCATT+TGG + chr1_3:38658985-38659004 Msa0117560:intron 25.0%
! AAACAATTAAAACGAGGAAT+GGG - chr1_3:38659180-38659199 None:intergenic 25.0%
! AAAACAATTAAAACGAGGAA+TGG - chr1_3:38659181-38659200 None:intergenic 25.0%
! AAAGGAAAACAATTAAAACG+AGG - chr1_3:38659186-38659205 None:intergenic 25.0%
!!! CGTTTTAATTGTTTTCCTTT+TGG + chr1_3:38659186-38659205 Msa0117560:CDS 25.0%
! GTTCTTCTTTCTAGTAAGTA+GGG - chr1_3:38648606-38648625 None:intergenic 30.0%
! TGTTCTTCTTTCTAGTAAGT+AGG - chr1_3:38648607-38648626 None:intergenic 30.0%
CAAATATAGGTAAAGCAAGA+GGG - chr1_3:38648652-38648671 None:intergenic 30.0%
AGGTGAAAATGTCCAAATAT+AGG - chr1_3:38648665-38648684 None:intergenic 30.0%
TTGAAAGCTTGTGAAAACTT+TGG - chr1_3:38648712-38648731 None:intergenic 30.0%
CACAAGCTTTCAATTCAATA+TGG + chr1_3:38648719-38648738 Msa0117560:CDS 30.0%
CCTAGAAAGAGTTTCATTAT+GGG - chr1_3:38648746-38648765 None:intergenic 30.0%
GGACTAGAAATTACTATACA+AGG - chr1_3:38648776-38648795 None:intergenic 30.0%
GATTCGAGAAGAAAATTTCA+TGG - chr1_3:38648826-38648845 None:intergenic 30.0%
GCAATTGACTACTTATCATA+TGG + chr1_3:38648860-38648879 Msa0117560:CDS 30.0%
AACTTCCAATATTCACCATA+AGG - chr1_3:38648908-38648927 None:intergenic 30.0%
TCACCAATAGAATCATAACA+AGG + chr1_3:38649083-38649102 Msa0117560:CDS 30.0%
! CATCCTTGTTATGATTCTAT+TGG - chr1_3:38649089-38649108 None:intergenic 30.0%
ATAGTAATGTTGAAGACCTT+AGG + chr1_3:38649137-38649156 Msa0117560:CDS 30.0%
!! AAGATTTTTCAGAACTTGCA+GGG + chr1_3:38649170-38649189 Msa0117560:CDS 30.0%
!! GGTTTTGTAAGAATTTGCAT+AGG + chr1_3:38649218-38649237 Msa0117560:intron 30.0%
! GGATCTTCTTGATATTTTGT+TGG + chr1_3:38649366-38649385 Msa0117560:CDS 30.0%
GAGTGATTATTGATGAAGTA+AGG - chr1_3:38649680-38649699 None:intergenic 30.0%
AATAATCACTCTCTTGTTAG+CGG + chr1_3:38649689-38649708 Msa0117560:intron 30.0%
! TATTTCGTTGGTGAAAATGT+TGG + chr1_3:38649769-38649788 Msa0117560:intron 30.0%
! GAAGAGATTGATTCAGTAAT+AGG + chr1_3:38649977-38649996 Msa0117560:CDS 30.0%
! TTGAGTATAGCTTGCAAATA+TGG - chr1_3:38650043-38650062 None:intergenic 30.0%
TCTGAGAATTGTAATGTTTG+TGG + chr1_3:38650112-38650131 Msa0117560:intron 30.0%
CTGAGAATTGTAATGTTTGT+GGG + chr1_3:38650113-38650132 Msa0117560:intron 30.0%
GAGAATAAGTTTGATGTAAG+GGG + chr1_3:38650247-38650266 Msa0117560:intron 30.0%
AATTTCCAACTTATGCCATT+TGG + chr1_3:38650274-38650293 Msa0117560:intron 30.0%
!! CAATGATTCAGTGTTTTGAA+TGG + chr1_3:38650362-38650381 Msa0117560:intron 30.0%
! GTTTTCATAGCTTTCCTTTT+GGG + chr1_3:38650476-38650495 Msa0117560:intron 30.0%
! TTTTCATAGCTTTCCTTTTG+GGG + chr1_3:38650477-38650496 Msa0117560:intron 30.0%
TCTTGACTGTTAAATGCATT+TGG - chr1_3:38650861-38650880 None:intergenic 30.0%
AATGCATTTAACAGTCAAGA+CGG + chr1_3:38650861-38650880 Msa0117560:intron 30.0%
! TAACATCTAAAACCAGTAGT+TGG + chr1_3:38651013-38651032 Msa0117560:intron 30.0%
! CTGAATTGACTCAAATGATT+CGG + chr1_3:38651260-38651279 Msa0117560:intron 30.0%
GTGTACATAGTATTAATTGG+AGG + chr1_3:38651571-38651590 Msa0117560:intron 30.0%
!! AAGCGACACTAATTTTGAAA+CGG + chr1_3:38651672-38651691 Msa0117560:intron 30.0%
TCTCAAGAGAAATATGTCAA+AGG + chr1_3:38652003-38652022 Msa0117560:intron 30.0%
TTAGTGGTCTAGATTTAAAC+TGG - chr1_3:38652135-38652154 None:intergenic 30.0%
GAATGAAAAGAAAAGAGAGA+TGG - chr1_3:38652162-38652181 None:intergenic 30.0%
! TCTCTCTCTATCTTTTTGTA+TGG + chr1_3:38652180-38652199 Msa0117560:intron 30.0%
! GCCTAATTTTTATGGATTTG+AGG - chr1_3:38652470-38652489 None:intergenic 30.0%
!! AATATTTTGGACCCCAAAAT+TGG + chr1_3:38652633-38652652 Msa0117560:intron 30.0%
!! ATATTTTGGACCCCAAAATT+GGG + chr1_3:38652634-38652653 Msa0117560:intron 30.0%
AATGTTCGATGAATTAGGAT+AGG + chr1_3:38652813-38652832 Msa0117560:intron 30.0%
TCACTTGTAAAACTAGGTTA+TGG + chr1_3:38652915-38652934 Msa0117560:intron 30.0%
CACTTGTAAAACTAGGTTAT+GGG + chr1_3:38652916-38652935 Msa0117560:intron 30.0%
! AAACATAGCTCTATGTTGTT+TGG - chr1_3:38653046-38653065 None:intergenic 30.0%
!! TATGTTCACTTGGTTCTTTT+GGG + chr1_3:38653074-38653093 Msa0117560:intron 30.0%
CCTTGAGAAATCATTAATCA+TGG - chr1_3:38653144-38653163 None:intergenic 30.0%
CCATGATTAATGATTTCTCA+AGG + chr1_3:38653141-38653160 Msa0117560:intron 30.0%
AAGGAATAACATACCTTTGT+TGG + chr1_3:38653216-38653235 Msa0117560:intron 30.0%
TACCTTTGTTGGAAATCAAA+TGG + chr1_3:38653227-38653246 Msa0117560:intron 30.0%
! TTCCATTTGATTTCCAACAA+AGG - chr1_3:38653232-38653251 None:intergenic 30.0%
!!! ACAATAGCCAAGAGTTTTTT+TGG + chr1_3:38653277-38653296 Msa0117560:intron 30.0%
AATTGCTCCAAAAAAACTCT+TGG - chr1_3:38653287-38653306 None:intergenic 30.0%
! CGAGTCTTGTAAAAAACAAA+AGG + chr1_3:38653310-38653329 Msa0117560:intron 30.0%
! AAACGCATGAATGACAATTT+TGG + chr1_3:38653384-38653403 Msa0117560:intron 30.0%
! TACGTTTTCCAGAAATTTCT+GGG + chr1_3:38653434-38653453 Msa0117560:intron 30.0%
TGCTAATTACTTGACTATGA+AGG + chr1_3:38653550-38653569 Msa0117560:intron 30.0%
GATAGTCAAATTAACATCAC+CGG + chr1_3:38653647-38653666 Msa0117560:intron 30.0%
TAAAACCGGAGAAAATTAGT+GGG - chr1_3:38653810-38653829 None:intergenic 30.0%
!!! ATTTTCTCCGGTTTTAGTTT+CGG + chr1_3:38653814-38653833 Msa0117560:intron 30.0%
! TTTCTAAGAATTCTCTCTTC+TGG - chr1_3:38653895-38653914 None:intergenic 30.0%
TTGAGGAAAAAGGAAATTGT+AGG + chr1_3:38654058-38654077 Msa0117560:intron 30.0%
! TTGTAACAATGTTTTATCCC+TGG + chr1_3:38654121-38654140 Msa0117560:intron 30.0%
TTGTCAATGAGTATTTACCA+GGG - chr1_3:38654141-38654160 None:intergenic 30.0%
TTTGTCAATGAGTATTTACC+AGG - chr1_3:38654142-38654161 None:intergenic 30.0%
ACTTCCTTTATCTTGTTCTT+TGG + chr1_3:38654243-38654262 Msa0117560:intron 30.0%
! GTTGAACTTAACTTTTACTG+AGG - chr1_3:38654413-38654432 None:intergenic 30.0%
AGTTCAACCAGTAGATTATA+AGG + chr1_3:38654425-38654444 Msa0117560:intron 30.0%
CATTCATTTCTTAAATGCCA+AGG + chr1_3:38654455-38654474 Msa0117560:intron 30.0%
! TTTTCCAGATCTTTATTCCT+TGG - chr1_3:38654475-38654494 None:intergenic 30.0%
! TAATCCTATTTGAAGTGTGT+TGG + chr1_3:38654532-38654551 Msa0117560:intron 30.0%
ATCAATTGGGTTAAATCTAG+TGG - chr1_3:38654631-38654650 None:intergenic 30.0%
! ATGATACACTTTTATTAGGG+AGG + chr1_3:38655083-38655102 Msa0117560:intron 30.0%
! TGATACACTTTTATTAGGGA+GGG + chr1_3:38655084-38655103 Msa0117560:intron 30.0%
! CTTTTATAAGAGTAGAGTCT+TGG + chr1_3:38655183-38655202 Msa0117560:intron 30.0%
TTTATAAGAGTAGAGTCTTG+GGG + chr1_3:38655185-38655204 Msa0117560:intron 30.0%
TGAACCATCATTTATGCTTA+TGG + chr1_3:38655216-38655235 Msa0117560:intron 30.0%
ACTACCATAAGCATAAATGA+TGG - chr1_3:38655223-38655242 None:intergenic 30.0%
TAATCTTGAGAGTCTAAAAG+TGG + chr1_3:38655409-38655428 Msa0117560:intron 30.0%
AATCTTGAGAGTCTAAAAGT+GGG + chr1_3:38655410-38655429 Msa0117560:intron 30.0%
TTTATCTTAGGATCTCATTG+TGG + chr1_3:38655501-38655520 Msa0117560:intron 30.0%
TTATCTTAGGATCTCATTGT+GGG + chr1_3:38655502-38655521 Msa0117560:intron 30.0%
CAAACATACTCAAAGATCAA+TGG - chr1_3:38655721-38655740 None:intergenic 30.0%
GTATCATGCATCTAAATTCT+TGG + chr1_3:38655826-38655845 Msa0117560:intron 30.0%
!! ACAACCAACAATTTTGATGT+TGG + chr1_3:38655869-38655888 Msa0117560:intron 30.0%
AGCTAAATTCCACTTAGTTA+AGG - chr1_3:38655981-38656000 None:intergenic 30.0%
!! TAAGTGGAATTTAGCTTGTT+AGG + chr1_3:38655985-38656004 Msa0117560:intron 30.0%
CTAATTGATCATGGCTTAAT+GGG - chr1_3:38656175-38656194 None:intergenic 30.0%
TCTAATTGATCATGGCTTAA+TGG - chr1_3:38656176-38656195 None:intergenic 30.0%
AACTGACATCTAATTGATCA+TGG - chr1_3:38656184-38656203 None:intergenic 30.0%
CAAATTTCACATCAGAAACT+TGG - chr1_3:38656271-38656290 None:intergenic 30.0%
! TCTGATGTGAAATTTGTTCA+CGG + chr1_3:38656275-38656294 Msa0117560:intron 30.0%
!! TATAATGGATGTAGCTAATC+TGG - chr1_3:38656715-38656734 None:intergenic 30.0%
TGATTGCATCTGAGAATTTA+TGG + chr1_3:38657115-38657134 Msa0117560:intron 30.0%
! AACCTTAAAAGACTGTTTTG+TGG - chr1_3:38657158-38657177 None:intergenic 30.0%
!!! CCTCACCTTAATGATTTTTT+TGG - chr1_3:38657186-38657205 None:intergenic 30.0%
CCAAAAAAATCATTAAGGTG+AGG + chr1_3:38657183-38657202 Msa0117560:intron 30.0%
!!! ACCAGCATATTTTTCAAGTA+TGG + chr1_3:38657500-38657519 Msa0117560:intron 30.0%
!! GTTCTTCTTTCTAGTTAGTA+TGG - chr1_3:38657589-38657608 None:intergenic 30.0%
AGCTTATGAAAACTTTGATG+GGG - chr1_3:38657690-38657709 None:intergenic 30.0%
CATAAGCTTTCAATTCGTTA+TGG + chr1_3:38657702-38657721 Msa0117560:CDS 30.0%
CCAATGAAAAGTTGCATTAT+GGG - chr1_3:38657729-38657748 None:intergenic 30.0%
GATTTCATATTTGCACCTTA+TGG + chr1_3:38657873-38657892 Msa0117560:intron 30.0%
! ATAGTTTCTTTTTGCCTCAA+GGG - chr1_3:38657972-38657991 None:intergenic 30.0%
!! TTTTAAGAATTGGGATATGC+AGG + chr1_3:38658205-38658224 Msa0117560:intron 30.0%
TTTAAGAATTGGGATATGCA+GGG + chr1_3:38658206-38658225 Msa0117560:intron 30.0%
GGTTTAACAAAAGGCTTAAA+GGG + chr1_3:38658228-38658247 Msa0117560:CDS 30.0%
GTTTAACAAAAGGCTTAAAG+GGG + chr1_3:38658229-38658248 Msa0117560:CDS 30.0%
AGGAAGAAAAGGAAAGAAAA+TGG + chr1_3:38658308-38658327 Msa0117560:CDS 30.0%
AAAAGGAAAGAAAATGGTGA+AGG + chr1_3:38658314-38658333 Msa0117560:CDS 30.0%
! TTTTATGCAGGACATATTCA+TGG + chr1_3:38658582-38658601 Msa0117560:intron 30.0%
! AGATTGATTCACAAATAGGA+AGG + chr1_3:38658692-38658711 Msa0117560:intron 30.0%
CTAAATAAAATAGTCTTCGC+TGG - chr1_3:38658859-38658878 None:intergenic 30.0%
AACAATTAAAACGAGGAATG+GGG - chr1_3:38659179-38659198 None:intergenic 30.0%
AAGTAGGGTTTGAATTGCAA+TGG - chr1_3:38648591-38648610 None:intergenic 35.0%
CCAAATATAGGTAAAGCAAG+AGG - chr1_3:38648653-38648672 None:intergenic 35.0%
CCTCTTGCTTTACCTATATT+TGG + chr1_3:38648650-38648669 Msa0117560:CDS 35.0%
CTGGTAGTAACTTAGACATA+AGG - chr1_3:38648685-38648704 None:intergenic 35.0%
CCCATAATGAAACTCTTTCT+AGG + chr1_3:38648743-38648762 Msa0117560:CDS 35.0%
GCCTAGAAAGAGTTTCATTA+TGG - chr1_3:38648747-38648766 None:intergenic 35.0%
!!! ATGGGTTTTAAGAAACTCCT+TGG - chr1_3:38648807-38648826 None:intergenic 35.0%
GATTTCATGTTTGCACCTTA+TGG + chr1_3:38648890-38648909 Msa0117560:CDS 35.0%
TTGCACCTTATGGTGAATAT+TGG + chr1_3:38648900-38648919 Msa0117560:CDS 35.0%
AATCTTGAACCATGTTCCTA+AGG - chr1_3:38649156-38649175 None:intergenic 35.0%
!! CAAGATTTTTCAGAACTTGC+AGG + chr1_3:38649169-38649188 Msa0117560:CDS 35.0%
GAAAAGGATGGAAACAATGA+TGG + chr1_3:38649273-38649292 Msa0117560:CDS 35.0%
AGAGGAAAGGAAGCAAATAA+AGG + chr1_3:38649318-38649337 Msa0117560:CDS 35.0%
ACAATGAAGGTTCTCATGTT+AGG + chr1_3:38649344-38649363 Msa0117560:CDS 35.0%
CAATGAAGGTTCTCATGTTA+GGG + chr1_3:38649345-38649364 Msa0117560:CDS 35.0%
AGAACAAGAACACTGAGATT+GGG + chr1_3:38649398-38649417 Msa0117560:CDS 35.0%
!!! ATGCAGGACATATTTTTAGC+AGG + chr1_3:38649875-38649894 Msa0117560:intron 35.0%
ATCTTCGACAACAATCGAAT+GGG + chr1_3:38649907-38649926 Msa0117560:CDS 35.0%
AATAAACAACCCACATGTGA+TGG + chr1_3:38649943-38649962 Msa0117560:CDS 35.0%
GCTTGCAAATATGGAAGATT+GGG - chr1_3:38650034-38650053 None:intergenic 35.0%
AGCTTGCAAATATGGAAGAT+TGG - chr1_3:38650035-38650054 None:intergenic 35.0%
!! TTAATTTGTGGTCAATGGGT+AGG + chr1_3:38650167-38650186 Msa0117560:intron 35.0%
! TAATTTGTGGTCAATGGGTA+GGG + chr1_3:38650168-38650187 Msa0117560:intron 35.0%
! GTGGATTCTCCCATAATTTT+GGG - chr1_3:38650195-38650214 None:intergenic 35.0%
! TGTGGATTCTCCCATAATTT+TGG - chr1_3:38650196-38650215 None:intergenic 35.0%
ATCATTGCAGCAAGATTTGT+TGG - chr1_3:38650349-38650368 None:intergenic 35.0%
!! CAGTGTTTTGAATGGAAAGT+TGG + chr1_3:38650370-38650389 Msa0117560:intron 35.0%
!! TGTTTTGAATGGAAAGTTGG+TGG + chr1_3:38650373-38650392 Msa0117560:intron 35.0%
AGCTATGAAAACGAGGAATA+GGG - chr1_3:38650468-38650487 None:intergenic 35.0%
AAGCTATGAAAACGAGGAAT+AGG - chr1_3:38650469-38650488 None:intergenic 35.0%
AAAGGAAAGCTATGAAAACG+AGG - chr1_3:38650475-38650494 None:intergenic 35.0%
! CGTTTTCATAGCTTTCCTTT+TGG + chr1_3:38650475-38650494 Msa0117560:intron 35.0%
! TTGATAGTCTATTCCCCAAA+AGG - chr1_3:38650493-38650512 None:intergenic 35.0%
! TTTCAAGTCAACAGAAGCAA+AGG + chr1_3:38650796-38650815 Msa0117560:intron 35.0%
CTCAAGAAGAATGTATCTGA+TGG + chr1_3:38650902-38650921 Msa0117560:intron 35.0%
AAAAGAGCCATGTTCTAATC+AGG + chr1_3:38651067-38651086 Msa0117560:intron 35.0%
TAATCAGGTGTGAGTAAACT+TGG + chr1_3:38651082-38651101 Msa0117560:intron 35.0%
!!! GATACTCATTTTGAAACGGA+GGG - chr1_3:38651433-38651452 None:intergenic 35.0%
!!! GACACTAATTTTGAAACGGA+GGG + chr1_3:38651676-38651695 Msa0117560:intron 35.0%
!! ATGATTTTAGGTGAGATTGC+AGG - chr1_3:38651727-38651746 None:intergenic 35.0%
! TAGATCTTTTGACCACTTGT+AGG + chr1_3:38651857-38651876 Msa0117560:intron 35.0%
AGAAGCTATGATTACCTTAG+AGG + chr1_3:38651899-38651918 Msa0117560:intron 35.0%
AGAAATATGTCAAAGGCGAT+TGG + chr1_3:38652010-38652029 Msa0117560:intron 35.0%
TTCACTTCAAGTGAGATTGT+CGG + chr1_3:38652071-38652090 Msa0117560:intron 35.0%
!! AAAGAGAGATGGAGTTTTAG+TGG - chr1_3:38652151-38652170 None:intergenic 35.0%
GGTAAAAAATGTCAGGTTCA+AGG + chr1_3:38652220-38652239 Msa0117560:intron 35.0%
CTCGACTCTCAAATAAAAAC+AGG + chr1_3:38652270-38652289 Msa0117560:intron 35.0%
AAAAAGATGGCCTATTATGC+TGG + chr1_3:38652491-38652510 Msa0117560:intron 35.0%
AAAACAAAAATCAGCCCTCA+CGG + chr1_3:38652535-38652554 Msa0117560:intron 35.0%
!! TATTTTGGACCCCAAAATTG+GGG + chr1_3:38652635-38652654 Msa0117560:intron 35.0%
ACAAACAACTCTATTGAGCT+GGG - chr1_3:38652664-38652683 None:intergenic 35.0%
TACAAACAACTCTATTGAGC+TGG - chr1_3:38652665-38652684 None:intergenic 35.0%
ACAAGTGAACGACCAATAAT+AGG - chr1_3:38652903-38652922 None:intergenic 35.0%
GTAAAACTAGGTTATGGGAT+TGG + chr1_3:38652921-38652940 Msa0117560:intron 35.0%
TTGTGAGTAGTATGTTCACT+TGG + chr1_3:38653064-38653083 Msa0117560:intron 35.0%
!! GTATGTTCACTTGGTTCTTT+TGG + chr1_3:38653073-38653092 Msa0117560:intron 35.0%
ATGATTTCTCAAGGAGAGTA+TGG + chr1_3:38653150-38653169 Msa0117560:intron 35.0%
! TGATTTCTCAAGGAGAGTAT+GGG + chr1_3:38653151-38653170 Msa0117560:intron 35.0%
! CAAAAGGTAATAAGAGGCAT+AGG + chr1_3:38653326-38653345 Msa0117560:intron 35.0%
! CTACGTTTTCCAGAAATTTC+TGG + chr1_3:38653433-38653452 Msa0117560:intron 35.0%
! ACGTTTTCCAGAAATTTCTG+GGG + chr1_3:38653435-38653454 Msa0117560:intron 35.0%
CTAAAACCGGAGAAAATTAG+TGG - chr1_3:38653811-38653830 None:intergenic 35.0%
!!! TTTTCTCCGGTTTTAGTTTC+GGG + chr1_3:38653815-38653834 Msa0117560:intron 35.0%
! TAGGAATTAGGGTTTGTTCT+TGG + chr1_3:38654077-38654096 Msa0117560:intron 35.0%
ACCTAAATTGACCTACGTTT+GGG - chr1_3:38654187-38654206 None:intergenic 35.0%
AACCTAAATTGACCTACGTT+TGG - chr1_3:38654188-38654207 None:intergenic 35.0%
!! ACACACTAAGTTTTGTACTC+AGG - chr1_3:38654213-38654232 None:intergenic 35.0%
!! GCTTCAATTGTTAGCTTTGT+AGG + chr1_3:38654327-38654346 Msa0117560:intron 35.0%
AATGCCAAGGAATAAAGATC+TGG + chr1_3:38654468-38654487 Msa0117560:intron 35.0%
!! TTTGTAGTGGATGTAGCAAA+TGG - chr1_3:38654512-38654531 None:intergenic 35.0%
!! CTAAGAGAGGTATCCATATT+TGG - chr1_3:38654561-38654580 None:intergenic 35.0%
ATGGCTAAACTCTCATAACA+TGG - chr1_3:38654606-38654625 None:intergenic 35.0%
TGGGTTAAATCTAGTGGAAA+TGG - chr1_3:38654625-38654644 None:intergenic 35.0%
TAGTGATACTTGTGACAACT+TGG - chr1_3:38654964-38654983 None:intergenic 35.0%
TTATAAGAGTAGAGTCTTGG+GGG + chr1_3:38655186-38655205 Msa0117560:intron 35.0%
! TTCTTGATGGCATGAGAAAT+TGG + chr1_3:38655264-38655283 Msa0117560:intron 35.0%
GGAGTGAATAAATTATCGTG+AGG + chr1_3:38655285-38655304 Msa0117560:intron 35.0%
TCTAAAAGTGGGAACGTTTA+GGG + chr1_3:38655421-38655440 Msa0117560:intron 35.0%
ATACTCAAAGATCAATGGCA+AGG - chr1_3:38655716-38655735 None:intergenic 35.0%
TTGTCATTGCCTTAACTAAG+TGG + chr1_3:38655969-38655988 Msa0117560:intron 35.0%
TATATCCAACGAACAATGTG+TGG + chr1_3:38656300-38656319 Msa0117560:intron 35.0%
AACTAACAATGTAGTCCCTA+AGG - chr1_3:38656609-38656628 None:intergenic 35.0%
TGCTGCGTGAATATAAATGT+TGG + chr1_3:38656885-38656904 Msa0117560:intron 35.0%
GCTGCGTGAATATAAATGTT+GGG + chr1_3:38656886-38656905 Msa0117560:intron 35.0%
GGTGCGTAAAAATAAATGGT+AGG + chr1_3:38657036-38657055 Msa0117560:intron 35.0%
AATGGTAGGTAAAACGAAAG+CGG + chr1_3:38657050-38657069 Msa0117560:intron 35.0%
AGCGGAAATATAATAGCATG+TGG + chr1_3:38657068-38657087 Msa0117560:intron 35.0%
! CTCCACAAAACAGTCTTTTA+AGG + chr1_3:38657153-38657172 Msa0117560:intron 35.0%
CTGGTTATGACCTATGTTAA+TGG - chr1_3:38657485-38657504 None:intergenic 35.0%
GCCATACTTGAAAAATATGC+TGG - chr1_3:38657504-38657523 None:intergenic 35.0%
AGGTGAAAATGTCCTATGAT+AGG - chr1_3:38657651-38657670 None:intergenic 35.0%
TTATGAAAACTTTGATGGGG+AGG - chr1_3:38657687-38657706 None:intergenic 35.0%
! CCCATAATGCAACTTTTCAT+TGG + chr1_3:38657726-38657745 Msa0117560:CDS 35.0%
GCCAATGAAAAGTTGCATTA+TGG - chr1_3:38657730-38657749 None:intergenic 35.0%
TTGTGTAGTAATTTCCAGTC+CGG + chr1_3:38657758-38657777 Msa0117560:intron 35.0%
ACTTATAAAGCGATTCGAGA+AGG - chr1_3:38657820-38657839 None:intergenic 35.0%
CAACTTAACATATGGCTCAA+AGG + chr1_3:38657851-38657870 Msa0117560:intron 35.0%
AACTTCCAGTATTCACCATA+AGG - chr1_3:38657891-38657910 None:intergenic 35.0%
! CATAGTTTCTTTTTGCCTCA+AGG - chr1_3:38657973-38657992 None:intergenic 35.0%
TGAGGCAAAAAGAAACTATG+AGG + chr1_3:38657973-38657992 Msa0117560:CDS 35.0%
CATACTTGTGATGATTCTGT+TGG - chr1_3:38658072-38658091 None:intergenic 35.0%
CAACAGAATCATCACAAGTA+TGG + chr1_3:38658070-38658089 Msa0117560:CDS 35.0%
AAGATAGTGTAGAGCTTTCA+GGG + chr1_3:38658153-38658172 Msa0117560:intron 35.0%
!! TTCAGGGAGGTTTAATTTGT+CGG + chr1_3:38658169-38658188 Msa0117560:intron 35.0%
TTAAGAATTGGGATATGCAG+GGG + chr1_3:38658207-38658226 Msa0117560:intron 35.0%
ATATGCAGGGGTTTAACAAA+AGG + chr1_3:38658219-38658238 Msa0117560:CDS 35.0%
GGGTTTAACAAAAGGCTTAA+AGG + chr1_3:38658227-38658246 Msa0117560:CDS 35.0%
ATCAAGAGGAAAGGAAGAAA+AGG + chr1_3:38658297-38658316 Msa0117560:CDS 35.0%
GAATGTCAAAGCTTTCATCT+TGG + chr1_3:38658415-38658434 Msa0117560:CDS 35.0%
GTATATTTCGTCAATCATGG+AGG - chr1_3:38658460-38658479 None:intergenic 35.0%
AATAAACAACCCACATGTGA+TGG + chr1_3:38649943-38649962 Msa0117560:CDS 35.0%
AACATTAAGACTTCACCCTA+CGG + chr1_3:38650066-38650085 Msa0117560:intron 35.0%
TCTGAGAATCGTAATGTTTG+TGG + chr1_3:38658823-38658842 Msa0117560:intron 35.0%
! TAATTTGTGGTCAATGGGAA+GGG + chr1_3:38658879-38658898 Msa0117560:intron 35.0%
! ATGGATTCTCCCACAATTTT+GGG - chr1_3:38658906-38658925 None:intergenic 35.0%
! TATGGATTCTCCCACAATTT+TGG - chr1_3:38658907-38658926 None:intergenic 35.0%
! CTCTCTGGTTTAAACTCATA+TGG - chr1_3:38658925-38658944 None:intergenic 35.0%
CATATGAGTTTAAACCAGAG+AGG + chr1_3:38658923-38658942 Msa0117560:intron 35.0%
CAGTTCCAAATGGCATAAAT+TGG - chr1_3:38658993-38659012 None:intergenic 35.0%
! CAATTTATGCCATTTGGAAC+TGG + chr1_3:38658991-38659010 Msa0117560:intron 35.0%
CCATTCAAAACACTGAATCA+TGG - chr1_3:38650365-38650384 None:intergenic 35.0%
!! CCATGATTCAGTGTTTTGAA+TGG + chr1_3:38659073-38659092 Msa0117560:intron 35.0%
!! GATTCAGTGTTTTGAATGGA+AGG + chr1_3:38650366-38650385 Msa0117560:intron 35.0%
!! TGGTAATGGAACAGTTAACA+TGG + chr1_3:38659104-38659123 Msa0117560:CDS 35.0%
TAGGGTTTGAATTGCAATGG+TGG - chr1_3:38648588-38648607 None:intergenic 40.0%
TTGTGAAAACTTTGGTGAGC+TGG - chr1_3:38648704-38648723 None:intergenic 40.0%
TTCTAGTCCAGAAATAGCCA+AGG + chr1_3:38648787-38648806 Msa0117560:intron 40.0%
! AGAAACTCCTTGGCTATTTC+TGG - chr1_3:38648797-38648816 None:intergenic 40.0%
CTACTTATCATATGGCTCAC+AGG + chr1_3:38648868-38648887 Msa0117560:CDS 40.0%
ATATGCATGTCAGAGCTTCT+TGG + chr1_3:38648938-38648957 Msa0117560:CDS 40.0%
TGTTGAAGACCTTAGGAACA+TGG + chr1_3:38649144-38649163 Msa0117560:CDS 40.0%
TAAAGGGATGCAGAAAAGGA+TGG + chr1_3:38649261-38649280 Msa0117560:CDS 40.0%
! GATGGAAACAATGATGGAGA+TGG + chr1_3:38649279-38649298 Msa0117560:CDS 40.0%
! AATGATGGAGATGGCGATAA+GGG + chr1_3:38649288-38649307 Msa0117560:CDS 40.0%
TTTGCTTCCTTTCCTCTTGA+CGG - chr1_3:38649315-38649334 None:intergenic 40.0%
GAGAACAAGAACACTGAGAT+TGG + chr1_3:38649397-38649416 Msa0117560:CDS 40.0%
TCACCAACGAAATAGTGTCA+TGG - chr1_3:38649763-38649782 None:intergenic 40.0%
CATCTTCGACAACAATCGAA+TGG + chr1_3:38649906-38649925 Msa0117560:CDS 40.0%
TCACCACTAATGGTACTGTA+GGG - chr1_3:38650084-38650103 None:intergenic 40.0%
GATGATTCTCTCACCACTAA+TGG - chr1_3:38650094-38650113 None:intergenic 40.0%
! CTCTCTGGTTTAAACTCATG+TGG - chr1_3:38650214-38650233 None:intergenic 40.0%
CACATGAGTTTAAACCAGAG+AGG + chr1_3:38650212-38650231 Msa0117560:intron 40.0%
TCTTCACTCATAAACCTCTC+TGG - chr1_3:38650229-38650248 None:intergenic 40.0%
CAGTTCCAAATGGCATAAGT+TGG - chr1_3:38650282-38650301 None:intergenic 40.0%
! CAACTTATGCCATTTGGAAC+TGG + chr1_3:38650280-38650299 Msa0117560:intron 40.0%
!! TGGTGATGGAACAGTTAACA+TGG + chr1_3:38650393-38650412 Msa0117560:intron 40.0%
GGAATAGGGACACATATCAA+AGG - chr1_3:38650454-38650473 None:intergenic 40.0%
ACTCACACCTGATTAGAACA+TGG - chr1_3:38651077-38651096 None:intergenic 40.0%
! TGAGTAAACTTGGTGAGAGA+GGG + chr1_3:38651092-38651111 Msa0117560:intron 40.0%
!!! CGATACTCATTTTGAAACGG+AGG - chr1_3:38651434-38651453 None:intergenic 40.0%
!!! CGACACTAATTTTGAAACGG+AGG + chr1_3:38651675-38651694 Msa0117560:intron 40.0%
!! TGAGGTGAACTTTGATGATG+AGG + chr1_3:38651800-38651819 Msa0117560:intron 40.0%
AGCTATGATTACCTTAGAGG+AGG + chr1_3:38651902-38651921 Msa0117560:intron 40.0%
CAGCTTCAAGTCTTTAAGCA+TGG - chr1_3:38651958-38651977 None:intergenic 40.0%
CATGCTTAAAGACTTGAAGC+TGG + chr1_3:38651956-38651975 Msa0117560:intron 40.0%
ACTTGAAGCTGGTAGATAGA+AGG + chr1_3:38651967-38651986 Msa0117560:intron 40.0%
CTTGAAGCTGGTAGATAGAA+GGG + chr1_3:38651968-38651987 Msa0117560:intron 40.0%
TCACTTCAAGTGAGATTGTC+GGG + chr1_3:38652072-38652091 Msa0117560:intron 40.0%
AGTGTCCATGAAATATCCAC+TGG - chr1_3:38652110-38652129 None:intergenic 40.0%
TTGTATGGCTGTGATTTCAC+TGG + chr1_3:38652195-38652214 Msa0117560:intron 40.0%
ACTGGACGGTAAAAAATGTC+AGG + chr1_3:38652213-38652232 Msa0117560:intron 40.0%
AAATGTCAGGTTCAAGGTCA+AGG + chr1_3:38652226-38652245 Msa0117560:intron 40.0%
!! AGCCTCCATTTTTGTAGGAA+CGG - chr1_3:38652252-38652271 None:intergenic 40.0%
AAACAAAAATCAGCCCTCAC+GGG + chr1_3:38652536-38652555 Msa0117560:intron 40.0%
GATGAATTAGGATAGGACAC+TGG + chr1_3:38652820-38652839 Msa0117560:intron 40.0%
TTAGGATAGGACACTGGAAT+TGG + chr1_3:38652826-38652845 Msa0117560:intron 40.0%
AATGTGCAACCCATGAATTC+TGG - chr1_3:38652868-38652887 None:intergenic 40.0%
GGTCGTTCACTTGTAAAACT+AGG + chr1_3:38652909-38652928 Msa0117560:intron 40.0%
AGGTTATGGGATTGGAGAAT+AGG + chr1_3:38652929-38652948 Msa0117560:intron 40.0%
GGTTATGGGATTGGAGAATA+GGG + chr1_3:38652930-38652949 Msa0117560:intron 40.0%
!! GCATGAGTTTCTACTTTTGC+CGG - chr1_3:38653101-38653120 None:intergenic 40.0%
GGCAAAAGTAGAAACTCATG+CGG + chr1_3:38653100-38653119 Msa0117560:intron 40.0%
GCAAAAGTAGAAACTCATGC+GGG + chr1_3:38653101-38653120 Msa0117560:intron 40.0%
CCTCAAGTATACATCTCACA+AGG - chr1_3:38653411-38653430 None:intergenic 40.0%
CCTTGTGAGATGTATACTTG+AGG + chr1_3:38653408-38653427 Msa0117560:intron 40.0%
!!! TATGAAGGTTTTTCGAGCTC+TGG + chr1_3:38653565-38653584 Msa0117560:intron 40.0%
TAACATCACCGGTGATTTGA+AGG + chr1_3:38653658-38653677 Msa0117560:intron 40.0%
!!! TTTCTCCGGTTTTAGTTTCG+GGG + chr1_3:38653816-38653835 Msa0117560:intron 40.0%
GTGATTATACTTGAGGGTTG+AGG + chr1_3:38654041-38654060 Msa0117560:intron 40.0%
TACTTGAGGGTTGAGGAAAA+AGG + chr1_3:38654048-38654067 Msa0117560:intron 40.0%
CTAAATTGACCTACGTTTGG+GGG - chr1_3:38654185-38654204 None:intergenic 40.0%
CCTAAATTGACCTACGTTTG+GGG - chr1_3:38654186-38654205 None:intergenic 40.0%
GAGTGTGCAACAAATGACAA+TGG - chr1_3:38654356-38654375 None:intergenic 40.0%
TTGTTGCACACTCTCAAACA+CGG + chr1_3:38654363-38654382 Msa0117560:intron 40.0%
GTGTCCAACACACTTCAAAT+AGG - chr1_3:38654539-38654558 None:intergenic 40.0%
AGTGTGTTGGACACCAAATA+TGG + chr1_3:38654545-38654564 Msa0117560:intron 40.0%
TCCAAGGAGAAAGTCTATCA+TGG + chr1_3:38654766-38654785 Msa0117560:intron 40.0%
ACCATGATAGACTTTCTCCT+TGG - chr1_3:38654770-38654789 None:intergenic 40.0%
CTTGTGACAACTTGGAAAAG+AGG - chr1_3:38654956-38654975 None:intergenic 40.0%
! TACACTTTTATTAGGGAGGG+AGG + chr1_3:38655087-38655106 Msa0117560:intron 40.0%
!! CGAGAATGAAAGCACTTCTA+TGG + chr1_3:38655128-38655147 Msa0117560:intron 40.0%
GTCTAAAAGTGGGAACGTTT+AGG + chr1_3:38655420-38655439 Msa0117560:intron 40.0%
!!! GAACGTTTAGGGAGTACTTT+TGG + chr1_3:38655432-38655451 Msa0117560:intron 40.0%
GGTCAAATATGACGTACATC+TGG - chr1_3:38655650-38655669 None:intergenic 40.0%
GATTTGATGCGTGAACACTA+CGG - chr1_3:38656017-38656036 None:intergenic 40.0%
GTAGTGTTCACGCATCAAAT+CGG + chr1_3:38656016-38656035 Msa0117560:intron 40.0%
ACTATGACCTTATGGACCTT+AGG + chr1_3:38656590-38656609 Msa0117560:intron 40.0%
CTATGACCTTATGGACCTTA+GGG + chr1_3:38656591-38656610 Msa0117560:intron 40.0%
TAAAGAGTCCCACGTTAGTT+GGG - chr1_3:38656833-38656852 None:intergenic 40.0%
TTAAAGAGTCCCACGTTAGT+TGG - chr1_3:38656834-38656853 None:intergenic 40.0%
CCACGTGTTATCAGAATTCT+GGG - chr1_3:38656915-38656934 None:intergenic 40.0%
ACCACGTGTTATCAGAATTC+TGG - chr1_3:38656916-38656935 None:intergenic 40.0%
TCTGATAACACGTGGTCTAA+CGG + chr1_3:38656920-38656939 Msa0117560:intron 40.0%
!!! CGTGGTCTAACGGATTTTAA+AGG + chr1_3:38656930-38656949 Msa0117560:intron 40.0%
!!! GGTCTAACGGATTTTAAAGG+AGG + chr1_3:38656933-38656952 Msa0117560:intron 40.0%
ACACCCAGCACTACTAAATT+TGG + chr1_3:38657015-38657034 Msa0117560:intron 40.0%
GCACCAAATTTAGTAGTGCT+GGG - chr1_3:38657021-38657040 None:intergenic 40.0%
TGTGGTACAACTGATCTTTG+AGG + chr1_3:38657086-38657105 Msa0117560:intron 40.0%
! CTGTTTTGTGGAGTTGTGTT+AGG - chr1_3:38657146-38657165 None:intergenic 40.0%
! CCTATGTTAATGGATGCATG+TGG - chr1_3:38657475-38657494 None:intergenic 40.0%
CCACATGCATCCATTAACAT+AGG + chr1_3:38657472-38657491 Msa0117560:intron 40.0%
TAGTATGGCTCGAATTGCAA+TGG - chr1_3:38657574-38657593 None:intergenic 40.0%
GGACTGGAAATTACTACACA+AGG - chr1_3:38657759-38657778 None:intergenic 40.0%
AGAAACTCCTTGACAATGTC+CGG - chr1_3:38657780-38657799 None:intergenic 40.0%
TTGCACCTTATGGTGAATAC+TGG + chr1_3:38657883-38657902 Msa0117560:intron 40.0%
ATATGCATGTCTGAGCTTCT+TGG + chr1_3:38657921-38657940 Msa0117560:CDS 40.0%
! TGCTGAAAATGATAGCGATG+TGG + chr1_3:38658109-38658128 Msa0117560:CDS 40.0%
ATAGCGATGTGGAAGACATT+AGG + chr1_3:38658120-38658139 Msa0117560:CDS 40.0%
TGTGGAAGACATTAGGAAGA+TGG + chr1_3:38658127-38658146 Msa0117560:CDS 40.0%
CAAGATAGTGTAGAGCTTTC+AGG + chr1_3:38658152-38658171 Msa0117560:intron 40.0%
CAAAAGGCTTAAAGGGGTTA+TGG + chr1_3:38658235-38658254 Msa0117560:CDS 40.0%
GTTTGACACATTGATGGAGA+GGG + chr1_3:38658262-38658281 Msa0117560:CDS 40.0%
ATTGATGGAGAGGGTGATAA+GGG + chr1_3:38658271-38658290 Msa0117560:CDS 40.0%
TAAGGGATCATCAAGAGGAA+AGG + chr1_3:38658288-38658307 Msa0117560:CDS 40.0%
ATCCATAAAAGGAGCAGCTA+AGG + chr1_3:38658509-38658528 Msa0117560:intron 40.0%
! TACCTTAGCTGCTCCTTTTA+TGG - chr1_3:38658514-38658533 None:intergenic 40.0%
ATCTGCGACAACAATCGAAT+GGG + chr1_3:38658618-38658637 Msa0117560:intron 40.0%
TTGCTTTCTCCATCACATGT+GGG - chr1_3:38658666-38658685 None:intergenic 40.0%
ATATGGAAGATTGGGGAGAT+CGG - chr1_3:38658737-38658756 None:intergenic 40.0%
CTCGCAAATATGGAAGATTG+GGG - chr1_3:38658744-38658763 None:intergenic 40.0%
GCTCGCAAATATGGAAGATT+GGG - chr1_3:38658745-38658764 None:intergenic 40.0%
AGCTCGCAAATATGGAAGAT+TGG - chr1_3:38658746-38658765 None:intergenic 40.0%
TTGAGTGTAGCTCGCAAATA+TGG - chr1_3:38658754-38658773 None:intergenic 40.0%
! GTAATTTGTGGTCAATGGGA+AGG + chr1_3:38658878-38658897 Msa0117560:intron 40.0%
TCTTCACTCATAAACCTCTC+TGG - chr1_3:38650229-38650248 None:intergenic 40.0%
GATCTTCTTCCAGTTCCAAA+TGG - chr1_3:38659003-38659022 None:intergenic 40.0%
ATCATGGCAGCAAGATTTGT+CGG - chr1_3:38659060-38659079 None:intergenic 40.0%
!! CAGTGTTTTGAATGGAAGGT+TGG + chr1_3:38659081-38659100 Msa0117560:intron 40.0%
!! TGTTTTGAATGGAAGGTTGG+TGG + chr1_3:38659084-38659103 Msa0117560:intron 40.0%
ATAGGTAAAGCAAGAGGGCT+TGG - chr1_3:38648647-38648666 None:intergenic 45.0%
TTGATCAATTCCGTCCGTTG+AGG + chr1_3:38648972-38648991 Msa0117560:CDS 45.0%
TTTCTTGTTGCCTCAACGGA+CGG - chr1_3:38648985-38649004 None:intergenic 45.0%
ACGGTTTCTTGTTGCCTCAA+CGG - chr1_3:38648989-38649008 None:intergenic 45.0%
CAGAAGTCTCAGTAACCTCA+CGG - chr1_3:38649008-38649027 None:intergenic 45.0%
TGAGACTTCTGCAGCAGAAA+GGG + chr1_3:38649017-38649036 Msa0117560:intron 45.0%
! CTGCATCCCTTTAAGCCTTT+TGG - chr1_3:38649254-38649273 None:intergenic 45.0%
GGCTTAAAGGGATGCAGAAA+AGG + chr1_3:38649257-38649276 Msa0117560:CDS 45.0%
! CAATGATGGAGATGGCGATA+AGG + chr1_3:38649287-38649306 Msa0117560:CDS 45.0%
! ACTCTCTTGTTAGCGGATGA+TGG + chr1_3:38649696-38649715 Msa0117560:intron 45.0%
! GATGATGGTATGTGCCTCAT+TGG + chr1_3:38649711-38649730 Msa0117560:intron 45.0%
TTGCTTTCGCCATCACATGT+GGG - chr1_3:38649955-38649974 None:intergenic 45.0%
! ACATGTGATGGCGAAAGCAA+GGG + chr1_3:38649955-38649974 Msa0117560:CDS 45.0%
TCACCCTACAGTACCATTAG+TGG + chr1_3:38650078-38650097 Msa0117560:intron 45.0%
CTCACCACTAATGGTACTGT+AGG - chr1_3:38650085-38650104 None:intergenic 45.0%
TTTGTGGGTTCGAGATTCCA+AGG + chr1_3:38650128-38650147 Msa0117560:intron 45.0%
TGGGTAGGGACCCAAAATTA+TGG + chr1_3:38650182-38650201 Msa0117560:intron 45.0%
GGGTAGGGACCCAAAATTAT+GGG + chr1_3:38650183-38650202 Msa0117560:intron 45.0%
CCTCTTCTTCCAGTTCCAAA+TGG - chr1_3:38650292-38650311 None:intergenic 45.0%
! CCATTTGGAACTGGAAGAAG+AGG + chr1_3:38650289-38650308 Msa0117560:intron 45.0%
! GAAGTGCTAATGAAGCACCA+GGG - chr1_3:38650318-38650337 None:intergenic 45.0%
! TGAAGTGCTAATGAAGCACC+AGG - chr1_3:38650319-38650338 None:intergenic 45.0%
!! GAATGGAAAGTTGGTGGTGA+TGG + chr1_3:38650379-38650398 Msa0117560:intron 45.0%
CATATCAAAGGATGAGCCCT+TGG - chr1_3:38650442-38650461 None:intergenic 45.0%
! AAACCAGTAGTTGGTGTGAG+AGG + chr1_3:38651022-38651041 Msa0117560:intron 45.0%
TTTCCTCTCACACCAACTAC+TGG - chr1_3:38651028-38651047 None:intergenic 45.0%
! AGTTGGTGTGAGAGGAAACT+TGG + chr1_3:38651030-38651049 Msa0117560:intron 45.0%
GTTGGTGTGAGAGGAAACTT+GGG + chr1_3:38651031-38651050 Msa0117560:intron 45.0%
! GTGAGTAAACTTGGTGAGAG+AGG + chr1_3:38651091-38651110 Msa0117560:intron 45.0%
! AACGGAGGGAGTGTATGTTT+AGG + chr1_3:38651690-38651709 Msa0117560:intron 45.0%
AAGCTGGTAGATAGAAGGGA+TGG + chr1_3:38651972-38651991 Msa0117560:intron 45.0%
CTCCTCCAGTGGATATTTCA+TGG + chr1_3:38652102-38652121 Msa0117560:intron 45.0%
GTCCATGAAATATCCACTGG+AGG - chr1_3:38652107-38652126 None:intergenic 45.0%
ATGGCTGTGATTTCACTGGA+CGG + chr1_3:38652199-38652218 Msa0117560:intron 45.0%
CAAGGCCGTTCCTACAAAAA+TGG + chr1_3:38652244-38652263 Msa0117560:intron 45.0%
!! AGTCGAGCCTCCATTTTTGT+AGG - chr1_3:38652257-38652276 None:intergenic 45.0%
TAGAGTTGTTTGTACCTCCC+TGG + chr1_3:38652671-38652690 Msa0117560:intron 45.0%
TGGAACACTCACCTTGAACA+GGG - chr1_3:38652703-38652722 None:intergenic 45.0%
ATGGAACACTCACCTTGAAC+AGG - chr1_3:38652704-38652723 None:intergenic 45.0%
TGGAATTGGCCAAGAGGTAA+GGG + chr1_3:38652840-38652859 Msa0117560:intron 45.0%
GTAAGGGGACCAGAATTCAT+GGG + chr1_3:38652856-38652875 Msa0117560:intron 45.0%
!! TCACTTGGTTCTTTTGGGTC+CGG + chr1_3:38653079-38653098 Msa0117560:intron 45.0%
TTTGTTGCTGTGTTCCAGCA+TGG - chr1_3:38653353-38653372 None:intergenic 45.0%
GACTTCACCCCAGAAATTTC+TGG - chr1_3:38653445-38653464 None:intergenic 45.0%
! TTCGTGGTTGATGCATGGTA+GGG - chr1_3:38653748-38653767 None:intergenic 45.0%
! TTTCGTGGTTGATGCATGGT+AGG - chr1_3:38653749-38653768 None:intergenic 45.0%
!! CTGTTTTCGTGGTTGATGCA+TGG - chr1_3:38653753-38653772 None:intergenic 45.0%
! CACGAAAACAGAGACTAGCT+CGG + chr1_3:38653762-38653781 Msa0117560:intron 45.0%
! ACGAAAACAGAGACTAGCTC+GGG + chr1_3:38653763-38653782 Msa0117560:intron 45.0%
CAGAACCCCGAAACTAAAAC+CGG - chr1_3:38653824-38653843 None:intergenic 45.0%
CCCCAAACGTAGGTCAATTT+AGG + chr1_3:38654183-38654202 Msa0117560:intron 45.0%
!! GGAAAAGAGGCATTCTTGCA+TGG - chr1_3:38654943-38654962 None:intergenic 45.0%
GGTGATTTGAGTATGTCTCG+AGG + chr1_3:38655149-38655168 Msa0117560:intron 45.0%
AACATCTCTGGGTCATCATG+AGG + chr1_3:38655318-38655337 Msa0117560:intron 45.0%
ACACACCACACATTGTTCGT+TGG - chr1_3:38656308-38656327 None:intergenic 45.0%
TGGCCATGACTATGACCTTA+TGG + chr1_3:38656582-38656601 Msa0117560:intron 45.0%
GGTCCATAAGGTCATAGTCA+TGG - chr1_3:38656588-38656607 None:intergenic 45.0%
TGTAGTCCCTAAGGTCCATA+AGG - chr1_3:38656600-38656619 None:intergenic 45.0%
TTGATCTTTCCACTCGCATG+TGG + chr1_3:38656684-38656703 Msa0117560:intron 45.0%
ATACCATCTCCCAACTAACG+TGG + chr1_3:38656821-38656840 Msa0117560:intron 45.0%
TACCATCTCCCAACTAACGT+GGG + chr1_3:38656822-38656841 Msa0117560:intron 45.0%
CCCAGAATTCTGATAACACG+TGG + chr1_3:38656912-38656931 Msa0117560:intron 45.0%
! TAGTAGTGCTGGGTGTAAGA+GGG - chr1_3:38657011-38657030 None:intergenic 45.0%
! TTAGTAGTGCTGGGTGTAAG+AGG - chr1_3:38657012-38657031 None:intergenic 45.0%
CGCACCAAATTTAGTAGTGC+TGG - chr1_3:38657022-38657041 None:intergenic 45.0%
! GGTACAACTGATCTTTGAGG+AGG + chr1_3:38657089-38657108 Msa0117560:intron 45.0%
! TTAGACCAACTGATAACGCG+TGG + chr1_3:38657358-38657377 Msa0117560:intron 45.0%
! TAGACCAACTGATAACGCGT+GGG + chr1_3:38657359-38657378 Msa0117560:intron 45.0%
GGGGAGGTAACTTAGCTATA+AGG - chr1_3:38657671-38657690 None:intergenic 45.0%
CAAGGGAAGAAACTTGTCGA+GGG - chr1_3:38657955-38657974 None:intergenic 45.0%
TCAAGGGAAGAAACTTGTCG+AGG - chr1_3:38657956-38657975 None:intergenic 45.0%
TCGACAAGTTTCTTCCCTTG+AGG + chr1_3:38657955-38657974 Msa0117560:CDS 45.0%
TGAGACTTCTGCAGACGAAA+GGG + chr1_3:38658000-38658019 Msa0117560:CDS 45.0%
ATAGTGTAGAGCTTTCAGGG+AGG + chr1_3:38658156-38658175 Msa0117560:intron 45.0%
GGAGAGGTTTGACACATTGA+TGG + chr1_3:38658256-38658275 Msa0117560:CDS 45.0%
GGTTTGACACATTGATGGAG+AGG + chr1_3:38658261-38658280 Msa0117560:CDS 45.0%
CATTGATGGAGAGGGTGATA+AGG + chr1_3:38658270-38658289 Msa0117560:CDS 45.0%
GGTGATAAGGGATCATCAAG+AGG + chr1_3:38658283-38658302 Msa0117560:CDS 45.0%
TCGTCAATCATGGAGGATGT+TGG - chr1_3:38658453-38658472 None:intergenic 45.0%
ATGCAGGACATATTCATGGC+AGG + chr1_3:38658586-38658605 Msa0117560:intron 45.0%
GATTGTTGTCGCAGATGTCT+CGG - chr1_3:38658614-38658633 None:intergenic 45.0%
CATCTGCGACAACAATCGAA+TGG + chr1_3:38658617-38658636 Msa0117560:intron 45.0%
CTTGCTTTCTCCATCACATG+TGG - chr1_3:38658667-38658686 None:intergenic 45.0%
GATGATTGTCTCACCACTAC+CGG - chr1_3:38658805-38658824 None:intergenic 45.0%
! GAAGTGCTAATGAAGCACCA+GGG - chr1_3:38650318-38650337 None:intergenic 45.0%
! TGAAGTGCTAATGAAGCACC+AGG - chr1_3:38650319-38650338 None:intergenic 45.0%
TGGTGCTTCATTAGCACTTC+AGG + chr1_3:38650318-38650337 Msa0117560:intron 45.0%
!! GAATGGAAGGTTGGTGGTAA+TGG + chr1_3:38659090-38659109 Msa0117560:intron 45.0%
CAAATCAAAGGATGAGCCCT+TGG - chr1_3:38659153-38659172 None:intergenic 45.0%
GGAATGGGGACACAAATCAA+AGG - chr1_3:38659165-38659184 None:intergenic 45.0%
TGCATGTCAGAGCTTCTTGG+TGG + chr1_3:38648941-38648960 Msa0117560:CDS 50.0%
TGAGGCAACAAGAAACCGTG+AGG + chr1_3:38648990-38649009 Msa0117560:intron 50.0%
CTGAGACTTCTGCAGCAGAA+AGG + chr1_3:38649016-38649035 Msa0117560:intron 50.0%
GAGACTTCTGCAGCAGAAAG+GGG + chr1_3:38649018-38649037 Msa0117560:intron 50.0%
ACTGACATCAACAGCTTCGC+CGG - chr1_3:38649047-38649066 None:intergenic 50.0%
TAAGGGACCGTCAAGAGGAA+AGG + chr1_3:38649305-38649324 Msa0117560:CDS 50.0%
GCGCCATGACACTATTTCGT+TGG + chr1_3:38649757-38649776 Msa0117560:intron 50.0%
CTTGCTTTCGCCATCACATG+TGG - chr1_3:38649956-38649975 None:intergenic 50.0%
! CACATGTGATGGCGAAAGCA+AGG + chr1_3:38649954-38649973 Msa0117560:CDS 50.0%
AACCTTCCACAACCCTTCCA+AGG + chr1_3:38650422-38650441 Msa0117560:CDS 50.0%
ACCTTCCACAACCCTTCCAA+GGG + chr1_3:38650423-38650442 Msa0117560:CDS 50.0%
CAAAGGATGAGCCCTTGGAA+GGG - chr1_3:38650437-38650456 None:intergenic 50.0%
TCAAAGGATGAGCCCTTGGA+AGG - chr1_3:38650438-38650457 None:intergenic 50.0%
TACCTTAGAGGAGGTCCACT+CGG + chr1_3:38651911-38651930 Msa0117560:intron 50.0%
GGCCGTTCCTACAAAAATGG+AGG + chr1_3:38652247-38652266 Msa0117560:intron 50.0%
TTTGGACCCCAAAATTGGGG+AGG + chr1_3:38652638-38652657 Msa0117560:intron 50.0%
CTGGAATTGGCCAAGAGGTA+AGG + chr1_3:38652839-38652858 Msa0117560:intron 50.0%
GGAATTGGCCAAGAGGTAAG+GGG + chr1_3:38652841-38652860 Msa0117560:intron 50.0%
ATTCTGGTCCCCTTACCTCT+TGG - chr1_3:38652852-38652871 None:intergenic 50.0%
GGTAAGGGGACCAGAATTCA+TGG + chr1_3:38652855-38652874 Msa0117560:intron 50.0%
! TAAGAGGCATAGGACCATGC+TGG + chr1_3:38653336-38653355 Msa0117560:intron 50.0%
TCACCGGTGATTTGAAGGCA+AGG + chr1_3:38653663-38653682 Msa0117560:intron 50.0%
CCACCTTGCCTTCAAATCAC+CGG - chr1_3:38653669-38653688 None:intergenic 50.0%
ATGGTAGGGTTGTTTGCACG+TGG - chr1_3:38653734-38653753 None:intergenic 50.0%
!! CGAGCTAGTCTCTGTTTTCG+TGG - chr1_3:38653764-38653783 None:intergenic 50.0%
! CGAAAACAGAGACTAGCTCG+GGG + chr1_3:38653764-38653783 Msa0117560:intron 50.0%
! CGGGGCAAACATTTTCTACC+AGG + chr1_3:38653782-38653801 Msa0117560:intron 50.0%
! AGGCGCCCACTAATTTTCTC+CGG + chr1_3:38653802-38653821 Msa0117560:intron 50.0%
!!! CGGTTTTAGTTTCGGGGTTC+TGG + chr1_3:38653822-38653841 Msa0117560:intron 50.0%
CTACTATCTCCCCCAAACGT+AGG + chr1_3:38654173-38654192 Msa0117560:intron 50.0%
GCGATCTGTGCAACATCTCT+GGG + chr1_3:38655307-38655326 Msa0117560:intron 50.0%
GATCAATGGCAAGGTAGCAG+AGG - chr1_3:38655707-38655726 None:intergenic 50.0%
CAATAGTGCTTGACACGAGG+GGG - chr1_3:38656861-38656880 None:intergenic 50.0%
CCAATAGTGCTTGACACGAG+GGG - chr1_3:38656862-38656881 None:intergenic 50.0%
CCCAATAGTGCTTGACACGA+GGG - chr1_3:38656863-38656882 None:intergenic 50.0%
CCCTCGTGTCAAGCACTATT+GGG + chr1_3:38656860-38656879 Msa0117560:intron 50.0%
ACCCAATAGTGCTTGACACG+AGG - chr1_3:38656864-38656883 None:intergenic 50.0%
CTCTGATACCCTCTTCGAAG+TGG + chr1_3:38656956-38656975 Msa0117560:intron 50.0%
TGATACCCTCTTCGAAGTGG+TGG + chr1_3:38656959-38656978 Msa0117560:intron 50.0%
CTCAACCACCACTTCGAAGA+GGG - chr1_3:38656967-38656986 None:intergenic 50.0%
ACTCAACCACCACTTCGAAG+AGG - chr1_3:38656968-38656987 None:intergenic 50.0%
! AGTAGTGCTGGGTGTAAGAG+GGG - chr1_3:38657010-38657029 None:intergenic 50.0%
! AGACCAACTGATAACGCGTG+GGG + chr1_3:38657360-38657379 Msa0117560:intron 50.0%
TTTCCCCACGCGTTATCAGT+TGG - chr1_3:38657366-38657385 None:intergenic 50.0%
TGTCCTATGATAGGCAGAGC+AGG - chr1_3:38657642-38657661 None:intergenic 50.0%
TTCCAGTCCGGACATTGTCA+AGG + chr1_3:38657770-38657789 Msa0117560:intron 50.0%
TGCATGTCTGAGCTTCTTGG+TGG + chr1_3:38657924-38657943 Msa0117560:CDS 50.0%
CTGAGACTTCTGCAGACGAA+AGG + chr1_3:38657999-38658018 Msa0117560:CDS 50.0%
GAGACTTCTGCAGACGAAAG+GGG + chr1_3:38658001-38658020 Msa0117560:CDS 50.0%
GGCTTAAAGGGGTTATGGAG+AGG + chr1_3:38658240-38658259 Msa0117560:CDS 50.0%
AAGACTTCACCCTACGGTAC+CGG + chr1_3:38658783-38658802 Msa0117560:intron 50.0%
TGGGAAGGGACCCAAAATTG+TGG + chr1_3:38658893-38658912 Msa0117560:intron 50.0%
GGGAAGGGACCCAAAATTGT+GGG + chr1_3:38658894-38658913 Msa0117560:intron 50.0%
ACTGGAAGAAGATCTTGCCC+TGG + chr1_3:38659009-38659028 Msa0117560:intron 50.0%
TCAAAGGATGAGCCCTTGGA+AGG - chr1_3:38650438-38650457 None:intergenic 50.0%
GGTAAAGCAAGAGGGCTTGG+TGG - chr1_3:38648644-38648663 None:intergenic 55.0%
GGCGAAGCTGTTGATGTCAG+TGG + chr1_3:38649046-38649065 Msa0117560:CDS 55.0%
GCACCAGTCACTGCACACAT+AGG + chr1_3:38649735-38649754 Msa0117560:intron 55.0%
ACTGGAAGAAGAGGTTGCCC+TGG + chr1_3:38650298-38650317 Msa0117560:intron 55.0%
ATGAGCCCTTGGAAGGGTTG+TGG - chr1_3:38650431-38650450 None:intergenic 55.0%
CCATGATCCTAATCGCCGAG+TGG - chr1_3:38651929-38651948 None:intergenic 55.0%
CCACTCGGCGATTAGGATCA+TGG + chr1_3:38651926-38651945 Msa0117560:intron 55.0%
AGCCCTCACGGGAGTTGAAT+CGG + chr1_3:38652547-38652566 Msa0117560:intron 55.0%
CTCCGATTCAACTCCCGTGA+GGG - chr1_3:38652552-38652571 None:intergenic 55.0%
ACTCCGATTCAACTCCCGTG+AGG - chr1_3:38652553-38652572 None:intergenic 55.0%
TCACGGGAGTTGAATCGGAG+TGG + chr1_3:38652552-38652571 Msa0117560:intron 55.0%
! AGCTGGGCCTCCCCAATTTT+GGG - chr1_3:38652648-38652667 None:intergenic 55.0%
CTTGAACAGGGCTGTCTCCA+GGG - chr1_3:38652691-38652710 None:intergenic 55.0%
GGACACTGGAATTGGCCAAG+AGG + chr1_3:38652834-38652853 Msa0117560:intron 55.0%
CCGGTGATTTGAAGGCAAGG+TGG + chr1_3:38653666-38653685 Msa0117560:intron 55.0%
! GGAGAAAATTAGTGGGCGCC+TGG - chr1_3:38653803-38653822 None:intergenic 55.0%
GGCGATCTGTGCAACATCTC+TGG + chr1_3:38655306-38655325 Msa0117560:intron 55.0%
GAGGCGACTTCTCTATCGCA+AGG + chr1_3:38655337-38655356 Msa0117560:intron 55.0%
CTGGCAAAACCACATGCGAG+TGG - chr1_3:38656696-38656715 None:intergenic 55.0%
GTCCCACGTTAGTTGGGAGA+TGG - chr1_3:38656827-38656846 None:intergenic 55.0%
CCCCTCGTGTCAAGCACTAT+TGG + chr1_3:38656859-38656878 Msa0117560:intron 55.0%
! ATAGGCAGAGCAGGAGGTGT+GGG - chr1_3:38657633-38657652 None:intergenic 55.0%
CCTATGATAGGCAGAGCAGG+AGG - chr1_3:38657639-38657658 None:intergenic 55.0%
CCTCCTGCTCTGCCTATCAT+AGG + chr1_3:38657636-38657655 Msa0117560:CDS 55.0%
CTCCTTGACAATGTCCGGAC+TGG - chr1_3:38657775-38657794 None:intergenic 55.0%
GCCAACATTAACAGCCTCGC+GGG - chr1_3:38658030-38658049 None:intergenic 55.0%
CGCCAACATTAACAGCCTCG+CGG - chr1_3:38658031-38658050 None:intergenic 55.0%
CGCGAGGCTGTTAATGTTGG+CGG + chr1_3:38658029-38658048 Msa0117560:CDS 55.0%
TCACCACTACCGGTACCGTA+GGG - chr1_3:38658795-38658814 None:intergenic 55.0%
AAGCAGCTACGAGCCTTCCA+AGG + chr1_3:38659133-38659152 Msa0117560:CDS 55.0%
AGCAGCTACGAGCCTTCCAA+GGG + chr1_3:38659134-38659153 Msa0117560:CDS 55.0%
CTGCAGCAGAAAGGGGAAGC+CGG + chr1_3:38649025-38649044 Msa0117560:intron 60.0%
GGCGATAAGGGACCGTCAAG+AGG + chr1_3:38649300-38649319 Msa0117560:CDS 60.0%
CAGTGACTGGTGCGCCAATG+AGG - chr1_3:38649728-38649747 None:intergenic 60.0%
GCGCCTATGTGTGCAGTGAC+TGG - chr1_3:38649741-38649760 None:intergenic 60.0%
GCCCTTGGAAGGGTTGTGGA+AGG - chr1_3:38650427-38650446 None:intergenic 60.0%
AGGAGGTCCACTCGGCGATT+AGG + chr1_3:38651919-38651938 Msa0117560:intron 60.0%
CGGGAACAGATCTCCTCCAG+TGG + chr1_3:38652091-38652110 Msa0117560:intron 60.0%
! GCTGGGCCTCCCCAATTTTG+GGG - chr1_3:38652647-38652666 None:intergenic 60.0%
! GAGCTGGGCCTCCCCAATTT+TGG - chr1_3:38652649-38652668 None:intergenic 60.0%
CCTTGAACAGGGCTGTCTCC+AGG - chr1_3:38652692-38652711 None:intergenic 60.0%
CCTGGAGACAGCCCTGTTCA+AGG + chr1_3:38652689-38652708 Msa0117560:intron 60.0%
! TAGGCAGAGCAGGAGGTGTG+GGG - chr1_3:38657632-38657651 None:intergenic 60.0%
GATAGGCAGAGCAGGAGGTG+TGG - chr1_3:38657634-38657653 None:intergenic 60.0%
GCCCGCGAGGCTGTTAATGT+TGG + chr1_3:38658026-38658045 Msa0117560:CDS 60.0%
!! TCACCCTACGGTACCGGTAG+TGG + chr1_3:38658789-38658808 Msa0117560:intron 60.0%
CTCACCACTACCGGTACCGT+AGG - chr1_3:38658796-38658815 None:intergenic 60.0%
CGCCGAGTGGACCTCCTCTA+AGG - chr1_3:38651916-38651935 None:intergenic 65.0%
GAACAGGGCTGTCTCCAGGG+AGG - chr1_3:38652688-38652707 None:intergenic 65.0%
!! GGAGGTGTGGGGGGAGTACT+AGG - chr1_3:38657621-38657640 None:intergenic 65.0%
! AGGCAGAGCAGGAGGTGTGG+GGG - chr1_3:38657631-38657650 None:intergenic 65.0%
! GGCAGAGCAGGAGGTGTGGG+GGG - chr1_3:38657630-38657649 None:intergenic 70.0%
GACGAAAGGGGAAGCCCGCG+AGG + chr1_3:38658013-38658032 Msa0117560:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 38648536 38659215 38648536 ID=Msa0117560;Name=Msa0117560
chr1_3 mRNA 38648536 38659215 38648536 ID=Msa0117560-mRNA-1;Parent=Msa0117560;Name=Msa0117560-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0.22|0.1|10|0|609
chr1_3 exon 38648536 38648781 38648536 ID=Msa0117560-mRNA-1:exon:12062;Parent=Msa0117560-mRNA-1
chr1_3 exon 38648809 38649006 38648809 ID=Msa0117560-mRNA-1:exon:12063;Parent=Msa0117560-mRNA-1
chr1_3 exon 38649031 38649203 38649031 ID=Msa0117560-mRNA-1:exon:12064;Parent=Msa0117560-mRNA-1
chr1_3 exon 38649240 38649459 38649240 ID=Msa0117560-mRNA-1:exon:12065;Parent=Msa0117560-mRNA-1
chr1_3 exon 38649881 38650004 38649881 ID=Msa0117560-mRNA-1:exon:12066;Parent=Msa0117560-mRNA-1
chr1_3 exon 38650407 38650475 38650407 ID=Msa0117560-mRNA-1:exon:12067;Parent=Msa0117560-mRNA-1
chr1_3 exon 38657547 38657764 38657547 ID=Msa0117560-mRNA-1:exon:12068;Parent=Msa0117560-mRNA-1
chr1_3 exon 38657909 38658148 38657909 ID=Msa0117560-mRNA-1:exon:12069;Parent=Msa0117560-mRNA-1
chr1_3 exon 38658212 38658436 38658212 ID=Msa0117560-mRNA-1:exon:12070;Parent=Msa0117560-mRNA-1
chr1_3 exon 38659099 38659215 38659099 ID=Msa0117560-mRNA-1:exon:12071;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38648536 38648781 38648536 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38648809 38649006 38648809 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38649031 38649203 38649031 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38649240 38649459 38649240 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38649881 38650004 38649881 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38650407 38650475 38650407 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38657547 38657764 38657547 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38657909 38658148 38657909 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38658212 38658436 38658212 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
chr1_3 CDS 38659099 38659215 38659099 ID=Msa0117560-mRNA-1:cds;Parent=Msa0117560-mRNA-1
Gene Sequence

>Msa0117560

ATGGCTGAAATGCAATACTATATACAACTTTTTTTAGTTTTGGTAATATCCACCATTGCAATTCAAACCCTACTTACTAGAAAGAAGAACAAGAAACATCTTACTCCACCAAGCCCTCTTGCTTTACCTATATTTGGACATTTTCACCTTATGTCTAAGTTACTACCAGCTCACCAAAGTTTTCACAAGCTTTCAATTCAATATGGACCCATAATGAAACTCTTTCTAGGCTCTGTGCCTTGTATAGAGTTTCTTAAAACCCATGAAATTTTCTTCTCGAATCGCTTAATAAACTATGCAATTGACTACTTATCATATGGCTCACAGGATTTCATGTTTGCACCTTATGGTGAATATTGGAAGTTCATGAAAAAGATATGCATGTCAGAGCTTCTTGGTGGAAGAACTATTGATCAATTCCGTCCGTTGAGGCAACAAGAAACCCAGAAAGGGGAAGCCGGCGAAGCTGTTGATGTCAGTGGCATGCTCTTGAATCTCACCAATAGAATCATAACAAGGATGACCATGAGTAAAACTTTTAATGAAAATGATAGTAATGTTGAAGACCTTAGGAACATGGTTCAAGATTTTTCAGAACTTGCAGGGAAGTTTAGTATGTATAAAATTTCCAAAAGGCTTAAAGGGATGCAGAAAAGGATGGAAACAATGATGGAGATGGCGATAAGGGACCGTCAAGAGGAAAGGAAGCAAATAAAGGAAAACAATGAAGGTTCTCATGTTAGGGATCTTCTTGATATTTTGTTGGAAATTCATGAGAACAAGAACACTGAGATTGGGATAAAGTTAAACAAAGAGAATGTCACGAGTTTTATCGTTGACATATTTTTAGCAGGAACAGACACATCTTCGACAACAATCGAATGGGCTCTAGCAGAGTTAATAAACAACCCACATGTGATGGCGAAAGCAAGGGAAGAGATTGATTCAGTAATAGGAAAGATTAACATGGAAGAGAAACCTTCCACAACCCTTCCAAGGGCTCATCCTTTGATATGTGTCCCTATTCCTCTTTTATTCGTTTGGCTACTCTCTACCATTGCAATTCGAGCCATACTAACTAGAAAGAAGAACAAGAATCATCCTAGTACTCCCCCCACACCTCCTGCTCTGCCTATCATAGGACATTTTCACCTTATAGCTAAGTTACCTCCCCATCAAAGTTTTCATAAGCTTTCAATTCGTTATGGACCCATAATGCAACTTTTCATTGGCTCTATACCTTGTGTATTTATCAAAAAGATATGCATGTCTGAGCTTCTTGGTGGCAGAACCCTCGACAAGTTTCTTCCCTTGAGGCAAAAAGAAACTATGAGGTTTCTGAGACTTCTGCAGACGAAAGGGGAAGCCCGCGAGGCTGTTAATGTTGGCGGCGAGCTCTTGAATCTCACCAACAGAATCATCACAAGTATGGCAATGAGTAAAACATGTGCTGAAAATGATAGCGATGTGGAAGACATTAGGAAGATGAATTGGGATATGCAGGGGTTTAACAAAAGGCTTAAAGGGGTTATGGAGAGGTTTGACACATTGATGGAGAGGGTGATAAGGGATCATCAAGAGGAAAGGAAGAAAAGGAAAGAAAATGGTGAAGGTGCTCATGTTAGAGATCTACTTGATATTTTGTTGGAAATGCATGAGAATGAGAACACCGAAATAAAATTGACAAGAGAGAATGTCAAAGCTTTCATCTTGGTTGGTGGTAATGGAACAGTTAACATGGATGAGAAAGCAGCTACGAGCCTTCCAAGGGCTCATCCTTTGATTTGTGTCCCCATTCCTCGTTTTAATTGTTTTCCTTTTGGTGAGTAG
Protein sequence

>Msa0117560

MAEMQYYIQLFLVLVISTIAIQTLLTRKKNKKHLTPPSPLALPIFGHFHLMSKLLPAHQSFHKLSIQYGPIMKLFLGSVPCIEFLKTHEIFFSNRLINYAIDYLSYGSQDFMFAPYGEYWKFMKKICMSELLGGRTIDQFRPLRQQETQKGEAGEAVDVSGMLLNLTNRIITRMTMSKTFNENDSNVEDLRNMVQDFSELAGKFSMYKISKRLKGMQKRMETMMEMAIRDRQEERKQIKENNEGSHVRDLLDILLEIHENKNTEIGIKLNKENVTSFIVDIFLAGTDTSSTTIEWALAELINNPHVMAKAREEIDSVIGKINMEEKPSTTLPRAHPLICVPIPLLFVWLLSTIAIRAILTRKKNKNHPSTPPTPPALPIIGHFHLIAKLPPHQSFHKLSIRYGPIMQLFIGSIPCVFIKKICMSELLGGRTLDKFLPLRQKETMRFLRLLQTKGEAREAVNVGGELLNLTNRIITSMAMSKTCAENDSDVEDIRKMNWDMQGFNKRLKGVMERFDTLMERVIRDHQEERKKRKENGEGAHVRDLLDILLEMHENENTEIKLTRENVKAFILVGGNGTVNMDEKAATSLPRAHPLICVPIPRFNCFPFGE*