AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0125710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125710 MtrunA17_Chr5g0443891 91.801 2110 114 7 1 2053 1 2108 0.0 3734
Msa0125710 MtrunA17_Chr5g0443841 43.590 117 55 5 1542 1653 36 146 3.23e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125710 AT3G06530.4 44.663 1527 721 38 626 2057 713 2210 0.0 1093
Msa0125710 AT3G06530.4 48.844 692 322 13 1 665 1 687 1.64e-177 597
Msa0125710 AT3G06530.5 44.663 1527 721 38 626 2057 711 2208 0.0 1093
Msa0125710 AT3G06530.5 49.130 690 321 12 1 665 1 685 4.97e-179 601
Msa0125710 AT3G06530.1 44.891 1517 721 38 626 2057 711 2197 0.0 1091
Msa0125710 AT3G06530.1 49.130 690 321 12 1 665 1 685 8.59e-179 600
Msa0125710 AT3G06530.3 44.591 1516 716 39 626 2057 713 2188 0.0 1074
Msa0125710 AT3G06530.3 48.844 692 322 13 1 665 1 687 1.24e-177 597
Msa0125710 AT3G06530.2 44.364 1526 716 39 626 2057 713 2199 0.0 1073
Msa0125710 AT3G06530.2 48.844 692 322 13 1 665 1 687 1.54e-177 597

Find 397 sgRNAs with CRISPR-Local

Find 1121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTGTTTGAAAATTTC+TGG 0.082321 1_3:+54269566 None:intergenic
ATTGATATTCTTCCAGTTAT+TGG 0.102959 1_3:-54266859 Msa0125710:CDS
TACAACAGGGTTCCAGTTTC+TGG 0.138676 1_3:-54270887 Msa0125710:intron
AGAAATACTTGAGTTCATTT+TGG 0.152846 1_3:-54269902 Msa0125710:CDS
ATTATCACCTGCAGATAATT+AGG 0.158360 1_3:+54276841 None:intergenic
TGTTGACCAGTCAATGTTTC+TGG 0.167580 1_3:-54266059 Msa0125710:CDS
CTTCTGTGCTCAACAATTTC+AGG 0.172948 1_3:+54266419 None:intergenic
AATGCCACCTTTCCTTTAAA+TGG 0.183419 1_3:+54262109 None:intergenic
TTGGAAGTGTGTCAACATTT+TGG 0.188777 1_3:+54277076 None:intergenic
ATCAATGCTGTCTAATTTAA+TGG 0.189325 1_3:-54269620 Msa0125710:CDS
CCGTATTTGAAACTACTTTC+TGG 0.193440 1_3:-54279293 Msa0125710:CDS
TGGATGTCAAACTGATATTT+TGG 0.196024 1_3:-54271283 Msa0125710:CDS
TGCTGTTGTTGTTGAAGTTT+TGG 0.205063 1_3:-54278698 Msa0125710:CDS
ATTTCCTCTCTGTTCATAAA+AGG 0.208310 1_3:+54266087 None:intergenic
ACATGCTCTCTGTAAGCTTT+AGG 0.211122 1_3:+54263701 None:intergenic
AAGTTATGGCTTGCATATTT+TGG 0.215559 1_3:-54272151 Msa0125710:CDS
AATCCTTCAAAGAATGTAAT+TGG 0.216676 1_3:-54278730 Msa0125710:CDS
GCTGCAAGGCAGTAGGGTTT+AGG 0.219910 1_3:+54279851 None:intergenic
GATATGTTGGCAACATTTAT+TGG 0.222201 1_3:-54263871 Msa0125710:CDS
AACATATTATGGCCATTTAA+AGG 0.225353 1_3:-54262121 Msa0125710:three_prime_UTR
TTCTGTTAAGGAATGGTATA+TGG 0.227314 1_3:-54278949 Msa0125710:intron
TATGATCATTTGCAGTTCTA+AGG 0.249022 1_3:-54276753 Msa0125710:intron
CTCTCCTTGCTCAAGGGAAT+TGG 0.250008 1_3:-54269658 Msa0125710:CDS
AATGTTTCTGGAGTTGTTTC+TGG 0.274972 1_3:-54266047 Msa0125710:CDS
ATGATGAACAGAGTCATTTA+TGG 0.277685 1_3:+54276685 None:intergenic
GGTATATGGGAGTTTCTTAA+AGG 0.279802 1_3:-54278935 Msa0125710:CDS
CAAGATTGATTAAGGCAATA+AGG 0.280374 1_3:+54277238 None:intergenic
TCGCTAAGAAGTTTAAATAA+AGG 0.280802 1_3:+54267292 None:intergenic
CTCTTATCAGCGGCTTCTTT+AGG 0.291025 1_3:+54279611 None:intergenic
CTGCAAGGCAGTAGGGTTTA+GGG 0.292602 1_3:+54279852 None:intergenic
GCTGCGTTGATCAAAGTTCT+TGG 0.297231 1_3:-54264349 Msa0125710:CDS
AGAATTGAGAAGTTAGGGTT+AGG 0.306103 1_3:+54279762 None:intergenic
GATAAAGTCCTCTAAGGATT+TGG 0.308192 1_3:-54264287 Msa0125710:CDS
GAAGGAAGAATTGAGAAGTT+AGG 0.308727 1_3:+54279756 None:intergenic
CGCTAAGAAGTTTAAATAAA+GGG 0.309156 1_3:+54267293 None:intergenic
GAATGCTGGTGATGTTCTTT+TGG 0.309414 1_3:-54272363 Msa0125710:CDS
TTTGCATATTTGGAGGTAAT+AGG 0.311235 1_3:+54270746 None:intergenic
CTGTCAAGGGCTGGCATCTC+AGG 0.316846 1_3:-54263087 Msa0125710:CDS
TCTAGTTTGAACAACAATTC+AGG 0.319024 1_3:+54265992 None:intergenic
AGAAGGCTCTCTTGTCATTC+AGG 0.319624 1_3:-54265963 Msa0125710:intron
TTAGAAGTTCTTCCAGAAAC+TGG 0.324863 1_3:+54270875 None:intergenic
CTTTGTACTCTGCAGCAAAA+TGG 0.327871 1_3:-54271303 Msa0125710:CDS
CTCTTTACAGAAAGTGTTGC+AGG 0.331318 1_3:-54269389 Msa0125710:intron
ATATATCCTTTCGTGAATTC+TGG 0.333723 1_3:-54278643 Msa0125710:CDS
CGTGTTCTTCTTCTTCGTTT+TGG 0.336037 1_3:+54279797 None:intergenic
AATGGCCATAATATGTTCAT+TGG 0.337522 1_3:+54262127 None:intergenic
TCTATTCCTGAGACAAATTC+TGG 0.343670 1_3:+54264121 None:intergenic
CATGCTCTCTGTAAGCTTTA+GGG 0.347308 1_3:+54263702 None:intergenic
TTGAGCAGCGATGGTGTAAA+TGG 0.347980 1_3:+54279580 None:intergenic
GTAGACCAATGAACATATTA+TGG 0.352074 1_3:-54262132 Msa0125710:three_prime_UTR
AGTTCAAAACATTGATTTAG+TGG 0.354050 1_3:-54263758 Msa0125710:CDS
TGTGTAATGTCTTCTCCTTC+AGG 0.354547 1_3:-54269430 Msa0125710:CDS
TTTATCTTCAATTAACTTGA+AGG 0.354964 1_3:-54272740 Msa0125710:CDS
CTGCTTGATATAAATTCTTC+GGG 0.357022 1_3:-54275874 Msa0125710:CDS
CTAAGAAATGGAGGTGTTCA+TGG 0.357685 1_3:+54271715 None:intergenic
TGTTTCTGTTCTTGTTACTT+TGG 0.358918 1_3:-54264218 Msa0125710:CDS
TATCTGCGATTGTTCCTTGT+TGG 0.359436 1_3:-54266598 Msa0125710:CDS
TCACGTGTACCCCAGGCTCT+TGG 0.362588 1_3:-54264703 Msa0125710:intron
TTGAATATGATTTACAGTTT+CGG 0.362706 1_3:+54267195 None:intergenic
TCAATTCTACACGGGGTTGC+AGG 0.365876 1_3:-54269210 Msa0125710:CDS
GATAGGGCCATATCTTTCTA+TGG 0.367033 1_3:-54263613 Msa0125710:CDS
TGCTGCACTATAACCATTCT+AGG 0.367211 1_3:+54278887 None:intergenic
TCCTTCTCTTCTTGTTCCAT+TGG 0.368665 1_3:-54271253 Msa0125710:CDS
AGATTGCCTGATGATTTATC+TGG 0.368678 1_3:+54272107 None:intergenic
TGTTAAGTTACACGCCTTGC+GGG 0.369016 1_3:-54271005 Msa0125710:CDS
TACCTGGACAAGATTGATTA+AGG 0.369079 1_3:+54277230 None:intergenic
CACACAAGTTGATAGGATCT+TGG 0.372295 1_3:+54276655 None:intergenic
ATCATCAAACTGTCTCAATA+TGG 0.372395 1_3:+54274574 None:intergenic
AAAATTGGCTGGCAATTTCA+TGG 0.372685 1_3:-54272710 Msa0125710:CDS
ACTGCTTGATATAAATTCTT+CGG 0.376474 1_3:-54275875 Msa0125710:CDS
CAGAAAGCAGAGAAAATATA+TGG 0.378151 1_3:+54266923 None:intergenic
GAAATTCTTTGCAGTCTGTA+AGG 0.379461 1_3:-54271048 Msa0125710:intron
GAGTCAACTCGGAGAGCTTA+TGG 0.379771 1_3:-54265251 Msa0125710:CDS
TGTTCACTTCCTTAGTTTCA+AGG 0.380452 1_3:-54266240 Msa0125710:CDS
TCTCCTTGCTCAAGGGAATT+GGG 0.380998 1_3:-54269657 Msa0125710:CDS
CAGTCCCCAGAGTAAAGAAT+TGG 0.381140 1_3:-54279369 Msa0125710:CDS
CACCAAAGTGTGGCAAAATT+AGG 0.381449 1_3:-54267552 Msa0125710:CDS
AGCGTTGTTCACGTCCTCAC+TGG 0.383806 1_3:-54270800 Msa0125710:CDS
TGCATTTAGAGGTCCGAGTT+TGG 0.383943 1_3:+54272175 None:intergenic
TTGATGATAGTTTGCTTGCT+TGG 0.385008 1_3:-54277369 Msa0125710:CDS
CTTGAACCTTTGTTGCCTTT+AGG 0.387639 1_3:+54264634 None:intergenic
ACAGCTGATTCTCCAATAAC+TGG 0.392134 1_3:+54266847 None:intergenic
AAGTTCTCGTTGGCTTCAAT+TGG 0.392921 1_3:-54264602 Msa0125710:CDS
GGGTCGAAATTACTTGTTAG+AGG 0.393840 1_3:-54279905 None:intergenic
GGTTTGATACGTTCAGTTGC+CGG 0.395567 1_3:-54277312 Msa0125710:CDS
GTCTGTAAGGGTTGCTTCCA+TGG 0.396373 1_3:-54271035 Msa0125710:CDS
GAATTGAGAAGTTAGGGTTA+GGG 0.397023 1_3:+54279763 None:intergenic
AACAATTGTGTTTGATATGT+TGG 0.397730 1_3:-54263884 Msa0125710:CDS
TATTCTAGCTCGTGTCTTCT+CGG 0.397937 1_3:+54262392 None:intergenic
CTCTATCCAATTCTTTACTC+TGG 0.397972 1_3:+54279363 None:intergenic
ACCAATCGATATTATCTTCA+TGG 0.398205 1_3:+54272683 None:intergenic
TCAAGTTTCGACAGTGCCTT+TGG 0.399502 1_3:+54264325 None:intergenic
GACCGTGATAAAGTCCTCTA+AGG 0.400034 1_3:-54264293 Msa0125710:CDS
GTACAAAATGTTAAAGCATC+TGG 0.400035 1_3:+54266187 None:intergenic
TACTAGTCAAAGAAATTAAC+TGG 0.400542 1_3:-54273223 Msa0125710:CDS
GAAGACACGAGCTAGAATAT+TGG 0.402292 1_3:-54262388 Msa0125710:CDS
AAGCCAATTACATTCTTTGA+AGG 0.402673 1_3:+54278727 None:intergenic
CTAAGCAAGTATTTGAAGTA+AGG 0.403689 1_3:+54263226 None:intergenic
TCTGAAAGATCCTTCTTATC+AGG 0.405015 1_3:+54278613 None:intergenic
AAGGAAGAATTGAGAAGTTA+GGG 0.405988 1_3:+54279757 None:intergenic
CGGAAAGACTTGACGGCGGT+TGG 0.408112 1_3:+54267215 None:intergenic
TTAGCACCGATGAAAGGTTT+AGG 0.409118 1_3:-54279412 Msa0125710:CDS
TACCCAACTGCTGTTGAGGC+TGG 0.410333 1_3:-54263919 Msa0125710:CDS
GTACATCACCATTAGCATTA+CGG 0.411573 1_3:+54268836 None:intergenic
ATAGTTTCACACAAGTTGAT+AGG 0.411967 1_3:+54276648 None:intergenic
TCAAGAAGCTTAGAAGAATC+TGG 0.412636 1_3:+54274497 None:intergenic
CGTCTCAATATTGAGGAAAC+AGG 0.412781 1_3:+54266210 None:intergenic
TACCTCCAAATATGCAAAAC+AGG 0.412938 1_3:-54270741 Msa0125710:intron
CGTTGAACTGCTTGAGGATG+TGG 0.415239 1_3:-54262286 Msa0125710:CDS
CATATGCAGAATAGATAATC+TGG 0.415561 1_3:-54267473 Msa0125710:CDS
GCAGGATGATAGCAAGATAA+AGG 0.416003 1_3:-54271781 Msa0125710:intron
CAGAGAAAATATATGGTTGC+GGG 0.417767 1_3:+54266930 None:intergenic
TCTAGCAATGGCAAATTCCT+TGG 0.418379 1_3:-54279723 Msa0125710:exon
CACGTGTACCCCAGGCTCTT+GGG 0.418927 1_3:-54264702 Msa0125710:intron
CCAGAAAGTAGTTTCAAATA+CGG 0.419098 1_3:+54279293 None:intergenic
TCCATTGGCCGGTGATGATC+AGG 0.421713 1_3:-54271238 Msa0125710:intron
CTGATCATGGAAGTATGATA+TGG 0.423107 1_3:+54273444 None:intergenic
TACAGAGCGCGGTTGAAAAC+AGG 0.425470 1_3:+54279820 None:intergenic
AAAGTTTCTCGTTGTTCTGT+TGG 0.425961 1_3:-54276868 Msa0125710:CDS
TGAAACTGCTGCCACTTTCA+AGG 0.426613 1_3:+54264501 None:intergenic
AAGACACGAGCTAGAATATT+GGG 0.426925 1_3:-54262387 Msa0125710:CDS
GGACTTAAATTTAAAAGCTC+TGG 0.429000 1_3:-54273246 Msa0125710:CDS
TTATCACCTGCAGATAATTA+GGG 0.429558 1_3:+54276842 None:intergenic
TGATGAACAGAGTCATTTAT+GGG 0.430170 1_3:+54276686 None:intergenic
TTGTTGTTCAAACTAGAATC+AGG 0.430374 1_3:-54265986 Msa0125710:CDS
GGTCAAATGGCGGTCACAGC+TGG 0.430545 1_3:-54262589 Msa0125710:CDS
TTCTGTTCTTGTTACTTTGG+AGG 0.431905 1_3:-54264215 Msa0125710:CDS
TGTTGTTTGCATCGGTCAAA+TGG 0.435055 1_3:-54262602 Msa0125710:CDS
AGATGGGGTGCATTTGAGGC+TGG 0.435141 1_3:+54264241 None:intergenic
AACAAGATGGGGTGCATTTG+AGG 0.436206 1_3:+54264237 None:intergenic
CAGATAGATTTCAAAACTGT+TGG 0.436222 1_3:-54267598 Msa0125710:CDS
TGACAACAACATCGGTAGTC+CGG 0.436550 1_3:+54266953 None:intergenic
AGATCAAGTTGAGAAACAAT+AGG 0.436903 1_3:+54262691 None:intergenic
GTCGATGAAACTGTATCTTC+AGG 0.437715 1_3:-54263643 Msa0125710:CDS
TCCTCACTGGGGTCCACACC+GGG 0.439221 1_3:-54270787 Msa0125710:CDS
ATCTTCTAATAATAGATTCA+AGG 0.442427 1_3:+54264422 None:intergenic
AAGATTGATTAAGGCAATAA+GGG 0.442710 1_3:+54277239 None:intergenic
AGTAACTGTGTTCATCATCT+TGG 0.443392 1_3:-54263205 Msa0125710:CDS
TTTCTTATAGGGATTTGCCT+GGG 0.443564 1_3:-54276926 Msa0125710:intron
ACCTCTAAATGCAAAAGTTA+TGG 0.445268 1_3:-54272165 Msa0125710:CDS
ACTGGGAAATTCTCCAACTA+CGG 0.446747 1_3:-54269874 Msa0125710:CDS
TGGTTGTGTTTCAGGATTGG+AGG 0.446865 1_3:-54279441 Msa0125710:intron
AACATTGATTTAGTGGAAGA+AGG 0.447201 1_3:-54263751 Msa0125710:CDS
TTAGGATCGAACAAGATAGA+AGG 0.448135 1_3:+54279629 None:intergenic
CTCACAAGCACGAGCAATCC+CGG 0.449224 1_3:+54277293 None:intergenic
AGATAAAGATGTTGGAGAAA+AGG 0.450730 1_3:-54265056 Msa0125710:intron
TCTCTTCTTGTTCCATTGGC+CGG 0.453208 1_3:-54271249 Msa0125710:CDS
CACACTTCCAACGAAGGCCT+TGG 0.454043 1_3:-54277064 Msa0125710:CDS
TCATTCAAAGCATGTATTTG+AGG 0.454056 1_3:-54266627 Msa0125710:CDS
CTGAAATTGTTGAGCACAGA+AGG 0.454487 1_3:-54266418 Msa0125710:CDS
ATGCAAGGCTCTACATAAGC+AGG 0.456426 1_3:+54269257 None:intergenic
GGTGGCTTTCCTTGAAACTA+AGG 0.458786 1_3:+54266231 None:intergenic
AACAAGAAGAGAAGGAAATT+CGG 0.458926 1_3:+54271260 None:intergenic
TGAACTGTGCTGCTAAGAAA+TGG 0.461333 1_3:+54271703 None:intergenic
TCTATCCAATTCTTTACTCT+GGG 0.461382 1_3:+54279364 None:intergenic
AGGAAATTTCAGTTGGCGGT+TGG 0.463593 1_3:-54279885 Msa0125710:five_prime_UTR
GGAAAGACTTGACGGCGGTT+GGG 0.464408 1_3:+54267216 None:intergenic
TCAAATGTCAATTAGCTGGC+TGG 0.465347 1_3:-54276339 Msa0125710:intron
TACCATGCCATAGAAAGATA+TGG 0.465493 1_3:+54263606 None:intergenic
GGTTCAGAGGTTGCCACAAA+AGG 0.468225 1_3:+54262560 None:intergenic
TTCAGTTAAATCTCTTGCAC+AGG 0.468315 1_3:-54262259 Msa0125710:CDS
CTCAAGCAGTTCAACGAGGA+TGG 0.471313 1_3:+54262293 None:intergenic
GACTCAACATCTTCGATGTC+AGG 0.472414 1_3:-54276611 Msa0125710:intron
GTTTGATACGTTCAGTTGCC+GGG 0.473503 1_3:-54277311 Msa0125710:CDS
TGCCTTAATCAATCTTGTCC+AGG 0.474061 1_3:-54277232 Msa0125710:intron
CACACTTTGGTGCAAGTATG+AGG 0.477598 1_3:+54267563 None:intergenic
AGGTAATAGGATATTATGAT+AGG 0.478047 1_3:+54270759 None:intergenic
GATGGGGTGCATTTGAGGCT+GGG 0.478686 1_3:+54264242 None:intergenic
ACCCAACTGCTGTTGAGGCT+GGG 0.479632 1_3:-54263918 Msa0125710:CDS
TGATAATATTGCTGAAGAAA+CGG 0.480532 1_3:-54273192 Msa0125710:intron
TCCCCAGCCTCAACAGCAGT+TGG 0.481565 1_3:+54263916 None:intergenic
TTAGAGGAAATTTCAGTTGG+CGG 0.482595 1_3:-54279889 Msa0125710:five_prime_UTR
CATTGTGAGGAAAGAGTTGA+AGG 0.483626 1_3:-54265167 Msa0125710:CDS
GCGTCAAACCTTCCCGTAGT+TGG 0.484266 1_3:+54269861 None:intergenic
CTTCGTCCAGAATTTGTCTC+AGG 0.484756 1_3:-54264127 Msa0125710:CDS
GCAGTTGTTGTCAAACTTGG+TGG 0.487519 1_3:-54264193 Msa0125710:CDS
GCGTTGTTCACGTCCTCACT+GGG 0.488463 1_3:-54270799 Msa0125710:CDS
CAGAGTAAAGAATTGGATAG+AGG 0.488546 1_3:-54279362 Msa0125710:CDS
AGCTTTAAATGTCGATGGCT+TGG 0.489294 1_3:-54274528 Msa0125710:CDS
AGCTACTGATAGAGTTTGCC+CGG 0.490850 1_3:-54266972 Msa0125710:CDS
CTTCTTTCAAGTTATCTACA+AGG 0.490910 1_3:+54262346 None:intergenic
TGCTTTCCAAGTACTGATCA+TGG 0.491140 1_3:+54273431 None:intergenic
ATGAGCACGGGATTCCACTT+TGG 0.491601 1_3:+54264096 None:intergenic
CTTTCAACTTGGACTACAGC+AGG 0.493781 1_3:+54271345 None:intergenic
CCCAACTGCTGTTGAGGCTG+GGG 0.493988 1_3:-54263917 Msa0125710:CDS
TGTGTTGGCAAGCTGCTGTC+TGG 0.498264 1_3:-54274449 Msa0125710:intron
ACAGTCAGCTTAACGCCTAA+AGG 0.499628 1_3:-54264649 Msa0125710:CDS
TCTGTTAAGGAATGGTATAT+GGG 0.499920 1_3:-54278948 Msa0125710:intron
TAACAAGAACAGAAACAAGA+TGG 0.500724 1_3:+54264224 None:intergenic
TGAAGAAAGACATAACAAAC+AGG 0.501969 1_3:-54267414 Msa0125710:intron
CAAATGTCAATTAGCTGGCT+GGG 0.502489 1_3:-54276338 Msa0125710:intron
GAGGCAGTTGTTGTCAAACT+TGG 0.502858 1_3:-54264196 Msa0125710:CDS
CTCAACGAATCTAACATCAT+AGG 0.503250 1_3:+54262187 None:intergenic
ATATTTCTAACAATGGCGGC+AGG 0.504743 1_3:+54263941 None:intergenic
TGATGTTAGATTCGTTGAGC+TGG 0.505380 1_3:-54262183 Msa0125710:three_prime_UTR
TCCTATTCTGAAGGCTGAGT+GGG 0.506035 1_3:-54272396 Msa0125710:CDS
TGGTCTTCAGCCTGATAAGA+AGG 0.506036 1_3:-54278623 Msa0125710:CDS
TATCTTCAGGAAGCATGGAT+AGG 0.507487 1_3:-54263630 Msa0125710:CDS
AACAGATATCTTGTCTGTCA+AGG 0.508062 1_3:-54263101 Msa0125710:CDS
TCCCACTCAGCCTTCAGAAT+AGG 0.509055 1_3:+54272395 None:intergenic
TACAAAGAGATCCATAGCAC+TGG 0.509387 1_3:+54271319 None:intergenic
TTTGCTGTCCTTGATAGAAA+AGG 0.510636 1_3:-54276711 Msa0125710:CDS
ATCAAACCATTCAAAAGTGA+TGG 0.511914 1_3:+54277327 None:intergenic
GACAACAACATCGGTAGTCC+GGG 0.512307 1_3:+54266954 None:intergenic
TCATCTATTGTGGCATTCCA+TGG 0.512846 1_3:-54263835 Msa0125710:CDS
CCCCAGCCTCAACAGCAGTT+GGG 0.512947 1_3:+54263917 None:intergenic
ATCAAACAACTCCTTGAAAG+TGG 0.513706 1_3:-54264512 Msa0125710:CDS
AAACAAGGCATTTGTTTCAG+AGG 0.513764 1_3:-54275842 Msa0125710:intron
CTAGTGCCAGATAAATCATC+AGG 0.514392 1_3:-54272113 Msa0125710:CDS
CTTGTGCTGATAAAACCAAA+AGG 0.516170 1_3:-54272595 Msa0125710:intron
CATCCTCGTTGAACTGCTTG+AGG 0.516563 1_3:-54262292 Msa0125710:CDS
GGCCATATCTTTCTATGGCA+TGG 0.516981 1_3:-54263608 Msa0125710:CDS
TTTCTGTGCCGTAATGCTAA+TGG 0.517009 1_3:-54268844 Msa0125710:CDS
TTCTTATAGGGATTTGCCTG+GGG 0.518384 1_3:-54276925 Msa0125710:intron
AGCACTGGAGACTTTCAACT+TGG 0.518538 1_3:+54271334 None:intergenic
AAGAGAAGCTGCAAGGCAGT+AGG 0.518720 1_3:+54279844 None:intergenic
GGCAACATTTATTGGTACAA+TGG 0.519554 1_3:-54263863 Msa0125710:CDS
AAAGTGGAATCCCGTGCTCA+TGG 0.520023 1_3:-54264094 Msa0125710:CDS
ACAGACTCTATTGATAATCC+TGG 0.521062 1_3:-54267173 Msa0125710:CDS
GTCCTCACTGGGGTCCACAC+CGG 0.522145 1_3:-54270788 Msa0125710:CDS
TTAATTGAAGATAAACATCC+AGG 0.522220 1_3:+54272748 None:intergenic
ATACTTCCATGATCAGTACT+TGG 0.522733 1_3:-54273437 Msa0125710:CDS
AAGGAGTAATGGATAAATCA+TGG 0.523492 1_3:+54273402 None:intergenic
GATCATTCAGATAAAGATGT+TGG 0.523801 1_3:-54265064 Msa0125710:CDS
CTATTGTGGCATTCCATGGA+AGG 0.527726 1_3:-54263831 Msa0125710:CDS
ATGTGGTCATCCAACGAGGC+AGG 0.528235 1_3:+54262661 None:intergenic
ACTGTCTCAATATGGCCTCT+AGG 0.528303 1_3:+54274582 None:intergenic
TCAAGGACAGCAAAGCCTGC+TGG 0.528595 1_3:+54276720 None:intergenic
ATCTTCAGGAAGCATGGATA+GGG 0.529004 1_3:-54263629 Msa0125710:CDS
TAACTTAACAATACACTCCA+TGG 0.529174 1_3:+54271018 None:intergenic
TAAATCATCAGGCAATCTAC+TGG 0.529570 1_3:-54272102 Msa0125710:intron
AACTGTATCTTCAGGAAGCA+TGG 0.529959 1_3:-54263635 Msa0125710:CDS
ACAGTTTCGGAAAGACTTGA+CGG 0.531853 1_3:+54267208 None:intergenic
TCAGTAACAAAACATCAAGA+AGG 0.531872 1_3:+54267434 None:intergenic
TTGTTAGAGGAAATTTCAGT+TGG 0.532140 1_3:-54279892 Msa0125710:five_prime_UTR
TCTAGACCCACCTGCCTCGT+TGG 0.533358 1_3:-54262671 Msa0125710:CDS
ATTACTCCTTGCTATGCCAC+AGG 0.533955 1_3:-54273389 Msa0125710:intron
TCTTGCACAGGAAATTCTGC+AGG 0.535392 1_3:-54262247 Msa0125710:CDS
GGGTGCAACACTACCTAGAA+TGG 0.535731 1_3:-54278900 Msa0125710:CDS
ATAATTCCTAAACCTTTCAT+CGG 0.535764 1_3:+54279406 None:intergenic
AAATTCTTTGCAGTCTGTAA+GGG 0.537394 1_3:-54271047 Msa0125710:intron
CAATCGCAGACATCGATACC+TGG 0.537531 1_3:-54272766 Msa0125710:intron
GGAAGAACTTCTAATTGCGT+TGG 0.537618 1_3:-54270866 Msa0125710:CDS
CTTAATAGTCAATTCTACAC+GGG 0.538323 1_3:-54269218 Msa0125710:CDS
GTTTGGCTTGTATCATCCAA+AGG 0.541542 1_3:-54276043 Msa0125710:intron
CTTAAAGGTGTGAAAGACTC+GGG 0.541680 1_3:-54278920 Msa0125710:CDS
ATGTTCAATGCGACCCCGCA+AGG 0.543120 1_3:+54270991 None:intergenic
CAAGCAGCTTTAAATGTCGA+TGG 0.545621 1_3:-54274533 Msa0125710:CDS
AAAACATCCAAGGCCTTCGT+TGG 0.546236 1_3:+54277057 None:intergenic
ATATCTTGTCTGTCAAGGGC+TGG 0.546502 1_3:-54263096 Msa0125710:CDS
GTTGAAAGTCTCCAGTGCTA+TGG 0.546932 1_3:-54271330 Msa0125710:CDS
ATTATGGCCATTTAAAGGAA+AGG 0.546945 1_3:-54262116 Msa0125710:three_prime_UTR
TGGACTCCCTAATTATCTGC+AGG 0.551807 1_3:-54276848 Msa0125710:intron
AAGATAGAAGGACGAGTGAA+CGG 0.552986 1_3:+54279641 None:intergenic
AGAGAAGCTGCAAGGCAGTA+GGG 0.553654 1_3:+54279845 None:intergenic
CATCTGGCGTCTCAATATTG+AGG 0.553929 1_3:+54266203 None:intergenic
CTTTCGTAATCCATGAGCAC+GGG 0.554981 1_3:+54264084 None:intergenic
AGTGGCAGCAGTTTCAGCGT+TGG 0.555141 1_3:-54264494 Msa0125710:CDS
AATTATACTTCACGGTTCAG+AGG 0.555219 1_3:+54262547 None:intergenic
GACCTACTTGTTGTTTGCAT+CGG 0.555245 1_3:-54262610 Msa0125710:CDS
AACAAGAACAGAAACAAGAT+GGG 0.555402 1_3:+54264225 None:intergenic
AGTGATTCTCTCCTTGCTCA+AGG 0.555415 1_3:-54269665 Msa0125710:CDS
TTGTTAAGTTACACGCCTTG+CGG 0.555552 1_3:-54271006 Msa0125710:CDS
GACAATTCTAATAAAACCCC+AGG 0.555785 1_3:+54276909 None:intergenic
TTAGATTCGTTGAGCTGGAA+TGG 0.556267 1_3:-54262178 Msa0125710:three_prime_UTR
TGCGGAATCAGTAAGTGCTA+TGG 0.557132 1_3:+54279676 None:intergenic
CTGGGAAATTCTCCAACTAC+GGG 0.557628 1_3:-54269873 Msa0125710:CDS
TGTTTGATGAATCGTCATCA+AGG 0.559889 1_3:+54264527 None:intergenic
TAAGGATGAAGACTGCCAGC+AGG 0.559986 1_3:-54276735 Msa0125710:CDS
TTTCAACCTGTGGCATAGCA+AGG 0.561730 1_3:+54273383 None:intergenic
GAGACATGATTATATCCTCC+AGG 0.561844 1_3:+54267155 None:intergenic
GCAGAGAAAATATATGGTTG+CGG 0.561950 1_3:+54266929 None:intergenic
TGTGGCATAGCAAGGAGTAA+TGG 0.562119 1_3:+54273391 None:intergenic
GAACAACAATATAAGTAATG+AGG 0.562235 1_3:+54266258 None:intergenic
GAAGTTACCTTGAGCAGCGA+TGG 0.562297 1_3:+54279571 None:intergenic
GATCAAAGTTCTTGGTCCAA+AGG 0.563819 1_3:-54264341 Msa0125710:CDS
GCCAATGGAACAAGAAGAGA+AGG 0.564011 1_3:+54271252 None:intergenic
ACCATGAAGATAATATCGAT+TGG 0.565898 1_3:-54272684 Msa0125710:CDS
TCAAGCAGTTCAACGAGGAT+GGG 0.566456 1_3:+54262294 None:intergenic
TTCTGATTAGCACCGATGAA+AGG 0.567079 1_3:-54279418 Msa0125710:CDS
AATATACCCAACTGCTGTTG+AGG 0.567549 1_3:-54263923 Msa0125710:CDS
AAGTGTGTTTCCTATTCTGA+AGG 0.567559 1_3:-54272405 Msa0125710:CDS
ATGGGGTGCATTTGAGGCTG+GGG 0.567866 1_3:+54264243 None:intergenic
CTAATATTGCAGAGTCAACT+CGG 0.568126 1_3:-54265262 Msa0125710:intron
CAGCAATGTCTTCGTGATTG+TGG 0.568575 1_3:-54278869 Msa0125710:CDS
TCTTAAAGGTGTGAAAGACT+CGG 0.569391 1_3:-54278921 Msa0125710:CDS
AGCTTGTAATTGAGAAGCCA+AGG 0.570228 1_3:+54279706 None:intergenic
AGATTCTTCTAAGCTTCTTG+AGG 0.571259 1_3:-54274495 Msa0125710:CDS
TAGTTTCTTTAAAACATCCA+AGG 0.571442 1_3:+54277047 None:intergenic
CGGGATTGCTCGTGCTTGTG+AGG 0.575385 1_3:-54277292 Msa0125710:CDS
AGCTGGAATGGTGTAATGAT+AGG 0.575878 1_3:-54262166 Msa0125710:three_prime_UTR
ACCTGATCATCACCGGCCAA+TGG 0.576742 1_3:+54271237 None:intergenic
ATAAGCTTGCTGAGAACCAT+CGG 0.577111 1_3:-54263582 Msa0125710:intron
GACTCGTACCTGATCATCAC+CGG 0.577862 1_3:+54271230 None:intergenic
TGGTCATCCAACGAGGCAGG+TGG 0.578970 1_3:+54262664 None:intergenic
TCATCAAATTCCGTCACGCT+AGG 0.579162 1_3:+54262631 None:intergenic
TGAAGATCATCTCCACCTGA+AGG 0.580784 1_3:+54269415 None:intergenic
TTGCGGGGTCGCATTGAACA+TGG 0.582274 1_3:-54270989 Msa0125710:intron
ACAGATATCTTGTCTGTCAA+GGG 0.582471 1_3:-54263100 Msa0125710:CDS
GTTAAGTTACACGCCTTGCG+GGG 0.582859 1_3:-54271004 Msa0125710:CDS
TGTGTTCATCATCTTGGCGA+TGG 0.584716 1_3:-54263199 Msa0125710:CDS
TCATAAAAGGAAACTAAAGA+AGG 0.584814 1_3:+54266100 None:intergenic
TAAATTTCTCTGTCATTGTG+AGG 0.584896 1_3:-54265180 Msa0125710:CDS
GACGCACTTTCCCTTGAGGA+AGG 0.585066 1_3:-54267244 Msa0125710:CDS
ACTCACATTTATGCGCATCA+AGG 0.585262 1_3:+54268795 None:intergenic
CTCAGGAATAGATGCCAAAG+TGG 0.587107 1_3:-54264110 Msa0125710:CDS
ATTTACACCATCGCTGCTCA+AGG 0.587470 1_3:-54279578 Msa0125710:intron
TCGAGCGTTTGAAGTGCAGC+CGG 0.587577 1_3:+54279257 None:intergenic
TCATCGCAAAATTCTAGCAA+TGG 0.587825 1_3:-54279735 Msa0125710:exon
GTTGGGTATATTTCTAACAA+TGG 0.588872 1_3:+54263934 None:intergenic
AGAGTAAAGAATTGGATAGA+GGG 0.592118 1_3:-54279361 Msa0125710:CDS
AATCATGTCTCATGATAGCA+TGG 0.592596 1_3:-54267143 Msa0125710:CDS
TCAACGCAGCGGAAGTTCGA+AGG 0.593614 1_3:+54264362 None:intergenic
GGATTCAGTACTCTTATCAG+CGG 0.596784 1_3:+54279601 None:intergenic
AGGAAATAGAGTCTTTGAGT+GGG 0.597321 1_3:-54262227 Msa0125710:CDS
GATCAAGATCAAGTTCTCGT+TGG 0.598397 1_3:-54264612 Msa0125710:CDS
TTGCATCTACAAGATGCAAG+AGG 0.600709 1_3:+54265215 None:intergenic
ATCCTTAGAGGACTTTATCA+CGG 0.603588 1_3:+54264291 None:intergenic
ACTGCTGCACGGAGTTCAGA+AGG 0.604583 1_3:+54276280 None:intergenic
TTCAAGGCATGCAACGAAGG+TGG 0.605103 1_3:+54264438 None:intergenic
TAGTACAGATACTTAACATA+CGG 0.606001 1_3:-54279047 Msa0125710:intron
ATGGCCATTTAAAGGAAAGG+TGG 0.608982 1_3:-54262113 Msa0125710:three_prime_UTR
ATATTATGATAGGACGAGCC+CGG 0.609745 1_3:+54270769 None:intergenic
AGATTCAAGGCATGCAACGA+AGG 0.610484 1_3:+54264435 None:intergenic
GTAATGTCTTCTCCTTCAGG+TGG 0.611054 1_3:-54269427 Msa0125710:CDS
AAATGACGCACTTTCCCTTG+AGG 0.611941 1_3:-54267248 Msa0125710:CDS
AAACTATGCGCGCTGTTGTG+AGG 0.612613 1_3:-54265144 Msa0125710:CDS
GTGATTCTCTCCTTGCTCAA+GGG 0.613819 1_3:-54269664 Msa0125710:CDS
TTCCTATTCTGAAGGCTGAG+TGG 0.614009 1_3:-54272397 Msa0125710:CDS
TGGAGAATCAGCTGTCACAC+AGG 0.614162 1_3:-54266839 Msa0125710:intron
TGGGAATCTTCAGTGAATGC+TGG 0.615272 1_3:-54272377 Msa0125710:CDS
GCTTTCGTAATCCATGAGCA+CGG 0.616224 1_3:+54264083 None:intergenic
CAGGAAATAGAGTCTTTGAG+TGG 0.616721 1_3:-54262228 Msa0125710:CDS
AAATGACTCTGTTCATCATG+TGG 0.618126 1_3:-54276681 Msa0125710:CDS
AACAGGAAAGAGAAGCTGCA+AGG 0.618247 1_3:+54279837 None:intergenic
GATTGCTCGTGCTTGTGAGG+AGG 0.618365 1_3:-54277289 Msa0125710:CDS
TTCAAACTAGAATCAGGAGA+AGG 0.620739 1_3:-54265980 Msa0125710:CDS
TCGAAGGCAACTAGAAGTCA+CGG 0.621010 1_3:+54264378 None:intergenic
CTCATACTTGCACCAAAGTG+TGG 0.624114 1_3:-54267562 Msa0125710:CDS
GAAGGATCTTTCAGATCACA+AGG 0.624368 1_3:-54278605 Msa0125710:intron
CAGTAACAAAACATCAAGAA+GGG 0.625838 1_3:+54267435 None:intergenic
CTATCCAATTCTTTACTCTG+GGG 0.626014 1_3:+54279365 None:intergenic
AATGCATGTGTGTCGTGGTA+CGG 0.626211 1_3:+54279078 None:intergenic
AATGGACAGATCATCTATTG+TGG 0.627181 1_3:-54263845 Msa0125710:CDS
GAAATTCTCCAACTACGGGA+AGG 0.628693 1_3:-54269869 Msa0125710:intron
GATACATGAGCACAATGTTG+AGG 0.631551 1_3:-54279121 Msa0125710:CDS
ATGCCCAATTCCCTTGAGCA+AGG 0.631993 1_3:+54269654 None:intergenic
ACAACTCCAGAAACATTGAC+TGG 0.633006 1_3:+54266053 None:intergenic
TGTTTGCATCGGTCAAATGG+CGG 0.634876 1_3:-54262599 Msa0125710:CDS
AACATCATAGGTAGTCTCGA+AGG 0.636589 1_3:+54262199 None:intergenic
GTTCATCATCTTGGCGATGG+CGG 0.638833 1_3:-54263196 Msa0125710:CDS
TGTACAAATTGCAACTAGAG+AGG 0.639841 1_3:-54268818 Msa0125710:CDS
CTCAATATTGAGGAAACAGG+TGG 0.640604 1_3:+54266213 None:intergenic
TGTTGACACACTTCCAACGA+AGG 0.640723 1_3:-54277070 Msa0125710:CDS
ATGCTCTTGAAGTATATCGA+AGG 0.640746 1_3:+54265100 None:intergenic
TTGGGATGATCCTTCCTCAA+GGG 0.641835 1_3:+54267234 None:intergenic
AACAGTATACAAGTATGACT+TGG 0.642247 1_3:-54266126 Msa0125710:CDS
TATTTCTAACAATGGCGGCA+GGG 0.643298 1_3:+54263942 None:intergenic
GCTGTCTAAGACAGATGATG+TGG 0.643610 1_3:-54266576 Msa0125710:CDS
TGGATTACGAAAGCTTCTTG+CGG 0.644128 1_3:-54264074 Msa0125710:CDS
CATGAATATACCTAGCGTGA+CGG 0.645722 1_3:-54262641 Msa0125710:CDS
TTAACGCCTAAAGGCAACAA+AGG 0.645984 1_3:-54264640 Msa0125710:CDS
GCTTAATAGTCAATTCTACA+CGG 0.647249 1_3:-54269219 Msa0125710:CDS
ATGATAGGACGAGCCCGGTG+TGG 0.649195 1_3:+54270774 None:intergenic
GGGTATATTTCTAACAATGG+CGG 0.649343 1_3:+54263937 None:intergenic
GTTGGGATGATCCTTCCTCA+AGG 0.651749 1_3:+54267233 None:intergenic
AAACGAAGAAGAAGAACACG+AGG 0.654037 1_3:-54279794 Msa0125710:five_prime_UTR
TCACGCTAGGTATATTCATG+TGG 0.655802 1_3:+54262644 None:intergenic
ACGAAGGTGGAACTATTCGA+AGG 0.655938 1_3:+54264451 None:intergenic
AATGTGCTAAGAAGATGTGT+TGG 0.656297 1_3:-54274464 Msa0125710:CDS
TGCAAGGCTCTACATAAGCA+GGG 0.661597 1_3:+54269258 None:intergenic
CAAGTATGAGGTCAAGTATG+CGG 0.662111 1_3:+54267575 None:intergenic
TGTTGTGAGGAATATAACAA+TGG 0.663001 1_3:-54265131 Msa0125710:CDS
GGTCATCCAACGAGGCAGGT+GGG 0.663637 1_3:+54262665 None:intergenic
TGAAGACCAGAATTCACGAA+AGG 0.666347 1_3:+54278637 None:intergenic
TCTGTCTTAGACAGCCAACA+AGG 0.666621 1_3:+54266584 None:intergenic
GGGGTTGCAGGATAAAGCAA+AGG 0.670963 1_3:-54269198 Msa0125710:intron
AATCGATATTATCTTCATGG+TGG 0.671175 1_3:+54272686 None:intergenic
GACTCTATTGATAATCCTGG+AGG 0.679139 1_3:-54267170 Msa0125710:CDS
GACCGATGCAAACAACAAGT+AGG 0.679966 1_3:+54262608 None:intergenic
GCCCGGTGTGGACCCCAGTG+AGG 0.687104 1_3:+54270786 None:intergenic
TTAATAGTCAATTCTACACG+GGG 0.687408 1_3:-54269217 Msa0125710:CDS
GGAAATAGAGTCTTTGAGTG+GGG 0.687994 1_3:-54262226 Msa0125710:CDS
GATGAACAGAGTCATTTATG+GGG 0.694679 1_3:+54276687 None:intergenic
GAACAAATGCATGTGTGTCG+TGG 0.697055 1_3:+54279073 None:intergenic
GAAAATGATGAACTGCTGCA+CGG 0.698379 1_3:+54276269 None:intergenic
GAGCGATACTATAATAAACA+CGG 0.699526 1_3:-54269598 Msa0125710:CDS
TGATGTGGAGAAATTACTGA+AGG 0.704064 1_3:-54266561 Msa0125710:intron
ACTGTGCTGCTAAGAAATGG+AGG 0.705738 1_3:+54271706 None:intergenic
GTTGCGGGTGACAACAACAT+CGG 0.706802 1_3:+54266945 None:intergenic
GGGTCTTATTGACATCCTAG+AGG 0.721055 1_3:-54274597 Msa0125710:CDS
ATTCATGTGGTCATCCAACG+AGG 0.731331 1_3:+54262657 None:intergenic
ACAAGAACAGAAACAAGATG+GGG 0.736831 1_3:+54264226 None:intergenic
CATCCTCAAGCAGTTCAACG+AGG 0.737282 1_3:+54262289 None:intergenic
AAGAACTTTGATCAACGCAG+CGG 0.745827 1_3:+54264351 None:intergenic
CGTTGTTCACGTCCTCACTG+GGG 0.748637 1_3:-54270798 Msa0125710:CDS
GTTTCGGAAAGACTTGACGG+CGG 0.791918 1_3:+54267211 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTATATAATATATTTG+GGG - chr1_3:54263347-54263366 Msa0125710:intron 10.0%
!! AATTAATACTAATATGTAAA+TGG + chr1_3:54263469-54263488 None:intergenic 10.0%
!! AGTTAACAATAAATAATTTA+AGG + chr1_3:54263762-54263781 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG + chr1_3:54266311-54266330 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG + chr1_3:54266311-54266330 None:intergenic 10.0%
!!! TTCAATTTTTATAATTACTT+TGG - chr1_3:54268296-54268315 Msa0125710:intron 10.0%
!!! TCAATTTTTATAATTACTTT+GGG - chr1_3:54268297-54268316 Msa0125710:intron 10.0%
!!! AATTATACTTTTTTCATTTT+TGG - chr1_3:54271530-54271549 Msa0125710:intron 10.0%
!!! TCATTTTAAAAATTAATAGT+TGG + chr1_3:54274107-54274126 None:intergenic 10.0%
!!! TTTCTTTTTATTTTTTTTCT+TGG - chr1_3:54276459-54276478 Msa0125710:intron 10.0%
!!! TATTTTTTAAATCTTTAGTT+AGG + chr1_3:54277754-54277773 None:intergenic 10.0%
!! TAAAGATTTAAAAAATATCA+TGG - chr1_3:54277757-54277776 Msa0125710:intron 10.0%
!!! TTATTAATATGACATTTTTT+TGG - chr1_3:54278619-54278638 Msa0125710:CDS 10.0%
!!! CACTATTTATTTTAAAAATA+TGG - chr1_3:54278955-54278974 Msa0125710:intron 10.0%
!! ATAGAATAATAAGTTTAAAG+TGG + chr1_3:54264112-54264131 None:intergenic 15.0%
!!! CTTTTTAAACTATAAATTTG+AGG + chr1_3:54264341-54264360 None:intergenic 15.0%
!!! AATTTTTTCTGTTTGATTAA+TGG - chr1_3:54264732-54264751 Msa0125710:intron 15.0%
!! ATATACATATTAGAAACAAA+TGG + chr1_3:54264953-54264972 None:intergenic 15.0%
!! AAATTTAAAAAGATTGGAAA+TGG - chr1_3:54265368-54265387 Msa0125710:intron 15.0%
!!! TGATTATATTTTTTCTGAAA+AGG - chr1_3:54266720-54266739 Msa0125710:intron 15.0%
!!! TTTTTTTTTTACTGTCAAAA+TGG - chr1_3:54266754-54266773 Msa0125710:intron 15.0%
!! TTGATAAATAAAAATTTCAG+AGG + chr1_3:54268180-54268199 None:intergenic 15.0%
!!! GTTCTATAATTAACATTTTA+TGG - chr1_3:54270492-54270511 Msa0125710:intron 15.0%
!!! TCAATATTTTACACATTATA+AGG + chr1_3:54271358-54271377 None:intergenic 15.0%
!!! TAAATTTGCATTGATTAATA+TGG + chr1_3:54271482-54271501 None:intergenic 15.0%
!! GCAAAAAAAAAAAAAAAAAG+TGG + chr1_3:54271557-54271576 None:intergenic 15.0%
!!! GATACATACTATTTTATTTT+TGG + chr1_3:54271668-54271687 None:intergenic 15.0%
!!! TGTTAATATGATTTTAATTG+TGG - chr1_3:54272105-54272124 Msa0125710:CDS 15.0%
!!! TAAGAAAGTATCTTATTTTT+GGG - chr1_3:54272210-54272229 Msa0125710:intron 15.0%
!!! TTTATTTTGAAAATCTATCT+TGG - chr1_3:54274144-54274163 Msa0125710:intron 15.0%
!!! TTATTTTGAAAATCTATCTT+GGG - chr1_3:54274145-54274164 Msa0125710:intron 15.0%
!! AAAAATTAATAAAAAGAAGC+AGG + chr1_3:54274886-54274905 None:intergenic 15.0%
!! TTACTTTGTTCAATTATATT+GGG - chr1_3:54276028-54276047 Msa0125710:intron 15.0%
!!! CTTAAACATTATTTTATTAC+AGG - chr1_3:54277944-54277963 Msa0125710:intron 15.0%
!!! TCTCTAGATTTATTTTTTTT+TGG - chr1_3:54278460-54278479 Msa0125710:intron 15.0%
!! ATATATTGAAAATTTAGACA+TGG - chr1_3:54278587-54278606 Msa0125710:intron 15.0%
!! TATATTGAAAATTTAGACAT+GGG - chr1_3:54278588-54278607 Msa0125710:intron 15.0%
!!! GAAATTTGAATTTGAGTTTT+TGG - chr1_3:54262457-54262476 Msa0125710:intron 20.0%
!!! TGATTTGATTTGTTTTTGTA+TGG - chr1_3:54262722-54262741 Msa0125710:intron 20.0%
!!! ATAACTATGTTTTTTGTTAC+AGG - chr1_3:54263151-54263170 Msa0125710:CDS 20.0%
!! CAATTAATTTCATGATTCTA+CGG - chr1_3:54263589-54263608 Msa0125710:CDS 20.0%
!!! TTTTTTAAGTTATCAAACTC+CGG - chr1_3:54263624-54263643 Msa0125710:CDS 20.0%
!! ATTATTCTATATCTATCATC+TGG - chr1_3:54264122-54264141 Msa0125710:CDS 20.0%
!! TTAAATACATGTTCAGTTAT+AGG - chr1_3:54264241-54264260 Msa0125710:CDS 20.0%
!! TAAATACATGTTCAGTTATA+GGG - chr1_3:54264242-54264261 Msa0125710:CDS 20.0%
!! TATAGCGAAGTTAAAAAAAT+AGG + chr1_3:54264790-54264809 None:intergenic 20.0%
!!! TTATGAATCCTTTTTCTTAT+AGG - chr1_3:54264980-54264999 Msa0125710:intron 20.0%
!!! TATGAATCCTTTTTCTTATA+GGG - chr1_3:54264981-54265000 Msa0125710:intron 20.0%
!!! TAATTCTATGATTTTCTTTC+TGG - chr1_3:54265096-54265115 Msa0125710:CDS 20.0%
!! TGAGAGAAATTTAAAAAGAT+TGG - chr1_3:54265362-54265381 Msa0125710:intron 20.0%
!! AATGAAAAAAAAAAGTTGTG+AGG + chr1_3:54265560-54265579 None:intergenic 20.0%
!!! TAAGATTTTATGTAAGATGT+TGG - chr1_3:54265806-54265825 Msa0125710:intron 20.0%
!! TATGTACTAACAGAAAATAA+AGG + chr1_3:54265973-54265992 None:intergenic 20.0%
!!! ATTCTTATTTGATATGTTGT+AGG - chr1_3:54266001-54266020 Msa0125710:CDS 20.0%
!!! TTTTTTTTTGTTGCTAAATG+CGG - chr1_3:54266216-54266235 Msa0125710:CDS 20.0%
!!! TGATTATATTTTTTCCGAAA+AGG - chr1_3:54266316-54266335 Msa0125710:intron 20.0%
!!! ATTTTTTTTTACTGTCAAAC+TGG - chr1_3:54266348-54266367 Msa0125710:intron 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG + chr1_3:54266569-54266588 None:intergenic 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG + chr1_3:54266569-54266588 None:intergenic 20.0%
!! AAAAACACAAATCACAATAT+TGG + chr1_3:54267057-54267076 None:intergenic 20.0%
!! ATGTAACATTTAAACAAAAG+AGG + chr1_3:54267537-54267556 None:intergenic 20.0%
!!! CATTTTGTAATAAAGAAGAT+AGG - chr1_3:54267637-54267656 Msa0125710:intron 20.0%
!!! TTAACTGTAAAATCTAAGAT+GGG + chr1_3:54267993-54268012 None:intergenic 20.0%
!! ATTAACTGTAAAATCTAAGA+TGG + chr1_3:54267994-54268013 None:intergenic 20.0%
!! TAATCAATATATGACAAACT+TGG + chr1_3:54268842-54268861 None:intergenic 20.0%
!! AAAAACAAAACTTCAAAAAC+TGG - chr1_3:54268976-54268995 Msa0125710:intron 20.0%
!!! TTTATCTTCAATTAACTTGA+AGG - chr1_3:54269178-54269197 Msa0125710:intron 20.0%
!! TGTACTATTTGAGAAAAAAT+GGG + chr1_3:54269373-54269392 None:intergenic 20.0%
!! ATGTACTATTTGAGAAAAAA+TGG + chr1_3:54269374-54269393 None:intergenic 20.0%
!!! GGTCATATTTGTTTTAAAAA+CGG - chr1_3:54269420-54269439 Msa0125710:CDS 20.0%
!!! GTCATATTTGTTTTAAAAAC+GGG - chr1_3:54269421-54269440 Msa0125710:CDS 20.0%
!!! TCATATTTGTTTTAAAAACG+GGG - chr1_3:54269422-54269441 Msa0125710:CDS 20.0%
!!! ATAACCTTTTTTGTTTGTTT+TGG - chr1_3:54269645-54269664 Msa0125710:CDS 20.0%
!! AATTCCAAAACAAACAAAAA+AGG + chr1_3:54269652-54269671 None:intergenic 20.0%
!! AATTGAATTCCAAACAAATA+CGG + chr1_3:54269855-54269874 None:intergenic 20.0%
!! AAAAAATGATTAGGCATAAA+GGG + chr1_3:54270987-54271006 None:intergenic 20.0%
!! TAAAAAATGATTAGGCATAA+AGG + chr1_3:54270988-54271007 None:intergenic 20.0%
!! TATGAAGGTAAAAAATGATT+AGG + chr1_3:54270996-54271015 None:intergenic 20.0%
!!! AACAAATTCGCTATTATTTT+AGG + chr1_3:54271808-54271827 None:intergenic 20.0%
!!! AGTCAATAAGTATTGATAAA+GGG + chr1_3:54271912-54271931 None:intergenic 20.0%
!!! TAGTTTTGAACATAATTTTC+AGG - chr1_3:54271979-54271998 Msa0125710:intron 20.0%
!! AAGATACTTTCTTACAATAT+TGG + chr1_3:54272204-54272223 None:intergenic 20.0%
!!! GTAAGAAAGTATCTTATTTT+TGG - chr1_3:54272209-54272228 Msa0125710:intron 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG + chr1_3:54272889-54272908 None:intergenic 20.0%
!!! AAACATTGAGATAATTTTGT+GGG + chr1_3:54273311-54273330 None:intergenic 20.0%
!!! AAAACATTGAGATAATTTTG+TGG + chr1_3:54273312-54273331 None:intergenic 20.0%
!!! TATCTCAATGTTTTTCTAAA+TGG - chr1_3:54273318-54273337 Msa0125710:intron 20.0%
!!! AATATAGTTTTAAGCAAATG+AGG + chr1_3:54273345-54273364 None:intergenic 20.0%
!! TTTAGAAACTATTTCAAAGT+AGG - chr1_3:54273536-54273555 Msa0125710:intron 20.0%
!! TTAGAAACTATTTCAAAGTA+GGG - chr1_3:54273537-54273556 Msa0125710:intron 20.0%
!!! AGAATCAATTTTAGTCTTTA+TGG - chr1_3:54273631-54273650 Msa0125710:intron 20.0%
!!! GATTATGTTAGTTTTCATTT+TGG - chr1_3:54274006-54274025 Msa0125710:intron 20.0%
!! TTTAAAAATTAATAGTTGGC+AGG + chr1_3:54274103-54274122 None:intergenic 20.0%
!! AAGAATGAACTGATAATAAT+TGG - chr1_3:54274234-54274253 Msa0125710:intron 20.0%
!! TTGAATATGATTTACAGTTT+CGG + chr1_3:54274726-54274745 None:intergenic 20.0%
!!! TTTTATTAATTTTTCTCTCG+TGG - chr1_3:54274892-54274911 Msa0125710:intron 20.0%
!! AAGTAAAAGTTTACATAAGT+TGG + chr1_3:54275192-54275211 None:intergenic 20.0%
!!! TATTTTTTTTTTCTTCCTTC+AGG - chr1_3:54275459-54275478 Msa0125710:intron 20.0%
!! GAACAAAGTAAGAAATTAAA+AGG + chr1_3:54276019-54276038 None:intergenic 20.0%
!! CTTACTTTGTTCAATTATAT+TGG - chr1_3:54276027-54276046 Msa0125710:intron 20.0%
!!! TGAACCAAAAATATGAATTT+TGG - chr1_3:54276315-54276334 Msa0125710:CDS 20.0%
!!! TAAGCCAAAATTCATATTTT+TGG + chr1_3:54276322-54276341 None:intergenic 20.0%
!!! GAATAAGATTATGAATCTTT+TGG + chr1_3:54276618-54276637 None:intergenic 20.0%
!! TTATTCAAAATGTATGTGAT+GGG - chr1_3:54276632-54276651 Msa0125710:CDS 20.0%
!! AAAATGCAATATATGTCTAA+GGG + chr1_3:54277022-54277041 None:intergenic 20.0%
!! ATCTTCTAATAATAGATTCA+AGG + chr1_3:54277499-54277518 None:intergenic 20.0%
!!! ACATTATTTTATTACAGGTA+CGG - chr1_3:54277949-54277968 Msa0125710:intron 20.0%
!! AACAAGGAATATAAAACATT+AGG + chr1_3:54278372-54278391 None:intergenic 20.0%
!! TCAAATAACATTATCTAACA+AGG + chr1_3:54278388-54278407 None:intergenic 20.0%
!!! GTATTTTGTTTTTCATTCTT+AGG - chr1_3:54278482-54278501 Msa0125710:intron 20.0%
!!! TTTTAAAATAAATAGTGCAG+TGG + chr1_3:54278952-54278971 None:intergenic 20.0%
!! AAACAACATGAAACAAATAT+TGG + chr1_3:54279000-54279019 None:intergenic 20.0%
!! ACATATAAAGTAACTTTAGA+TGG + chr1_3:54279080-54279099 None:intergenic 20.0%
!! ATATCACAAATTATACTTCA+CGG + chr1_3:54279382-54279401 None:intergenic 20.0%
!! AACCTACAAAAGAAAATTTA+AGG + chr1_3:54279487-54279506 None:intergenic 20.0%
! ATAATTCCTAAACCTTTCAT+CGG + chr1_3:54262515-54262534 None:intergenic 25.0%
!!! TTCTGGATATTTTAATCTTC+CGG - chr1_3:54262642-54262661 Msa0125710:CDS 25.0%
!! TGATTATGTTTTGTGGTTTT+TGG - chr1_3:54262745-54262764 Msa0125710:intron 25.0%
!!! TTTGATTTGTTATGTGTTTC+AGG - chr1_3:54262775-54262794 Msa0125710:intron 25.0%
! TAGTACAGATACTTAACATA+CGG - chr1_3:54262871-54262890 Msa0125710:intron 25.0%
!!! TGATTGTTTGTTACTTTCTT+TGG - chr1_3:54262905-54262924 Msa0125710:intron 25.0%
! ATGGTTTCTGATGTATTTAT+TGG - chr1_3:54262945-54262964 Msa0125710:intron 25.0%
!!! GTATTTATTGGTTTCTGTTA+AGG - chr1_3:54262957-54262976 Msa0125710:intron 25.0%
! ATCTTAAACATCTAAACACA+CGG + chr1_3:54263117-54263136 None:intergenic 25.0%
!!! TACATTCTTTGAAGGATTTT+TGG + chr1_3:54263186-54263205 None:intergenic 25.0%
! AATCCTTCAAAGAATGTAAT+TGG - chr1_3:54263188-54263207 Msa0125710:CDS 25.0%
!! AATATATTTGGGGTATCATT+TGG - chr1_3:54263357-54263376 Msa0125710:intron 25.0%
! AAAGGCAAATTCATTTCATA+TGG + chr1_3:54263427-54263446 None:intergenic 25.0%
! ACTTCTTAAAAGAAAGGTTT+AGG + chr1_3:54263510-54263529 None:intergenic 25.0%
! AATAGCACTTCTTAAAAGAA+AGG + chr1_3:54263516-54263535 None:intergenic 25.0%
!!! GACATCTTTTTTTTTTTGTG+TGG + chr1_3:54263916-54263935 None:intergenic 25.0%
! TCAATTTCAAATATGGAGAA+TGG + chr1_3:54263940-54263959 None:intergenic 25.0%
!! ATTCTCCATATTTGAAATTG+AGG - chr1_3:54263939-54263958 Msa0125710:CDS 25.0%
! GTATTCTTCATTATTCATTC+AGG - chr1_3:54264373-54264392 Msa0125710:CDS 25.0%
!!! CTAAAAATCTTCATTGGTTT+CGG - chr1_3:54264652-54264671 Msa0125710:CDS 25.0%
! AAGATTGATTAAGGCAATAA+GGG + chr1_3:54264682-54264701 None:intergenic 25.0%
!!! TAGTTTCTTTAAAACATCCA+AGG + chr1_3:54264874-54264893 None:intergenic 25.0%
!!! TGGATGTTTTAAAGAAACTA+AGG - chr1_3:54264874-54264893 Msa0125710:intron 25.0%
!!! GGTTTTATTAGAATTGTCTA+AGG - chr1_3:54265014-54265033 Msa0125710:intron 25.0%
! ATTGCATTAACTATATGGTT+TGG + chr1_3:54265494-54265513 None:intergenic 25.0%
! CAACTATTGCATTAACTATA+TGG + chr1_3:54265499-54265518 None:intergenic 25.0%
!! ATTTTATGTAAGATGTTGGA+TGG - chr1_3:54265810-54265829 Msa0125710:intron 25.0%
! ATATCTCGATGTCAAAAATT+TGG - chr1_3:54265853-54265872 Msa0125710:intron 25.0%
! ACTGCTTGATATAAATTCTT+CGG - chr1_3:54266043-54266062 Msa0125710:CDS 25.0%
!!! CAGTATAAAAGTACAGTTTT+GGG + chr1_3:54266133-54266152 None:intergenic 25.0%
!!! TCAGTATAAAAGTACAGTTT+TGG + chr1_3:54266134-54266153 None:intergenic 25.0%
!! TTGTAAAGTATCTTCAACAT+AGG + chr1_3:54266249-54266268 None:intergenic 25.0%
! TTTACAATAATCTCTGATCA+TGG - chr1_3:54266262-54266281 Msa0125710:CDS 25.0%
! TTACAATAATCTCTGATCAT+GGG - chr1_3:54266263-54266282 Msa0125710:CDS 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_3:54266408-54266427 None:intergenic 25.0%
!! TAAAGTATCTTCAACAATGT+TGG + chr1_3:54266650-54266669 None:intergenic 25.0%
! TTTACAATAGTCTCTAATCA+TGG - chr1_3:54266666-54266685 Msa0125710:intron 25.0%
! TTACAATAGTCTCTAATCAT+GGG - chr1_3:54266667-54266686 Msa0125710:intron 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_3:54266408-54266427 None:intergenic 25.0%
! TTAAAACATGGAATAGGAAT+CGG + chr1_3:54267251-54267270 None:intergenic 25.0%
!!! GGGAATATGTTTATTTTTCT+CGG - chr1_3:54267695-54267714 Msa0125710:intron 25.0%
! AAATACAATGTATGGGTTTA+AGG + chr1_3:54267911-54267930 None:intergenic 25.0%
! CTCAGTAAAATACAATGTAT+GGG + chr1_3:54267918-54267937 None:intergenic 25.0%
! TCTCAGTAAAATACAATGTA+TGG + chr1_3:54267919-54267938 None:intergenic 25.0%
! TTACAGTTAATTACAAAGAG+AGG - chr1_3:54268003-54268022 Msa0125710:intron 25.0%
!! TTTTTCTTCCATTCTAATGA+AGG + chr1_3:54268034-54268053 None:intergenic 25.0%
! ATTGTTTAGTAACTTCCTTT+GGG + chr1_3:54268218-54268237 None:intergenic 25.0%
! AATTGTTTAGTAACTTCCTT+TGG + chr1_3:54268219-54268238 None:intergenic 25.0%
! AACAATTGACATGTAACATT+AGG - chr1_3:54268232-54268251 Msa0125710:intron 25.0%
!!! CTAAATCAAATTCTAAGATG+AGG + chr1_3:54268330-54268349 None:intergenic 25.0%
!! CTCATCTTAGAATTTGATTT+AGG - chr1_3:54268328-54268347 Msa0125710:intron 25.0%
! ATTTAGGCCTAAATATATAC+TGG - chr1_3:54268344-54268363 Msa0125710:intron 25.0%
! TTTAGGCCTAAATATATACT+GGG - chr1_3:54268345-54268364 Msa0125710:intron 25.0%
!!! TTTTTCAAATTCTCTTATGC+AGG - chr1_3:54268395-54268414 Msa0125710:intron 25.0%
! TACTAGTCAAAGAAATTAAC+TGG - chr1_3:54268695-54268714 Msa0125710:intron 25.0%
! TGATAATATTGCTGAAGAAA+CGG - chr1_3:54268726-54268745 Msa0125710:intron 25.0%
! TCAAATTGATGAGATAGTAT+CGG - chr1_3:54268909-54268928 Msa0125710:intron 25.0%
!!! TTTGTTTTTTCAAAGTCTAC+TGG + chr1_3:54268965-54268984 None:intergenic 25.0%
! ATTAACAATTTAGAAGTTCG+TGG + chr1_3:54269087-54269106 None:intergenic 25.0%
! AATTGAAATGTAATGATGAC+TGG + chr1_3:54269115-54269134 None:intergenic 25.0%
! TTAATTGAAGATAAACATCC+AGG + chr1_3:54269173-54269192 None:intergenic 25.0%
!!! TGACTTTCTATTTTGATCAA+AGG - chr1_3:54269463-54269482 Msa0125710:intron 25.0%
!! TTTCTTATTTCTTCACTTTC+TGG - chr1_3:54269616-54269635 Msa0125710:CDS 25.0%
! AAAAAACTTGGATAATAGGT+GGG + chr1_3:54270247-54270266 None:intergenic 25.0%
! TAAAAAACTTGGATAATAGG+TGG + chr1_3:54270248-54270267 None:intergenic 25.0%
! CTGTAAAAAACTTGGATAAT+AGG + chr1_3:54270251-54270270 None:intergenic 25.0%
! ATGTACTCCATATCTTAAAT+GGG - chr1_3:54270305-54270324 Msa0125710:intron 25.0%
! ATATACAGTTCCATTGTAAA+TGG - chr1_3:54270373-54270392 Msa0125710:intron 25.0%
!! TATGCTACTTAATCATATGA+TGG - chr1_3:54270789-54270808 Msa0125710:CDS 25.0%
! AGGTAATAGGATATTATGAT+AGG + chr1_3:54271162-54271181 None:intergenic 25.0%
!! ATATACCTGTTTTGCATATT+TGG + chr1_3:54271185-54271204 None:intergenic 25.0%
!!! AATAATAGCGAATTTGTTGA+AGG - chr1_3:54271810-54271829 Msa0125710:intron 25.0%
!!! ATAATAGCGAATTTGTTGAA+GGG - chr1_3:54271811-54271830 Msa0125710:intron 25.0%
!!! ATAAAGGGGATACATTTTTT+TGG + chr1_3:54271897-54271916 None:intergenic 25.0%
!!! GTCAATAAGTATTGATAAAG+GGG + chr1_3:54271911-54271930 None:intergenic 25.0%
!!! GAGTCAATAAGTATTGATAA+AGG + chr1_3:54271913-54271932 None:intergenic 25.0%
! ATTATGTTCAAAACTAAAGC+AGG + chr1_3:54271975-54271994 None:intergenic 25.0%
!! AGAAATACTTGAGTTCATTT+TGG - chr1_3:54272016-54272035 Msa0125710:intron 25.0%
!! GAAATACTTGAGTTCATTTT+GGG - chr1_3:54272017-54272036 Msa0125710:intron 25.0%
! ATCAATGCTGTCTAATTTAA+TGG - chr1_3:54272298-54272317 Msa0125710:intron 25.0%
! TTTCAGTGTTTGAAAATTTC+TGG + chr1_3:54272355-54272374 None:intergenic 25.0%
!! AATTTTCAAACACTGAAACT+AGG - chr1_3:54272357-54272376 Msa0125710:intron 25.0%
! AAATTCAAACTAACAAGCAA+GGG + chr1_3:54272590-54272609 None:intergenic 25.0%
! TAAATTCAAACTAACAAGCA+AGG + chr1_3:54272591-54272610 None:intergenic 25.0%
! TAGTTTGAATTTACTAACCT+TGG - chr1_3:54272598-54272617 Msa0125710:CDS 25.0%
!!! TTGATTTTTTCTTGTATGTC+AGG - chr1_3:54272895-54272914 Msa0125710:intron 25.0%
! ATCATAATTCAATAGCATTG+TGG + chr1_3:54272952-54272971 None:intergenic 25.0%
! ATGCAAGAAAAAATCAATAG+AGG + chr1_3:54273025-54273044 None:intergenic 25.0%
! TTAATTGAGAAAAGACATGT+TGG + chr1_3:54273173-54273192 None:intergenic 25.0%
!! AACATGTCTTTTCTCAATTA+AGG - chr1_3:54273172-54273191 Msa0125710:intron 25.0%
! TTAACTACTATAGAAAAGTG+CGG - chr1_3:54273283-54273302 Msa0125710:intron 25.0%
!! TATGTCTATAGCACATTTTA+GGG + chr1_3:54273397-54273416 None:intergenic 25.0%
! ATGCTTAATCTACAAAATGA+AGG + chr1_3:54273517-54273536 None:intergenic 25.0%
!! GACTAAAATTGATTCTTTCT+GGG + chr1_3:54273627-54273646 None:intergenic 25.0%
!! AGACTAAAATTGATTCTTTC+TGG + chr1_3:54273628-54273647 None:intergenic 25.0%
! AACTATACATCATGAGAAAT+TGG - chr1_3:54273953-54273972 Msa0125710:intron 25.0%
! ATGAAAACTAACATAATCCA+AGG + chr1_3:54274004-54274023 None:intergenic 25.0%
! AAATATAACACCAGAAAAAC+AGG + chr1_3:54274038-54274057 None:intergenic 25.0%
!! TATCAGTTCATTCTTTGAAA+TGG + chr1_3:54274229-54274248 None:intergenic 25.0%
! AATGAACTAAGGATAATTGT+TGG - chr1_3:54274284-54274303 Msa0125710:intron 25.0%
!!! AAGGATAATTGTTGGTTTAA+TGG - chr1_3:54274292-54274311 Msa0125710:intron 25.0%
! CGCTAAGAAGTTTAAATAAA+GGG + chr1_3:54274628-54274647 None:intergenic 25.0%
! TCGCTAAGAAGTTTAAATAA+AGG + chr1_3:54274629-54274648 None:intergenic 25.0%
! ATTGATATTCTTCCAGTTAT+TGG - chr1_3:54275059-54275078 Msa0125710:intron 25.0%
!! ATAAGTTGGAAGATTTAATG+TGG + chr1_3:54275178-54275197 None:intergenic 25.0%
!!! TTTTTCAAGACAATGCTTTT+GGG - chr1_3:54275384-54275403 Msa0125710:intron 25.0%
! ATATATCTATGAAAACCTGA+AGG + chr1_3:54275477-54275496 None:intergenic 25.0%
! AGATGCAGATCATAAAAAAA+TGG + chr1_3:54275589-54275608 None:intergenic 25.0%
! GAACAACAATATAAGTAATG+AGG + chr1_3:54275663-54275682 None:intergenic 25.0%
!! TAACATTTTGTACTATAGAG+TGG - chr1_3:54275741-54275760 Msa0125710:intron 25.0%
!! AACATTTTGTACTATAGAGT+GGG - chr1_3:54275742-54275761 Msa0125710:intron 25.0%
! TCATAAAAGGAAACTAAAGA+AGG + chr1_3:54275821-54275840 None:intergenic 25.0%
!!! ATATAGTTGATGAAATGTGA+TGG - chr1_3:54276171-54276190 Msa0125710:intron 25.0%
! TAAGCAAAACTTTGTTCTTT+AGG - chr1_3:54276233-54276252 Msa0125710:intron 25.0%
! CATTCAATAAATGATGTATG+CGG - chr1_3:54276258-54276277 Msa0125710:intron 25.0%
!! AAGATTATGAATCTTTTGGT+TGG + chr1_3:54276614-54276633 None:intergenic 25.0%
! CTTATTCAAAATGTATGTGA+TGG - chr1_3:54276631-54276650 Msa0125710:CDS 25.0%
! TATTCAAAATGTATGTGATG+GGG - chr1_3:54276633-54276652 Msa0125710:CDS 25.0%
!!! CAATATTTTGAGATAATACG+TGG - chr1_3:54276936-54276955 Msa0125710:intron 25.0%
! GAAAATGCAATATATGTCTA+AGG + chr1_3:54277023-54277042 None:intergenic 25.0%
! CATTGGATCTACTATATATA+GGG - chr1_3:54277095-54277114 Msa0125710:intron 25.0%
! TTTGTCATAAATACACATCT+TGG - chr1_3:54277137-54277156 Msa0125710:intron 25.0%
! TGGTAAACAAATTAAGAGTT+TGG - chr1_3:54277157-54277176 Msa0125710:intron 25.0%
!! TTGCTAAAAGTATGTATTGT+TGG - chr1_3:54277885-54277904 Msa0125710:intron 25.0%
!! TAAAAGTATGTATTGTTGGA+TGG - chr1_3:54277889-54277908 Msa0125710:intron 25.0%
! AACAATTGTGTTTGATATGT+TGG - chr1_3:54278034-54278053 Msa0125710:intron 25.0%
!!! AAGGATTTTTGACTTTTGTT+TGG - chr1_3:54278106-54278125 Msa0125710:intron 25.0%
!!! AGTTCAAAACATTGATTTAG+TGG - chr1_3:54278160-54278179 Msa0125710:intron 25.0%
! TCAATACTCCTTATAAAAAG+AGG + chr1_3:54278248-54278267 None:intergenic 25.0%
!!! TTTTTATAAGGAGTATTGAG+TGG - chr1_3:54278249-54278268 Msa0125710:intron 25.0%
!!! TTTTATAAGGAGTATTGAGT+GGG - chr1_3:54278250-54278269 Msa0125710:intron 25.0%
!! AAAAAGAAGGCTAAGATTTT+GGG - chr1_3:54278776-54278795 Msa0125710:intron 25.0%
! TAAAGTAACTTTAGATGGAA+TGG + chr1_3:54279075-54279094 None:intergenic 25.0%
! TTACTCAAAATAGGAGAAAA+AGG + chr1_3:54279408-54279427 None:intergenic 25.0%
!! ACTTAAGTGTTACTCAAAAT+AGG + chr1_3:54279417-54279436 None:intergenic 25.0%
!! TGCCTTAAATTTTCTTTTGT+AGG - chr1_3:54279482-54279501 Msa0125710:intron 25.0%
! AACATATTATGGCCATTTAA+AGG - chr1_3:54279797-54279816 Msa0125710:five_prime_UTR 25.0%
AAGGAAGAATTGAGAAGTTA+GGG + chr1_3:54262164-54262183 None:intergenic 30.0%
TCTATCCAATTCTTTACTCT+GGG + chr1_3:54262557-54262576 None:intergenic 30.0%
AGAGTAAAGAATTGGATAGA+GGG - chr1_3:54262557-54262576 Msa0125710:CDS 30.0%
CCAGAAAGTAGTTTCAAATA+CGG + chr1_3:54262628-54262647 None:intergenic 30.0%
! TGTATGGTGATTATGTTTTG+TGG - chr1_3:54262738-54262757 Msa0125710:intron 30.0%
!! TATTGGTTTCTGTTAAGGAA+TGG - chr1_3:54262962-54262981 Msa0125710:intron 30.0%
TTCTGTTAAGGAATGGTATA+TGG - chr1_3:54262969-54262988 Msa0125710:intron 30.0%
TCTGTTAAGGAATGGTATAT+GGG - chr1_3:54262970-54262989 Msa0125710:intron 30.0%
TCTTAAACATCTAAACACAC+GGG + chr1_3:54263116-54263135 None:intergenic 30.0%
!! TTCTTTGAAGGATTTTTGGA+TGG + chr1_3:54263182-54263201 None:intergenic 30.0%
AAGCCAATTACATTCTTTGA+AGG + chr1_3:54263194-54263213 None:intergenic 30.0%
ATATATCCTTTCGTGAATTC+TGG - chr1_3:54263275-54263294 Msa0125710:intron 30.0%
!! CTTTTGGTTATTTGGTTACT+CGG - chr1_3:54263396-54263415 Msa0125710:intron 30.0%
!! TTTTGGTTATTTGGTTACTC+GGG - chr1_3:54263397-54263416 Msa0125710:intron 30.0%
TAATTCTCTTGTAGCTAAGT+TGG - chr1_3:54263484-54263503 Msa0125710:intron 30.0%
!!! CTTTTAAGAAGTGCTATTCA+CGG - chr1_3:54263518-54263537 Msa0125710:intron 30.0%
TGATTCTACGGTTGATTATA+TGG - chr1_3:54263601-54263620 Msa0125710:CDS 30.0%
! CTTGTTTGATATTGCTATTC+CGG + chr1_3:54263646-54263665 None:intergenic 30.0%
!! TCTGTACAATTTTGCTATGA+AGG - chr1_3:54263731-54263750 Msa0125710:CDS 30.0%
GACAATGCATTATATATGCA+AGG - chr1_3:54263871-54263890 Msa0125710:CDS 30.0%
!!! TCTTTTTTTTTTTGTGTGGC+CGG + chr1_3:54263912-54263931 None:intergenic 30.0%
TTCCTCCTCAATTTCAAATA+TGG + chr1_3:54263947-54263966 None:intergenic 30.0%
TTCTCAAACACACATGTTTA+AGG - chr1_3:54264022-54264041 Msa0125710:intron 30.0%
ATGTTCTTTGGTCTATTTGA+CGG + chr1_3:54264076-54264095 None:intergenic 30.0%
!!! ATATCTATCATCTGGCTTTT+TGG - chr1_3:54264130-54264149 Msa0125710:CDS 30.0%
AAGGTCTATGTTAGTAAACT+TGG - chr1_3:54264185-54264204 Msa0125710:CDS 30.0%
! TAAACTATAAATTTGAGGCC+AGG + chr1_3:54264336-54264355 None:intergenic 30.0%
ACAGAATCTAAGAACAAGAT+TGG + chr1_3:54264403-54264422 None:intergenic 30.0%
AATGACAATAGTTCAACAGA+AGG + chr1_3:54264516-54264535 None:intergenic 30.0%
! TGTTGAACTATTGTCATTTC+AGG - chr1_3:54264518-54264537 Msa0125710:CDS 30.0%
ATCAAACCATTCAAAAGTGA+TGG + chr1_3:54264594-54264613 None:intergenic 30.0%
CAAGATTGATTAAGGCAATA+AGG + chr1_3:54264683-54264702 None:intergenic 30.0%
TGACAGAACAAGAAGAAAAT+AGG + chr1_3:54264765-54264784 None:intergenic 30.0%
TTATCACCTGCAGATAATTA+GGG + chr1_3:54265079-54265098 None:intergenic 30.0%
ATTATCACCTGCAGATAATT+AGG + chr1_3:54265080-54265099 None:intergenic 30.0%
TATGATCATTTGCAGTTCTA+AGG - chr1_3:54265165-54265184 Msa0125710:CDS 30.0%
TGATGAACAGAGTCATTTAT+GGG + chr1_3:54265235-54265254 None:intergenic 30.0%
ATGATGAACAGAGTCATTTA+TGG + chr1_3:54265236-54265255 None:intergenic 30.0%
!! ATAGTTTCACACAAGTTGAT+AGG + chr1_3:54265273-54265292 None:intergenic 30.0%
GTGAAACTATCAGAAAAAGT+TGG - chr1_3:54265283-54265302 Msa0125710:intron 30.0%
TCATTCAAATGTCAATTAGC+TGG - chr1_3:54265575-54265594 Msa0125710:intron 30.0%
TCGATGTCAAAAATTTGGTT+TGG - chr1_3:54265858-54265877 Msa0125710:intron 30.0%
CTGCTTGATATAAATTCTTC+GGG - chr1_3:54266044-54266063 Msa0125710:CDS 30.0%
!!! TATAAAAGTACAGTTTTGGG+AGG + chr1_3:54266130-54266149 None:intergenic 30.0%
CAAAAAAAAAATCAGCCCAT+AGG + chr1_3:54266206-54266225 None:intergenic 30.0%
TACAATAATCTCTGATCATG+GGG - chr1_3:54266264-54266283 Msa0125710:CDS 30.0%
! AAAATGTGAAGCAACCTTTT+CGG + chr1_3:54266333-54266352 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_3:54266393-54266412 None:intergenic 30.0%
TACAATAGTCTCTAATCATG+GGG - chr1_3:54266668-54266687 Msa0125710:intron 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_3:54266393-54266412 None:intergenic 30.0%
TGATAGAAGACTTGATTATG+TGG - chr1_3:54266923-54266942 Msa0125710:CDS 30.0%
ATTATGTGGTGTACAAAGTA+GGG - chr1_3:54266937-54266956 Msa0125710:CDS 30.0%
ATGGGGTAATCTTCATAAAT+TGG - chr1_3:54267111-54267130 Msa0125710:intron 30.0%
TCGGTTATGCACAATAATAA+TGG + chr1_3:54267232-54267251 None:intergenic 30.0%
AACGGTATAGTTAAATGGTT+GGG + chr1_3:54267277-54267296 None:intergenic 30.0%
!! ACAAAACATTTTGGGTAGAA+CGG + chr1_3:54267295-54267314 None:intergenic 30.0%
! CCTGATCAACAAAACATTTT+GGG + chr1_3:54267303-54267322 None:intergenic 30.0%
!! CCAAAATGTTTTGTTGATCA+GGG - chr1_3:54267301-54267320 Msa0125710:CDS 30.0%
ATCATCAAACTGTCTCAATA+TGG + chr1_3:54267347-54267366 None:intergenic 30.0%
TTGGAACATAACATGTATGT+TGG + chr1_3:54267571-54267590 None:intergenic 30.0%
GTTATGTTCCAAAGTGAATA+TGG - chr1_3:54267579-54267598 Msa0125710:CDS 30.0%
! TTCCTGTTCTTTTTGATGAA+TGG - chr1_3:54267832-54267851 Msa0125710:intron 30.0%
! TAGTACCAAATTGATGACTA+TGG - chr1_3:54267955-54267974 Msa0125710:intron 30.0%
TAACACCATAGTCATCAATT+TGG + chr1_3:54267963-54267982 None:intergenic 30.0%
GCTGAGAAATAAATGATTGT+TGG - chr1_3:54268119-54268138 Msa0125710:intron 30.0%
AATAAATGATTGTTGGACCA+AGG - chr1_3:54268126-54268145 Msa0125710:intron 30.0%
TAAATCACCAATTGTATGCA+GGG + chr1_3:54268375-54268394 None:intergenic 30.0%
ATAAATCACCAATTGTATGC+AGG + chr1_3:54268376-54268395 None:intergenic 30.0%
!! AAGGAGTAATGGATAAATCA+TGG + chr1_3:54268519-54268538 None:intergenic 30.0%
! AAATCTTTCTTTTCAACCTG+TGG + chr1_3:54268548-54268567 None:intergenic 30.0%
TTCAGATTTATGCTTTGTCT+TGG - chr1_3:54268609-54268628 Msa0125710:intron 30.0%
GGACTTAAATTTAAAAGCTC+TGG - chr1_3:54268672-54268691 Msa0125710:intron 30.0%
! GCTTTTCTAATAACAGACTT+CGG + chr1_3:54268820-54268839 None:intergenic 30.0%
! GACTGATTCTATATTCATCT+TGG + chr1_3:54268935-54268954 None:intergenic 30.0%
AGTCAAACTTATAGTATGTC+AGG + chr1_3:54269018-54269037 None:intergenic 30.0%
CATACTATAAGTTTGACTGT+AGG - chr1_3:54269020-54269039 Msa0125710:intron 30.0%
TATAAGTTTGACTGTAGGAA+TGG - chr1_3:54269025-54269044 Msa0125710:intron 30.0%
CTTGAAGGTTATCGAAAAAT+TGG - chr1_3:54269193-54269212 Msa0125710:intron 30.0%
AATCGATATTATCTTCATGG+TGG + chr1_3:54269235-54269254 None:intergenic 30.0%
ACCATGAAGATAATATCGAT+TGG - chr1_3:54269234-54269253 Msa0125710:CDS 30.0%
ACCAATCGATATTATCTTCA+TGG + chr1_3:54269238-54269257 None:intergenic 30.0%
! GACAAAGAAAACAAACCTTT+TGG + chr1_3:54269341-54269360 None:intergenic 30.0%
TACATAACGACACAAACAAA+TGG - chr1_3:54269389-54269408 Msa0125710:intron 30.0%
!! CACAAACAAATGGATTAGTT+AGG - chr1_3:54269399-54269418 Msa0125710:CDS 30.0%
! TGAAGTGTTAGACTTAAACT+CGG - chr1_3:54269688-54269707 Msa0125710:intron 30.0%
ACCTCTAAATGCAAAAGTTA+TGG - chr1_3:54269753-54269772 Msa0125710:intron 30.0%
!! AAGTTATGGCTTGCATATTT+TGG - chr1_3:54269767-54269786 Msa0125710:intron 30.0%
TAATTCCTTCCGTATTTGTT+TGG - chr1_3:54269843-54269862 Msa0125710:intron 30.0%
! GGAATTCAATTTTGTCTTAG+TGG - chr1_3:54269864-54269883 Msa0125710:intron 30.0%
CAACATTTGAAGAACATAAG+AGG + chr1_3:54270058-54270077 None:intergenic 30.0%
! TTTTTCGCTTTGTCAAAGTT+CGG - chr1_3:54270171-54270190 Msa0125710:intron 30.0%
GATGTACTCCATATCTTAAA+TGG - chr1_3:54270304-54270323 Msa0125710:intron 30.0%
!!! TTTTGTTGCTCTTATTTTCC+AGG - chr1_3:54270463-54270482 Msa0125710:intron 30.0%
TAATTATAGAACATGTCACC+TGG + chr1_3:54270484-54270503 None:intergenic 30.0%
! TTTTGAATCTTTTCCTGTGT+AGG - chr1_3:54270546-54270565 Msa0125710:intron 30.0%
! TGGATGTCAAACTGATATTT+TGG - chr1_3:54270635-54270654 Msa0125710:intron 30.0%
AACAAGAAGAGAAGGAAATT+CGG + chr1_3:54270661-54270680 None:intergenic 30.0%
TATATATGGTTGTGGACAAA+TGG - chr1_3:54270747-54270766 Msa0125710:CDS 30.0%
!! TCTTGATTTTTGAGGAAATC+TGG - chr1_3:54270818-54270837 Msa0125710:CDS 30.0%
AAATTCTTTGCAGTCTGTAA+GGG - chr1_3:54270871-54270890 Msa0125710:CDS 30.0%
TAACTTAACAATACACTCCA+TGG + chr1_3:54270903-54270922 None:intergenic 30.0%
TTTGCATATTTGGAGGTAAT+AGG + chr1_3:54271175-54271194 None:intergenic 30.0%
ATAGTTGTGTTGTGATAAAG+TGG + chr1_3:54271240-54271259 None:intergenic 30.0%
AGATCTTTCAAATGTGTAGA+GGG - chr1_3:54271305-54271324 Msa0125710:CDS 30.0%
! CTCAAATACTTTAAAAAGCC+AGG + chr1_3:54271395-54271414 None:intergenic 30.0%
! TTGCTAAGAAAGTACAGATT+AGG - chr1_3:54271428-54271447 Msa0125710:intron 30.0%
! TGCTAAGAAAGTACAGATTA+GGG - chr1_3:54271429-54271448 Msa0125710:intron 30.0%
AAAGTACAGATTAGGGTTTA+GGG - chr1_3:54271436-54271455 Msa0125710:intron 30.0%
!! TAAGTTTTAACATGCAAGTG+GGG + chr1_3:54271745-54271764 None:intergenic 30.0%
!! GTAAGTTTTAACATGCAAGT+GGG + chr1_3:54271746-54271765 None:intergenic 30.0%
!! AGTAAGTTTTAACATGCAAG+TGG + chr1_3:54271747-54271766 None:intergenic 30.0%
TTGCATGTTAAAACTTACTG+TGG - chr1_3:54271748-54271767 Msa0125710:CDS 30.0%
AGGGTAATTTCCTAAAGTAA+TGG - chr1_3:54271830-54271849 Msa0125710:intron 30.0%
CAACAAAATGCCATTACTTT+AGG + chr1_3:54271843-54271862 None:intergenic 30.0%
! AAGTAATGGCATTTTGTTGA+AGG - chr1_3:54271844-54271863 Msa0125710:intron 30.0%
! AGTAATGGCATTTTGTTGAA+GGG - chr1_3:54271845-54271864 Msa0125710:intron 30.0%
!!! AGTTCATTTTGGGTTATACT+GGG - chr1_3:54272027-54272046 Msa0125710:intron 30.0%
ACACACTAAGCTATTAAATC+TGG + chr1_3:54272165-54272184 None:intergenic 30.0%
AGATTTAATAGCTTAGTGTG+TGG - chr1_3:54272164-54272183 Msa0125710:CDS 30.0%
GATTTAATAGCTTAGTGTGT+GGG - chr1_3:54272165-54272184 Msa0125710:CDS 30.0%
!!! TTTTTGGGCATTGATTTCTA+TGG - chr1_3:54272225-54272244 Msa0125710:intron 30.0%
!!! GACAGCATTGATGATATTTT+AGG + chr1_3:54272290-54272309 None:intergenic 30.0%
GAGCGATACTATAATAAACA+CGG - chr1_3:54272320-54272339 Msa0125710:intron 30.0%
TCAGAGCTAAGACATAATAT+TGG + chr1_3:54272415-54272434 None:intergenic 30.0%
GCTTAATAGTCAATTCTACA+CGG - chr1_3:54272699-54272718 Msa0125710:CDS 30.0%
CTTAATAGTCAATTCTACAC+GGG - chr1_3:54272700-54272719 Msa0125710:CDS 30.0%
TTAATAGTCAATTCTACACG+GGG - chr1_3:54272701-54272720 Msa0125710:CDS 30.0%
!!! TTGATTTTTTCTTGCATGTC+AGG - chr1_3:54273028-54273047 Msa0125710:intron 30.0%
! AAATGTGAGTTTCTTGCTTT+TGG - chr1_3:54273136-54273155 Msa0125710:intron 30.0%
!! CTTTTGTTTGTTTTCCTCTT+CGG - chr1_3:54273197-54273216 Msa0125710:CDS 30.0%
CCACTAAAGAAATACAAAAC+AGG + chr1_3:54273225-54273244 None:intergenic 30.0%
! CCTGTTTTGTATTTCTTTAG+TGG - chr1_3:54273222-54273241 Msa0125710:CDS 30.0%
! CTATGTCTATAGCACATTTT+AGG + chr1_3:54273398-54273417 None:intergenic 30.0%
!!! TCTGCAATTGGCTTATTTTA+GGG + chr1_3:54273426-54273445 None:intergenic 30.0%
ACTAGAAAAGGAAATTGATC+AGG + chr1_3:54273663-54273682 None:intergenic 30.0%
TCTGACAAATCAATTGACTA+TGG - chr1_3:54273791-54273810 Msa0125710:intron 30.0%
! TTCCAAATATGTTTTCGTAG+AGG - chr1_3:54273825-54273844 Msa0125710:intron 30.0%
TTCCTCTACGAAAACATATT+TGG + chr1_3:54273830-54273849 None:intergenic 30.0%
CATGAAATGTGAAAATATGC+CGG - chr1_3:54273895-54273914 Msa0125710:intron 30.0%
ATGAAATGTGAAAATATGCC+GGG - chr1_3:54273896-54273915 Msa0125710:intron 30.0%
! CCTTAGTTCATTCTTTGAAA+TGG + chr1_3:54274276-54274295 None:intergenic 30.0%
CCATTTCAAAGAATGAACTA+AGG - chr1_3:54274273-54274292 Msa0125710:intron 30.0%
CAGATAGATTTCAAAACTGT+TGG - chr1_3:54274320-54274339 Msa0125710:intron 30.0%
CATATGCAGAATAGATAATC+TGG - chr1_3:54274445-54274464 Msa0125710:intron 30.0%
CAGTAACAAAACATCAAGAA+GGG + chr1_3:54274486-54274505 None:intergenic 30.0%
TCAGTAACAAAACATCAAGA+AGG + chr1_3:54274487-54274506 None:intergenic 30.0%
TGAAGAAAGACATAACAAAC+AGG - chr1_3:54274504-54274523 Msa0125710:CDS 30.0%
!! CGAAGTATTTTCAGAAGAAT+GGG - chr1_3:54274646-54274665 Msa0125710:intron 30.0%
CAGAAAGCAGAGAAAATATA+TGG + chr1_3:54274998-54275017 None:intergenic 30.0%
!! TCTTACCAGAAAAAGTGTTT+GGG - chr1_3:54275030-54275049 Msa0125710:intron 30.0%
! AATCCTTGATTTTCATGCTT+GGG - chr1_3:54275151-54275170 Msa0125710:intron 30.0%
CACATACATAAACACATAAG+TGG + chr1_3:54275260-54275279 None:intergenic 30.0%
TCATTCAAAGCATGTATTTG+AGG - chr1_3:54275291-54275310 Msa0125710:intron 30.0%
!!! GTTTTTCAAGACAATGCTTT+TGG - chr1_3:54275383-54275402 Msa0125710:intron 30.0%
!! AATCATGTATAAAGTACCGT+AGG + chr1_3:54275546-54275565 None:intergenic 30.0%
AATGGTGAAGTTACAATACT+AGG + chr1_3:54275571-54275590 None:intergenic 30.0%
TTATGATCTGCATCTTACAA+TGG - chr1_3:54275594-54275613 Msa0125710:intron 30.0%
! GTACAAAATGTTAAAGCATC+TGG + chr1_3:54275734-54275753 None:intergenic 30.0%
AACAGTATACAAGTATGACT+TGG - chr1_3:54275792-54275811 Msa0125710:intron 30.0%
ATTTCCTCTCTGTTCATAAA+AGG + chr1_3:54275834-54275853 None:intergenic 30.0%
! TCTAGTTTGAACAACAATTC+AGG + chr1_3:54275929-54275948 None:intergenic 30.0%
! TTGTTGTTCAAACTAGAATC+AGG - chr1_3:54275932-54275951 Msa0125710:intron 30.0%
TTGTTGCATTATTTGTGATC+TGG + chr1_3:54275987-54276006 None:intergenic 30.0%
TATTAATGCTAAAGCAGTCT+TGG - chr1_3:54276393-54276412 Msa0125710:intron 30.0%
GAATAAGATTGTGATATCAG+TGG - chr1_3:54276522-54276541 Msa0125710:intron 30.0%
TCTTGTAGATGCAAGAAAAA+AGG - chr1_3:54276712-54276731 Msa0125710:CDS 30.0%
TAAATTTCTCTGTCATTGTG+AGG - chr1_3:54276738-54276757 Msa0125710:CDS 30.0%
TGTTGTGAGGAATATAACAA+TGG - chr1_3:54276787-54276806 Msa0125710:intron 30.0%
GATCATTCAGATAAAGATGT+TGG - chr1_3:54276854-54276873 Msa0125710:CDS 30.0%
AGATAAAGATGTTGGAGAAA+AGG - chr1_3:54276862-54276881 Msa0125710:CDS 30.0%
! ACATATTTTACCTATGCCAT+TGG - chr1_3:54277078-54277097 Msa0125710:CDS 30.0%
CCTATATATAGTAGATCCAA+TGG + chr1_3:54277097-54277116 None:intergenic 30.0%
CCATTGGATCTACTATATAT+AGG - chr1_3:54277094-54277113 Msa0125710:intron 30.0%
AACAAGAACAGAAACAAGAT+GGG + chr1_3:54277696-54277715 None:intergenic 30.0%
TAACAAGAACAGAAACAAGA+TGG + chr1_3:54277697-54277716 None:intergenic 30.0%
! TGTTTCTGTTCTTGTTACTT+TGG - chr1_3:54277700-54277719 Msa0125710:intron 30.0%
AAAAAATATCATGGAGCTTC+TGG - chr1_3:54277766-54277785 Msa0125710:intron 30.0%
! GTTGGGTATATTTCTAACAA+TGG + chr1_3:54277987-54278006 None:intergenic 30.0%
GATATGTTGGCAACATTTAT+TGG - chr1_3:54278047-54278066 Msa0125710:intron 30.0%
AAAAGTCAAAAATCCTTCCA+TGG + chr1_3:54278103-54278122 None:intergenic 30.0%
!! TCAATGTTTTGAACTGAATG+AGG + chr1_3:54278155-54278174 None:intergenic 30.0%
!! AACATTGATTTAGTGGAAGA+AGG - chr1_3:54278167-54278186 Msa0125710:intron 30.0%
! TGTTCAAGCCTCTTTTTATA+AGG - chr1_3:54278237-54278256 Msa0125710:intron 30.0%
! AGTCAAAAGACACTTTGTTT+AGG - chr1_3:54278435-54278454 Msa0125710:intron 30.0%
! CATATCCTTTTCTCATTTCT+AGG - chr1_3:54278657-54278676 Msa0125710:CDS 30.0%
AATGACCTAGAAATGAGAAA+AGG + chr1_3:54278665-54278684 None:intergenic 30.0%
! CTAAGCAAGTATTTGAAGTA+AGG + chr1_3:54278695-54278714 None:intergenic 30.0%
! GAAAAAGAAGGCTAAGATTT+TGG - chr1_3:54278775-54278794 Msa0125710:intron 30.0%
AAAAATTCACTCGATGAAAC+GGG + chr1_3:54279029-54279048 None:intergenic 30.0%
CAAAAATTCACTCGATGAAA+CGG + chr1_3:54279030-54279049 None:intergenic 30.0%
!! AGATCAAGTTGAGAAACAAT+AGG + chr1_3:54279230-54279249 None:intergenic 30.0%
AAAAATTTGTAAGCTGCAAG+AGG + chr1_3:54279462-54279481 None:intergenic 30.0%
!! CTTCTTTCAAGTTATCTACA+AGG + chr1_3:54279575-54279594 None:intergenic 30.0%
GTAGACCAATGAACATATTA+TGG - chr1_3:54279786-54279805 Msa0125710:five_prime_UTR 30.0%
AATGGCCATAATATGTTCAT+TGG + chr1_3:54279794-54279813 None:intergenic 30.0%
ATTATGGCCATTTAAAGGAA+AGG - chr1_3:54279802-54279821 Msa0125710:five_prime_UTR 30.0%
TTAGAGGAAATTTCAGTTGG+CGG - chr1_3:54262029-54262048 Msa0125710:three_prime_UTR 35.0%
GAATTGAGAAGTTAGGGTTA+GGG + chr1_3:54262158-54262177 None:intergenic 35.0%
AGAATTGAGAAGTTAGGGTT+AGG + chr1_3:54262159-54262178 None:intergenic 35.0%
GAAGGAAGAATTGAGAAGTT+AGG + chr1_3:54262165-54262184 None:intergenic 35.0%
! TTGCTAGAATTTTGCGATGA+AGG + chr1_3:54262183-54262202 None:intergenic 35.0%
TCATCGCAAAATTCTAGCAA+TGG - chr1_3:54262183-54262202 Msa0125710:three_prime_UTR 35.0%
TTAGGATCGAACAAGATAGA+AGG + chr1_3:54262292-54262311 None:intergenic 35.0%
!!! TGAGTTTTTGGTTGTGTTTC+AGG - chr1_3:54262469-54262488 Msa0125710:intron 35.0%
!! TTTTGGTTGTGTTTCAGGAT+TGG - chr1_3:54262474-54262493 Msa0125710:intron 35.0%
CTATCCAATTCTTTACTCTG+GGG + chr1_3:54262556-54262575 None:intergenic 35.0%
CTCTATCCAATTCTTTACTC+TGG + chr1_3:54262558-54262577 None:intergenic 35.0%
CAGAGTAAAGAATTGGATAG+AGG - chr1_3:54262556-54262575 Msa0125710:CDS 35.0%
! CCGTATTTGAAACTACTTTC+TGG - chr1_3:54262625-54262644 Msa0125710:CDS 35.0%
GGTTGTGTTGTGAATTGTAA+TGG - chr1_3:54262926-54262945 Msa0125710:intron 35.0%
GGTATATGGGAGTTTCTTAA+AGG - chr1_3:54262983-54263002 Msa0125710:intron 35.0%
! TCTTAAAGGTGTGAAAGACT+CGG - chr1_3:54262997-54263016 Msa0125710:intron 35.0%
!! TGCTGTTGTTGTTGAAGTTT+TGG - chr1_3:54263220-54263239 Msa0125710:CDS 35.0%
!! GCTGTTGTTGTTGAAGTTTT+GGG - chr1_3:54263221-54263240 Msa0125710:CDS 35.0%
TCTGAAAGATCCTTCTTATC+AGG + chr1_3:54263308-54263327 None:intergenic 35.0%
! ATATTTGGGGTATCATTTGG+TGG - chr1_3:54263360-54263379 Msa0125710:intron 35.0%
!! GTGATGACCTTTTGGTTATT+TGG - chr1_3:54263388-54263407 Msa0125710:intron 35.0%
CGAGTAACCAAATAACCAAA+AGG + chr1_3:54263398-54263417 None:intergenic 35.0%
TAAATGGATCTTGACATGAG+GGG + chr1_3:54263453-54263472 None:intergenic 35.0%
GTAAATGGATCTTGACATGA+GGG + chr1_3:54263454-54263473 None:intergenic 35.0%
TGTAAATGGATCTTGACATG+AGG + chr1_3:54263455-54263474 None:intergenic 35.0%
AATAACCAAATCCACATAGC+TGG - chr1_3:54263671-54263690 Msa0125710:CDS 35.0%
CAATAAAACAACAACCACTC+AGG + chr1_3:54263702-54263721 None:intergenic 35.0%
TGCATTATATATGCAAGGTC+CGG - chr1_3:54263876-54263895 Msa0125710:CDS 35.0%
!!! TTTTTTTTTTTGTGTGGCCG+GGG + chr1_3:54263910-54263929 None:intergenic 35.0%
!!! CTTTTTTTTTTTGTGTGGCC+GGG + chr1_3:54263911-54263930 None:intergenic 35.0%
! CTCCATATTTGAAATTGAGG+AGG - chr1_3:54263942-54263961 Msa0125710:CDS 35.0%
!! TTTGAGAAACAGTTGGTTTG+TGG + chr1_3:54264010-54264029 None:intergenic 35.0%
ATGTGTGTTTGAGAAACAGT+TGG + chr1_3:54264017-54264036 None:intergenic 35.0%
TGTTCTTTGGTCTATTTGAC+GGG + chr1_3:54264075-54264094 None:intergenic 35.0%
ACACAGTGAATGATGTTCTT+TGG + chr1_3:54264088-54264107 None:intergenic 35.0%
CTAACATAGACCTTCCTAAT+GGG + chr1_3:54264179-54264198 None:intergenic 35.0%
ACTAACATAGACCTTCCTAA+TGG + chr1_3:54264180-54264199 None:intergenic 35.0%
GTCTATGTTAGTAAACTTGG+AGG - chr1_3:54264188-54264207 Msa0125710:CDS 35.0%
! AGTAAACTTGGAGGTATAGT+TGG - chr1_3:54264197-54264216 Msa0125710:CDS 35.0%
! GTAAACTTGGAGGTATAGTT+GGG - chr1_3:54264198-54264217 Msa0125710:CDS 35.0%
ATACATGTTCAGTTATAGGG+AGG - chr1_3:54264245-54264264 Msa0125710:CDS 35.0%
TACATGTTCAGTTATAGGGA+GGG - chr1_3:54264246-54264265 Msa0125710:CDS 35.0%
TGTGAAAAGGGGAATAAAAG+AGG - chr1_3:54264272-54264291 Msa0125710:CDS 35.0%
!! TTGATGATAGTTTGCTTGCT+TGG - chr1_3:54264549-54264568 Msa0125710:CDS 35.0%
!! TTAGCTCCATCACTTTTGAA+TGG - chr1_3:54264585-54264604 Msa0125710:CDS 35.0%
AGGAGGCTAAAAATCTTCAT+TGG - chr1_3:54264646-54264665 Msa0125710:CDS 35.0%
TACCTGGACAAGATTGATTA+AGG + chr1_3:54264691-54264710 None:intergenic 35.0%
!! TGGAAGTGTGTCAACATTTT+GGG + chr1_3:54264844-54264863 None:intergenic 35.0%
!! TTGGAAGTGTGTCAACATTT+TGG + chr1_3:54264845-54264864 None:intergenic 35.0%
! TCAAACTGCTCAACTTTTTG+AGG - chr1_3:54264906-54264925 Msa0125710:intron 35.0%
GGCAAATCCCTATAAGAAAA+AGG + chr1_3:54264991-54265010 None:intergenic 35.0%
! TTTTCTTATAGGGATTTGCC+TGG - chr1_3:54264991-54265010 Msa0125710:intron 35.0%
TTTCTTATAGGGATTTGCCT+GGG - chr1_3:54264992-54265011 Msa0125710:intron 35.0%
GACAATTCTAATAAAACCCC+AGG + chr1_3:54265012-54265031 None:intergenic 35.0%
AAAGTTTCTCGTTGTTCTGT+TGG - chr1_3:54265050-54265069 Msa0125710:intron 35.0%
! TTTGCTGTCCTTGATAGAAA+AGG - chr1_3:54265207-54265226 Msa0125710:CDS 35.0%
GATGAACAGAGTCATTTATG+GGG + chr1_3:54265234-54265253 None:intergenic 35.0%
AAATGACTCTGTTCATCATG+TGG - chr1_3:54265237-54265256 Msa0125710:CDS 35.0%
TTGGAAATGGATCTGATGAA+CGG - chr1_3:54265381-54265400 Msa0125710:intron 35.0%
GCATCAAATGATATTTGACC+AGG + chr1_3:54265525-54265544 None:intergenic 35.0%
! AGCAGTTCATCATTTTCTTC+AGG - chr1_3:54265655-54265674 Msa0125710:intron 35.0%
TTCAATAGAAAGTCAGTGTG+TGG + chr1_3:54265903-54265922 None:intergenic 35.0%
AACAAGAGAATACACACTTC+AGG + chr1_3:54265943-54265962 None:intergenic 35.0%
! AAACAAGGCATTTGTTTCAG+AGG - chr1_3:54266076-54266095 Msa0125710:CDS 35.0%
AAGTCATTCCACATAATCGT+TGG - chr1_3:54266475-54266494 Msa0125710:intron 35.0%
AGTCATTCCACATAATCGTT+GGG - chr1_3:54266476-54266495 Msa0125710:intron 35.0%
GATTATGTGGTGTACAAAGT+AGG - chr1_3:54266936-54266955 Msa0125710:CDS 35.0%
TTATGTGGTGTACAAAGTAG+GGG - chr1_3:54266938-54266957 Msa0125710:CDS 35.0%
!! AGCTGATTTGAAGTTGACAT+GGG - chr1_3:54267093-54267112 Msa0125710:intron 35.0%
! GTCAAAGCTTTAGTTGTGTT+GGG - chr1_3:54267133-54267152 Msa0125710:CDS 35.0%
! GGGGATTTAAAACATGGAAT+AGG + chr1_3:54267257-54267276 None:intergenic 35.0%
! ATGGTTGGGGATTTAAAACA+TGG + chr1_3:54267263-54267282 None:intergenic 35.0%
ACGGTATAGTTAAATGGTTG+GGG + chr1_3:54267276-54267295 None:intergenic 35.0%
GAACGGTATAGTTAAATGGT+TGG + chr1_3:54267278-54267297 None:intergenic 35.0%
GGTAGAACGGTATAGTTAAA+TGG + chr1_3:54267282-54267301 None:intergenic 35.0%
!! CCCAAAATGTTTTGTTGATC+AGG - chr1_3:54267300-54267319 Msa0125710:CDS 35.0%
! CCCTGATCAACAAAACATTT+TGG + chr1_3:54267304-54267323 None:intergenic 35.0%
TCAAGAAGCTTAGAAGAATC+TGG + chr1_3:54267424-54267443 None:intergenic 35.0%
AGATTCTTCTAAGCTTCTTG+AGG - chr1_3:54267423-54267442 Msa0125710:CDS 35.0%
AATGTGCTAAGAAGATGTGT+TGG - chr1_3:54267454-54267473 Msa0125710:CDS 35.0%
CTCTATGCATGATAGAAAGA+TGG + chr1_3:54267783-54267802 None:intergenic 35.0%
AGCCATTCATCAAAAAGAAC+AGG + chr1_3:54267837-54267856 None:intergenic 35.0%
! TGTTCTTTTTGATGAATGGC+TGG - chr1_3:54267836-54267855 Msa0125710:intron 35.0%
AGCAGCATAATAAAGTTCAG+AGG + chr1_3:54268091-54268110 None:intergenic 35.0%
AGCAAGAGCTTAACTAGATT+GGG + chr1_3:54268152-54268171 None:intergenic 35.0%
AAGCAAGAGCTTAACTAGAT+TGG + chr1_3:54268153-54268172 None:intergenic 35.0%
TATTCCCTAACAAAACCCAA+AGG - chr1_3:54268200-54268219 Msa0125710:intron 35.0%
!!! ACTTCCTTTGGGTTTTGTTA+GGG + chr1_3:54268207-54268226 None:intergenic 35.0%
!!! AACTTCCTTTGGGTTTTGTT+AGG + chr1_3:54268208-54268227 None:intergenic 35.0%
ACCAGCAAGACTAACATTAT+CGG + chr1_3:54268426-54268445 None:intergenic 35.0%
! CTGATCATGGAAGTATGATA+TGG + chr1_3:54268477-54268496 None:intergenic 35.0%
ATACTTCCATGATCAGTACT+TGG - chr1_3:54268481-54268500 Msa0125710:intron 35.0%
TAAGTAAGAACACGCAAAGT+CGG + chr1_3:54268580-54268599 None:intergenic 35.0%
CAATAAGAGAAGTAATCGTC+AGG + chr1_3:54268644-54268663 None:intergenic 35.0%
AGAAACGGTTAGTAACTACA+TGG - chr1_3:54268741-54268760 Msa0125710:intron 35.0%
GAAACGGTTAGTAACTACAT+GGG - chr1_3:54268742-54268761 Msa0125710:intron 35.0%
!! ACGTTTTGAACAACAGACAT+TGG + chr1_3:54268881-54268900 None:intergenic 35.0%
CCAAAACATCAAGATACTTG+TGG + chr1_3:54269061-54269080 None:intergenic 35.0%
! CCACAAGTATCTTGATGTTT+TGG - chr1_3:54269058-54269077 Msa0125710:intron 35.0%
AAGGTTATCGAAAAATTGGC+TGG - chr1_3:54269197-54269216 Msa0125710:intron 35.0%
AAAATTGGCTGGCAATTTCA+TGG - chr1_3:54269208-54269227 Msa0125710:CDS 35.0%
! CTTGTGCTGATAAAACCAAA+AGG - chr1_3:54269323-54269342 Msa0125710:intron 35.0%
AAGTGTGTTTCCTATTCTGA+AGG - chr1_3:54269513-54269532 Msa0125710:intron 35.0%
! GCCATAACTTTTGCATTTAG+AGG + chr1_3:54269757-54269776 None:intergenic 35.0%
!! TTATGGCTTGCATATTTTGG+AGG - chr1_3:54269770-54269789 Msa0125710:intron 35.0%
AGATTGCCTGATGATTTATC+TGG + chr1_3:54269814-54269833 None:intergenic 35.0%
TAAATCATCAGGCAATCTAC+TGG - chr1_3:54269816-54269835 Msa0125710:intron 35.0%
GAATTCCAAACAAATACGGA+AGG + chr1_3:54269851-54269870 None:intergenic 35.0%
ACATAGTTAGCTATGTACCT+AGG - chr1_3:54269909-54269928 Msa0125710:CDS 35.0%
AGTGCATTATGTCATTACCT+AGG + chr1_3:54269929-54269948 None:intergenic 35.0%
GGTAATGACATAATGCACTT+AGG - chr1_3:54269930-54269949 Msa0125710:intron 35.0%
TGCTAAAAGTGAATAAGCAG+AGG - chr1_3:54270017-54270036 Msa0125710:intron 35.0%
! ATGAACCTTTTGCAATATGC+AGG - chr1_3:54270119-54270138 Msa0125710:intron 35.0%
ATCATCCTGCATATTGCAAA+AGG + chr1_3:54270127-54270146 None:intergenic 35.0%
!!! TCCAAGTTTTTTACAGACGA+AGG - chr1_3:54270255-54270274 Msa0125710:intron 35.0%
ACCTTCGTCTGTAAAAAACT+TGG + chr1_3:54270259-54270278 None:intergenic 35.0%
ATATGGAGTACATCAAGCAA+CGG + chr1_3:54270298-54270317 None:intergenic 35.0%
! GTGTTGTCCCATTTAAGATA+TGG + chr1_3:54270315-54270334 None:intergenic 35.0%
! TGAGATCTTGCCATTTACAA+TGG + chr1_3:54270386-54270405 None:intergenic 35.0%
!! GGTTCTGAAGCATTATACAT+TGG - chr1_3:54270513-54270532 Msa0125710:intron 35.0%
ATATATGCAGCAAGCAGATA+AGG + chr1_3:54270730-54270749 None:intergenic 35.0%
! CTGCTTGCTGCATATATATA+TGG - chr1_3:54270733-54270752 Msa0125710:intron 35.0%
GCTGCATATATATATGGTTG+TGG - chr1_3:54270739-54270758 Msa0125710:intron 35.0%
! GGATGTTCTCTTGATTTTTG+AGG - chr1_3:54270810-54270829 Msa0125710:CDS 35.0%
GAAATTCTTTGCAGTCTGTA+AGG - chr1_3:54270870-54270889 Msa0125710:CDS 35.0%
TTAGAAGTTCTTCCAGAAAC+TGG + chr1_3:54271046-54271065 None:intergenic 35.0%
TACCTCCAAATATGCAAAAC+AGG - chr1_3:54271177-54271196 Msa0125710:intron 35.0%
! TACCTGTTTTGCATATTTGG+AGG + chr1_3:54271182-54271201 None:intergenic 35.0%
CTGTGACTATTTCATCTGAA+TGG - chr1_3:54271212-54271231 Msa0125710:intron 35.0%
CTCTACACATTTGAAAGATC+TGG + chr1_3:54271306-54271325 None:intergenic 35.0%
CAGATCTTTCAAATGTGTAG+AGG - chr1_3:54271304-54271323 Msa0125710:CDS 35.0%
GATCTTTCAAATGTGTAGAG+GGG - chr1_3:54271306-54271325 Msa0125710:CDS 35.0%
! GAAAGTACAGATTAGGGTTT+AGG - chr1_3:54271435-54271454 Msa0125710:intron 35.0%
!! AAGTTTTAACATGCAAGTGG+GGG + chr1_3:54271744-54271763 None:intergenic 35.0%
!! TGTTGAAGGGTAATTTTGAC+CGG - chr1_3:54271858-54271877 Msa0125710:intron 35.0%
!!! GAGTTCATTTTGGGTTATAC+TGG - chr1_3:54272026-54272045 Msa0125710:intron 35.0%
ACAGAAGAGAATCAATGTGA+AGG + chr1_3:54272082-54272101 None:intergenic 35.0%
AGACATTACACAGTTCTACA+TGG + chr1_3:54272480-54272499 None:intergenic 35.0%
!!! TTTTTCAAGACAGTGATGCA+AGG + chr1_3:54272679-54272698 None:intergenic 35.0%
AGTAGACATGTACAATCTCT+TGG - chr1_3:54272793-54272812 Msa0125710:intron 35.0%
TAGGTTACAGTAGAGACTAT+TGG + chr1_3:54272870-54272889 None:intergenic 35.0%
GTACATCACCATTAGCATTA+CGG + chr1_3:54273085-54273104 None:intergenic 35.0%
TGTACAAATTGCAACTAGAG+AGG - chr1_3:54273100-54273119 Msa0125710:intron 35.0%
!!! TCTATAGCACATTTTAGGGT+AGG + chr1_3:54273393-54273412 None:intergenic 35.0%
!!! CAATTGGCTTATTTTAGGGT+AGG + chr1_3:54273422-54273441 None:intergenic 35.0%
!! GTCTGCAATTGGCTTATTTT+AGG + chr1_3:54273427-54273446 None:intergenic 35.0%
TTGAAGAACTTGTCTGCAAT+TGG + chr1_3:54273438-54273457 None:intergenic 35.0%
TGAAAATATGCCGGGAAAAT+TGG - chr1_3:54273904-54273923 Msa0125710:intron 35.0%
GAAAATATGCCGGGAAAATT+GGG - chr1_3:54273905-54273924 Msa0125710:intron 35.0%
! TATTGTCAACCCAATTTTCC+CGG + chr1_3:54273917-54273936 None:intergenic 35.0%
ATATTTAGCCATGCTATCCT+TGG - chr1_3:54273984-54274003 Msa0125710:intron 35.0%
AACATAATCCAAGGATAGCA+TGG + chr1_3:54273995-54274014 None:intergenic 35.0%
!! TTGGACAATTCCTGTTTTTC+TGG - chr1_3:54274025-54274044 Msa0125710:intron 35.0%
!! TCATTCTTTGAAATGGAAGC+AGG + chr1_3:54274222-54274241 None:intergenic 35.0%
GACATAACAAACAGGTGATT+TGG - chr1_3:54274512-54274531 Msa0125710:CDS 35.0%
! AATGATGTGTCCAACTTTTC+TGG + chr1_3:54274557-54274576 None:intergenic 35.0%
!! GCGAAGTATTTTCAGAAGAA+TGG - chr1_3:54274645-54274664 Msa0125710:intron 35.0%
! ACAGACTCTATTGATAATCC+TGG - chr1_3:54274745-54274764 Msa0125710:intron 35.0%
AATCATGTCTCATGATAGCA+TGG - chr1_3:54274775-54274794 Msa0125710:intron 35.0%
AGCAGGAAAAAAGAGTTAAG+AGG + chr1_3:54274869-54274888 None:intergenic 35.0%
! ATTAATTTTTCTCTCGTGGC+AGG - chr1_3:54274896-54274915 Msa0125710:intron 35.0%
CAGAGAAAATATATGGTTGC+GGG + chr1_3:54274991-54275010 None:intergenic 35.0%
GCAGAGAAAATATATGGTTG+CGG + chr1_3:54274992-54275011 None:intergenic 35.0%
!! GTCTTACCAGAAAAAGTGTT+TGG - chr1_3:54275029-54275048 Msa0125710:intron 35.0%
AAGCAGGAAAACCAAAAGAT+GGG + chr1_3:54275125-54275144 None:intergenic 35.0%
AAAGCAGGAAAACCAAAAGA+TGG + chr1_3:54275126-54275145 None:intergenic 35.0%
ATCAAGGATTGAAGAAAAGC+AGG + chr1_3:54275141-54275160 None:intergenic 35.0%
! CAATCCTTGATTTTCATGCT+TGG - chr1_3:54275150-54275169 Msa0125710:intron 35.0%
TGATGTGGAGAAATTACTGA+AGG - chr1_3:54275357-54275376 Msa0125710:intron 35.0%
! CGACTATTTTGCAGAACTTT+GGG - chr1_3:54275617-54275636 Msa0125710:intron 35.0%
TGTTCACTTCCTTAGTTTCA+AGG - chr1_3:54275678-54275697 Msa0125710:intron 35.0%
! GTTTCCTTTTATGAACAGAG+AGG - chr1_3:54275827-54275846 Msa0125710:intron 35.0%
!! AATGTTTCTGGAGTTGTTTC+TGG - chr1_3:54275871-54275890 Msa0125710:CDS 35.0%
TTCAAACTAGAATCAGGAGA+AGG - chr1_3:54275938-54275957 Msa0125710:intron 35.0%
TATATTGGGCAAAGTCTTGA+TGG - chr1_3:54276042-54276061 Msa0125710:intron 35.0%
CAAAGTAACGGTAGTAGATT+TGG - chr1_3:54276116-54276135 Msa0125710:CDS 35.0%
!! ATGAAATGTGATGGATTGCA+TGG - chr1_3:54276180-54276199 Msa0125710:intron 35.0%
! GTTTTGCTTACAATAGTGAC+CGG + chr1_3:54276223-54276242 None:intergenic 35.0%
CATTGAATAAGTGATGTACG+TGG + chr1_3:54276297-54276316 None:intergenic 35.0%
! TTTAGCAAGGTACTCATCTT+TGG - chr1_3:54276365-54276384 Msa0125710:intron 35.0%
TGGCATTATGTACTCATCTT+TGG - chr1_3:54276479-54276498 Msa0125710:intron 35.0%
CTAATATTGCAGAGTCAACT+CGG - chr1_3:54276656-54276675 Msa0125710:CDS 35.0%
ATGCTCTTGAAGTATATCGA+AGG + chr1_3:54276821-54276840 None:intergenic 35.0%
ATATCCTAAATCCAATGTCC+TGG + chr1_3:54276994-54277013 None:intergenic 35.0%
TATAGTAGATCCAATGGCAT+AGG + chr1_3:54277091-54277110 None:intergenic 35.0%
TGTTTGATGAATCGTCATCA+AGG + chr1_3:54277394-54277413 None:intergenic 35.0%
ATCAAACAACTCCTTGAAAG+TGG - chr1_3:54277406-54277425 Msa0125710:intron 35.0%
ATCCTTAGAGGACTTTATCA+CGG + chr1_3:54277630-54277649 None:intergenic 35.0%
! GATAAAGTCCTCTAAGGATT+TGG - chr1_3:54277631-54277650 Msa0125710:intron 35.0%
! TTTTCGTTCCAAATCCTTAG+AGG + chr1_3:54277642-54277661 None:intergenic 35.0%
ACAAGAACAGAAACAAGATG+GGG + chr1_3:54277695-54277714 None:intergenic 35.0%
!! TTCTGTTCTTGTTACTTTGG+AGG - chr1_3:54277703-54277722 Msa0125710:intron 35.0%
TCTATTCCTGAGACAAATTC+TGG + chr1_3:54277800-54277819 None:intergenic 35.0%
TTGCGGAAAAAATTCCAGTA+AGG - chr1_3:54277861-54277880 Msa0125710:intron 35.0%
! ATACTTTTAGCAAGCCTTAC+TGG + chr1_3:54277878-54277897 None:intergenic 35.0%
AAGTATGTATTGTTGGATGG+AGG - chr1_3:54277892-54277911 Msa0125710:intron 35.0%
! GGGTATATTTCTAACAATGG+CGG + chr1_3:54277984-54278003 None:intergenic 35.0%
GGCAACATTTATTGGTACAA+TGG - chr1_3:54278055-54278074 Msa0125710:intron 35.0%
AATGGACAGATCATCTATTG+TGG - chr1_3:54278073-54278092 Msa0125710:intron 35.0%
TACCATGCCATAGAAAGATA+TGG + chr1_3:54278315-54278334 None:intergenic 35.0%
TGAAATAAGCGTGCTTTATG+AGG - chr1_3:54278405-54278424 Msa0125710:intron 35.0%
AGTAACTGTGTTCATCATCT+TGG - chr1_3:54278713-54278732 Msa0125710:CDS 35.0%
TTCGAGTCAGAAGAAAAAGA+AGG - chr1_3:54278763-54278782 Msa0125710:intron 35.0%
AACAGATATCTTGTCTGTCA+AGG - chr1_3:54278817-54278836 Msa0125710:intron 35.0%
ACAGATATCTTGTCTGTCAA+GGG - chr1_3:54278818-54278837 Msa0125710:intron 35.0%
ATAGAGGAAACACTTGTGTA+AGG + chr1_3:54278873-54278892 None:intergenic 35.0%
TCTTGACTCATCAAATTTCC+AGG - chr1_3:54278913-54278932 Msa0125710:CDS 35.0%
AGTGGAAAAATATACTAGCC+TGG + chr1_3:54278934-54278953 None:intergenic 35.0%
AATTATACTTCACGGTTCAG+AGG + chr1_3:54279374-54279393 None:intergenic 35.0%
AAGACACGAGCTAGAATATT+GGG - chr1_3:54279531-54279550 Msa0125710:intron 35.0%
TTCAGTTAAATCTCTTGCAC+AGG - chr1_3:54279659-54279678 Msa0125710:CDS 35.0%
AGGAAATAGAGTCTTTGAGT+GGG - chr1_3:54279691-54279710 Msa0125710:CDS 35.0%
CTCAACGAATCTAACATCAT+AGG + chr1_3:54279734-54279753 None:intergenic 35.0%
AATGCCACCTTTCCTTTAAA+TGG + chr1_3:54279812-54279831 None:intergenic 35.0%
! CGTGTTCTTCTTCTTCGTTT+TGG + chr1_3:54262124-54262143 None:intergenic 40.0%
AAACGAAGAAGAAGAACACG+AGG - chr1_3:54262124-54262143 Msa0125710:three_prime_UTR 40.0%
! AAGTTAGGGTTAGGGTTTTG+TGG + chr1_3:54262150-54262169 None:intergenic 40.0%
TCTAGCAATGGCAAATTCCT+TGG - chr1_3:54262195-54262214 Msa0125710:exon 40.0%
AGCTTGTAATTGAGAAGCCA+AGG + chr1_3:54262215-54262234 None:intergenic 40.0%
AAGATAGAAGGACGAGTGAA+CGG + chr1_3:54262280-54262299 None:intergenic 40.0%
GGATTCAGTACTCTTATCAG+CGG + chr1_3:54262320-54262339 None:intergenic 40.0%
!! TTCTGATTAGCACCGATGAA+AGG - chr1_3:54262500-54262519 Msa0125710:intron 40.0%
!! TTAGCACCGATGAAAGGTTT+AGG - chr1_3:54262506-54262525 Msa0125710:intron 40.0%
GATACATGAGCACAATGTTG+AGG - chr1_3:54262797-54262816 Msa0125710:intron 40.0%
! CTTAAAGGTGTGAAAGACTC+GGG - chr1_3:54262998-54263017 Msa0125710:intron 40.0%
TGCTGCACTATAACCATTCT+AGG + chr1_3:54263034-54263053 None:intergenic 40.0%
!!! TTGTTGAAGTTTTGGGTGTG+AGG - chr1_3:54263228-54263247 Msa0125710:CDS 40.0%
!!! TGTTGAAGTTTTGGGTGTGA+GGG - chr1_3:54263229-54263248 Msa0125710:CDS 40.0%
TGAAGACCAGAATTCACGAA+AGG + chr1_3:54263284-54263303 None:intergenic 40.0%
GAAGGATCTTTCAGATCACA+AGG - chr1_3:54263313-54263332 Msa0125710:intron 40.0%
! TGGTTTCTGTGATGACCTTT+TGG - chr1_3:54263380-54263399 Msa0125710:intron 40.0%
AAATGGATCTTGACATGAGG+GGG + chr1_3:54263452-54263471 None:intergenic 40.0%
CATATCCAGCTATGTGGATT+TGG + chr1_3:54263679-54263698 None:intergenic 40.0%
GCATTATATATGCAAGGTCC+GGG - chr1_3:54263877-54263896 Msa0125710:CDS 40.0%
CATTATATATGCAAGGTCCG+GGG - chr1_3:54263878-54263897 Msa0125710:CDS 40.0%
!! GTTGGTTTGTGGTCTTTGTT+TGG + chr1_3:54263999-54264018 None:intergenic 40.0%
TTGCAAACTTCCCATTAGGA+AGG - chr1_3:54264166-54264185 Msa0125710:CDS 40.0%
! AATCAACTGGCTCAAAAGGT+TGG + chr1_3:54264302-54264321 None:intergenic 40.0%
! CCTTTTGAGCCAGTTGATTA+CGG - chr1_3:54264303-54264322 Msa0125710:CDS 40.0%
! CTTTTGAGCCAGTTGATTAC+GGG - chr1_3:54264304-54264323 Msa0125710:CDS 40.0%
! TTTTGAGCCAGTTGATTACG+GGG - chr1_3:54264305-54264324 Msa0125710:CDS 40.0%
GACAATAGTTCAACAGAAGG+TGG + chr1_3:54264513-54264532 None:intergenic 40.0%
TGCCTTAATCAATCTTGTCC+AGG - chr1_3:54264686-54264705 Msa0125710:CDS 40.0%
TTCTGTAACAGCATAGTACC+TGG + chr1_3:54264707-54264726 None:intergenic 40.0%
!!! TGTGTCAACATTTTGGGACT+AGG + chr1_3:54264838-54264857 None:intergenic 40.0%
ATGGCAACAGCGAAATTACA+AGG + chr1_3:54264934-54264953 None:intergenic 40.0%
TTCTTATAGGGATTTGCCTG+GGG - chr1_3:54264993-54265012 Msa0125710:intron 40.0%
! TATGGGGACCTTTTCTATCA+AGG + chr1_3:54265218-54265237 None:intergenic 40.0%
!! CACACAAGTTGATAGGATCT+TGG + chr1_3:54265266-54265285 None:intergenic 40.0%
TTAATGCAATAGTTGCAGCC+TGG - chr1_3:54265504-54265523 Msa0125710:intron 40.0%
TCAAATGTCAATTAGCTGGC+TGG - chr1_3:54265579-54265598 Msa0125710:intron 40.0%
CAAATGTCAATTAGCTGGCT+GGG - chr1_3:54265580-54265599 Msa0125710:intron 40.0%
GAAAATGATGAACTGCTGCA+CGG + chr1_3:54265652-54265671 None:intergenic 40.0%
!! GTTTGGCTTGTATCATCCAA+AGG - chr1_3:54265875-54265894 Msa0125710:intron 40.0%
TTCGGGCATCTTGAAAAACA+AGG - chr1_3:54266061-54266080 Msa0125710:CDS 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_3:54266480-54266499 Msa0125710:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_3:54266481-54266500 Msa0125710:intron 40.0%
! GATTTGGAGGTGTACAAAGT+CGG - chr1_3:54266530-54266549 Msa0125710:intron 40.0%
! ATTTGGAGGTGTACAAAGTC+GGG - chr1_3:54266531-54266550 Msa0125710:intron 40.0%
AAGCCATTCCACATAATCGT+TGG - chr1_3:54266881-54266900 Msa0125710:CDS 40.0%
AGCCATTCCACATAATCGTT+GGG - chr1_3:54266882-54266901 Msa0125710:CDS 40.0%
AACCCAACGATTATGTGGAA+TGG + chr1_3:54266481-54266500 None:intergenic 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_3:54266480-54266499 Msa0125710:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_3:54266481-54266500 Msa0125710:intron 40.0%
!! GAGCTGATTTGAAGTTGACA+TGG - chr1_3:54267092-54267111 Msa0125710:intron 40.0%
!! GCTGATTTGAAGTTGACATG+GGG - chr1_3:54267094-54267113 Msa0125710:intron 40.0%
! GGTCAAAGCTTTAGTTGTGT+TGG - chr1_3:54267132-54267151 Msa0125710:CDS 40.0%
! AAAGCTTTAGTTGTGTTGGG+TGG - chr1_3:54267136-54267155 Msa0125710:CDS 40.0%
!! CAAGCAGCTTTAAATGTCGA+TGG - chr1_3:54267385-54267404 Msa0125710:intron 40.0%
!! AGCTTTAAATGTCGATGGCT+TGG - chr1_3:54267390-54267409 Msa0125710:intron 40.0%
TCCAAAGTGAATATGGTGAC+TGG - chr1_3:54267586-54267605 Msa0125710:CDS 40.0%
ACCAGTCACCATATTCACTT+TGG + chr1_3:54267590-54267609 None:intergenic 40.0%
! ATTGACTTCTGATCAGCTGT+TGG - chr1_3:54267674-54267693 Msa0125710:intron 40.0%
TTGACTTCTGATCAGCTGTT+GGG - chr1_3:54267675-54267694 Msa0125710:intron 40.0%
! TTGGATGATACCTGTTGGTT+TGG - chr1_3:54267730-54267749 Msa0125710:intron 40.0%
CATGACTATACCAAACCAAC+AGG + chr1_3:54267743-54267762 None:intergenic 40.0%
!! CTGTTGGTTTGGTATAGTCA+TGG - chr1_3:54267741-54267760 Msa0125710:intron 40.0%
AGGTAGTGCCTTCATTAGAA+TGG - chr1_3:54268023-54268042 Msa0125710:intron 40.0%
!! ACCGATAATGTTAGTCTTGC+TGG - chr1_3:54268422-54268441 Msa0125710:intron 40.0%
!! TGCTTTCCAAGTACTGATCA+TGG + chr1_3:54268490-54268509 None:intergenic 40.0%
AAGTAAGAACACGCAAAGTC+GGG + chr1_3:54268579-54268598 None:intergenic 40.0%
ACTTCTCTTATTGCAGACAC+AGG - chr1_3:54268651-54268670 Msa0125710:intron 40.0%
AAGATACTTGTGGCCCTATT+CGG + chr1_3:54269051-54269070 None:intergenic 40.0%
!! GAATGCTGGTGATGTTCTTT+TGG - chr1_3:54269555-54269574 Msa0125710:CDS 40.0%
! ATGTTCTTTTGGACGAGGTA+CGG - chr1_3:54269566-54269585 Msa0125710:CDS 40.0%
! CAGCTTTTGTATGCCAAACT+CGG - chr1_3:54269730-54269749 Msa0125710:intron 40.0%
CTAGTGCCAGATAAATCATC+AGG - chr1_3:54269805-54269824 Msa0125710:intron 40.0%
AAAGGTTCATTCGTGCAACT+AGG + chr1_3:54270109-54270128 None:intergenic 40.0%
GCAGGATGATAGCAAGATAA+AGG - chr1_3:54270137-54270156 Msa0125710:intron 40.0%
!! CTAAGAAATGGAGGTGTTCA+TGG + chr1_3:54270206-54270225 None:intergenic 40.0%
! TGAACTGTGCTGCTAAGAAA+TGG + chr1_3:54270218-54270237 None:intergenic 40.0%
TATGGAGTACATCAAGCAAC+GGG + chr1_3:54270297-54270316 None:intergenic 40.0%
TACAAAGAGATCCATAGCAC+TGG + chr1_3:54270602-54270621 None:intergenic 40.0%
CTTTGTACTCTGCAGCAAAA+TGG - chr1_3:54270615-54270634 Msa0125710:intron 40.0%
TCCTTCTCTTCTTGTTCCAT+TGG - chr1_3:54270665-54270684 Msa0125710:intron 40.0%
TTGTTAAGTTACACGCCTTG+CGG - chr1_3:54270912-54270931 Msa0125710:intron 40.0%
GGAAGAACTTCTAATTGCGT+TGG - chr1_3:54271052-54271071 Msa0125710:intron 40.0%
ATATTATGATAGGACGAGCC+CGG + chr1_3:54271152-54271171 None:intergenic 40.0%
TGCTTAGCTGCTTCTGTTAT+TGG - chr1_3:54271274-54271293 Msa0125710:CDS 40.0%
CAAATGTGTAGAGGGGAATT+TGG - chr1_3:54271313-54271332 Msa0125710:CDS 40.0%
TTGACATAGATTGTGTGTCC+TGG - chr1_3:54271374-54271393 Msa0125710:intron 40.0%
TAGGGTTTAGGGATATTCTG+TGG - chr1_3:54271447-54271466 Msa0125710:intron 40.0%
!! TTTTGGTGTGGCTTTTCTTC+CGG + chr1_3:54271880-54271899 None:intergenic 40.0%
!!! GGGGATACATTTTTTTGGTG+TGG + chr1_3:54271892-54271911 None:intergenic 40.0%
ACTGGGAAATTCTCCAACTA+CGG - chr1_3:54272044-54272063 Msa0125710:intron 40.0%
! TAGGATGCTGTGTCTTTTGT+TGG - chr1_3:54272376-54272395 Msa0125710:CDS 40.0%
CTGATGAAACTTCCAATCTG+AGG - chr1_3:54272431-54272450 Msa0125710:CDS 40.0%
! GAAACTTCCAATCTGAGGTT+TGG - chr1_3:54272436-54272455 Msa0125710:CDS 40.0%
CACAGTTCTACATGGAGAAA+AGG + chr1_3:54272472-54272491 None:intergenic 40.0%
TGTGTAATGTCTTCTCCTTC+AGG - chr1_3:54272488-54272507 Msa0125710:intron 40.0%
!! CTCTTTACAGAAAGTGTTGC+AGG - chr1_3:54272529-54272548 Msa0125710:intron 40.0%
TTTCTGTGCCGTAATGCTAA+TGG - chr1_3:54273074-54273093 Msa0125710:intron 40.0%
ACTCACATTTATGCGCATCA+AGG + chr1_3:54273126-54273145 None:intergenic 40.0%
TTCTTCAACCAATGCCCTTA+GGG - chr1_3:54273450-54273469 Msa0125710:CDS 40.0%
CTTAGGACATCTCTCTTTCA+AGG + chr1_3:54273722-54273741 None:intergenic 40.0%
ATGTCCTAAGCACTAGATGA+TGG - chr1_3:54273732-54273751 Msa0125710:intron 40.0%
GCAGTGTAAGACTTAAGAGA+CGG - chr1_3:54273764-54273783 Msa0125710:intron 40.0%
CAAGTATGAGGTCAAGTATG+CGG + chr1_3:54274346-54274365 None:intergenic 40.0%
CACCAAAGTGTGGCAAAATT+AGG - chr1_3:54274366-54274385 Msa0125710:intron 40.0%
! GACCTAATTTTGCCACACTT+TGG + chr1_3:54274371-54274390 None:intergenic 40.0%
TAGTACCATGCCAGAAAAGT+TGG - chr1_3:54274544-54274563 Msa0125710:CDS 40.0%
ACAGTTTCGGAAAGACTTGA+CGG + chr1_3:54274713-54274732 None:intergenic 40.0%
! GACTCTATTGATAATCCTGG+AGG - chr1_3:54274748-54274767 Msa0125710:intron 40.0%
GAGACATGATTATATCCTCC+AGG + chr1_3:54274766-54274785 None:intergenic 40.0%
!!! AGATGCCCAAACACTTTTTC+TGG + chr1_3:54275038-54275057 None:intergenic 40.0%
! ACAGCTGATTCTCCAATAAC+TGG + chr1_3:54275074-54275093 None:intergenic 40.0%
AGCAGGAAAACCAAAAGATG+GGG + chr1_3:54275124-54275143 None:intergenic 40.0%
AACACATAAGTGGAGATGCA+TGG + chr1_3:54275250-54275269 None:intergenic 40.0%
TATCTGCGATTGTTCCTTGT+TGG - chr1_3:54275320-54275339 Msa0125710:intron 40.0%
GTGGAGAAATTACTGAAGGT+TGG - chr1_3:54275361-54275380 Msa0125710:intron 40.0%
AGAGTTACTTCCACTCATGT+AGG + chr1_3:54275423-54275442 None:intergenic 40.0%
CTTCTGTGCTCAACAATTTC+AGG + chr1_3:54275502-54275521 None:intergenic 40.0%
CTGAAATTGTTGAGCACAGA+AGG - chr1_3:54275500-54275519 Msa0125710:intron 40.0%
! GCGACTATTTTGCAGAACTT+TGG - chr1_3:54275616-54275635 Msa0125710:intron 40.0%
! ATTTTGCAGAACTTTGGGTG+AGG - chr1_3:54275622-54275641 Msa0125710:intron 40.0%
! TTTTGCAGAACTTTGGGTGA+GGG - chr1_3:54275623-54275642 Msa0125710:intron 40.0%
CTCAATATTGAGGAAACAGG+TGG + chr1_3:54275708-54275727 None:intergenic 40.0%
CGTCTCAATATTGAGGAAAC+AGG + chr1_3:54275711-54275730 None:intergenic 40.0%
TGTTGACCAGTCAATGTTTC+TGG - chr1_3:54275859-54275878 Msa0125710:CDS 40.0%
ACAACTCCAGAAACATTGAC+TGG + chr1_3:54275868-54275887 None:intergenic 40.0%
GAATGACCACTGCAAAGTAA+CGG - chr1_3:54276104-54276123 Msa0125710:CDS 40.0%
TTGCATCTACAAGATGCAAG+AGG + chr1_3:54276706-54276725 None:intergenic 40.0%
CATTGTGAGGAAAGAGTTGA+AGG - chr1_3:54276751-54276770 Msa0125710:intron 40.0%
ACTAGGACGAGAATAAAGAC+AGG + chr1_3:54276963-54276982 None:intergenic 40.0%
! ATGTCCTGGTGTCTAAAACT+AGG + chr1_3:54276980-54276999 None:intergenic 40.0%
!!! AGTTTTAGACACCAGGACAT+TGG - chr1_3:54276980-54276999 Msa0125710:intron 40.0%
TTAACGCCTAAAGGCAACAA+AGG - chr1_3:54277278-54277297 Msa0125710:CDS 40.0%
CTTGAACCTTTGTTGCCTTT+AGG + chr1_3:54277287-54277306 None:intergenic 40.0%
GATCAAGATCAAGTTCTCGT+TGG - chr1_3:54277306-54277325 Msa0125710:CDS 40.0%
!! AAGTTCTCGTTGGCTTCAAT+TGG - chr1_3:54277316-54277335 Msa0125710:CDS 40.0%
AAGAACTTTGATCAACGCAG+CGG + chr1_3:54277570-54277589 None:intergenic 40.0%
GATCAAAGTTCTTGGTCCAA+AGG - chr1_3:54277577-54277596 Msa0125710:intron 40.0%
TGGATTACGAAAGCTTCTTG+CGG - chr1_3:54277844-54277863 Msa0125710:intron 40.0%
! TATTTCTAACAATGGCGGCA+GGG + chr1_3:54277979-54277998 None:intergenic 40.0%
! ATATTTCTAACAATGGCGGC+AGG + chr1_3:54277980-54277999 None:intergenic 40.0%
AATATACCCAACTGCTGTTG+AGG - chr1_3:54277995-54278014 Msa0125710:intron 40.0%
TCATCTATTGTGGCATTCCA+TGG - chr1_3:54278083-54278102 Msa0125710:intron 40.0%
CATGCTCTCTGTAAGCTTTA+GGG + chr1_3:54278219-54278238 None:intergenic 40.0%
ACATGCTCTCTGTAAGCTTT+AGG + chr1_3:54278220-54278239 None:intergenic 40.0%
GTCGATGAAACTGTATCTTC+AGG - chr1_3:54278275-54278294 Msa0125710:intron 40.0%
AACTGTATCTTCAGGAAGCA+TGG - chr1_3:54278283-54278302 Msa0125710:intron 40.0%
! TATCTTCAGGAAGCATGGAT+AGG - chr1_3:54278288-54278307 Msa0125710:intron 40.0%
! ATCTTCAGGAAGCATGGATA+GGG - chr1_3:54278289-54278308 Msa0125710:intron 40.0%
GATAGGGCCATATCTTTCTA+TGG - chr1_3:54278305-54278324 Msa0125710:intron 40.0%
!! ATAAGCTTGCTGAGAACCAT+CGG - chr1_3:54278336-54278355 Msa0125710:intron 40.0%
ATTAGGCAATGACTTACCGA+TGG + chr1_3:54278355-54278374 None:intergenic 40.0%
AGTAAATTGCATCGCAACTG+CGG + chr1_3:54278561-54278580 None:intergenic 40.0%
!! AAGGCTAAGATTTTGGGTGA+CGG - chr1_3:54278782-54278801 Msa0125710:intron 40.0%
AAGTGTTTCCTCTATGACAC+CGG - chr1_3:54278878-54278897 Msa0125710:CDS 40.0%
TCACGCTAGGTATATTCATG+TGG + chr1_3:54279277-54279296 None:intergenic 40.0%
CATGAATATACCTAGCGTGA+CGG - chr1_3:54279277-54279296 Msa0125710:CDS 40.0%
!! GACCTACTTGTTGTTTGCAT+CGG - chr1_3:54279308-54279327 Msa0125710:CDS 40.0%
! TGTTGTTTGCATCGGTCAAA+TGG - chr1_3:54279316-54279335 Msa0125710:CDS 40.0%
!! TATTCTAGCTCGTGTCTTCT+CGG + chr1_3:54279529-54279548 None:intergenic 40.0%
GAAGACACGAGCTAGAATAT+TGG - chr1_3:54279530-54279549 Msa0125710:intron 40.0%
CAGGAAATAGAGTCTTTGAG+TGG - chr1_3:54279690-54279709 Msa0125710:CDS 40.0%
GGAAATAGAGTCTTTGAGTG+GGG - chr1_3:54279692-54279711 Msa0125710:CDS 40.0%
AACATCATAGGTAGTCTCGA+AGG + chr1_3:54279722-54279741 None:intergenic 40.0%
TGATGTTAGATTCGTTGAGC+TGG - chr1_3:54279735-54279754 Msa0125710:exon 40.0%
TTAGATTCGTTGAGCTGGAA+TGG - chr1_3:54279740-54279759 Msa0125710:five_prime_UTR 40.0%
AGCTGGAATGGTGTAATGAT+AGG - chr1_3:54279752-54279771 Msa0125710:five_prime_UTR 40.0%
ATGGCCATTTAAAGGAAAGG+TGG - chr1_3:54279805-54279824 Msa0125710:five_prime_UTR 40.0%
AGGAAATTTCAGTTGGCGGT+TGG - chr1_3:54262033-54262052 Msa0125710:three_prime_UTR 45.0%
AACAGGAAAGAGAAGCTGCA+AGG + chr1_3:54262084-54262103 None:intergenic 45.0%
TGCGGAATCAGTAAGTGCTA+TGG + chr1_3:54262245-54262264 None:intergenic 45.0%
CTCTTATCAGCGGCTTCTTT+AGG + chr1_3:54262310-54262329 None:intergenic 45.0%
TTGAGCAGCGATGGTGTAAA+TGG + chr1_3:54262341-54262360 None:intergenic 45.0%
ATTTACACCATCGCTGCTCA+AGG - chr1_3:54262340-54262359 Msa0125710:CDS 45.0%
TGGTTGTGTTTCAGGATTGG+AGG - chr1_3:54262477-54262496 Msa0125710:intron 45.0%
CAGTCCCCAGAGTAAAGAAT+TGG - chr1_3:54262549-54262568 Msa0125710:intron 45.0%
AATGCATGTGTGTCGTGGTA+CGG + chr1_3:54262843-54262862 None:intergenic 45.0%
GAACAAATGCATGTGTGTCG+TGG + chr1_3:54262848-54262867 None:intergenic 45.0%
CAGCAATGTCTTCGTGATTG+TGG - chr1_3:54263049-54263068 Msa0125710:intron 45.0%
TGGTCTTCAGCCTGATAAGA+AGG - chr1_3:54263295-54263314 Msa0125710:intron 45.0%
TCTTGACATGAGGGGGTAAA+AGG + chr1_3:54263445-54263464 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr1_3:54263849-54263868 Msa0125710:CDS 45.0%
CTGCTTGCAAACTTCCCATT+AGG - chr1_3:54264162-54264181 Msa0125710:CDS 45.0%
ATAGGGAGGGAGTTGTGAAA+AGG - chr1_3:54264259-54264278 Msa0125710:CDS 45.0%
TAGGGAGGGAGTTGTGAAAA+GGG - chr1_3:54264260-54264279 Msa0125710:CDS 45.0%
! CCGTAATCAACTGGCTCAAA+AGG + chr1_3:54264306-54264325 None:intergenic 45.0%
GGTTTGATACGTTCAGTTGC+CGG - chr1_3:54264606-54264625 Msa0125710:CDS 45.0%
GTTTGATACGTTCAGTTGCC+GGG - chr1_3:54264607-54264626 Msa0125710:CDS 45.0%
TGTTGACACACTTCCAACGA+AGG - chr1_3:54264848-54264867 Msa0125710:intron 45.0%
AAAACATCCAAGGCCTTCGT+TGG + chr1_3:54264864-54264883 None:intergenic 45.0%
TGGACTCCCTAATTATCTGC+AGG - chr1_3:54265070-54265089 Msa0125710:CDS 45.0%
GACTCAACATCTTCGATGTC+AGG - chr1_3:54265307-54265326 Msa0125710:intron 45.0%
AAGAACTGAGCTGTGTACAG+CGG + chr1_3:54265461-54265480 None:intergenic 45.0%
AAGTCAGTGTGTGGTACCTT+TGG + chr1_3:54265894-54265913 None:intergenic 45.0%
!!! AGTACAGTTTTGGGAGGAGA+GGG + chr1_3:54266124-54266143 None:intergenic 45.0%
!!! AAGTACAGTTTTGGGAGGAG+AGG + chr1_3:54266125-54266144 None:intergenic 45.0%
ATCCCCGACTGTTATCCTAT+GGG - chr1_3:54266188-54266207 Msa0125710:CDS 45.0%
TCAGCCCATAGGATAACAGT+CGG + chr1_3:54266195-54266214 None:intergenic 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_3:54266482-54266501 Msa0125710:intron 45.0%
! TTTGGAGGTGTACAAAGTCG+GGG - chr1_3:54266532-54266551 Msa0125710:intron 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_3:54266482-54266501 Msa0125710:intron 45.0%
GTACAAAGTAGGGGTGGTTA+TGG - chr1_3:54266947-54266966 Msa0125710:CDS 45.0%
!! GGGTCTTATTGACATCCTAG+AGG - chr1_3:54267321-54267340 Msa0125710:intron 45.0%
ACTGTCTCAATATGGCCTCT+AGG + chr1_3:54267339-54267358 None:intergenic 45.0%
TTCTCGGAATGTACTCTCGT+TGG - chr1_3:54267711-54267730 Msa0125710:intron 45.0%
TCTCGTTGGATGATACCTGT+TGG - chr1_3:54267725-54267744 Msa0125710:intron 45.0%
AGCTTAACTAGATTGGGCCT+TGG + chr1_3:54268146-54268165 None:intergenic 45.0%
GGCAGGCCCAGTATATATTT+AGG + chr1_3:54268354-54268373 None:intergenic 45.0%
TGTGGCATAGCAAGGAGTAA+TGG + chr1_3:54268530-54268549 None:intergenic 45.0%
! ATTACTCCTTGCTATGCCAC+AGG - chr1_3:54268529-54268548 Msa0125710:intron 45.0%
TTTCAACCTGTGGCATAGCA+AGG + chr1_3:54268538-54268557 None:intergenic 45.0%
ACTGTAGGAATGGCCGAATA+GGG - chr1_3:54269035-54269054 Msa0125710:intron 45.0%
! TTCCTATTCTGAAGGCTGAG+TGG - chr1_3:54269521-54269540 Msa0125710:intron 45.0%
! TCCTATTCTGAAGGCTGAGT+GGG - chr1_3:54269522-54269541 Msa0125710:intron 45.0%
TGGGAATCTTCAGTGAATGC+TGG - chr1_3:54269541-54269560 Msa0125710:CDS 45.0%
!! TGGTGATGTTCTTTTGGACG+AGG - chr1_3:54269561-54269580 Msa0125710:CDS 45.0%
! TGTTCTTTTGGACGAGGTAC+GGG - chr1_3:54269567-54269586 Msa0125710:CDS 45.0%
! TACGGGGATTTGGTCTCATA+TGG - chr1_3:54269584-54269603 Msa0125710:CDS 45.0%
TGCATTTAGAGGTCCGAGTT+TGG + chr1_3:54269746-54269765 None:intergenic 45.0%
! ACTGTGCTGCTAAGAAATGG+AGG + chr1_3:54270215-54270234 None:intergenic 45.0%
ATGGAGTACATCAAGCAACG+GGG + chr1_3:54270296-54270315 None:intergenic 45.0%
CTTTCAACTTGGACTACAGC+AGG + chr1_3:54270576-54270595 None:intergenic 45.0%
! AGCACTGGAGACTTTCAACT+TGG + chr1_3:54270587-54270606 None:intergenic 45.0%
GTTGAAAGTCTCCAGTGCTA+TGG - chr1_3:54270588-54270607 Msa0125710:intron 45.0%
GCCAATGGAACAAGAAGAGA+AGG + chr1_3:54270669-54270688 None:intergenic 45.0%
TCTCTTCTTGTTCCATTGGC+CGG - chr1_3:54270669-54270688 Msa0125710:intron 45.0%
TGTTAAGTTACACGCCTTGC+GGG - chr1_3:54270913-54270932 Msa0125710:intron 45.0%
TACAACAGGGTTCCAGTTTC+TGG - chr1_3:54271031-54271050 Msa0125710:CDS 45.0%
TGTGTAGAGGGGAATTTGGA+TGG - chr1_3:54271317-54271336 Msa0125710:CDS 45.0%
GTGTAGAGGGGAATTTGGAT+GGG - chr1_3:54271318-54271337 Msa0125710:CDS 45.0%
CTGGGAAATTCTCCAACTAC+GGG - chr1_3:54272045-54272064 Msa0125710:intron 45.0%
GAAATTCTCCAACTACGGGA+AGG - chr1_3:54272049-54272068 Msa0125710:intron 45.0%
AGTGATTCTCTCCTTGCTCA+AGG - chr1_3:54272253-54272272 Msa0125710:intron 45.0%
GTGATTCTCTCCTTGCTCAA+GGG - chr1_3:54272254-54272273 Msa0125710:intron 45.0%
TCTCCTTGCTCAAGGGAATT+GGG - chr1_3:54272261-54272280 Msa0125710:intron 45.0%
! GATGCTGTGTCTTTTGTTGG+AGG - chr1_3:54272379-54272398 Msa0125710:CDS 45.0%
TAGCTCACCAAACCTCAGAT+TGG + chr1_3:54272446-54272465 None:intergenic 45.0%
GTAATGTCTTCTCCTTCAGG+TGG - chr1_3:54272491-54272510 Msa0125710:intron 45.0%
TGAAGATCATCTCCACCTGA+AGG + chr1_3:54272506-54272525 None:intergenic 45.0%
ACTGGAAAAGGCAATGACCA+AGG + chr1_3:54272618-54272637 None:intergenic 45.0%
! TGGTCATTGCCTTTTCCAGT+TGG - chr1_3:54272618-54272637 Msa0125710:CDS 45.0%
! CATTGCCTTTTCCAGTTGGA+TGG - chr1_3:54272622-54272641 Msa0125710:CDS 45.0%
TCATGCCATCCAACTGGAAA+AGG + chr1_3:54272630-54272649 None:intergenic 45.0%
TGCAAGGCTCTACATAAGCA+GGG + chr1_3:54272663-54272682 None:intergenic 45.0%
ATGCAAGGCTCTACATAAGC+AGG + chr1_3:54272664-54272683 None:intergenic 45.0%
GAGGTCACAGTAGAGACTAT+TGG + chr1_3:54273006-54273025 None:intergenic 45.0%
!! ATACAAAACAGGCACCGAAG+AGG + chr1_3:54273214-54273233 None:intergenic 45.0%
GTTCTTCAACCAATGCCCTT+AGG - chr1_3:54273449-54273468 Msa0125710:CDS 45.0%
! TACGTCGATTGTCACCCTAA+GGG + chr1_3:54273467-54273486 None:intergenic 45.0%
!! CTCTAGAGCTTGCTCATGAA+GGG - chr1_3:54273563-54273582 Msa0125710:intron 45.0%
TCTCTCTTTCAAGGAGGCAA+CGG + chr1_3:54273713-54273732 None:intergenic 45.0%
AGGACATCTCTCTTTCAAGG+AGG + chr1_3:54273719-54273738 None:intergenic 45.0%
! TCCTAAGCACTAGATGATGG+AGG - chr1_3:54273735-54273754 Msa0125710:intron 45.0%
!! CACTAGATGATGGAGGCATA+TGG - chr1_3:54273742-54273761 Msa0125710:intron 45.0%
TTCGTAGAGGAAGTCTGAGA+TGG - chr1_3:54273838-54273857 Msa0125710:intron 45.0%
! CACACTTTGGTGCAAGTATG+AGG + chr1_3:54274358-54274377 None:intergenic 45.0%
CTCATACTTGCACCAAAGTG+TGG - chr1_3:54274356-54274375 Msa0125710:intron 45.0%
!! TGTGTCCAACTTTTCTGGCA+TGG + chr1_3:54274552-54274571 None:intergenic 45.0%
! AATTGCCGCTTGATTCTTGC+AGG - chr1_3:54274588-54274607 Msa0125710:CDS 45.0%
GAATGCCTGCAAGAATCAAG+CGG + chr1_3:54274596-54274615 None:intergenic 45.0%
AAATGACGCACTTTCCCTTG+AGG - chr1_3:54274670-54274689 Msa0125710:intron 45.0%
TTGGGATGATCCTTCCTCAA+GGG + chr1_3:54274687-54274706 None:intergenic 45.0%
AGCTACTGATAGAGTTTGCC+CGG - chr1_3:54274946-54274965 Msa0125710:intron 45.0%
TGACAACAACATCGGTAGTC+CGG + chr1_3:54274968-54274987 None:intergenic 45.0%
GGACCCAAGCATGAAAATCA+AGG + chr1_3:54275157-54275176 None:intergenic 45.0%
TCTGTCTTAGACAGCCAACA+AGG + chr1_3:54275337-54275356 None:intergenic 45.0%
! GCTGTCTAAGACAGATGATG+TGG - chr1_3:54275342-54275361 Msa0125710:intron 45.0%
GGGTGAGGGTAAAAAATGCT+TGG - chr1_3:54275637-54275656 Msa0125710:intron 45.0%
GGTGGCTTTCCTTGAAACTA+AGG + chr1_3:54275690-54275709 None:intergenic 45.0%
CATCTGGCGTCTCAATATTG+AGG + chr1_3:54275718-54275737 None:intergenic 45.0%
AGAAGGCTCTCTTGTCATTC+AGG - chr1_3:54275955-54275974 Msa0125710:intron 45.0%
! CTACTACCGTTACTTTGCAG+TGG + chr1_3:54276113-54276132 None:intergenic 45.0%
GGTGAAATTGTTACACCCTC+CGG - chr1_3:54276201-54276220 Msa0125710:intron 45.0%
TGCTTACAATAGTGACCGGA+GGG + chr1_3:54276219-54276238 None:intergenic 45.0%
TTGCTTACAATAGTGACCGG+AGG + chr1_3:54276220-54276239 None:intergenic 45.0%
TGGCTTACAATAGTGACCAG+AGG - chr1_3:54276335-54276354 Msa0125710:intron 45.0%
CTTGCTAAAAGCTACACCTC+TGG + chr1_3:54276354-54276373 None:intergenic 45.0%
!! CAGAGGTGTAGCTTTTAGCA+AGG - chr1_3:54276352-54276371 Msa0125710:intron 45.0%
!!! TCGTCCTAGTTTTAGACACC+AGG - chr1_3:54276973-54276992 Msa0125710:intron 45.0%
GACACCAGGACATTGGATTT+AGG - chr1_3:54276987-54277006 Msa0125710:intron 45.0%
ACAGTCAGCTTAACGCCTAA+AGG - chr1_3:54277269-54277288 Msa0125710:CDS 45.0%
!! TGAAACTGCTGCCACTTTCA+AGG + chr1_3:54277420-54277439 None:intergenic 45.0%
ACGAAGGTGGAACTATTCGA+AGG + chr1_3:54277470-54277489 None:intergenic 45.0%
AGATTCAAGGCATGCAACGA+AGG + chr1_3:54277486-54277505 None:intergenic 45.0%
TCGAAGGCAACTAGAAGTCA+CGG + chr1_3:54277543-54277562 None:intergenic 45.0%
! GCTGCGTTGATCAAAGTTCT+TGG - chr1_3:54277569-54277588 Msa0125710:intron 45.0%
TCAAGTTTCGACAGTGCCTT+TGG + chr1_3:54277596-54277615 None:intergenic 45.0%
GACCGTGATAAAGTCCTCTA+AGG - chr1_3:54277625-54277644 Msa0125710:intron 45.0%
AACAAGATGGGGTGCATTTG+AGG + chr1_3:54277684-54277703 None:intergenic 45.0%
GAGGCAGTTGTTGTCAAACT+TGG - chr1_3:54277722-54277741 Msa0125710:intron 45.0%
GCAGTTGTTGTCAAACTTGG+TGG - chr1_3:54277725-54277744 Msa0125710:intron 45.0%
CTTCGTCCAGAATTTGTCTC+AGG - chr1_3:54277791-54277810 Msa0125710:intron 45.0%
CTCAGGAATAGATGCCAAAG+TGG - chr1_3:54277808-54277827 Msa0125710:intron 45.0%
CTTTCGTAATCCATGAGCAC+GGG + chr1_3:54277837-54277856 None:intergenic 45.0%
GCTTTCGTAATCCATGAGCA+CGG + chr1_3:54277838-54277857 None:intergenic 45.0%
CTATTGTGGCATTCCATGGA+AGG - chr1_3:54278087-54278106 Msa0125710:intron 45.0%
GGCCATATCTTTCTATGGCA+TGG - chr1_3:54278310-54278329 Msa0125710:intron 45.0%
TGTGTTCATCATCTTGGCGA+TGG - chr1_3:54278719-54278738 Msa0125710:CDS 45.0%
ATATCTTGTCTGTCAAGGGC+TGG - chr1_3:54278822-54278841 Msa0125710:intron 45.0%
AGTGTTTCCTCTATGACACC+GGG - chr1_3:54278879-54278898 Msa0125710:CDS 45.0%
GTCAAGAAACTTTGAGCTCC+CGG + chr1_3:54278900-54278919 None:intergenic 45.0%
GACAAGCAAAATCACTGCTG+AGG + chr1_3:54279157-54279176 None:intergenic 45.0%
ATTCATGTGGTCATCCAACG+AGG + chr1_3:54279264-54279283 None:intergenic 45.0%
TCATCAAATTCCGTCACGCT+AGG + chr1_3:54279290-54279309 None:intergenic 45.0%
GACCGATGCAAACAACAAGT+AGG + chr1_3:54279313-54279332 None:intergenic 45.0%
! TGTTTGCATCGGTCAAATGG+CGG - chr1_3:54279319-54279338 Msa0125710:CDS 45.0%
TCAAGCAGTTCAACGAGGAT+GGG + chr1_3:54279627-54279646 None:intergenic 45.0%
TCTTGCACAGGAAATTCTGC+AGG - chr1_3:54279671-54279690 Msa0125710:CDS 45.0%
!! AACTTATTATATAATATATT+TGG - chr1_3:54263345-54263364 Msa0125710:intron 5.0%
!! ACTTATTATATAATATATTT+GGG - chr1_3:54263346-54263365 Msa0125710:intron 5.0%
!! TTGATATAAAATAATAAAAT+TGG + chr1_3:54267866-54267885 None:intergenic 5.0%
!! TAAATAAATTATCATATATT+TGG + chr1_3:54276910-54276929 None:intergenic 5.0%
!! AAAATGAATATTTATTTATA+AGG + chr1_3:54279124-54279143 None:intergenic 5.0%
CTGCAAGGCAGTAGGGTTTA+GGG + chr1_3:54262069-54262088 None:intergenic 50.0%
AGAGAAGCTGCAAGGCAGTA+GGG + chr1_3:54262076-54262095 None:intergenic 50.0%
AAGAGAAGCTGCAAGGCAGT+AGG + chr1_3:54262077-54262096 None:intergenic 50.0%
TACAGAGCGCGGTTGAAAAC+AGG + chr1_3:54262101-54262120 None:intergenic 50.0%
!! CTTCGTTTTGGTACAGAGCG+CGG + chr1_3:54262112-54262131 None:intergenic 50.0%
GAAGTTACCTTGAGCAGCGA+TGG + chr1_3:54262350-54262369 None:intergenic 50.0%
GGGTGCAACACTACCTAGAA+TGG - chr1_3:54263018-54263037 Msa0125710:intron 50.0%
CTCAGGCATATCCAGCTATG+TGG + chr1_3:54263685-54263704 None:intergenic 50.0%
CATAGCTGGATATGCCTGAG+TGG - chr1_3:54263685-54263704 Msa0125710:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr1_3:54263848-54263867 Msa0125710:CDS 50.0%
AGGGAGGGAGTTGTGAAAAG+GGG - chr1_3:54264261-54264280 Msa0125710:CDS 50.0%
TAAGGATGAAGACTGCCAGC+AGG - chr1_3:54265183-54265202 Msa0125710:CDS 50.0%
GCTGTACACAGCTCAGTTCT+TGG - chr1_3:54265460-54265479 Msa0125710:intron 50.0%
CATAGGATAACAGTCGGGGA+TGG + chr1_3:54266189-54266208 None:intergenic 50.0%
CATCCCCGACTGTTATCCTA+TGG - chr1_3:54266187-54266206 Msa0125710:CDS 50.0%
AGCCCATAGGATAACAGTCG+GGG + chr1_3:54266193-54266212 None:intergenic 50.0%
CAGCCCATAGGATAACAGTC+GGG + chr1_3:54266194-54266213 None:intergenic 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_3:54266483-54266502 Msa0125710:intron 50.0%
! TTGGAGGTGTACAAAGTCGG+GGG - chr1_3:54266533-54266552 Msa0125710:intron 50.0%
GTGTACAAAGTCGGGGGTTA+TGG - chr1_3:54266539-54266558 Msa0125710:intron 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_3:54266483-54266502 Msa0125710:intron 50.0%
TGTGGTGTACAAAGTAGGGG+TGG - chr1_3:54266941-54266960 Msa0125710:CDS 50.0%
AAGCTGCTGTCTGGTAAGTG+TGG - chr1_3:54267478-54267497 Msa0125710:CDS 50.0%
TCACCAATTGTATGCAGGGC+AGG + chr1_3:54268371-54268390 None:intergenic 50.0%
GACTGTAGGAATGGCCGAAT+AGG - chr1_3:54269034-54269053 Msa0125710:intron 50.0%
CAATCGCAGACATCGATACC+TGG - chr1_3:54269152-54269171 Msa0125710:intron 50.0%
TCCCACTCAGCCTTCAGAAT+AGG + chr1_3:54269526-54269545 None:intergenic 50.0%
! GTTCTTTTGGACGAGGTACG+GGG - chr1_3:54269568-54269587 Msa0125710:CDS 50.0%
AACAAACAGTGCACAGAGGG+AGG + chr1_3:54270085-54270104 None:intergenic 50.0%
GGCAACAAACAGTGCACAGA+GGG + chr1_3:54270088-54270107 None:intergenic 50.0%
AGGCAACAAACAGTGCACAG+AGG + chr1_3:54270089-54270108 None:intergenic 50.0%
TACAGCAGGAACACCTACAC+AGG + chr1_3:54270562-54270581 None:intergenic 50.0%
GACTCGTACCTGATCATCAC+CGG + chr1_3:54270691-54270710 None:intergenic 50.0%
GTCTGTAAGGGTTGCTTCCA+TGG - chr1_3:54270883-54270902 Msa0125710:intron 50.0%
GTTAAGTTACACGCCTTGCG+GGG - chr1_3:54270914-54270933 Msa0125710:intron 50.0%
CTCTCCTTGCTCAAGGGAAT+TGG - chr1_3:54272260-54272279 Msa0125710:intron 50.0%
ATGCCCAATTCCCTTGAGCA+AGG + chr1_3:54272267-54272286 None:intergenic 50.0%
CTGAAGTCATGCCATCCAAC+TGG + chr1_3:54272636-54272655 None:intergenic 50.0%
TCAATTCTACACGGGGTTGC+AGG - chr1_3:54272708-54272727 Msa0125710:CDS 50.0%
GGGGTTGCAGGATAAAGCAA+AGG - chr1_3:54272720-54272739 Msa0125710:CDS 50.0%
! GATTGTCACCCTAAGGGCAT+TGG + chr1_3:54273461-54273480 None:intergenic 50.0%
! CTACGTCGATTGTCACCCTA+AGG + chr1_3:54273468-54273487 None:intergenic 50.0%
! CCTTCATGAGCAAGCTCTAG+AGG + chr1_3:54273565-54273584 None:intergenic 50.0%
!! CCTCTAGAGCTTGCTCATGA+AGG - chr1_3:54273562-54273581 Msa0125710:intron 50.0%
TGTTCTCATGGCACTGCTTG+GGG + chr1_3:54273589-54273608 None:intergenic 50.0%
GTGTTCTCATGGCACTGCTT+GGG + chr1_3:54273590-54273609 None:intergenic 50.0%
! TGGGGGTAGGGTACTAGAAA+AGG + chr1_3:54273675-54273694 None:intergenic 50.0%
!! TTTTCTAGTACCCTACCCCC+AGG - chr1_3:54273674-54273693 Msa0125710:intron 50.0%
! TTTCTAGTACCCTACCCCCA+GGG - chr1_3:54273675-54273694 Msa0125710:intron 50.0%
TCTCTTTCAAGGAGGCAACG+GGG + chr1_3:54273711-54273730 None:intergenic 50.0%
CTCTCTTTCAAGGAGGCAAC+GGG + chr1_3:54273712-54273731 None:intergenic 50.0%
GCCTCCATCATCTAGTGCTT+AGG + chr1_3:54273739-54273758 None:intergenic 50.0%
! AGAGGAAGTCTGAGATGGCT+TGG - chr1_3:54273843-54273862 Msa0125710:intron 50.0%
GTTGGGATGATCCTTCCTCA+AGG + chr1_3:54274688-54274707 None:intergenic 50.0%
GTTTCGGAAAGACTTGACGG+CGG + chr1_3:54274710-54274729 None:intergenic 50.0%
GACAACAACATCGGTAGTCC+GGG + chr1_3:54274967-54274986 None:intergenic 50.0%
GTTGCGGGTGACAACAACAT+CGG + chr1_3:54274976-54274995 None:intergenic 50.0%
TGGAGAATCAGCTGTCACAC+AGG - chr1_3:54275079-54275098 Msa0125710:intron 50.0%
TCACGTCTCTCCTACATGAG+TGG - chr1_3:54275410-54275429 Msa0125710:intron 50.0%
GAGTCAACTCGGAGAGCTTA+TGG - chr1_3:54276667-54276686 Msa0125710:CDS 50.0%
AAACTATGCGCGCTGTTGTG+AGG - chr1_3:54276774-54276793 Msa0125710:intron 50.0%
ACATAACAGCCCAAGAGCCT+GGG + chr1_3:54277228-54277247 None:intergenic 50.0%
TTCAAGGCATGCAACGAAGG+TGG + chr1_3:54277483-54277502 None:intergenic 50.0%
ATGAGCACGGGATTCCACTT+TGG + chr1_3:54277825-54277844 None:intergenic 50.0%
AAAGTGGAATCCCGTGCTCA+TGG - chr1_3:54277824-54277843 Msa0125710:intron 50.0%
GTTCATCATCTTGGCGATGG+CGG - chr1_3:54278722-54278741 Msa0125710:CDS 50.0%
GGTTCAGAGGTTGCCACAAA+AGG + chr1_3:54279361-54279380 None:intergenic 50.0%
CTCAAGCAGTTCAACGAGGA+TGG + chr1_3:54279628-54279647 None:intergenic 50.0%
CATCCTCGTTGAACTGCTTG+AGG - chr1_3:54279626-54279645 Msa0125710:CDS 50.0%
CATCCTCAAGCAGTTCAACG+AGG + chr1_3:54279632-54279651 None:intergenic 50.0%
CGTTGAACTGCTTGAGGATG+TGG - chr1_3:54279632-54279651 Msa0125710:CDS 50.0%
GCTGCAAGGCAGTAGGGTTT+AGG + chr1_3:54262070-54262089 None:intergenic 55.0%
!!! GAACGGTCGCTTTTGAGGTG+CGG + chr1_3:54262263-54262282 None:intergenic 55.0%
!!! CGAGTGAACGGTCGCTTTTG+AGG + chr1_3:54262268-54262287 None:intergenic 55.0%
! TCGAGCGTTTGAAGTGCAGC+CGG + chr1_3:54262664-54262683 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_3:54263847-54263866 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_3:54263844-54263863 Msa0125710:CDS 55.0%
GAGCCAGTTGATTACGGGGA+CGG - chr1_3:54264309-54264328 Msa0125710:CDS 55.0%
CTCACAAGCACGAGCAATCC+CGG + chr1_3:54264628-54264647 None:intergenic 55.0%
GATTGCTCGTGCTTGTGAGG+AGG - chr1_3:54264629-54264648 Msa0125710:CDS 55.0%
CACACTTCCAACGAAGGCCT+TGG - chr1_3:54264854-54264873 Msa0125710:intron 55.0%
TCAAGGACAGCAAAGCCTGC+TGG + chr1_3:54265201-54265220 None:intergenic 55.0%
ACTGCTGCACGGAGTTCAGA+AGG + chr1_3:54265641-54265660 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_3:54266486-54266505 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_3:54266486-54266505 None:intergenic 55.0%
! TGTGTTGGCAAGCTGCTGTC+TGG - chr1_3:54267469-54267488 Msa0125710:CDS 55.0%
TTGGACGAGGTACGGGGATT+TGG - chr1_3:54269574-54269593 Msa0125710:CDS 55.0%
TCCATTGGCCGGTGATGATC+AGG - chr1_3:54270680-54270699 Msa0125710:intron 55.0%
ACCTGATCATCACCGGCCAA+TGG + chr1_3:54270684-54270703 None:intergenic 55.0%
ATGTTCAATGCGACCCCGCA+AGG + chr1_3:54270930-54270949 None:intergenic 55.0%
TTGCGGGGTCGCATTGAACA+TGG - chr1_3:54270929-54270948 Msa0125710:intron 55.0%
AGCGTTGTTCACGTCCTCAC+TGG - chr1_3:54271118-54271137 Msa0125710:intron 55.0%
GCGTTGTTCACGTCCTCACT+GGG - chr1_3:54271119-54271138 Msa0125710:intron 55.0%
CGTTGTTCACGTCCTCACTG+GGG - chr1_3:54271120-54271139 Msa0125710:intron 55.0%
GCGTCAAACCTTCCCGTAGT+TGG + chr1_3:54272060-54272079 None:intergenic 55.0%
GGTGTTCTCATGGCACTGCT+TGG + chr1_3:54273591-54273610 None:intergenic 55.0%
AGTGCCATGAGAACACCGCT+CGG - chr1_3:54273594-54273613 Msa0125710:intron 55.0%
!! TTTCTGGGTTGATGCCCGAG+CGG + chr1_3:54273612-54273631 None:intergenic 55.0%
TTCTAGTACCCTACCCCCAG+GGG - chr1_3:54273676-54273695 Msa0125710:intron 55.0%
GACGCACTTTCCCTTGAGGA+AGG - chr1_3:54274674-54274693 Msa0125710:intron 55.0%
GGAAAGACTTGACGGCGGTT+GGG + chr1_3:54274705-54274724 None:intergenic 55.0%
! GCTCTCGCTTCCCCATCTTT+TGG - chr1_3:54275111-54275130 Msa0125710:intron 55.0%
TACCTCATCACGTGTACCCC+AGG - chr1_3:54277208-54277227 Msa0125710:intron 55.0%
CATAACAGCCCAAGAGCCTG+GGG + chr1_3:54277227-54277246 None:intergenic 55.0%
CACATAACAGCCCAAGAGCC+TGG + chr1_3:54277229-54277248 None:intergenic 55.0%
AGTGGCAGCAGTTTCAGCGT+TGG - chr1_3:54277424-54277443 Msa0125710:intron 55.0%
TCAACGCAGCGGAAGTTCGA+AGG + chr1_3:54277559-54277578 None:intergenic 55.0%
! ATGGGGTGCATTTGAGGCTG+GGG + chr1_3:54277678-54277697 None:intergenic 55.0%
! GATGGGGTGCATTTGAGGCT+GGG + chr1_3:54277679-54277698 None:intergenic 55.0%
! AGATGGGGTGCATTTGAGGC+TGG + chr1_3:54277680-54277699 None:intergenic 55.0%
TACCCAACTGCTGTTGAGGC+TGG - chr1_3:54277999-54278018 Msa0125710:intron 55.0%
ACCCAACTGCTGTTGAGGCT+GGG - chr1_3:54278000-54278019 Msa0125710:intron 55.0%
!! TTGAGCTCCCGGTGTCATAG+AGG + chr1_3:54278889-54278908 None:intergenic 55.0%
ATGTGGTCATCCAACGAGGC+AGG + chr1_3:54279260-54279279 None:intergenic 55.0%
!! CAGCTGGCTCAGACCTTTTG+TGG - chr1_3:54279345-54279364 Msa0125710:CDS 55.0%
GGTCCGTCCCCGTAATCAAC+TGG + chr1_3:54264315-54264334 None:intergenic 60.0%
GTTGATTACGGGGACGGACC+TGG - chr1_3:54264315-54264334 Msa0125710:CDS 60.0%
CGGGATTGCTCGTGCTTGTG+AGG - chr1_3:54264626-54264645 Msa0125710:CDS 60.0%
GGGCCTGCCCTGCATACAAT+TGG - chr1_3:54268365-54268384 Msa0125710:intron 60.0%
ATGATAGGACGAGCCCGGTG+TGG + chr1_3:54271147-54271166 None:intergenic 60.0%
GTGCCATGAGAACACCGCTC+GGG - chr1_3:54273595-54273614 Msa0125710:intron 60.0%
ATGCCCGAGCGGTGTTCTCA+TGG + chr1_3:54273601-54273620 None:intergenic 60.0%
TTCGACTTCCCCTGGGGGTA+GGG + chr1_3:54273687-54273706 None:intergenic 60.0%
ATTCGACTTCCCCTGGGGGT+AGG + chr1_3:54273688-54273707 None:intergenic 60.0%
ACGGGGATTCGACTTCCCCT+GGG + chr1_3:54273694-54273713 None:intergenic 60.0%
AACGGGGATTCGACTTCCCC+TGG + chr1_3:54273695-54273714 None:intergenic 60.0%
TGGCAGGCGCAGTTGACAGA+AGG + chr1_3:54274087-54274106 None:intergenic 60.0%
CGGAAAGACTTGACGGCGGT+TGG + chr1_3:54274706-54274725 None:intergenic 60.0%
AGCCTGGGGTACACGTGATG+AGG + chr1_3:54277213-54277232 None:intergenic 60.0%
TCACGTGTACCCCAGGCTCT+TGG - chr1_3:54277215-54277234 Msa0125710:intron 60.0%
CACGTGTACCCCAGGCTCTT+GGG - chr1_3:54277216-54277235 Msa0125710:intron 60.0%
CCCCAGCCTCAACAGCAGTT+GGG + chr1_3:54278004-54278023 None:intergenic 60.0%
CCCAACTGCTGTTGAGGCTG+GGG - chr1_3:54278001-54278020 Msa0125710:intron 60.0%
TCCCCAGCCTCAACAGCAGT+TGG + chr1_3:54278005-54278024 None:intergenic 60.0%
! CTGTCAAGGGCTGGCATCTC+AGG - chr1_3:54278831-54278850 Msa0125710:intron 60.0%
TCTAGACCCACCTGCCTCGT+TGG - chr1_3:54279247-54279266 Msa0125710:CDS 60.0%
GGTCATCCAACGAGGCAGGT+GGG + chr1_3:54279256-54279275 None:intergenic 60.0%
TGGTCATCCAACGAGGCAGG+TGG + chr1_3:54279257-54279276 None:intergenic 60.0%
GGTCAAATGGCGGTCACAGC+TGG - chr1_3:54279329-54279348 Msa0125710:CDS 60.0%
AAGGTCCGGGGTTCGATCCC+CGG - chr1_3:54263890-54263909 Msa0125710:CDS 65.0%
GTCCTCACTGGGGTCCACAC+CGG - chr1_3:54271130-54271149 Msa0125710:intron 65.0%
TCCTCACTGGGGTCCACACC+GGG - chr1_3:54271131-54271150 Msa0125710:intron 65.0%
GGGGATTCGACTTCCCCTGG+GGG + chr1_3:54273692-54273711 None:intergenic 65.0%
CGGGGATTCGACTTCCCCTG+GGG + chr1_3:54273693-54273712 None:intergenic 65.0%
TGTGGCCGGGGATCGAACCC+CGG + chr1_3:54263898-54263917 None:intergenic 70.0%
GCCCGGTGTGGACCCCAGTG+AGG + chr1_3:54271135-54271154 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 54262028 54279912 54262028 ID=Msa0125710;Name=Msa0125710
chr1_3 mRNA 54262028 54279912 54262028 ID=Msa0125710-mRNA-1;Parent=Msa0125710;Name=Msa0125710-mRNA-1;_AED=0.10;_eAED=0.10;_QI=174|0.92|0.92|1|1|1|39|175|2057
chr1_3 exon 54262028 54262436 54262028 ID=Msa0125710-mRNA-1:exon:16735;Parent=Msa0125710-mRNA-1
chr1_3 exon 54262555 54262725 54262555 ID=Msa0125710-mRNA-1:exon:16734;Parent=Msa0125710-mRNA-1
chr1_3 exon 54263081 54263261 54263081 ID=Msa0125710-mRNA-1:exon:16733;Parent=Msa0125710-mRNA-1
chr1_3 exon 54263583 54263974 54263583 ID=Msa0125710-mRNA-1:exon:16732;Parent=Msa0125710-mRNA-1
chr1_3 exon 54264063 54264710 54264063 ID=Msa0125710-mRNA-1:exon:16731;Parent=Msa0125710-mRNA-1
chr1_3 exon 54265057 54265272 54265057 ID=Msa0125710-mRNA-1:exon:16730;Parent=Msa0125710-mRNA-1
chr1_3 exon 54265964 54266309 54265964 ID=Msa0125710-mRNA-1:exon:16729;Parent=Msa0125710-mRNA-1
chr1_3 exon 54266392 54266459 54266392 ID=Msa0125710-mRNA-1:exon:16728;Parent=Msa0125710-mRNA-1
chr1_3 exon 54266562 54266657 54266562 ID=Msa0125710-mRNA-1:exon:16727;Parent=Msa0125710-mRNA-1
chr1_3 exon 54266840 54267022 54266840 ID=Msa0125710-mRNA-1:exon:16726;Parent=Msa0125710-mRNA-1
chr1_3 exon 54267132 54267330 54267132 ID=Msa0125710-mRNA-1:exon:16725;Parent=Msa0125710-mRNA-1
chr1_3 exon 54267415 54267617 54267415 ID=Msa0125710-mRNA-1:exon:16724;Parent=Msa0125710-mRNA-1
chr1_3 exon 54268801 54268890 54268801 ID=Msa0125710-mRNA-1:exon:16723;Parent=Msa0125710-mRNA-1
chr1_3 exon 54269199 54269303 54269199 ID=Msa0125710-mRNA-1:exon:16722;Parent=Msa0125710-mRNA-1
chr1_3 exon 54269390 54269455 54269390 ID=Msa0125710-mRNA-1:exon:16721;Parent=Msa0125710-mRNA-1
chr1_3 exon 54269540 54269689 54269540 ID=Msa0125710-mRNA-1:exon:16720;Parent=Msa0125710-mRNA-1
chr1_3 exon 54269870 54269939 54269870 ID=Msa0125710-mRNA-1:exon:16719;Parent=Msa0125710-mRNA-1
chr1_3 exon 54270742 54270901 54270742 ID=Msa0125710-mRNA-1:exon:16718;Parent=Msa0125710-mRNA-1
chr1_3 exon 54270990 54271056 54270990 ID=Msa0125710-mRNA-1:exon:16717;Parent=Msa0125710-mRNA-1
chr1_3 exon 54271239 54271372 54271239 ID=Msa0125710-mRNA-1:exon:16716;Parent=Msa0125710-mRNA-1
chr1_3 exon 54271664 54271799 54271664 ID=Msa0125710-mRNA-1:exon:16715;Parent=Msa0125710-mRNA-1
chr1_3 exon 54272103 54272222 54272103 ID=Msa0125710-mRNA-1:exon:16714;Parent=Msa0125710-mRNA-1
chr1_3 exon 54272358 54272455 54272358 ID=Msa0125710-mRNA-1:exon:16713;Parent=Msa0125710-mRNA-1
chr1_3 exon 54272596 54272779 54272596 ID=Msa0125710-mRNA-1:exon:16712;Parent=Msa0125710-mRNA-1
chr1_3 exon 54273193 54273273 54273193 ID=Msa0125710-mRNA-1:exon:16711;Parent=Msa0125710-mRNA-1
chr1_3 exon 54273390 54273490 54273390 ID=Msa0125710-mRNA-1:exon:16710;Parent=Msa0125710-mRNA-1
chr1_3 exon 54274450 54274618 54274450 ID=Msa0125710-mRNA-1:exon:16709;Parent=Msa0125710-mRNA-1
chr1_3 exon 54275843 54275917 54275843 ID=Msa0125710-mRNA-1:exon:16708;Parent=Msa0125710-mRNA-1
chr1_3 exon 54276044 54276175 54276044 ID=Msa0125710-mRNA-1:exon:16707;Parent=Msa0125710-mRNA-1
chr1_3 exon 54276264 54276346 54276264 ID=Msa0125710-mRNA-1:exon:16706;Parent=Msa0125710-mRNA-1
chr1_3 exon 54276612 54276760 54276612 ID=Msa0125710-mRNA-1:exon:16705;Parent=Msa0125710-mRNA-1
chr1_3 exon 54276849 54276938 54276849 ID=Msa0125710-mRNA-1:exon:16704;Parent=Msa0125710-mRNA-1
chr1_3 exon 54277045 54277100 54277045 ID=Msa0125710-mRNA-1:exon:16703;Parent=Msa0125710-mRNA-1
chr1_3 exon 54277233 54277400 54277233 ID=Msa0125710-mRNA-1:exon:16702;Parent=Msa0125710-mRNA-1
chr1_3 exon 54278606 54278767 54278606 ID=Msa0125710-mRNA-1:exon:16701;Parent=Msa0125710-mRNA-1
chr1_3 exon 54278841 54278961 54278841 ID=Msa0125710-mRNA-1:exon:16700;Parent=Msa0125710-mRNA-1
chr1_3 exon 54279048 54279143 54279048 ID=Msa0125710-mRNA-1:exon:16699;Parent=Msa0125710-mRNA-1
chr1_3 exon 54279236 54279449 54279236 ID=Msa0125710-mRNA-1:exon:16698;Parent=Msa0125710-mRNA-1
chr1_3 exon 54279579 54279912 54279579 ID=Msa0125710-mRNA-1:exon:16697;Parent=Msa0125710-mRNA-1
chr1_3 five_prime_UTR 54279739 54279912 54279739 ID=Msa0125710-mRNA-1:five_prime_utr;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54279579 54279738 54279579 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54279236 54279449 54279236 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54279048 54279143 54279048 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54278841 54278961 54278841 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54278606 54278767 54278606 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54277233 54277400 54277233 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54277045 54277100 54277045 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54276849 54276938 54276849 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54276612 54276760 54276612 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54276264 54276346 54276264 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54276044 54276175 54276044 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54275843 54275917 54275843 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54274450 54274618 54274450 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54273390 54273490 54273390 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54273193 54273273 54273193 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54272596 54272779 54272596 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54272358 54272455 54272358 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54272103 54272222 54272103 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54271664 54271799 54271664 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54271239 54271372 54271239 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54270990 54271056 54270990 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54270742 54270901 54270742 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54269870 54269939 54269870 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54269540 54269689 54269540 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54269390 54269455 54269390 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54269199 54269303 54269199 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54268801 54268890 54268801 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54267415 54267617 54267415 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54267132 54267330 54267132 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54266840 54267022 54266840 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54266562 54266657 54266562 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54266392 54266459 54266392 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54265964 54266309 54265964 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54265057 54265272 54265057 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54264063 54264710 54264063 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54263583 54263974 54263583 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54263081 54263261 54263081 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54262555 54262725 54262555 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 CDS 54262203 54262436 54262203 ID=Msa0125710-mRNA-1:cds;Parent=Msa0125710-mRNA-1
chr1_3 three_prime_UTR 54262028 54262202 54262028 ID=Msa0125710-mRNA-1:three_prime_utr;Parent=Msa0125710-mRNA-1
Gene Sequence

>Msa0125710

ATGGCAAATTCCTTGGCTTCTCAATTACAAGCTATCAGATCCATAGCACTTACTGATTCCGCACCTCAAAAGCGACCGTTCACTCGTCCTTCTATCTTGTTCGATCCTAAAGAAGCCGCTGATAAGAGTACTGAATCCATTTACACCATCGCTGCTCAAGGATTGGAGGTTCTGATTAGCACCGATGAAAGGTTTAGGAATTATAAGAATAGTTTGTTCAGTCCCCAGAGTAAAGAATTGGATAGAGGGTTAAAGACAGAAGACGAGAATAAACAACTTAATTCTTTGATTAATCCGTATTTGAAACTACTTTCTGGATATTTTAATCTTCCGGCTGCACTTCAAACGCTCGAGTATTTGATACGTGTATACAAGATACATGAGCACAATGTTGAGGATTTGATTTTGTGTGCATTGCCGTACCACGACACACATGCATTTGTTCGTGTAGTACAGATACTTAACATACGGAATGGTATATGGGAGTTTCTTAAAGGTGTGAAAGACTCGGGTGCAACACTACCTAGAATGGTTATAGTGCAGCAATGTCTTCGTGATTGTGGTGTATTATTAAAAAAATTATGCGACTATGCATCTCCATCCAAAAATCCTTCAAAGAATGTAATTGGCTTTTGTACTGCTGTTGTTGTTGAAGTTTTGGGTGTGAGGGTTGATGAAGATATTGTCAAAATCATATATCCTTTCGTGAATTCTGGTCTTCAGCCTGATAAGAAGGATCTTTCAGATCACAAGGCAAGTTCATTGATGATAGTTTGCTTGCTTGGACATAAAACAACATTAGCTCCATCACTTTTGAATGGTTTGATACGTTCAGTTGCCGGGATTGCTCGTGCTTGTGAGGAGGCTAAAAATCTTCATTGGTTTCGGTTGTCCCTTATTGCCTTAATCAATCTTGTCCAGTCCCAAAATGTTGACACACTTCCAACGAAGGCCTTGGATGTTTTAAAGAAACTAAGGGATTTGCCTGGGGTTTTATTAGAATTGTCTAAGGAGTTCAACATTGAAAAGTTTCTCGTTGTTCTGTTGGACTCCCTAATTATCTGCAGTTCTAAGGATGAAGACTGCCAGCAGGCTTTGCTGTCCTTGATAGAAAAGGTCCCCATAAATGACTCTGTTCATCATGTGGTTACCAAGATCCTATCAACTTGTGTGAAACTATCAGAAAAAGTTGGTGACTCAACATCTTCGATGTCAGCTGGCTGGGCAAAAGAGACTCTGAAAATTGTTGATATGAAGTATCCTTCTGAACTCCGTGCAGCAGTTCATCATTTTCTTCAGCAGCATAACGCAGCACATTCTAAGAAAGACAATTCATTGTATAAGATTTTATGTAAGATGTTGGATGGCAATTTGAATTCATCATCTGATATCTCGATGTCAAAAATTTGGTTTGGCTTGTATCATCCAAAGGCTGATATTAGACGTACTACACTGCTTGATATAAATTCTTCGGGCATCTTGAAAAACAAGGCATTTGTTTCAGAGGGTCTTATTGACATCCTAGAGGCCATATTGAGACAGTTTGATGATGAAGATCTAACAGTTGTTCAAGCAGCTTTAAATGTCGATGGCTTGGAAAACGTACCAGATTCTTCTAAGCTTCTTGAGGCACTGCAAAATGTGCTAAGAAGATGTGTTGGCAAGCTGCTGTCTGTTGCTGTCACTTGTCTAAAGAAAGCCATATCATACTTCCATGATCAGTACTTGGAAAGCATCGCTGCCATGATTTATCCATTACTCCTTGCTATGCCACAGACACAGGACTTAAATTTAAAAGCTCTGGTACTAGTCAAAGAAATTAACTGGCAACTTTATGATAATATTGCTGAAGAAACGACATCGATACCTGGATGTTTATCTTCAATTAACTTGAAGGTTATCGAAAAATTGGCTGGCAATTTCATGGTCCACCATGAAGATAATATCGATTGGTTTGTTAAAAGCTGCAATGATACAAAATTGTCAAAGACACTATTCTTTTTTGTTCTATTGCAGTCTCTTGTGCTGATAAAACCAAAAGGTGATAATGACTTTTCTGCACTGTTTGAAAGTGTGTTTCCTATTCTGAAGGCTGAGTGGGAATCTTCAGTGAATGCTGGTGATGTTCTTTTGGACGAGTGCATTCTTGATCAGCTTTTGTATGCCAAACTCGGACCTCTAAATGCAAAAGTTATGGCTTGCATATTTTGGAGGCTGATTAAAGCACTAGTGCCAGATAAATCATCAGGCAATCTACTGGATGATAGCAAGATAAAGGATCTGTTTGTATTTTTCGCTTTGTCAAAGTTCGGAAATGCTTTCCATGAACACCTCCATTTCTTAGCAGCACAGTTCAGATCTGCCCACCTATTATCCAAGTTTTTTACAGACGAAGGTGTTCCTGCTGTAGTCCAAGTTGAAAGTCTCCAGTGCTATGGATCTCTTTGTACTCTGCAGCAAAATGGATGTCAAACTGATATTTTGGCCGAATTTCCTTCTCTTCTTGTTCCATTGGCCGGTGATGATCAGTCTGTAAGGGTTGCTTCCATGGAGTGTATTGTTAAGTTACACGCCTTGCGGGGTCGCATTGAACATGGGTTCCAGTTTCTGGAAGAACTTCTAATTGCGTTGGTTCAGATAAAAAAACTTATATTGTCTGACAAGAAAATTCTCACAGCGTTGTTCACGTCCTCACTGGGGTCCACACCGGGCTCGTCCTATCATAATATCCTATTACCTCCAAATATGCAAAACAGGTTTGCTAAAAAAGAAGAAATACTTGAGTTCATTTTGGGTTATACTGGGAAATTCTCCAACTACGGGAAGCTAGTGATTCTCTCCTTGCTCAAGGGAATTGGGCATCCTAAAATATCATCAATGCTGTCTAATTTAATGGAGCGATACTATAATAAACACGGCAATTCTTTCCAGAAATTTTCAAACACTGAAACTAGGATGCTGTGTCTTTTGTTGGAGAACTGTGTAATGTCTTCTCCTTCAGGTGGAGATGATCTTCAAAACTCTTTACAGAAAGTGTTGCAGTTGGATGGCATGACTTCAGACAACCCTGCTTATGTAGAGCCTTGCATCACTGTCTTGAAAAAGCTTAATAGTCAATTCTACACGGGGTTGCAGGATAAAGCAAAGGAGCAATTATGTCTTGCACTTGTGTTTCTGTGCCGTAATGCTAATGGTGATGTACAAATTGCAACTAGAGAGGCCTTGATGCGCATAAATATAGATTTCAAAACTGTTGGCCGCATACTTGACCTCATACTTGCACCAAAGTGTGGCAAAATTAGGTCAGCAGACAAAAAGAGACAGAAATTGACAACACATCATGAAGAAGAACTTGATGACATATGCAGAATAGATAATCTGGTCGACAGTCTTAGTTCCCTTCTTGATGTTTTGTTACTGAAGAAAGACATAACAAACAGGCATTCTCTCTTAGACCCTTTATTTAAACTTCTTAGCGAAGTATTTTCAGAAGAATGGGTAAATGACGCACTTTCCCTTGAGGAAGGATCATCCCAACCGCCGTCAAGTCTTTCCGAAACTGTAAATCATATTCAACAGACTCTATTGATAATCCTGGAGGATATAATCATGTCTCATGATAGCATGGCTGTGCTAAATGAAAAAATGACTAATGAGATTAATATTAAGCTACTGATAGAGTTTGCCCGGACTACCGATGTTGTTGTCACCCGCAACCATATATTTTCTCTGCTTTCTGCTGTCATTAGAGTCTTACCAGAAAAAGTGTTTGGGCATCTAATTGATATTCTTCCAGTTATTGGAGAATCAGCTGTCACACAGATCGACAGTCATTCAAAGCATGTATTTGAGGATCTTATATCTGCGATTGTTCCTTGTTGGCTGTCTAAGACAGATGATGTGGAGAAATTACTGAAGGTTTTCATAGATATATTTCCTGAAATTGTTGAGCACAGAAGGCTATCAATTGTTTTATATCTCCTACGAACTTTGGGTGAGGGTAAAAAATGCTTGGCCTCATTACTTATATTGTTGTTCACTTCCTTAGTTTCAAGGAAAGCCACCTGTTTCCTCAATATTGAGACGCCAGATGCTTTAACATTTTGTACTATAGAGTGGGAATATAAATTAGCAGTGCAGATTTGTGAACAGTATACAAGTATGACTTGGCTTCCTTCTTTAGTTTCCTTTTATGAACAGAGAGGAAATAAAAATGTTGACCAGTCAATGTTTCTGGAGTTGTTTCTGGCAATGCGATTTTGTTTGCAGAAGTTGCAAGATCCTGAATTGTTGTTCAAACTAGAATCAGGAGAAGGCTCTCTTGTCATTCAGAGTCAACTCGGAGAGCTTATGGAACGTGTTGTTTTCCTCTTGCATCTTGTAGATGCAAGAAAAAAGGAACTAAATTTCTCTGTCATTGTGAGGAAAGAGTTGAAGGAAACTATGCGCGCTGTTGTGAGGAATATAACAATGGTTATGAGTCCTTCGATATACTTCAAGAGCATAATTAATTTGCTCGATCATTCAGATAAAGATGTTGGAGAAAAGGCTCTTGGGCTGTTATGTGATGCTGCAAGAAATCATGTAACAGTCAGCTTAACGCCTAAAGGCAACAAAGGTTCAAGATCAAGATCAAGTTCTCGTTGGCTTCAATTGGATGAAAGTTCTCAAGAATCACTTAATAATATGTGTTTAGAAATTCGTAAAGTCCTTGATGACGATTCATCAAACAACTCCTTGAAAGTGGCAGCAGTTTCAGCGTTGGAAGTTCTTGCAGAAAGTTTTCCTTCGAATAGTTCCACCTTCGTTGCATGCCTTGAATCTATTATTAGAAGATGCAATACATCTCAGAACTCTGCCGTGACTTCTAGTTGCCTTCGAACTTCCGCTGCGTTGATCAAAGTTCTTGGTCCAAAGGCACTGTCGAAACTTGATCAAATTATGACCGTGATAAAGTCCTCTAAGGATTTGGAACGAAAAGCTAACGATGTTTCCCCAGCCTCAAATGCACCCCATCTTGTTTCTGTTCTTGTTACTTTGGAGGCAGTTGTTGTCAAACTTGGTGGATTCCTAACTAAAGATTTAAAAAATATCATGGAGCTTCTGGTGCTTCGTCCAGAATTTGTCTCAGGAATAGATGCCAAAGTGGAATCCCGTGCTCATGGATTACGAAAGCTTCTTGCGGAAAAAATTCCAGTACGGCTTGCCCTGCCGCCATTGTTAGAAATATACCCAACTGCTGTTGAGGCTGGGGATAAAAGCTTAACAATTGTGTTTGATATGTTGGCAACATTTATTGGTACAATGGACAGATCATCTATTGTGGCATTCCATGGAAGGATTTTTGACTTTTGTTTGGTTGCTCTTGATCTTCGTCGAAGTCCTCATTCAGTTCAAAACATTGATTTAGTGGAAGAAGGTGTGAAGAATGCTATGCTTGCACTGACCCTAAAGCTTACAGAGAGCATGTTCAAGCCTCTTTTTATAAGGAGTATTGAGTGGGTAGTCGATGAAACTGTATCTTCAGGAAGCATGGATAGGGCCATATCTTTCTATGGCATGGTAAATAAGCTTGCTGAGAACCATCGGTCATTGTTTGTTCCTTACTTCAAATACTTGCTTAGTAACTGTGTTCATCATCTTGGCGATGGCGGAGACATTAAAATGTTTAGTTCGAGTCAGAAGAAAAAGAAGGCTAAGATTTTGGGTGACGGCGATGTAAAAGAAACAGATATCTTGTCTGTCAAGGGCTGGCATCTCAGGACACTAATGTTGTTGAAACCTATTGTTTCTCAACTTGATCTAGACCCACCTGCCTCGTTGGATGACCACATGAATATACCTAGCGTGACGGAATTTGATGACCTACTTGTTGTTTGCATCGGTCAAATGGCGGTCACAGCTGGCTCAGACCTTTTGTGGCAACCTCTGAACCGTGAAGTTTTGATGCAGACACAACGTACCGAGAAGACACGAGCTAGAATATTGGGTCTTAGAATTGTTAAATACCTTGTAGATAACTTGAAAGAAGAATATTCAGTGTTATTAGCTGAAACAATTCCCATCCTCGTTGAACTGCTTGAGGATGTGGAACTTTCAGTTAAATCTCTTGCACAGGAAATTCTGCAGGAAATAGAGTCTTTGAGTGGGGAGAGCCTTCGAGACTACCTATGA
Protein sequence

>Msa0125710

MANSLASQLQAIRSIALTDSAPQKRPFTRPSILFDPKEAADKSTESIYTIAAQGLEVLISTDERFRNYKNSLFSPQSKELDRGLKTEDENKQLNSLINPYLKLLSGYFNLPAALQTLEYLIRVYKIHEHNVEDLILCALPYHDTHAFVRVVQILNIRNGIWEFLKGVKDSGATLPRMVIVQQCLRDCGVLLKKLCDYASPSKNPSKNVIGFCTAVVVEVLGVRVDEDIVKIIYPFVNSGLQPDKKDLSDHKASSLMIVCLLGHKTTLAPSLLNGLIRSVAGIARACEEAKNLHWFRLSLIALINLVQSQNVDTLPTKALDVLKKLRDLPGVLLELSKEFNIEKFLVVLLDSLIICSSKDEDCQQALLSLIEKVPINDSVHHVVTKILSTCVKLSEKVGDSTSSMSAGWAKETLKIVDMKYPSELRAAVHHFLQQHNAAHSKKDNSLYKILCKMLDGNLNSSSDISMSKIWFGLYHPKADIRRTTLLDINSSGILKNKAFVSEGLIDILEAILRQFDDEDLTVVQAALNVDGLENVPDSSKLLEALQNVLRRCVGKLLSVAVTCLKKAISYFHDQYLESIAAMIYPLLLAMPQTQDLNLKALVLVKEINWQLYDNIAEETTSIPGCLSSINLKVIEKLAGNFMVHHEDNIDWFVKSCNDTKLSKTLFFFVLLQSLVLIKPKGDNDFSALFESVFPILKAEWESSVNAGDVLLDECILDQLLYAKLGPLNAKVMACIFWRLIKALVPDKSSGNLLDDSKIKDLFVFFALSKFGNAFHEHLHFLAAQFRSAHLLSKFFTDEGVPAVVQVESLQCYGSLCTLQQNGCQTDILAEFPSLLVPLAGDDQSVRVASMECIVKLHALRGRIEHGFQFLEELLIALVQIKKLILSDKKILTALFTSSLGSTPGSSYHNILLPPNMQNRFAKKEEILEFILGYTGKFSNYGKLVILSLLKGIGHPKISSMLSNLMERYYNKHGNSFQKFSNTETRMLCLLLENCVMSSPSGGDDLQNSLQKVLQLDGMTSDNPAYVEPCITVLKKLNSQFYTGLQDKAKEQLCLALVFLCRNANGDVQIATREALMRINIDFKTVGRILDLILAPKCGKIRSADKKRQKLTTHHEEELDDICRIDNLVDSLSSLLDVLLLKKDITNRHSLLDPLFKLLSEVFSEEWVNDALSLEEGSSQPPSSLSETVNHIQQTLLIILEDIIMSHDSMAVLNEKMTNEINIKLLIEFARTTDVVVTRNHIFSLLSAVIRVLPEKVFGHLIDILPVIGESAVTQIDSHSKHVFEDLISAIVPCWLSKTDDVEKLLKVFIDIFPEIVEHRRLSIVLYLLRTLGEGKKCLASLLILLFTSLVSRKATCFLNIETPDALTFCTIEWEYKLAVQICEQYTSMTWLPSLVSFYEQRGNKNVDQSMFLELFLAMRFCLQKLQDPELLFKLESGEGSLVIQSQLGELMERVVFLLHLVDARKKELNFSVIVRKELKETMRAVVRNITMVMSPSIYFKSIINLLDHSDKDVGEKALGLLCDAARNHVTVSLTPKGNKGSRSRSSSRWLQLDESSQESLNNMCLEIRKVLDDDSSNNSLKVAAVSALEVLAESFPSNSSTFVACLESIIRRCNTSQNSAVTSSCLRTSAALIKVLGPKALSKLDQIMTVIKSSKDLERKANDVSPASNAPHLVSVLVTLEAVVVKLGGFLTKDLKNIMELLVLRPEFVSGIDAKVESRAHGLRKLLAEKIPVRLALPPLLEIYPTAVEAGDKSLTIVFDMLATFIGTMDRSSIVAFHGRIFDFCLVALDLRRSPHSVQNIDLVEEGVKNAMLALTLKLTESMFKPLFIRSIEWVVDETVSSGSMDRAISFYGMVNKLAENHRSLFVPYFKYLLSNCVHHLGDGGDIKMFSSSQKKKKAKILGDGDVKETDILSVKGWHLRTLMLLKPIVSQLDLDPPASLDDHMNIPSVTEFDDLLVVCIGQMAVTAGSDLLWQPLNREVLMQTQRTEKTRARILGLRIVKYLVDNLKEEYSVLLAETIPILVELLEDVELSVKSLAQEILQEIESLSGESLRDYL*